view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VPS13D_chr1_12225030_12517047 | 12510525 | C | CTGTGTG | 3_prime_UTR_variant | MODIFIER | HG01243.hp1 HG01243.hp2 HG01361.hp1 others(4): Show |
a0001 | a0001c0001a0001c0008a0001c0012 | a0001c0001t0004a0001c0001t0010a0001c0008t0003others(1): Show | a0001c0001t0004g0148 a0001c0001t0010g0120 a0001c0008t0003g0008 others(4): Show |
7 | 94 | 0.0745 | 6 | c.*15 others(17): Show |
VPS13D | ENSG00000048707.15 | transcript | ENST00000620676.6 | protein_coding | 70/70 | 1532 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
VPS16_chr20_2835745_2871732 | 2845007 | G | GGTGTGT | intron_variant | MODIFIER | HG00642.hp1 HG01167.hp1 HG01496.hp1 others(17): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0003t0002a0001c0004t0001 | a0001c0001t0001g0012 a0001c0001t0001g0048 a0001c0001t0001g0049 others(14): Show |
20 | 136 | 0.1471 | 6 | c.53+ others(21): Show |
VPS16 | ENSG00000215305.10 | transcript | ENST00000380445.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
VPS16_chr20_2835745_2871732 | 2854960 | A | ATTTTTT | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(180): Show |
a0001a0002a0004others(7): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(12): Show | a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0025 others(153): Show |
183 | 241 | 0.7593 | 6 | c.54- others(21): Show |
VPS16 | ENSG00000215305.10 | transcript | ENST00000380445.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
VPS26A_chr10_69119178_69179412 | 69151264 | C | CAAAAAA | intron_variant | MODIFIER | HG02055.hp1 HG02615.hp2 HG02809.hp2 others(3): Show |
a0001 | a0001c0003 | a0001c0003t0007 | a0001c0003t0007g0266 a0001c0003t0007g0268 a0001c0003t0007g0269 others(3): Show |
6 | 263 | 0.0228 | 6 | c.154 others(23): Show |
VPS26A | ENSG00000122958.15 | transcript | ENST00000263559.11 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
VPS26A_chr10_69119178_69179412 | 69160127 | T | TACACAC | intron_variant | MODIFIER | HG02486.hp2 HG03098.hp1 HG03130.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0017 | a0001c0001t0002g0108 a0001c0001t0002g0119 a0001c0001t0002g0120 others(2): Show |
5 | 55 | 0.0909 | 6 | c.551 others(23): Show |
VPS26A | ENSG00000122958.15 | transcript | ENST00000263559.11 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
VPS26A_chr10_69119178_69179412 | 69173931 | T | TTGTTGC | 3_prime_UTR_variant | MODIFIER | HG01884.hp1 HG02258.hp1 HG02572.hp2 others(8): Show |
a0001 | a0001c0002 | a0001c0002t0008a0001c0002t0026 | a0001c0002t0008g0026 a0001c0002t0008g0027 a0001c0002t0008g0028 others(8): Show |
11 | 334 | 0.0329 | 6 | c.*26 others(17): Show |
VPS26A | ENSG00000122958.15 | transcript | ENST00000263559.11 | protein_coding | 9/9 | 2665 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
VPS26A_chr10_69119178_69179412 | 69174629 | A | AAAAAAC | downstream_gene_variant | MODIFIER | HG00741.hp1 HG01106.hp2 HG02738.hp2 others(8): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(1): Show | a0001c0001t0001g0190 a0001c0001t0001g0193 a0001c0001t0001g0202 others(8): Show |
11 | 106 | 0.1038 | 6 | c.*33 others(17): Show |
VPS26A | ENSG00000122958.15 | transcript | ENST00000263559.11 | protein_coding | 218 | chr10 | TogoVar | |||||||
VPS26B_chr11_134219671_134252788 | 134240794 | C | CGTGTGT | intron_variant | MODIFIER | HG00438.hp2 HG00597.hp1 HG01192.hp1 others(45): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0004 a0001c0001t0001g0045 a0001c0001t0001g0088 others(22): Show |
48 | 205 | 0.2341 | 6 | c.545 others(21): Show |
VPS26B | ENSG00000151502.11 | transcript | ENST00000281187.10 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
VPS26C_chr21_37218422_37272334 | 37228927 | G | GGAGGCA | intron_variant | MODIFIER | HG01106.hp2 HG01109.hp1 HG02145.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0191 a0001c0001t0001g0204 a0001c0001t0001g0205 others(7): Show |
10 | 394 | 0.0254 | 6 | c.508 others(21): Show |
VPS26C | ENSG00000157538.14 | transcript | ENST00000309117.11 | protein_coding | 5/7 | chr21 | TogoVar | |||||||
VPS26C_chr21_37218422_37272334 | 37255851 | A | ATTTTTT | intron_variant | MODIFIER | HG00423.hp2 HG00733.hp1 HG02080.hp1 others(13): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0002c0002t0003 | a0001c0001t0001g0061 a0001c0001t0001g0293 a0001c0001t0003g0007 others(10): Show |
16 | 61 | 0.2623 | 6 | c.57+ others(23): Show |
VPS26C | ENSG00000157538.14 | transcript | ENST00000309117.11 | protein_coding | 1/7 | chr21 | TogoVar | |||||||
VPS33A_chr12_122224564_122271494 | 122238770 | T | TACACAC | intron_variant | MODIFIER | HG01109.hp1 HG01516.hp2 HG01517.hp1 others(11): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0014a0001c0001t0016others(1): Show | a0001c0001t0001g0022 a0001c0001t0001g0088 a0001c0001t0001g0227 others(10): Show |
14 | 124 | 0.1129 | 6 | c.116 others(21): Show |
VPS33A | ENSG00000139719.11 | transcript | ENST00000267199.9 | protein_coding | 9/12 | chr12 | TogoVar | |||||||
VPS33A_chr12_122224564_122271494 | 122248060 | C | CTGTGTG | intron_variant | MODIFIER | HG01243.hp1 HG01884.hp1 HG02257.hp2 others(19): Show |
a0001a0003 | a0001c0001a0001c0005a0003c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 others(17): Show |
22 | 157 | 0.1401 | 6 | c.775 others(23): Show |
VPS33A | ENSG00000139719.11 | transcript | ENST00000267199.9 | protein_coding | 6/12 | chr12 | TogoVar | |||||||
VPS33A_chr12_122224564_122271494 | 122267207 | C | CTTTTTT | upstream_gene_variant | MODIFIER | HG00735.hp2 HG01099.hp2 HG01123.hp2 others(37): Show |
a0001 | a0001c0001a0001c0003a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 others(33): Show |
40 | 44 | 0.9091 | 6 | c.-80 others(15): Show |
VPS33A | ENSG00000139719.11 | transcript | ENST00000267199.9 | protein_coding | 714 | chr12 | TogoVar | |||||||
VPS33B_chr15_90993673_91027594 | 91009300 | C | CTCTCTT | intron_variant | MODIFIER | HG00735.hp2 HG01123.hp1 HG01175.hp1 others(48): Show |
a0001 | a0001c0001a0001c0004a0001c0005others(4): Show | a0001c0001t0001a0001c0004t0001a0001c0005t0001others(5): Show | a0001c0001t0001g0019 a0001c0001t0001g0044 a0001c0001t0001g0052 others(36): Show |
51 | 250 | 0.2040 | 6 | c.403 others(21): Show |
VPS33B | ENSG00000184056.15 | transcript | ENST00000333371.8 | protein_coding | 6/22 | chr15 | TogoVar | |||||||
VPS33B_chr15_90993673_91027594 | 91017367 | A | AATATAT | intron_variant | MODIFIER | HG00741.hp1 HG00741.hp2 HG01069.hp1 others(4): Show |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0020 a0002c0002t0002g0252 a0002c0002t0002g0253 others(2): Show |
7 | 134 | 0.0522 | 6 | c.178 others(21): Show |
VPS33B | ENSG00000184056.15 | transcript | ENST00000333371.8 | protein_coding | 2/22 | chr15 | TogoVar | |||||||
VPS35L_chr16_19550703_19706163 | 19570834 | C | CATATAT | intron_variant | MODIFIER | HG00733.hp2 HG03239.hp2 HG04204.hp1 |
a0001 | a0001c0001a0001c0002a0001c0007 | a0001c0001t0001a0001c0002t0001a0001c0007t0002 | a0001c0001t0001g0158 a0001c0002t0001g0258 a0001c0007t0002g0143 |
3 | 21 | 0.1429 | 6 | c.285 others(23): Show |
VPS35L | ENSG00000103544.17 | transcript | ENST00000417362.7 | protein_coding | 3/30 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS35L_chr16_19550703_19706163 | 19615968 | A | AAATAAT | intron_variant | MODIFIER | HG02071.hp2 HG02135.hp1 HG02135.hp2 others(8): Show |
a0001a0006 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(3): Show | a0001c0001t0001g0129 a0001c0001t0003g0275 a0001c0002t0001g0037 others(8): Show |
11 | 78 | 0.1410 | 6 | c.102 others(23): Show |
VPS35L | ENSG00000103544.17 | transcript | ENST00000417362.7 | protein_coding | 12/30 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS35L_chr16_19550703_19706163 | 19674172 | T | TTTTTTC | intron_variant | MODIFIER | HG02109.hp1 HG02135.hp2 HG02559.hp2 others(11): Show |
a0001 | a0001c0001a0001c0003a0001c0008 | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(2): Show | a0001c0001t0001g0115 a0001c0001t0001g0145 a0001c0001t0001g0165 others(11): Show |
14 | 239 | 0.0586 | 6 | c.236 others(25): Show |
VPS35L | ENSG00000103544.17 | transcript | ENST00000417362.7 | protein_coding | 27/30 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS35_chr16_46651132_46694178 | 46681032 | T | TACACAC | intron_variant | MODIFIER | HG02723.hp2 HG02818.hp1 HG03471.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0011 | a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0011g0024 |
3 | 29 | 0.1034 | 6 | c.324 others(21): Show |
VPS35 | ENSG00000069329.19 | transcript | ENST00000299138.12 | protein_coding | 4/16 | chr16 | TogoVar | |||||||
VPS36_chr13_52407606_52455634 | 52436218 | A | AACACAC | intron_variant | MODIFIER | HG01106.hp1 HG01884.hp2 HG01952.hp1 others(7): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0007 | a0001c0001t0001g0005 a0001c0001t0001g0047 a0001c0001t0001g0069 others(4): Show |
10 | 131 | 0.0763 | 6 | c.351 others(19): Show |
VPS36 | ENSG00000136100.14 | transcript | ENST00000378060.9 | protein_coding | 4/13 | chr13 | TogoVar | |||||||
VPS37A_chr8_17241958_17303024 | 17267467 | T | TTGTGTG | intron_variant | MODIFIER | HG00544.hp1 HG00673.hp2 HG01943.hp2 others(26): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0028a0001c0001t0029others(1): Show | a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0015 others(22): Show |
29 | 36 | 0.8056 | 6 | c.201 others(21): Show |
VPS37A | ENSG00000155975.10 | transcript | ENST00000324849.9 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS37A_chr8_17241958_17303024 | 17267467 | T | TTTTGTG | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00558.hp2 others(67): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0011others(13): Show | a0001c0001t0002g0295 a0001c0001t0002g0296 a0001c0001t0002g0297 others(62): Show |
70 | 77 | 0.9091 | 6 | c.201 others(21): Show |
VPS37A | ENSG00000155975.10 | transcript | ENST00000324849.9 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS37A_chr8_17241958_17303024 | 17277861 | T | TACACAC | intron_variant | MODIFIER | HG00438.hp1 HG00544.hp2 HG00673.hp1 others(15): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0013a0001c0001t0048others(3): Show | a0001c0001t0004g0003 a0001c0001t0004g0165 a0001c0001t0004g0166 others(12): Show |
18 | 130 | 0.1385 | 6 | c.713 others(23): Show |
VPS37A | ENSG00000155975.10 | transcript | ENST00000324849.9 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS39_chr15_42153701_42213304 | 42199981 | C | CAAAACA | intron_variant | MODIFIER | HG02572.hp2 HG03225.hp1 HG03471.hp1 |
a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0031 a0001c0002t0005g0032 a0001c0002t0005g0033 |
3 | 278 | 0.0108 | 6 | c.74- others(17): Show |
VPS39 | ENSG00000166887.16 | transcript | ENST00000318006.10 | protein_coding | 1/24 | chr15 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38720548 | G | GTATGTA | downstream_gene_variant | MODIFIER | HG02622.hp2 HG03130.hp2 NA18988.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0026a0001c0001t0030 | a0001c0001t0013g0080 a0001c0001t0013g0081 a0001c0001t0026g0245 others(1): Show |
4 | 246 | 0.0163 | 6 | c.*56 others(17): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 2425 | chr7 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38756213 | T | TACACAC | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00423.hp2 others(65): Show |
a0001 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(22): Show | a0001c0001t0003g0066 a0001c0001t0003g0167 a0001c0001t0003g0223 others(63): Show |
68 | 139 | 0.4892 | 6 | c.169 others(23): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 19/28 | chr7 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38815924 | C | CTATATA | intron_variant | MODIFIER | HG00423.hp1 HG00673.hp1 HG02155.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0027others(1): Show | a0001c0001t0001g0025 a0001c0001t0005g0036 a0001c0001t0005g0038 others(5): Show |
8 | 32 | 0.2500 | 6 | c.450 others(23): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 7/28 | chr7 | TogoVar | |||||||
VPS45_chr1_150062776_150150329 | 150088434 | A | AATATAT | intron_variant | MODIFIER | HG01069.hp1 HG01069.hp2 HG01071.hp1 others(17): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0002c0002t0001a0002c0002t0002others(1): Show | a0001c0001t0001g0019 a0001c0001t0001g0023 a0001c0001t0001g0024 others(17): Show |
20 | 111 | 0.1802 | 6 | c.110 others(25): Show |
VPS45 | ENSG00000136631.16 | transcript | ENST00000644510.2 | protein_coding | 10/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
VPS45_chr1_150062776_150150329 | 150117212 | A | AAATAAT | intron_variant | MODIFIER | HG01891.hp2 HG02630.hp2 HG02723.hp2 others(7): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0002 | a0002c0002t0001g0006 a0002c0002t0001g0007 a0002c0002t0001g0008 others(7): Show |
10 | 174 | 0.0575 | 6 | c.162 others(25): Show |
VPS45 | ENSG00000136631.16 | transcript | ENST00000644510.2 | protein_coding | 14/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
VPS45_chr1_150062776_150150329 | 150140386 | G | GGTGTGT | intron_variant | MODIFIER | HG01168.hp2 HG01884.hp2 HG02572.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0024 a0001c0001t0001g0037 a0001c0001t0001g0076 others(9): Show |
12 | 59 | 0.2034 | 6 | c.162 others(25): Show |
VPS45 | ENSG00000136631.16 | transcript | ENST00000644510.2 | protein_coding | 14/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
VPS4A_chr16_69306350_69331939 | 69310070 | G | GTTTTTT | upstream_gene_variant | MODIFIER | HG01074.hp1 HG01517.hp1 HG01978.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0022 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0036 others(3): Show |
7 | 40 | 0.1750 | 6 | c.-14 others(17): Show |
VPS4A | ENSG00000132612.16 | transcript | ENST00000254950.13 | protein_coding | 1279 | chr16 | TogoVar | |||||||
VPS4A_chr16_69306350_69331939 | 69323943 | C | CAAAAAA | intron_variant | MODIFIER | HG02451.hp2 HG02602.hp1 HG02630.hp1 others(13): Show |
a0001 | a0001c0002 | a0001c0002t0006a0001c0002t0007 | a0001c0002t0006g0018 a0001c0002t0006g0028 a0001c0002t0006g0102 others(9): Show |
16 | 291 | 0.0550 | 6 | c.121 others(23): Show |
VPS4A | ENSG00000132612.16 | transcript | ENST00000254950.13 | protein_coding | 10/10 | chr16 | TogoVar | |||||||
VPS4B_chr18_63384190_63427476 | 63387072 | T | TCACACA | downstream_gene_variant | MODIFIER | HG01070.hp2 HG01071.hp2 HG01256.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0177 a0001c0001t0002g0003 a0001c0001t0002g0006 |
5 | 216 | 0.0231 | 6 | c.*39 others(17): Show |
VPS4B | ENSG00000119541.10 | transcript | ENST00000238497.10 | protein_coding | 2117 | chr18 | TogoVar | |||||||
VPS4B_chr18_63384190_63427476 | 63387072 | T | TCTCACA | downstream_gene_variant | MODIFIER | HG01123.hp1 HG01256.hp2 HG01981.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0148 a0001c0001t0001g0151 others(1): Show |
4 | 215 | 0.0186 | 6 | c.*39 others(17): Show |
VPS4B | ENSG00000119541.10 | transcript | ENST00000238497.10 | protein_coding | 2117 | chr18 | TogoVar | |||||||
VPS4B_chr18_63384190_63427476 | 63387112 | A | ACACACC | downstream_gene_variant | MODIFIER | HG00673.hp1 HG02027.hp1 HG02109.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0011 others(10): Show |
14 | 273 | 0.0513 | 6 | c.*38 others(17): Show |
VPS4B | ENSG00000119541.10 | transcript | ENST00000238497.10 | protein_coding | 2077 | chr18 | TogoVar | |||||||
VPS50_chr7_93227366_93366123 | 93228885 | G | GTGTGTA | upstream_gene_variant | MODIFIER | HG01074.hp2 HG01167.hp1 HG01169.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0004 a0001c0001t0010g0107 a0001c0001t0010g0119 |
4 | 277 | 0.0144 | 6 | c.-35 others(17): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 3480 | chr7 | TogoVar | |||||||
VPS50_chr7_93227366_93366123 | 93240217 | G | GCACACA | intron_variant | MODIFIER | HG00423.hp1 HG00621.hp2 HG00733.hp2 others(48): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0003 a0001c0001t0001g0026 a0001c0001t0001g0027 others(47): Show |
51 | 221 | 0.2308 | 6 | c.102 others(21): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
VPS50_chr7_93227366_93366123 | 93240249 | A | ACACTCT | intron_variant | MODIFIER | HG00408.hp1 HG02896.hp1 NA18979.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0002t0030 | a0001c0001t0005g0126 a0001c0001t0005g0131 a0001c0001t0005g0135 others(1): Show |
4 | 231 | 0.0173 | 6 | c.102 others(21): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
VPS50_chr7_93227366_93366123 | 93305450 | G | GTTTTAC | intron_variant | MODIFIER | HG02055.hp1 HG02145.hp2 HG02257.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0013 | a0001c0001t0009g0250 a0001c0001t0009g0253 a0001c0001t0009g0254 others(5): Show |
8 | 314 | 0.0255 | 6 | c.145 others(23): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 17/27 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
VPS50_chr7_93227366_93366123 | 93364410 | T | TCACACA | downstream_gene_variant | MODIFIER | HG02602.hp2 HG03225.hp1 HG03225.hp2 others(4): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0006a0001c0001t0009a0001c0001t0013others(3): Show | a0001c0001t0006g0013 a0001c0001t0009g0259 a0001c0001t0013g0251 others(4): Show |
7 | 175 | 0.0400 | 6 | c.*59 others(17): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 3288 | chr7 | TogoVar | |||||||
VPS50_chr7_93227366_93366123 | 93364410 | T | TCTCACA | downstream_gene_variant | MODIFIER | HG01243.hp1 HG01346.hp2 HG01361.hp2 others(20): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0012a0001c0002t0001a0001c0002t0002others(10): Show | a0001c0001t0012g0140 a0001c0002t0001g0095 a0001c0002t0002g0282 others(20): Show |
23 | 191 | 0.1204 | 6 | c.*59 others(17): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 3288 | chr7 | TogoVar | |||||||
VPS50_chr7_93227366_93366123 | 93364437 | C | CACACAG | downstream_gene_variant | MODIFIER | HG00639.hp2 HG02451.hp2 NA19240.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0002t0001g0262 |
3 | 295 | 0.0102 | 6 | c.*60 others(17): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 3315 | chr7 | TogoVar | |||||||
VPS52_chr6_33245278_33276876 | 33256463 | C | CAAAAAA | intron_variant | MODIFIER | HG00099.hp1 HG00642.hp1 HG01168.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0042 others(4): Show |
9 | 51 | 0.1765 | 6 | c.179 others(25): Show |
VPS52 | ENSG00000223501.9 | transcript | ENST00000445902.3 | protein_coding | 17/19 | chr6 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 515956 | C | CTTTTTT | 3_prime_UTR_variant | MODIFIER | HG00423.hp2 HG01099.hp1 HG01109.hp2 others(27): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0015a0001c0001t0085a0001c0001t0091others(13): Show | a0001c0001t0015g0130 a0001c0001t0015g0131 a0001c0001t0015g0135 others(27): Show |
30 | 99 | 0.3030 | 6 | c.*31 others(17): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 22/22 | 3171 | chr17 | TogoVar | ||||||
VPS53_chr17_503668_719839 | 529398 | T | TCACACA | intron_variant | MODIFIER | HG01081.hp2 HG01175.hp2 HG01192.hp2 others(5): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0002a0001c0001t0113a0001c0007t0012others(3): Show | a0001c0001t0002g0136 a0001c0001t0113g0230 a0001c0007t0012g0107 others(5): Show |
8 | 61 | 0.1311 | 6 | c.208 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 19/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 546329 | T | TCACACA | intron_variant | MODIFIER | HG01070.hp1 HG01167.hp1 HG01981.hp2 others(16): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0033a0001c0001t0092a0001c0001t0093others(16): Show | a0001c0001t0033g0119 a0001c0001t0092g0145 a0001c0001t0093g0146 others(16): Show |
19 | 44 | 0.4318 | 6 | c.186 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 17/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 571537 | C | CCCTTTT | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG01099.hp2 others(8): Show |
a0001 | a0001c0006a0001c0016 | a0001c0006t0001a0001c0006t0022a0001c0006t0025others(6): Show | a0001c0006t0001g0097 a0001c0006t0001g0113 a0001c0006t0022g0100 others(8): Show |
11 | 230 | 0.0478 | 6 | c.131 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 13/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 597949 | G | GCTCTCC | intron_variant | MODIFIER | HG01074.hp2 NA18747.hp2 NA18984.hp2 others(1): Show |
a0001 | a0001c0002a0001c0011 | a0001c0002t0001a0001c0002t0068a0001c0002t0074others(1): Show | a0001c0002t0001g0094 a0001c0002t0068g0093 a0001c0002t0074g0095 others(1): Show |
4 | 230 | 0.0174 | 6 | c.121 others(25): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 12/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 656700 | A | ATGTGTG | intron_variant | MODIFIER | HG02135.hp2 HG02602.hp1 NA18960.hp2 others(3): Show |
a0001 | a0001c0005 | a0001c0005t0010a0001c0005t0021a0001c0005t0046others(3): Show | a0001c0005t0010g0007 a0001c0005t0021g0006 a0001c0005t0046g0096 others(3): Show |
6 | 9 | 0.6667 | 6 | c.373 others(21): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 5/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 662773 | G | GAAAGAA | intron_variant | MODIFIER | HG00323.hp2 HG00621.hp1 HG02056.hp1 others(4): Show |
a0001a0002 | a0001c0002a0001c0005a0002c0003 | a0001c0002t0001a0001c0005t0044a0002c0003t0009others(4): Show | a0001c0002t0001g0094 a0001c0005t0044g0044 a0002c0003t0009g0218 others(4): Show |
7 | 161 | 0.0435 | 6 | c.286 others(21): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 4/21 | chr17 | TogoVar |