view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FUT7_chr9_137025174_137037088 | 137034341 | G | GTTTGGAG others(683): Show |
upstream_gene_variant | MODIFIER | HG00140.hp2 HG00733.hp1 HG01099.hp2 others(11): Show |
a0001a0003 | a0001c0001a0001c0006a0001c0007others(1): Show | a0001c0001t0001a0001c0006t0001a0001c0007t0001others(1): Show | a0001c0001t0001g0001 a0001c0006t0001g0010 a0001c0007t0001g0011 others(1): Show |
14 | 356 | 0.0393 | 690 | c.-23 others(701): Show |
FUT7 | ENSG00000180549.8 | transcript | ENST00000314412.7 | protein_coding | 2254 | chr9 | TogoVar | |||||||
GPR173_chrX_53043789_53085615 | 53073912 | A | AAATATAT others(683): Show |
intron_variant | MODIFIER | HG00741.hp2 | a0002 | a0002c0004 | a0002c0004t0026 | a0002c0004t0026g0137 | 1 | 203 | 0.0049 | 690 | c.-97 others(707): Show |
GPR173 | ENSG00000184194.6 | transcript | ENST00000332582.5 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
GRAMD4_chr22_46615386_46684785 | 46635733 | C | CTATCCTC others(683): Show |
intron_variant | MODIFIER | HG03491.hp2 HG03492.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0012 | a0001c0001t0001g0005 a0001c0001t0012g0005 |
2 | 256 | 0.0078 | 690 | c.163 others(707): Show |
GRAMD4 | ENSG00000075240.17 | transcript | ENST00000406902.6 | protein_coding | 2/18 | chr22 | TogoVar | |||||||
GRAMD4_chr22_46615386_46684785 | 46635747 | C | CCCCGACC others(683): Show |
intron_variant | MODIFIER | NA19043.hp1 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0048 | 1 | 207 | 0.0048 | 690 | c.163 others(707): Show |
GRAMD4 | ENSG00000075240.17 | transcript | ENST00000406902.6 | protein_coding | 2/18 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
GRAMD4_chr22_46615386_46684785 | 46635747 | C | CCCCGCCC others(683): Show |
intron_variant | MODIFIER | HG02886.hp1 | a0002 | a0002c0010 | a0002c0010t0047 | a0002c0010t0047g0061 | 1 | 207 | 0.0048 | 690 | c.163 others(707): Show |
GRAMD4 | ENSG00000075240.17 | transcript | ENST00000406902.6 | protein_coding | 2/18 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
GREB1_chr2_11529045_11647788 | 11637073 | G | GGGGCAGG others(683): Show |
intron_variant | MODIFIER | HG04199.hp1 | a0002 | a0002c0005 | a0002c0005t0011 | a0002c0005t0011g0242 | 1 | 226 | 0.0044 | 690 | c.534 others(707): Show |
GREB1 | ENSG00000196208.14 | transcript | ENST00000381486.7 | protein_coding | 30/32 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GTPBP6_chrX_299759_323796 | 323558 | G | GTGTGTGT others(683): Show |
upstream_gene_variant | MODIFIER | HG01993.hp2 | a0003 | a0003c0034 | a0003c0034t0002 | a0003c0034t0002g0088 | 1 | 150 | 0.0067 | 690 | c.-47 others(701): Show |
GTPBP6 | ENSG00000178605.14 | transcript | ENST00000326153.10 | protein_coding | 4763 | chrX | TogoVar | |||||||
HELZ2_chr20_63553086_63579239 | 63566559 | G | GCAGTGAG others(683): Show |
intron_variant | MODIFIER | NA18942.hp1 NA18982.hp2 NA19068.hp2 |
a0002 | a0002c0002a0002c0005 | a0002c0002t0018a0002c0002t0111a0002c0005t0018 | a0002c0002t0018g0313 a0002c0002t0111g0323 a0002c0005t0018g0307 |
3 | 93 | 0.0323 | 690 | c.251 others(707): Show |
HELZ2 | ENSG00000130589.16 | transcript | ENST00000467148.2 | protein_coding | 7/19 | chr20 | TogoVar | |||||||
HELZ2_chr20_63553086_63579239 | 63566592 | G | GGGCACCC others(683): Show |
intron_variant | MODIFIER | NA18906.hp1 | a0076 | a0076c0087 | a0076c0087t0014 | a0076c0087t0014g0236 | 1 | 324 | 0.0031 | 690 | c.251 others(707): Show |
HELZ2 | ENSG00000130589.16 | transcript | ENST00000467148.2 | protein_coding | 7/19 | chr20 | TogoVar | |||||||
HLA-DRB1_chr6_32573775_32594848 | 32587398 | A | AAAATAAA others(683): Show |
intron_variant | MODIFIER | HG00323.hp1 HG01243.hp2 HG01346.hp2 others(20): Show |
a0003a0006a0016 | a0003c0003a0006c0005a0016c0018 | a0003c0003t0002a0006c0005t0002a0016c0018t0008 | a0003c0003t0002g0008 a0003c0003t0002g0015 a0003c0003t0002g0023 others(8): Show |
23 | 204 | 0.1127 | 690 | c.100 others(707): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 1/5 | chr6 | TogoVar | |||||||
ISOC2_chr19_55447985_55466642 | 55449121 | G | GACCACAC others(683): Show |
downstream_gene_variant | MODIFIER | HG01891.hp2 HG03516.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0103 a0001c0002t0001g0105 |
2 | 5 | 0.4000 | 690 | c.*41 others(701): Show |
ISOC2 | ENSG00000063241.8 | transcript | ENST00000425675.7 | protein_coding | 3863 | chr19 | TogoVar | |||||||
KHSRP_chr19_6408102_6429811 | 6429376 | G | GGAAGGGA others(683): Show |
upstream_gene_variant | MODIFIER | HG02004.hp2 HG02257.hp2 HG02280.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0056a0001c0001t0057 | a0001c0001t0014g0033 a0001c0001t0014g0038 a0001c0001t0056g0129 others(1): Show |
6 | 10 | 0.6000 | 690 | c.-46 others(701): Show |
KHSRP | ENSG00000088247.19 | transcript | ENST00000600480.2 | protein_coding | 4566 | chr19 | TogoVar | |||||||
KRT82_chr12_52388931_52411335 | 52409039 | T | TCCTCTCC others(683): Show |
upstream_gene_variant | MODIFIER | HG01361.hp1 HG01952.hp1 HG01993.hp2 others(1): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0003 a0002c0002t0001g0104 |
4 | 80 | 0.0500 | 690 | c.-27 others(701): Show |
KRT82 | ENSG00000161850.3 | transcript | ENST00000257974.3 | protein_coding | 2705 | chr12 | TogoVar | |||||||
KRT82_chr12_52388931_52411335 | 52409060 | C | CCCTCCTC others(683): Show |
upstream_gene_variant | MODIFIER | NA19082.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0001 | 1 | 367 | 0.0027 | 690 | c.-27 others(701): Show |
KRT82 | ENSG00000161850.3 | transcript | ENST00000257974.3 | protein_coding | 2726 | chr12 | TogoVar | |||||||
LAMA2_chr6_128878138_129521566 | 129385145 | G | GGAAAAAG others(683): Show |
intron_variant | MODIFIER | HG03486.hp2 | a0004 | a0004c0002 | a0004c0002t0001 | a0004c0002t0001g0062 | 1 | 8 | 0.1250 | 690 | c.507 others(709): Show |
LAMA2 | ENSG00000196569.14 | transcript | ENST00000421865.3 | protein_coding | 35/64 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
LGR6_chr1_202188799_202324761 | 202204775 | C | CACACACA others(683): Show |
intron_variant | MODIFIER | HG02630.hp1 HG03579.hp2 |
a0002a0004 | a0002c0002a0004c0003 | a0002c0002t0003a0004c0003t0003 | a0002c0002t0003g0015 a0004c0003t0003g0016 |
2 | 5 | 0.4000 | 690 | c.212 others(709): Show |
LGR6 | ENSG00000133067.18 | transcript | ENST00000367278.8 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
MAD1L1_chr7_1810795_2237945 | 2210527 | C | CGCATTCC others(683): Show |
intron_variant | MODIFIER | HG02280.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0257 | 1 | 244 | 0.0041 | 690 | c.986 others(707): Show |
MAD1L1 | ENSG00000002822.16 | transcript | ENST00000265854.12 | protein_coding | 10/18 | chr7 | TogoVar | |||||||
MMD2_chr7_4900998_4964187 | 4960099 | G | AGGGAGTG others(683): Show |
upstream_gene_variant | MODIFIER | HG01258.hp1 HG02897.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0001 | a0001c0001t0003g0131 a0001c0002t0001g0152 |
2 | 377 | 0.0053 | 690 | c.-10 others(701): Show |
MMD2 | ENSG00000136297.15 | transcript | ENST00000401401.8 | protein_coding | 912 | chr7 | TogoVar | |||||||
MOCS1_chr6_39899170_39939462 | 39926747 | A | AAGGGGGG others(683): Show |
intron_variant | MODIFIER | HG03017.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0211 | 1 | 8 | 0.1250 | 690 | c.250 others(705): Show |
MOCS1 | ENSG00000124615.20 | transcript | ENST00000340692.10 | protein_coding | 2/10 | chr6 | TogoVar | |||||||
MUSK_chr9_110663791_110811558 | 110690451 | A | AATATATA others(683): Show |
intron_variant | MODIFIER | NA19043.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0049 | 1 | 156 | 0.0064 | 690 | c.358 others(707): Show |
MUSK | ENSG00000030304.15 | transcript | ENST00000374448.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
MUSK_chr9_110663791_110811558 | 110690451 | A | AATATATA others(683): Show |
intron_variant | MODIFIER | HG02622.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0051 | 1 | 156 | 0.0064 | 690 | c.358 others(707): Show |
MUSK | ENSG00000030304.15 | transcript | ENST00000374448.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
MUSK_chr9_110663791_110811558 | 110690451 | A | AATATATA others(683): Show |
intron_variant | MODIFIER | NA18986.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0037 | 1 | 156 | 0.0064 | 690 | c.358 others(707): Show |
MUSK | ENSG00000030304.15 | transcript | ENST00000374448.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
MUSK_chr9_110663791_110811558 | 110690451 | A | AATATATA others(683): Show |
intron_variant | MODIFIER | HG02895.hp2 | a0002 | a0002c0004 | a0002c0004t0005 | a0002c0004t0005g0122 | 1 | 156 | 0.0064 | 690 | c.358 others(707): Show |
MUSK | ENSG00000030304.15 | transcript | ENST00000374448.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
MUSK_chr9_110663791_110811558 | 110690451 | A | AATATATA others(683): Show |
intron_variant | MODIFIER | HG04184.hp1 | a0001 | a0001c0001 | a0001c0001t0022 | a0001c0001t0022g0061 | 1 | 156 | 0.0064 | 690 | c.358 others(707): Show |
MUSK | ENSG00000030304.15 | transcript | ENST00000374448.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
MUSK_chr9_110663791_110811558 | 110690451 | A | AATATATA others(683): Show |
intron_variant | MODIFIER | HG01993.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0040 | 1 | 156 | 0.0064 | 690 | c.358 others(707): Show |
MUSK | ENSG00000030304.15 | transcript | ENST00000374448.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
MYRIP_chr3_39804609_40265321 | 40203779 | T | TTATATAG others(683): Show |
intron_variant | MODIFIER | HG03704.hp2 NA19043.hp1 NA19081.hp1 |
a0003 | a0003c0007 | a0003c0007t0001 | a0003c0007t0001g0049 a0003c0007t0001g0064 a0003c0007t0001g0130 |
3 | 66 | 0.0455 | 690 | c.166 others(709): Show |
MYRIP | ENSG00000170011.14 | transcript | ENST00000302541.11 | protein_coding | 10/16 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
NCAPG2_chr7_158626169_158709804 | 158667329 | G | GCCCTCCT others(683): Show |
intron_variant | MODIFIER | NA19090.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0263 | 1 | 122 | 0.0082 | 690 | c.148 others(709): Show |
NCAPG2 | ENSG00000146918.20 | transcript | ENST00000356309.8 | protein_coding | 13/27 | chr7 | TogoVar | |||||||
ODF3_chr11_191761_205258 | 196404 | G | GGGACATG others(683): Show |
upstream_gene_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 | 1 | 347 | 0.0029 | 690 | c.-65 others(699): Show |
ODF3 | ENSG00000177947.15 | transcript | ENST00000325113.9 | protein_coding | 356 | chr11 | TogoVar | |||||||
PCDH15_chr10_53797771_54806231 | 54332312 | A | AATATAAT others(683): Show |
intron_variant | MODIFIER | HG02922.hp2 | a0026 | a0026c0015 | a0026c0015t0001 | a0026c0015t0001g0025 | 1 | 81 | 0.0123 | 690 | c.595 others(707): Show |
PCDH15 | ENSG00000150275.20 | transcript | ENST00000644397.2 | protein_coding | 6/37 | chr10 | TogoVar | |||||||
PCDH15_chr10_53816099_54806231 | 54332312 | A | AATATAAT others(683): Show |
intron_variant | MODIFIER | HG02922.hp2 | a0018 | a0018c0017 | a0018c0017t0001 | a0018c0017t0001g0024 | 1 | 76 | 0.0132 | 690 | c.595 others(707): Show |
PCDH15 | ENSG00000150275.20 | transcript | ENST00000320301.11 | protein_coding | 6/32 | chr10 | TogoVar | |||||||
PDE1C_chr7_31746179_32075407 | 31886851 | T | TTTCAGAA others(683): Show |
intron_variant | MODIFIER | HG03486.hp2 | a0001 | a0001c0018 | a0001c0018t0002 | a0001c0018t0002g0009 | 1 | 50 | 0.0200 | 690 | c.129 others(707): Show |
PDE1C | ENSG00000154678.18 | transcript | ENST00000396191.6 | protein_coding | 2/17 | chr7 | TogoVar | |||||||
PERM1_chr1_970198_987093 | 976708 | A | ACCCCCAC others(683): Show |
intron_variant | MODIFIER | HG00621.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0110 | 1 | 399 | 0.0025 | 690 | c.215 others(705): Show |
PERM1 | ENSG00000187642.10 | transcript | ENST00000433179.4 | protein_coding | 2/3 | chr1 | TogoVar | |||||||
PLA2G4C_chr19_48042846_48115817 | 48043533 | C | CCACCACC others(683): Show |
downstream_gene_variant | MODIFIER | HG00738.hp1 | a0002 | a0002c0005 | a0002c0005t0002 | a0002c0005t0002g0230 | 1 | 140 | 0.0071 | 690 | c.*48 others(701): Show |
PLA2G4C | ENSG00000105499.14 | transcript | ENST00000599921.6 | protein_coding | 4312 | chr19 | TogoVar | |||||||
PLCL2_chr3_16879955_17095604 | 16980106 | A | ACCTCCCT others(683): Show |
intron_variant | MODIFIER | HG02055.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0136 | 1 | 220 | 0.0045 | 690 | c.328 others(709): Show |
PLCL2 | ENSG00000154822.18 | transcript | ENST00000615277.5 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PLCL2_chr3_16879955_17095604 | 16980106 | A | ACCTCCCT others(683): Show |
intron_variant | MODIFIER | HG01109.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0129 | 1 | 220 | 0.0045 | 690 | c.328 others(709): Show |
PLCL2 | ENSG00000154822.18 | transcript | ENST00000615277.5 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
PRDM16_chr1_3064203_3443621 | 3181307 | C | CGGCCTTA others(683): Show |
intron_variant | MODIFIER | HG00140.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0135 | 1 | 170 | 0.0059 | 690 | c.38- others(705): Show |
PRDM16 | ENSG00000142611.17 | transcript | ENST00000270722.10 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RFC1_chr4_39282456_39371362 | 39348424 | A | AAAAAGAA others(683): Show |
intron_variant | MODIFIER | NA19004.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0208 | 1 | 81 | 0.0123 | 690 | c.132 others(707): Show |
RFC1 | ENSG00000035928.17 | transcript | ENST00000349703.7 | protein_coding | 2/24 | chr4 | TogoVar | |||||||
RFX2_chr19_5988164_6115500 | 6070038 | G | GGAATGGG others(683): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00741.hp2 others(24): Show |
a0001 | a0001c0001a0001c0003a0001c0007 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(5): Show | a0001c0001t0001g0009 a0001c0001t0001g0233 a0001c0001t0001g0235 others(24): Show |
27 | 288 | 0.0938 | 690 | c.-8- others(707): Show |
RFX2 | ENSG00000087903.13 | transcript | ENST00000303657.10 | protein_coding | 1/17 | chr19 | TogoVar | |||||||
RNF223_chr1_1065967_1079306 | 1078380 | G | GGGGGAGG others(683): Show |
upstream_gene_variant | MODIFIER | NA20805.hp1 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0008 | 1 | 223 | 0.0045 | 690 | c.-43 others(701): Show |
RNF223 | ENSG00000237330.3 | transcript | ENST00000453464.3 | protein_coding | 4075 | chr1 | TogoVar | |||||||
RPH3AL_chr17_207389_357807 | 242609 | C | CCTTCCTC others(683): Show |
intron_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0043 | 1 | 126 | 0.0079 | 690 | c.613 others(707): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | |||||||
SCGB1C1_chr11_188078_199575 | 196404 | G | GGGACATG others(683): Show |
downstream_gene_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0001 | 1 | 316 | 0.0032 | 690 | c.*19 others(701): Show |
SCGB1C1 | ENSG00000188076.3 | transcript | ENST00000342878.3 | protein_coding | 1830 | chr11 | TogoVar | |||||||
SENP7_chr3_101319205_101518212 | 101439968 | C | CGGCCAGC others(683): Show |
intron_variant | MODIFIER | HG01175.hp2 | a0003 | a0003c0004 | a0003c0004t0002 | a0003c0004t0002g0102 | 1 | 203 | 0.0049 | 690 | c.284 others(709): Show |
SENP7 | ENSG00000138468.16 | transcript | ENST00000394095.7 | protein_coding | 4/23 | chr3 | TogoVar | |||||||
SEPTIN9_chr17_77276499_77505593 | 77356670 | C | CCCCCTCC others(683): Show |
intron_variant | MODIFIER | NA18612.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0044 | 1 | 40 | 0.0250 | 690 | c.77- others(707): Show |
SEPTIN9 | ENSG00000184640.20 | transcript | ENST00000427177.6 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SLC25A41_chr19_6421037_6438763 | 6429376 | G | GGAAGGGA others(683): Show |
intron_variant | MODIFIER | HG02004.hp2 HG02257.hp1 HG02280.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008 a0001c0001t0001g0054 a0001c0001t0001g0055 |
6 | 7 | 0.8571 | 690 | c.624 others(705): Show |
SLC25A41 | ENSG00000181240.14 | transcript | ENST00000321510.7 | protein_coding | 4/6 | chr19 | TogoVar | |||||||
SLIT3_chr5_168656740_169306139 | 168726523 | G | GGAGGGAG others(683): Show |
intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0010 | a0001c0010t0035 | a0001c0010t0035g0103 | 1 | 107 | 0.0093 | 690 | c.227 others(709): Show |
SLIT3 | ENSG00000184347.16 | transcript | ENST00000519560.6 | protein_coding | 20/35 | chr5 | TogoVar | |||||||
SMIM47_chr19_50780728_50791160 | 50784590 | G | GGGAGGGA others(683): Show |
downstream_gene_variant | MODIFIER | HG02145.hp2 HG02559.hp2 HG03453.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 4 | 138 | 0.0290 | 690 | c.*12 others(701): Show |
SMIM47 | ENSG00000261341.7 | transcript | ENST00000562076.2 | protein_coding | 1137 | chr19 | TogoVar | |||||||
SNTG2_chr2_945849_1372613 | 1222769 | T | TGGTGCAG others(683): Show |
intron_variant | MODIFIER | HG01169.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0023 | 1 | 158 | 0.0063 | 690 | c.719 others(709): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 9/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPATA6_chr1_48290373_48477204 | 48384325 | G | GGAGGGAG others(683): Show |
intron_variant | MODIFIER | HG01123.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0195 | 1 | 283 | 0.0035 | 690 | c.909 others(705): Show |
SPATA6 | ENSG00000132122.12 | transcript | ENST00000371847.8 | protein_coding | 9/12 | chr1 | TogoVar | |||||||
TGM2_chr20_38122385_38170270 | 38124011 | T | TATAATAT others(683): Show |
downstream_gene_variant | MODIFIER | HG01167.hp1 HG03195.hp2 HG03540.hp1 others(1): Show |
a0001 | a0001c0006a0001c0009 | a0001c0006t0007a0001c0009t0007 | a0001c0006t0007g0033 a0001c0006t0007g0279 a0001c0009t0007g0146 |
4 | 320 | 0.0125 | 690 | c.*62 others(701): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3373 | chr20 | TogoVar | |||||||
TMEM120B_chr12_121707752_121787068 | 121747289 | G | GCTGGGGT others(683): Show |
intron_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0001 | a0001c0001t0063 | a0001c0001t0063g0155 | 1 | 264 | 0.0038 | 690 | c.189 others(707): Show |
TMEM120B | ENSG00000188735.13 | transcript | ENST00000449592.7 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar |