view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SYT16_chr14_61807703_62117550 | 61891242 | G | GCGCACA | intron_variant | MODIFIER | HG02622.hp1 HG02630.hp1 |
a0001a0004 | a0001c0001a0004c0006 | a0001c0001t0045a0004c0006t0044 | a0001c0001t0045g0020 a0004c0006t0044g0018 |
2 | 174 | 0.0115 | 6 | c.-32 others(27): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 61901741 | T | TATAATA | intron_variant | MODIFIER | HG01496.hp2 HG02015.hp1 NA18959.hp2 others(1): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0005a0003c0004t0002a0003c0004t0009others(1): Show | a0001c0001t0005g0003 a0003c0004t0002g0078 a0003c0004t0009g0130 others(1): Show |
4 | 174 | 0.0230 | 6 | c.-32 others(27): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 61913704 | T | TTGTGTG | intron_variant | MODIFIER | HG01074.hp2 HG01255.hp1 HG01256.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0024others(3): Show | a0001c0001t0001g0008 a0001c0001t0003g0022 a0001c0001t0024g0010 others(3): Show |
6 | 174 | 0.0345 | 6 | c.-32 others(27): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 61938026 | A | AACACAC | intron_variant | MODIFIER | HG02622.hp1 HG02630.hp1 HG02809.hp2 |
a0001a0004 | a0001c0001a0001c0002a0004c0006 | a0001c0001t0045a0001c0002t0046a0004c0006t0044 | a0001c0001t0045g0020 a0001c0002t0046g0006 a0004c0006t0044g0018 |
3 | 174 | 0.0172 | 6 | c.-32 others(27): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 61947267 | C | CGTGTGT | intron_variant | MODIFIER | HG00140.hp2 HG00639.hp1 HG00738.hp2 others(21): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0003a0001c0001t0006a0001c0001t0009others(19): Show | a0001c0001t0003g0033 a0001c0001t0003g0098 a0001c0001t0006g0137 others(21): Show |
24 | 174 | 0.1379 | 6 | c.-32 others(27): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 61991330 | T | TTGTGTG | intron_variant | MODIFIER | HG00639.hp2 HG00741.hp2 HG01168.hp1 others(38): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0038 a0001c0001t0001g0077 a0001c0001t0002g0074 others(38): Show |
41 | 174 | 0.2356 | 6 | c.-14 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62000099 | A | ATTTTTT | intron_variant | MODIFIER | HG01175.hp2 HG01515.hp2 HG01884.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0005a0001c0001t0007others(5): Show | a0001c0001t0003g0007 a0001c0001t0003g0035 a0001c0001t0003g0037 others(9): Show |
12 | 174 | 0.0690 | 6 | c.523 others(23): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62011870 | T | TACACAC | intron_variant | MODIFIER | HG00140.hp2 HG00735.hp2 HG00738.hp1 others(22): Show |
a0001a0007 | a0001c0001a0001c0005a0007c0010 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(12): Show | a0001c0001t0001g0054 a0001c0001t0001g0075 a0001c0001t0003g0035 others(22): Show |
25 | 174 | 0.1437 | 6 | c.523 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62011872 | T | TACACAC | intron_variant | MODIFIER | HG02683.hp2 HG03834.hp2 |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0009 | a0001c0002t0002g0159 a0001c0002t0009g0107 |
2 | 174 | 0.0115 | 6 | c.523 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62011926 | C | CATATAT | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp2 HG00738.hp1 others(29): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(12): Show | a0001c0001t0001g0008 a0001c0001t0001g0038 a0001c0001t0001g0054 others(29): Show |
32 | 174 | 0.1839 | 6 | c.523 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62018298 | C | CTTTTTT | intron_variant | MODIFIER | HG01433.hp1 HG02647.hp2 HG02965.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0010a0001c0002t0001a0001c0002t0003others(2): Show | a0001c0001t0010g0044 a0001c0002t0001g0092 a0001c0002t0003g0132 others(3): Show |
6 | 174 | 0.0345 | 6 | c.523 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62039834 | T | TACACAC | intron_variant | MODIFIER | HG00735.hp2 HG00738.hp1 HG02630.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0004a0001c0001t0007a0001c0001t0051others(3): Show | a0001c0001t0004g0126 a0001c0001t0007g0125 a0001c0001t0051g0162 others(3): Show |
6 | 174 | 0.0345 | 6 | c.524 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62078155 | C | CTCTATA | intron_variant | MODIFIER | HG01109.hp2 HG01175.hp1 NA19002.hp2 |
a0001a0002a0003 | a0001c0002a0002c0003a0003c0004 | a0001c0002t0028a0002c0003t0066a0003c0004t0057 | a0001c0002t0028g0148 a0002c0003t0066g0166 a0003c0004t0057g0165 |
3 | 174 | 0.0172 | 6 | c.994 others(23): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62078172 | A | AACACAC | intron_variant | MODIFIER | HG00438.hp2 HG00609.hp1 HG01433.hp1 others(33): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0009others(14): Show | a0001c0001t0002g0074 a0001c0001t0002g0088 a0001c0001t0005g0003 others(33): Show |
36 | 174 | 0.2069 | 6 | c.994 others(23): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62092173 | A | AACACAC | intron_variant | MODIFIER | HG00609.hp2 HG00735.hp1 HG00735.hp2 others(10): Show |
a0001a0002a0003 | a0001c0001a0001c0007a0002c0003others(1): Show | a0001c0001t0004a0001c0001t0007a0001c0001t0031others(8): Show | a0001c0001t0004g0144 a0001c0001t0004g0163 a0001c0001t0007g0125 others(10): Show |
13 | 174 | 0.0747 | 6 | c.162 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19171289 | T | TATGATG | intron_variant | MODIFIER | HG03704.hp2 HG03942.hp2 NA18945.hp2 others(7): Show |
a0001a0003 | a0001c0001a0003c0008 | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(2): Show | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0068 others(7): Show |
10 | 324 | 0.0309 | 6 | c.16- others(21): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19190768 | C | CTGTGTG | intron_variant | MODIFIER | HG01884.hp2 HG02257.hp2 HG02976.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0010a0001c0001t0019others(1): Show | a0001c0001t0005g0206 a0001c0001t0010g0056 a0001c0001t0019g0211 others(1): Show |
4 | 324 | 0.0124 | 6 | c.951 others(23): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19208884 | C | CTTTTTT | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(28): Show |
a0001 | a0001c0001a0001c0002a0001c0015 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0089 a0001c0001t0001g0112 a0001c0001t0001g0123 others(28): Show |
31 | 324 | 0.0957 | 6 | c.952 others(25): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19220303 | C | CTTTCTT | intron_variant | MODIFIER | HG01099.hp1 HG01256.hp2 HG01261.hp2 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0019 a0001c0001t0001g0090 a0001c0001t0001g0148 others(17): Show |
20 | 324 | 0.0617 | 6 | c.952 others(23): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19250359 | T | TTGTGTG | intron_variant | MODIFIER | HG00673.hp1 HG01099.hp1 HG01346.hp1 others(19): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0001g0093 a0001c0001t0001g0118 a0001c0001t0001g0149 others(19): Show |
22 | 324 | 0.0679 | 6 | c.122 others(27): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19256437 | A | AACACAC | intron_variant | MODIFIER | HG00140.hp2 HG00639.hp1 HG01256.hp2 others(30): Show |
a0001 | a0001c0001a0001c0002a0001c0009others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0011 a0001c0001t0001g0091 a0001c0001t0001g0104 others(30): Show |
33 | 324 | 0.1019 | 6 | c.122 others(27): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 78860345 | A | AAAAAAG | upstream_gene_variant | MODIFIER | HG01243.hp1 HG02647.hp2 HG02717.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0039 a0001c0001t0002g0017 a0001c0001t0003g0040 others(5): Show |
8 | 62 | 0.1290 | 6 | c.-49 others(17): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 4428 | chr12 | TogoVar | |||||||
SYT1_chr12_78859774_79457008 | 78860357 | G | GAAAGAA | upstream_gene_variant | MODIFIER | HG02559.hp1 HG02965.hp1 HG03195.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0006a0001c0002t0010 | a0001c0001t0006g0001 a0001c0002t0006g0007 a0001c0002t0010g0006 |
4 | 62 | 0.0645 | 6 | c.-49 others(17): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 4416 | chr12 | TogoVar | |||||||
SYT1_chr12_78859774_79457008 | 78902237 | T | TATAAAG | intron_variant | MODIFIER | HG02486.hp2 HG03098.hp1 |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0017 | a0001c0001t0009g0008 a0001c0001t0017g0023 |
2 | 62 | 0.0323 | 6 | c.-21 others(27): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 78955800 | T | TTGTGTG | intron_variant | MODIFIER | HG02145.hp1 HG03098.hp1 HG03098.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0002a0001c0001t0017a0001c0002t0001others(1): Show | a0001c0001t0002g0004 a0001c0001t0017g0023 a0001c0002t0001g0053 others(2): Show |
5 | 62 | 0.0807 | 6 | c.-21 others(27): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79026667 | T | TTATATA | intron_variant | MODIFIER | HG01261.hp2 HG02647.hp2 HG03098.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0005a0001c0002t0002 | a0001c0001t0002g0004 a0001c0001t0005g0011 a0001c0002t0002g0013 others(1): Show |
4 | 62 | 0.0645 | 6 | c.-83 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79122513 | C | CAAAAAA | intron_variant | MODIFIER | HG00621.hp1 HG00741.hp2 HG01256.hp1 others(18): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0022 a0001c0001t0001g0033 a0001c0001t0001g0058 others(18): Show |
21 | 62 | 0.3387 | 6 | c.-18 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79178931 | T | TATATAG | intron_variant | MODIFIER | HG02897.hp2 HG02965.hp1 HG03704.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0005a0001c0002t0010 | a0001c0002t0001g0029 a0001c0002t0005g0018 a0001c0002t0010g0006 |
3 | 62 | 0.0484 | 6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79179089 | T | TATATAG | intron_variant | MODIFIER | HG01978.hp2 HG03704.hp1 NA18952.hp2 |
a0001 | a0001c0002 | a0001c0002t0015a0001c0002t0018a0001c0002t0021 | a0001c0002t0015g0041 a0001c0002t0018g0044 a0001c0002t0021g0045 |
3 | 62 | 0.0484 | 6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79179309 | T | TATATAG | intron_variant | MODIFIER | HG01261.hp2 HG03195.hp2 NA19240.hp1 |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0006a0001c0002t0008 | a0001c0002t0002g0020 a0001c0002t0006g0007 a0001c0002t0008g0002 |
3 | 62 | 0.0484 | 6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79179460 | T | TATATAG | intron_variant | MODIFIER | HG01243.hp2 HG02922.hp2 |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0009 | a0001c0001t0007g0038 a0001c0001t0009g0016 |
2 | 62 | 0.0323 | 6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79194453 | G | GTTATTA | intron_variant | MODIFIER | HG02145.hp1 HG03195.hp1 |
a0001 | a0001c0003 | a0001c0003t0002a0001c0003t0014 | a0001c0003t0002g0005 a0001c0003t0014g0056 |
2 | 62 | 0.0323 | 6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79196149 | C | CTGTTGT | intron_variant | MODIFIER | HG01243.hp2 HG02257.hp2 HG02922.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0007a0001c0001t0009a0001c0002t0019 | a0001c0001t0007g0038 a0001c0001t0009g0016 a0001c0002t0019g0034 |
3 | 62 | 0.0484 | 6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79249088 | C | CTTTTTT | intron_variant | MODIFIER | HG00621.hp2 HG00741.hp1 HG01243.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(6): Show | a0001c0001t0001g0019 a0001c0001t0001g0027 a0001c0001t0001g0039 others(12): Show |
15 | 62 | 0.2419 | 6 | c.166 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79253483 | G | GTCTCTC | intron_variant | MODIFIER | HG02559.hp1 NA18952.hp1 NA18992.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0006a0001c0002t0001others(1): Show | a0001c0001t0004g0003 a0001c0001t0006g0001 a0001c0002t0001g0053 others(3): Show |
7 | 62 | 0.1129 | 6 | c.167 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79300789 | T | TTTTATA | intron_variant | MODIFIER | HG02486.hp1 HG03704.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0002t0001 | a0001c0001t0005g0042 a0001c0002t0001g0029 |
2 | 62 | 0.0323 | 6 | c.810 others(23): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79308612 | A | AAGAAAG | intron_variant | MODIFIER | HG02559.hp1 NA19056.hp1 NA20300.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0004 | a0001c0001t0006g0001 a0001c0002t0004g0051 |
3 | 62 | 0.0484 | 6 | c.810 others(23): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79313271 | T | TTTCTAA | intron_variant | MODIFIER | HG01261.hp2 HG03195.hp2 NA19240.hp1 |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0006a0001c0002t0008 | a0001c0002t0002g0020 a0001c0002t0006g0007 a0001c0002t0008g0002 |
3 | 62 | 0.0484 | 6 | c.810 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79349033 | A | AAGAAAG | intron_variant | MODIFIER | HG02257.hp2 NA18992.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0002t0019 | a0001c0001t0004g0003 a0001c0002t0019g0034 |
2 | 62 | 0.0323 | 6 | c.811 others(23): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79365834 | G | GAAAAAA | intron_variant | MODIFIER | HG00621.hp1 HG01256.hp2 HG01258.hp1 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(6): Show | a0001c0001t0001g0027 a0001c0001t0001g0046 a0001c0001t0001g0058 others(9): Show |
12 | 62 | 0.1936 | 6 | c.928 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79445990 | C | CATATAT | intron_variant | MODIFIER | HG01978.hp2 HG03516.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0018 | a0001c0001t0001g0019 a0001c0002t0018g0044 |
2 | 62 | 0.0323 | 6 | c.106 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT2_chr1_202585596_202715454 | 202594701 | T | TACACAC | 3_prime_UTR_variant | MODIFIER | HG01192.hp2 HG01884.hp1 HG01884.hp2 others(20): Show |
a0001 | a0001c0001a0001c0004a0001c0007 | a0001c0001t0110a0001c0004t0007a0001c0004t0014others(8): Show | a0001c0001t0110g0091 a0001c0004t0007g0045 a0001c0004t0007g0079 others(20): Show |
23 | 276 | 0.0833 | 6 | c.*20 others(17): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 9/9 | 2055 | chr1 | TogoVar | ||||||
SYT2_chr1_202585596_202715454 | 202596298 | C | CACACAT | 3_prime_UTR_variant | MODIFIER | HG01261.hp1 HG02572.hp1 HG02738.hp2 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0018a0001c0002t0050a0001c0002t0051 | a0001c0002t0018g0191 a0001c0002t0018g0235 a0001c0002t0018g0260 others(2): Show |
5 | 276 | 0.0181 | 6 | c.*45 others(15): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 9/9 | 458 | chr1 | TogoVar | ||||||
SYT2_chr1_202585596_202715454 | 202618400 | A | AGTGTGT | intron_variant | MODIFIER | HG00673.hp2 HG02056.hp1 HG02132.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0011a0001c0002t0016others(2): Show | a0001c0001t0001g0106 a0001c0002t0011g0151 a0001c0002t0016g0195 others(2): Show |
5 | 276 | 0.0181 | 6 | c.-17 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT2_chr1_202585596_202715454 | 202643318 | A | AGGGCGG | intron_variant | MODIFIER | HG02071.hp1 HG02132.hp1 NA19081.hp1 |
a0001 | a0001c0002a0001c0003 | a0001c0002t0005a0001c0003t0083a0001c0003t0093 | a0001c0002t0005g0015 a0001c0003t0083g0009 a0001c0003t0093g0111 |
3 | 276 | 0.0109 | 6 | c.-17 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT2_chr1_202585596_202715454 | 202691722 | G | GGGGAGA | intron_variant | MODIFIER | HG00408.hp1 HG00558.hp1 HG02258.hp1 others(6): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0004a0001c0001t0034a0001c0001t0046others(6): Show | a0001c0001t0004g0141 a0001c0001t0034g0090 a0001c0001t0046g0140 others(6): Show |
9 | 276 | 0.0326 | 6 | c.-18 others(25): Show |
SYT2 | ENSG00000143858.12 | transcript | ENST00000367268.5 | protein_coding | 1/8 | chr1 | TogoVar | |||||||
SYT3_chr19_50616977_50644881 | 50619900 | T | TTTATTA | downstream_gene_variant | MODIFIER | HG02080.hp1 NA18944.hp1 NA18957.hp2 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0011 others(1): Show |
4 | 388 | 0.0103 | 6 | c.*25 others(17): Show |
SYT3 | ENSG00000213023.11 | transcript | ENST00000600079.6 | protein_coding | 2076 | chr19 | TogoVar | |||||||
SYT3_chr19_50616977_50644881 | 50619949 | T | TTTATTA | downstream_gene_variant | MODIFIER | HG00609.hp2 HG02040.hp1 HG02165.hp2 others(4): Show |
a0001 | a0001c0002a0001c0005 | a0001c0002t0001a0001c0002t0002a0001c0002t0008others(1): Show | a0001c0002t0001g0165 a0001c0002t0002g0002 a0001c0002t0002g0005 others(4): Show |
7 | 388 | 0.0180 | 6 | c.*25 others(17): Show |
SYT3 | ENSG00000213023.11 | transcript | ENST00000600079.6 | protein_coding | 2027 | chr19 | TogoVar | |||||||
SYT5_chr19_55166196_55185289 | 55168386 | C | CATATAT | downstream_gene_variant | MODIFIER | HG00741.hp2 HG02040.hp1 NA18944.hp2 others(6): Show |
a0001a0012 | a0001c0001a0012c0009 | a0001c0001t0001a0001c0001t0003a0001c0001t0021others(4): Show | a0001c0001t0001g0001 a0001c0001t0003g0003 a0001c0001t0021g0021 others(4): Show |
9 | 410 | 0.0220 | 6 | c.*50 others(17): Show |
SYT5 | ENSG00000129990.15 | transcript | ENST00000354308.8 | protein_coding | 2809 | chr19 | TogoVar | |||||||
SYT5_chr19_55166196_55185289 | 55168402 | T | TAGAGAG | downstream_gene_variant | MODIFIER | HG03139.hp1 HG03239.hp1 NA20300.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0003 | 3 | 410 | 0.0073 | 6 | c.*50 others(17): Show |
SYT5 | ENSG00000129990.15 | transcript | ENST00000354308.8 | protein_coding | 2793 | chr19 | TogoVar |