view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SORCS2_chr4_7187538_7747827 | 7449168 | C | CCCTCCCT | intron_variant | MODIFIER | HG00099.hp2 HG00639.hp2 HG01106.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0034others(1): Show | a0001c0001t0005a0001c0002t0008a0001c0002t0039others(2): Show | a0001c0001t0005g0085 a0001c0002t0008g0121 a0001c0002t0039g0070 others(2): Show |
5 | 163 | 0.0307 | 7 | c.548 others(26): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | chr4 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7496453 | T | TCCCCGTC | intron_variant | MODIFIER | HG01891.hp1 HG02109.hp1 HG02559.hp2 others(4): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0058a0001c0002t0003a0001c0005t0008others(4): Show | a0001c0001t0058g0161 a0001c0002t0003g0018 a0001c0005t0008g0065 others(4): Show |
7 | 147 | 0.0476 | 7 | c.549 others(26): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7496465 | G | GTCCCCCA | intron_variant | MODIFIER | HG00323.hp1 HG00639.hp2 HG01106.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0003a0001c0001t0007a0001c0001t0013others(7): Show | a0001c0001t0003g0097 a0001c0001t0007g0055 a0001c0001t0013g0099 others(7): Show |
10 | 87 | 0.1149 | 7 | c.549 others(26): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7724384 | G | GTACTGGT | intron_variant | MODIFIER | HG01109.hp2 HG02258.hp1 |
a0003a0008 | a0003c0013a0008c0056 | a0003c0013t0018a0008c0056t0018 | a0003c0013t0018g0100 a0008c0056t0018g0061 |
2 | 168 | 0.0119 | 7 | c.261 others(24): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 19/26 | chr4 | TogoVar | |||||||
SORCS3_chr10_104636290_105270242 | 104671019 | T | TTGCTGAA | intron_variant | MODIFIER | HG03098.hp1 HG06807.hp2 NA19043.hp2 |
a0001 | a0001c0001a0001c0015 | a0001c0001t0001a0001c0001t0002a0001c0015t0002 | a0001c0001t0001g0124 a0001c0001t0002g0123 a0001c0015t0002g0130 |
3 | 134 | 0.0224 | 7 | c.627 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104696390 | A | AATATACT | intron_variant | MODIFIER | HG00609.hp1 HG00741.hp2 HG01071.hp1 others(16): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0002a0001c0006others(4): Show | a0001c0001t0002a0001c0001t0004a0001c0002t0001others(8): Show | a0001c0001t0002g0062 a0001c0001t0002g0065 a0001c0001t0002g0082 others(16): Show |
19 | 124 | 0.1532 | 7 | c.627 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104696413 | T | TATATATA | intron_variant | MODIFIER | HG00642.hp2 HG00741.hp2 HG01081.hp1 others(23): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0040 a0001c0001t0001g0046 a0001c0001t0002g0082 others(23): Show |
26 | 52 | 0.5000 | 7 | c.627 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104696426 | T | TAATATAG | intron_variant | MODIFIER | HG02647.hp2 HG02965.hp2 HG03225.hp2 |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0003t0003 | a0001c0002t0001g0051 a0001c0003t0003g0054 a0001c0003t0003g0055 |
3 | 134 | 0.0224 | 7 | c.627 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104696466 | T | TATATATA | intron_variant | MODIFIER | HG01099.hp1 HG02895.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0023 a0001c0001t0004g0045 |
2 | 131 | 0.0153 | 7 | c.627 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104696472 | G | GAATATAT | intron_variant | MODIFIER | HG00140.hp1 HG00609.hp2 HG01070.hp1 others(32): Show |
a0001a0003a0009others(1): Show | a0001c0001a0001c0002a0001c0018others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0037 others(32): Show |
35 | 110 | 0.3182 | 7 | c.627 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104735456 | G | GTTTTTTT | intron_variant | MODIFIER | HG01081.hp1 HG02970.hp1 HG02976.hp2 others(2): Show |
a0001a0012 | a0001c0001a0001c0002a0012c0012 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(2): Show | a0001c0001t0001g0009 a0001c0001t0003g0079 a0001c0001t0009g0080 others(2): Show |
5 | 17 | 0.2941 | 7 | c.627 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104887971 | G | GGGGGTGC | intron_variant | MODIFIER | HG00642.hp2 HG01071.hp2 HG01081.hp1 others(9): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(4): Show | a0001c0001t0001g0041 a0001c0001t0001g0046 a0001c0001t0002g0016 others(9): Show |
12 | 79 | 0.1519 | 7 | c.696 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 105087487 | G | GAAAAAAA | intron_variant | MODIFIER | HG01099.hp1 HG01106.hp1 HG01167.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0023 a0001c0001t0003g0033 a0001c0001t0003g0079 others(5): Show |
8 | 83 | 0.0964 | 7 | c.102 others(26): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 5/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 105129332 | T | TCTCTCTC | intron_variant | MODIFIER | HG00140.hp2 HG01123.hp1 HG01175.hp1 others(4): Show |
a0001a0011 | a0001c0001a0011c0017 | a0001c0001t0001a0011c0017t0003 | a0001c0001t0001g0026 a0001c0001t0001g0040 a0001c0001t0001g0049 others(4): Show |
7 | 127 | 0.0551 | 7 | c.121 others(28): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 7/26 | chr10 | TogoVar | |||||||
SORL1_chr11_121447314_121638763 | 121502124 | C | CTTTTTTT | intron_variant | MODIFIER | HG00544.hp1 HG00738.hp2 HG01891.hp2 others(11): Show |
a0001a0002a0012 | a0001c0009a0002c0005a0002c0007others(3): Show | a0001c0009t0008a0002c0005t0001a0002c0005t0004others(8): Show | a0001c0009t0008g0207 a0002c0005t0001g0042 a0002c0005t0001g0202 others(11): Show |
14 | 86 | 0.1628 | 7 | c.939 others(24): Show |
SORL1 | ENSG00000137642.13 | transcript | ENST00000260197.12 | protein_coding | 6/47 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SORT1_chr1_109304575_109402918 | 109375541 | C | CAAAAAAA | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00323.hp2 others(124): Show |
a0001a0003a0007others(2): Show | a0001c0001a0003c0011a0007c0012others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(18): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0017 others(122): Show |
127 | 144 | 0.8819 | 7 | c.307 others(24): Show |
SORT1 | ENSG00000134243.12 | transcript | ENST00000256637.8 | protein_coding | 1/19 | chr1 | TogoVar | |||||||
SORT1_chr1_109304575_109402918 | 109380813 | C | CAAAAAAA | intron_variant | MODIFIER | HG02055.hp2 HG02145.hp1 HG02723.hp2 others(2): Show |
a0001a0005 | a0001c0003a0005c0010 | a0001c0003t0005a0001c0003t0012a0005c0010t0005 | a0001c0003t0005g0020 a0001c0003t0005g0025 a0001c0003t0005g0026 others(2): Show |
5 | 56 | 0.0893 | 7 | c.307 others(26): Show |
SORT1 | ENSG00000134243.12 | transcript | ENST00000256637.8 | protein_coding | 1/19 | chr1 | TogoVar | |||||||
SOS1_chr2_38976549_39126051 | 39102204 | C | CAAAAAAA | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00597.hp2 others(49): Show |
a0001a0004 | a0001c0001a0001c0004a0004c0006 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(9): Show | a0001c0001t0001g0008 a0001c0001t0001g0065 a0001c0001t0001g0066 others(49): Show |
52 | 86 | 0.6047 | 7 | c.87+ others(24): Show |
SOS1 | ENSG00000115904.15 | transcript | ENST00000402219.8 | protein_coding | 1/22 | chr2 | TogoVar | |||||||
SOS2_chr14_50112130_50236578 | 50125608 | C | CCAAATGT | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(332): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(20): Show | a0001c0001t0001g0001 a0001c0001t0001g0109 a0001c0001t0001g0121 others(331): Show |
335 | 380 | 0.8816 | 7 | c.337 others(26): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 21/22 | chr14 | TogoVar | |||||||
SOS2_chr14_50112130_50236578 | 50189331 | C | CAAAAAAA | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp2 HG00544.hp1 others(80): Show |
a0001 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0140 a0001c0001t0001g0141 others(79): Show |
83 | 129 | 0.6434 | 7 | c.511 others(22): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 4/22 | chr14 | TogoVar | |||||||
SOS2_chr14_50112130_50236578 | 50224883 | C | CAAAAAAA | intron_variant | MODIFIER | HG00642.hp1 HG00733.hp2 HG01069.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0004others(3): Show | a0001c0001t0001g0122 a0001c0001t0001g0147 a0001c0001t0001g0225 others(9): Show |
12 | 57 | 0.2105 | 7 | c.87+ others(22): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 1/22 | chr14 | TogoVar | |||||||
SOX13_chr1_204068115_204132743 | 204081532 | G | GTGGGGGT | intron_variant | MODIFIER | HG00597.hp1 HG00609.hp1 HG02015.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 others(2): Show |
5 | 362 | 0.0138 | 7 | c.-2+ others(22): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204096239 | G | GTTTTTTT | intron_variant | MODIFIER | HG00423.hp2 HG00544.hp2 HG00735.hp1 others(46): Show |
a0001a0006 | a0001c0001a0006c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 others(45): Show |
49 | 150 | 0.3267 | 7 | c.-1- others(24): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204101504 | T | TAAAAAAA | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp2 others(181): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0010a0003c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 others(171): Show |
184 | 220 | 0.8364 | 7 | c.-1- others(24): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX17_chr8_54452935_54465892 | 54462354 | A | AACTATGT | downstream_gene_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG01109.hp2 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0002 | a0001c0001t0001g0006 a0001c0001t0002g0005 a0001c0003t0002g0005 |
7 | 416 | 0.0168 | 7 | c.*23 others(18): Show |
SOX17 | ENSG00000164736.6 | transcript | ENST00000297316.5 | protein_coding | 1463 | chr8 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157632047 | T | TAAAAAAA | intron_variant | MODIFIER | HG02717.hp1 HG02818.hp2 HG02965.hp1 others(4): Show |
a0003 | a0003c0005 | a0003c0005t0003 | a0003c0005t0003g0004 a0003c0005t0003g0272 |
7 | 127 | 0.0551 | 7 | c.188 others(26): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 4/4 | chr5 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23530495 | C | CAAACAAT | 3_prime_UTR_variant | MODIFIER | HG00597.hp1 HG00597.hp2 HG00639.hp1 others(60): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(40): Show | a0001c0001t0003g0086 a0001c0001t0003g0093 a0001c0001t0003g0120 others(60): Show |
63 | 106 | 0.5943 | 7 | c.*37 others(18): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 15/15 | 3723 | chr12 | TogoVar | ||||||
SOX5_chr12_23524504_23954670 | 23577191 | A | ATATATTT | intron_variant | MODIFIER | HG00597.hp2 HG01981.hp1 HG02083.hp1 others(19): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0001t0014a0001c0001t0019others(17): Show | a0001c0001t0006g0068 a0001c0001t0014g0097 a0001c0001t0019g0066 others(19): Show |
22 | 149 | 0.1477 | 7 | c.116 others(26): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 9/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23577192 | T | TATATATA | intron_variant | MODIFIER | HG02647.hp1 HG02895.hp1 HG02965.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0028others(1): Show | a0001c0001t0003g0093 a0001c0001t0004g0209 a0001c0001t0028g0185 others(1): Show |
4 | 164 | 0.0244 | 7 | c.116 others(26): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 9/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23578117 | C | CAAAAAAA | intron_variant | MODIFIER | HG01167.hp1 HG01993.hp1 HG02040.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0009a0001c0001t0028others(5): Show | a0001c0001t0008g0205 a0001c0001t0009g0017 a0001c0001t0009g0041 others(7): Show |
10 | 21 | 0.4762 | 7 | c.116 others(26): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 9/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23674336 | A | ATTTTTTT | intron_variant | MODIFIER | HG01168.hp1 HG01169.hp1 HG01175.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0016a0001c0001t0054others(3): Show | a0001c0001t0007g0164 a0001c0001t0007g0165 a0001c0001t0016g0088 others(4): Show |
7 | 11 | 0.6364 | 7 | c.811 others(24): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 6/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23792622 | C | CAAAAAAA | intron_variant | MODIFIER | HG00597.hp2 HG01891.hp2 HG01993.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0009a0001c0001t0014a0001c0001t0020others(4): Show | a0001c0001t0009g0017 a0001c0001t0009g0187 a0001c0001t0014g0097 others(5): Show |
8 | 21 | 0.3810 | 7 | c.482 others(26): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23837257 | T | TTATATAA | intron_variant | MODIFIER | HG02602.hp2 HG03139.hp2 HG03579.hp1 |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0082a0001c0001t0112 | a0001c0001t0014g0128 a0001c0001t0082g0002 a0001c0001t0112g0001 |
3 | 196 | 0.0153 | 7 | c.481 others(24): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16103993 | A | ATAAAAAT | intron_variant | MODIFIER | HG00544.hp1 HG01069.hp1 HG01106.hp2 others(60): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0168 a0001c0001t0001g0172 a0001c0001t0002g0050 others(60): Show |
63 | 216 | 0.2917 | 7 | c.899 others(24): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 7/15 | chr11 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16131635 | A | ATAGTACT | intron_variant | MODIFIER | HG00544.hp1 HG01069.hp1 HG01106.hp2 others(61): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0168 a0001c0001t0001g0172 a0001c0001t0002g0050 others(61): Show |
64 | 216 | 0.2963 | 7 | c.778 others(26): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16132323 | G | GAAAGAAA | intron_variant | MODIFIER | HG02258.hp1 NA18982.hp2 NA19091.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0014a0001c0002t0003a0001c0002t0006 | a0001c0001t0014g0029 a0001c0002t0003g0140 a0001c0002t0006g0136 |
3 | 193 | 0.0155 | 7 | c.778 others(26): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16349759 | G | GGAAGGAA | intron_variant | MODIFIER | HG00544.hp2 HG01106.hp1 HG02040.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0002t0001others(2): Show | a0001c0001t0002g0161 a0001c0001t0002g0164 a0001c0001t0002g0187 others(7): Show |
10 | 207 | 0.0483 | 7 | c.-5+ others(22): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 1/15 | chr11 | TogoVar | |||||||
SOX7_chr8_10718768_10735511 | 10720468 | A | AAAGAAAG | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(157): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0006others(7): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(22): Show | a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0020 others(44): Show |
160 | 459 | 0.3486 | 7 | c.*52 others(18): Show |
SOX7 | ENSG00000171056.8 | transcript | ENST00000304501.2 | protein_coding | 3299 | chr8 | TogoVar | |||||||
SOX7_chr8_10718768_10735511 | 10733935 | C | CAAAAAAA | upstream_gene_variant | MODIFIER | HG00544.hp1 HG00609.hp2 HG01978.hp2 others(20): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(5): Show | a0001c0001t0015a0001c0002t0004a0001c0002t0005others(6): Show | a0001c0001t0015g0048 a0001c0001t0015g0132 a0001c0002t0004g0047 others(8): Show |
23 | 425 | 0.0541 | 7 | c.-35 others(18): Show |
SOX7 | ENSG00000171056.8 | transcript | ENST00000304501.2 | protein_coding | 3425 | chr8 | TogoVar | |||||||
SP100_chr2_230411201_230550606 | 230466184 | C | CAAAAAAA | intron_variant | MODIFIER | HG01123.hp2 HG01346.hp1 HG01433.hp1 others(12): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0002a0001c0001t0008a0001c0001t0010others(3): Show | a0001c0001t0002g0105 a0001c0001t0002g0195 a0001c0001t0002g0200 others(12): Show |
15 | 113 | 0.1327 | 7 | c.114 others(23): Show |
SP100 | ENSG00000067066.17 | transcript | ENST00000340126.9 | protein_coding | 11/28 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SP140L_chr2_230322193_230408732 | 230326454 | C | CTTAGGTG | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(154): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0004a0001c0018others(21): Show | a0001c0001t0001a0001c0004t0002a0001c0004t0004others(23): Show | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 others(144): Show |
157 | 334 | 0.4701 | 7 | c.-81 others(16): Show |
SP140L | ENSG00000185404.17 | transcript | ENST00000415673.7 | protein_coding | 738 | chr2 | TogoVar | |||||||
SP140L_chr2_230322193_230408732 | 230395061 | C | CAGGTTCA | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00639.hp1 others(57): Show |
a0001a0005a0008 | a0001c0004a0001c0017a0005c0007others(2): Show | a0001c0004t0001a0001c0004t0002a0001c0004t0004others(6): Show | a0001c0004t0001g0285 a0001c0004t0002g0002 a0001c0004t0002g0019 others(52): Show |
60 | 334 | 0.1796 | 7 | c.115 others(26): Show |
SP140L | ENSG00000185404.17 | transcript | ENST00000415673.7 | protein_coding | 13/18 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SP140_chr2_230220736_230318215 | 230288518 | T | TTTCTTTC | intron_variant | MODIFIER | HG00639.hp1 HG01081.hp2 HG02015.hp2 others(23): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0008 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(1): Show | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0094 others(22): Show |
26 | 314 | 0.0828 | 7 | c.172 others(24): Show |
SP140 | ENSG00000079263.19 | transcript | ENST00000392045.8 | protein_coding | 18/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SP2_chr17_47891236_47933957 | 47919825 | C | CTTTTTTT | intron_variant | MODIFIER | HG01081.hp2 HG01123.hp2 HG01169.hp1 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0008 a0001c0001t0001g0033 a0001c0001t0001g0170 others(13): Show |
20 | 23 | 0.8696 | 7 | c.105 others(26): Show |
SP2 | ENSG00000167182.16 | transcript | ENST00000376741.5 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SP4_chr7_21423083_21519822 | 21498061 | G | GAAAATTA | intron_variant | MODIFIER | HG01081.hp2 HG02109.hp1 HG02965.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0014 a0001c0001t0016g0021 a0001c0001t0016g0298 others(2): Show |
6 | 424 | 0.0142 | 7 | c.210 others(28): Show |
SP4 | ENSG00000105866.15 | transcript | ENST00000222584.8 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SPACA5_chrX_48001988_48014733 | 48012915 | C | CAAAAAAA | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00438.hp1 HG00438.hp2 others(51): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(4): Show |
54 | 70 | 0.7714 | 7 | c.*32 others(18): Show |
SPACA5 | ENSG00000171489.11 | transcript | ENST00000376940.4 | protein_coding | 3183 | chrX | TogoVar | |||||||
SPAG11A_chr8_7843008_7865943 | 7863213 | A | ATTTTTTT | downstream_gene_variant | MODIFIER | HG01884.hp2 HG02145.hp1 HG03130.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0077 a0001c0001t0001g0084 a0001c0001t0001g0087 others(2): Show |
5 | 8 | 0.6250 | 7 | c.*23 others(18): Show |
SPAG11A | ENSG00000178287.18 | transcript | ENST00000642566.2 | protein_coding | 2271 | chr8 | TogoVar | |||||||
SPAG16_chr2_213279464_214415501 | 213292682 | A | ACAACAAC | intron_variant | MODIFIER | HG01891.hp2 HG02015.hp1 HG02922.hp1 others(4): Show |
a0001a0007a0009others(2): Show | a0001c0001a0007c0007a0009c0008others(2): Show | a0001c0001t0001a0007c0007t0001a0009c0008t0001others(2): Show | a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 others(4): Show |
7 | 86 | 0.0814 | 7 | c.137 others(24): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 1/15 | chr2 | TogoVar | |||||||
SPAG16_chr2_213279464_214415501 | 213387431 | C | CTTTTTTT | intron_variant | MODIFIER | HG00673.hp1 HG00735.hp2 HG01256.hp1 others(7): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(1): Show | a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0030 others(7): Show |
10 | 16 | 0.6250 | 7 | c.942 others(26): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 9/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213546580 | G | GGACAAGA | intron_variant | MODIFIER | HG02015.hp1 HG02559.hp1 HG02717.hp2 others(15): Show |
a0001a0002a0005others(3): Show | a0001c0001a0002c0002a0005c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(5): Show | a0001c0001t0001g0003 a0001c0001t0001g0012 a0001c0001t0001g0013 others(15): Show |
18 | 86 | 0.2093 | 7 | c.107 others(28): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |