Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FOXP1_chr3_70949708_71588728	71208536	T T	TTCTGTGT others(1): Show TTCTGTGTG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01109.hp1 HG02486.hp1 others(4): Show HG00639.hp1 HG01109.hp1 HG02486.hp1 HG02818.hp2 HG03209.hp1 HG03704.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0015 a0001c0001t0026 others(4): Show a0001c0001t0014 a0001c0001t0015 a0001c0001t0026 a0001c0001t0029 a0001c0001t0032 a0001c0001t0069 a0001c0001t0075	a0001c0001t0014g0066 a0001c0001t0015g0050 a0001c0001t0026g0083 others(4): Show a0001c0001t0014g0066 a0001c0001t0015g0050 a0001c0001t0026g0083 a0001c0001t0029g0071 a0001c0001t0032g0089 a0001c0001t0069g0027 a0001c0001t0075g0030	7	96	0.0729	8	c.-11 others(27): Show c.-11-10145_-11-10144insCACACAGA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71267124	A A	AGAGAGTG others(1): Show AGAGAGTGT	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02723.hp1 HG03041.hp1 others(2): Show HG02572.hp2 HG02723.hp1 HG03041.hp1 HG03453.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0037 others(2): Show a0001c0001t0001 a0001c0001t0013 a0001c0001t0037 a0001c0001t0041 a0001c0001t0044	a0001c0001t0001g0038 a0001c0001t0013g0012 a0001c0001t0037g0011 others(2): Show a0001c0001t0001g0038 a0001c0001t0013g0012 a0001c0001t0037g0011 a0001c0001t0041g0090 a0001c0001t0044g0078	5	96	0.0521	8	c.-12 others(27): Show c.-12+32695_-12+32696insACACTCTC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71267124	A A	AGAGTGTG others(1): Show AGAGTGTGT	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01496.hp2 HG02451.hp2 others(11): Show HG01071.hp2 HG01496.hp2 HG02451.hp2 HG02647.hp2 HG03098.hp2 HG03139.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03579.hp2 HG04199.hp2 HG04228.hp1 NA18906.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(11): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0016 a0001c0001t0021 a0001c0001t0022 a0001c0001t0034 a0001c0001t0038 a0001c0001t0050 a0001c0001t0052 a0001c0001t0079	a0001c0001t0002g0080 a0001c0001t0004g0056 a0001c0001t0006g0054 others(11): Show a0001c0001t0002g0080 a0001c0001t0004g0056 a0001c0001t0006g0054 a0001c0001t0009g0029 a0001c0001t0010g0091 a0001c0001t0011g0001 a0001c0001t0016g0041 a0001c0001t0021g0042 a0001c0001t0022g0047 a0001c0001t0034g0040 a0001c0001t0038g0013 a0001c0001t0050g0095 a0001c0001t0052g0084 a0001c0001t0079g0014	14	96	0.1458	8	c.-12 others(27): Show c.-12+32695_-12+32696insACACACTC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71279192	A A	AAAAAAAA others(1): Show AAAAAAAAC	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01516.hp2 HG02486.hp1 others(5): Show HG00735.hp1 HG01516.hp2 HG02486.hp1 HG02717.hp2 HG02922.hp2 HG03209.hp2 HG04228.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0010 a0001c0001t0012 others(5): Show a0001c0001t0003 a0001c0001t0010 a0001c0001t0012 a0001c0001t0017 a0001c0001t0019 a0001c0001t0025 a0001c0001t0026 a0001c0001t0073	a0001c0001t0003g0086 a0001c0001t0010g0073 a0001c0001t0012g0063 others(5): Show a0001c0001t0003g0086 a0001c0001t0010g0073 a0001c0001t0012g0063 a0001c0001t0017g0052 a0001c0001t0019g0088 a0001c0001t0025g0015 a0001c0001t0026g0083 a0001c0001t0073g0072	8	96	0.0833	8	c.-12 others(27): Show c.-12+20627_-12+20628insGTTTTTTT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71289019	C C	CTTATTTA others(1): Show CTTATTTAT	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01109.hp2 HG01169.hp2 others(11): Show HG00639.hp1 HG01109.hp2 HG01169.hp2 HG01516.hp1 HG01952.hp1 HG02257.hp2 HG02451.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG03139.hp2 HG03239.hp1 HG03704.hp2 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 others(11): Show a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0028 a0001c0001t0043 a0001c0001t0048 a0001c0001t0054 a0001c0001t0056 a0001c0001t0060 a0001c0001t0064 a0001c0001t0069 a0001c0001t0074 a0001c0001t0075 a0001c0001t0076	a0001c0001t0006g0054 a0001c0001t0008g0039 a0001c0001t0009g0029 others(11): Show a0001c0001t0006g0054 a0001c0001t0008g0039 a0001c0001t0009g0029 a0001c0001t0028g0049 a0001c0001t0043g0053 a0001c0001t0048g0031 a0001c0001t0054g0058 a0001c0001t0056g0093 a0001c0001t0060g0037 a0001c0001t0064g0085 a0001c0001t0069g0027 a0001c0001t0074g0069 a0001c0001t0075g0030 a0001c0001t0076g0024	14	96	0.1458	8	c.-12 others(27): Show c.-12+10793_-12+10800dupATAAATAA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	5/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71308749	A A	ATGTGTGT others(1): Show ATGTGTGTG	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG03239.hp2 HG03704.hp1 others(1): Show HG02723.hp2 HG03239.hp2 HG03704.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0050 a0001c0001t0053 others(1): Show a0001c0001t0036 a0001c0001t0050 a0001c0001t0053 a0001c0001t0064	a0001c0001t0036g0094 a0001c0001t0050g0095 a0001c0001t0053g0074 others(1): Show a0001c0001t0036g0094 a0001c0001t0050g0095 a0001c0001t0053g0074 a0001c0001t0064g0085	4	96	0.0417	8	c.-72 others(25): Show c.-72-8877_-72-8870dupCACACACA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71308804	T T	TGTGTGTG others(1): Show TGTGTGTGG	intron_variant intron_variant	MODIFIER	HG02451.hp2 NA20129.hp2 HG02451.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0057 a0001c0001t0006 a0001c0001t0057	a0001c0001t0006g0054 a0001c0001t0057g0048 a0001c0001t0006g0054 a0001c0001t0057g0048	2	96	0.0208	8	c.-72 others(25): Show c.-72-8925_-72-8924insCCACACAC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71314528	A A	AATATATA others(1): Show AATATATAT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02055.hp1 HG02809.hp1 others(3): Show HG00735.hp2 HG02055.hp1 HG02809.hp1 HG02818.hp1 HG03209.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0046 a0001c0001t0081	a0001c0001t0001g0021 a0001c0001t0003g0026 a0001c0001t0003g0086 others(3): Show a0001c0001t0001g0021 a0001c0001t0003g0026 a0001c0001t0003g0086 a0001c0001t0008g0036 a0001c0001t0046g0017 a0001c0001t0081g0018	6	96	0.0625	8	c.-72 others(27): Show c.-72-14649_-72-14648insATATATAT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71328974	T T	TAAAAAAA others(1): Show TAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01169.hp2 HG02922.hp1 others(2): Show HG00639.hp1 HG01169.hp2 HG02922.hp1 HG03098.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0054 a0001c0001t0061 others(2): Show a0001c0001t0038 a0001c0001t0054 a0001c0001t0061 a0001c0001t0075 a0001c0001t0079	a0001c0001t0038g0013 a0001c0001t0054g0058 a0001c0001t0061g0077 others(2): Show a0001c0001t0038g0013 a0001c0001t0054g0058 a0001c0001t0061g0077 a0001c0001t0075g0030 a0001c0001t0079g0014	5	96	0.0521	8	c.-72 others(27): Show c.-72-29102_-72-29095dupTTTTTTTT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	4/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71396973	T T	TACATACA others(1): Show TACATACAC	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA19030.hp2 NA19043.hp1 NA18906.hp2 NA19030.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0036 a0001c0001t0072 a0001c0001t0016 a0001c0001t0036 a0001c0001t0072	a0001c0001t0016g0041 a0001c0001t0036g0094 a0001c0001t0072g0005 a0001c0001t0016g0041 a0001c0001t0036g0094 a0001c0001t0072g0005	3	96	0.0313	8	c.-16 others(29): Show c.-167-37730_-167-37729insGTGTATGT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71396973	T T	TATATACA others(1): Show TATATACAC	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG03130.hp2 HG03139.hp1 others(2): Show HG02109.hp2 HG03130.hp2 HG03139.hp1 HG03453.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0022 a0001c0001t0023 others(2): Show a0001c0001t0002 a0001c0001t0022 a0001c0001t0023 a0001c0001t0034 a0001c0001t0068	a0001c0001t0002g0051 a0001c0001t0022g0047 a0001c0001t0023g0045 others(2): Show a0001c0001t0002g0051 a0001c0001t0022g0047 a0001c0001t0023g0045 a0001c0001t0034g0040 a0001c0001t0068g0096	5	96	0.0521	8	c.-16 others(29): Show c.-167-37730_-167-37729insGTGTATAT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71404117	T T	TTCTTTTT others(1): Show TTCTTTTTC	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00735.hp1 HG01109.hp2 others(20): Show HG00639.hp1 HG00735.hp1 HG01109.hp2 HG01169.hp2 HG01516.hp2 HG01884.hp1 HG02109.hp1 HG02145.hp1 HG02451.hp2 HG02486.hp2 HG02647.hp1 HG02717.hp1 HG02922.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03239.hp1 HG03453.hp1 HG03704.hp2 HG04228.hp1 NA18906.hp1 NA20129.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(19): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0024 a0001c0001t0028 a0001c0001t0034 a0001c0001t0048 a0001c0001t0054 a0001c0001t0056 a0001c0001t0057 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0065 a0001c0001t0069 a0001c0001t0075 a0001c0001t0082	a0001c0001t0002g0051 a0001c0001t0003g0086 a0001c0001t0006g0054 others(20): Show a0001c0001t0002g0051 a0001c0001t0003g0086 a0001c0001t0006g0054 a0001c0001t0009g0016 a0001c0001t0009g0029 a0001c0001t0017g0052 a0001c0001t0019g0088 a0001c0001t0020g0010 a0001c0001t0022g0047 a0001c0001t0024g0055 a0001c0001t0028g0049 a0001c0001t0034g0040 a0001c0001t0048g0031 a0001c0001t0054g0058 a0001c0001t0056g0093 a0001c0001t0057g0048 a0001c0001t0060g0037 a0001c0001t0061g0077 a0001c0001t0062g0034 a0001c0001t0065g0035 a0001c0001t0069g0027 a0001c0001t0075g0030 a0001c0001t0082g0007	23	96	0.2396	8	c.-16 others(29): Show c.-167-44874_-167-44873insGAAAAAGA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71406403	G G	GTATATAT others(1): Show GTATATATA	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02055.hp2 HG01169.hp1 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0067 a0001c0001t0047 a0001c0001t0067	a0001c0001t0047g0068 a0001c0001t0067g0006 a0001c0001t0047g0068 a0001c0001t0067g0006	2	96	0.0208	8	c.-16 others(29): Show c.-167-47160_-167-47159insTATATATA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71413259	G G	GACACACA others(1): Show GACACACAC	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02109.hp1 NA21309.hp2 HG02055.hp2 HG02109.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0067 a0001c0001t0082 a0001c0001t0032 a0001c0001t0067 a0001c0001t0082	a0001c0001t0032g0089 a0001c0001t0067g0006 a0001c0001t0082g0007 a0001c0001t0032g0089 a0001c0001t0067g0006 a0001c0001t0082g0007	3	96	0.0313	8	c.-16 others(29): Show c.-167-54023_-167-54016dupGTGTGTGT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71413290	A A	ACACACAC others(1): Show ACACACACC	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG02132.hp2 HG03704.hp1 HG01071.hp2 HG02132.hp2 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0049 a0001c0001t0053 a0001c0001t0002 a0001c0001t0049 a0001c0001t0053	a0001c0001t0002g0080 a0001c0001t0049g0070 a0001c0001t0053g0074 a0001c0001t0002g0080 a0001c0001t0049g0070 a0001c0001t0053g0074	3	96	0.0313	8	c.-16 others(29): Show c.-167-54047_-167-54046insGGTGTGTG	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71434631	G G	GGTGTGTG others(1): Show GGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01516.hp2 HG01884.hp2 HG02897.hp1 others(2): Show HG01516.hp2 HG01884.hp2 HG02897.hp1 HG03139.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0019 a0001c0001t0045 others(2): Show a0001c0001t0001 a0001c0001t0019 a0001c0001t0045 a0001c0001t0066 a0001c0001t0076	a0001c0001t0001g0044 a0001c0001t0019g0088 a0001c0001t0045g0043 others(2): Show a0001c0001t0001g0044 a0001c0001t0019g0088 a0001c0001t0045g0043 a0001c0001t0066g0023 a0001c0001t0076g0024	5	96	0.0521	8	c.-16 others(29): Show c.-168+58787_-168+58794dupACACACAC	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71434631	G G	GTTGTGTG others(1): Show GTTGTGTGT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG06807.hp1 HG02145.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0020 a0001c0001t0004 a0001c0001t0020	a0001c0001t0004g0009 a0001c0001t0020g0010 a0001c0001t0004g0009 a0001c0001t0020g0010	2	96	0.0208	8	c.-16 others(29): Show c.-168+58794_-168+58795insACACACAA	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71435240	G G	GAGGAAGG others(1): Show GAGGAAGGA	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG02922.hp1 HG03209.hp2 others(2): Show HG01169.hp1 HG02922.hp1 HG03209.hp2 HG03239.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0047 others(2): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0047 a0001c0001t0056 a0001c0001t0061	a0001c0001t0003g0086 a0001c0001t0004g0009 a0001c0001t0047g0068 others(2): Show a0001c0001t0003g0086 a0001c0001t0004g0009 a0001c0001t0047g0068 a0001c0001t0056g0093 a0001c0001t0061g0077	5	96	0.0521	8	c.-16 others(29): Show c.-168+58178_-168+58185dupTCCTTCCT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP1_chr3_70949708_71588728	71435968	A A	AAAGGAGG others(1): Show AAAGGAGGG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01071.hp2 HG01109.hp2 others(28): Show HG00639.hp1 HG01071.hp2 HG01109.hp2 HG01169.hp1 HG01169.hp2 HG01516.hp1 HG01516.hp2 HG02055.hp1 HG02109.hp1 HG02132.hp2 HG02451.hp1 HG02486.hp1 HG02486.hp2 HG02622.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02809.hp2 HG02922.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03239.hp1 HG03540.hp1 HG03579.hp1 HG03704.hp2 HG04228.hp1 NA18906.hp1 NA19030.hp1 NA19043.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(27): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0019 a0001c0001t0021 a0001c0001t0026 a0001c0001t0028 a0001c0001t0033 a0001c0001t0040 a0001c0001t0041 a0001c0001t0047 a0001c0001t0048 a0001c0001t0049 a0001c0001t0054 a0001c0001t0056 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0065 a0001c0001t0066 a0001c0001t0068 a0001c0001t0069 a0001c0001t0071 a0001c0001t0075 a0001c0001t0076 a0001c0001t0082 a0001c0001t0084	a0001c0001t0002g0080 a0001c0001t0003g0086 a0001c0001t0004g0056 others(28): Show a0001c0001t0002g0080 a0001c0001t0003g0086 a0001c0001t0004g0056 a0001c0001t0006g0092 a0001c0001t0008g0036 a0001c0001t0008g0039 a0001c0001t0009g0029 a0001c0001t0019g0088 a0001c0001t0021g0042 a0001c0001t0026g0083 a0001c0001t0028g0049 a0001c0001t0033g0057 a0001c0001t0040g0033 a0001c0001t0041g0090 a0001c0001t0047g0068 a0001c0001t0048g0031 a0001c0001t0049g0070 a0001c0001t0054g0058 a0001c0001t0056g0093 a0001c0001t0060g0037 a0001c0001t0061g0077 a0001c0001t0062g0034 a0001c0001t0065g0035 a0001c0001t0066g0023 a0001c0001t0068g0096 a0001c0001t0069g0027 a0001c0001t0071g0064 a0001c0001t0075g0030 a0001c0001t0076g0024 a0001c0001t0082g0007 a0001c0001t0084g0061	31	96	0.3229	8	c.-16 others(29): Show c.-168+57450_-168+57457dupCCCTCCTT	FOXP1	ENSG00000114861.24	transcript	ENST00000649528.3	protein_coding	3/20			chr3	TogoVar
FOXP2_chr7_114409815_114698765	114416440	A A	AAATTTCA others(1): Show AAATTTCAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00423.hp1 others(55): Show HG00099.hp2 HG00140.hp1 HG00423.hp1 HG00423.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG01070.hp2 HG01071.hp1 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01981.hp1 HG02040.hp2 HG02071.hp2 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02683.hp1 HG02698.hp1 HG02818.hp1 HG03041.hp1 HG03130.hp1 HG03209.hp1 HG03453.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG04204.hp2 NA18612.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp2 NA18957.hp1 NA18961.hp2 NA18970.hp2 NA18979.hp2 NA18989.hp1 NA19012.hp1 NA19012.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0017 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 others(54): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0026 a0001c0001t0001g0033 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0002g0001 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0036 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0003g0009 a0001c0001t0003g0015 a0001c0001t0003g0021 a0001c0001t0003g0023 a0001c0001t0003g0034 a0001c0001t0003g0035 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0045 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0052 a0001c0001t0003g0058 a0001c0001t0004g0005 a0001c0001t0004g0008 a0001c0001t0004g0014 a0001c0001t0004g0016 a0001c0001t0004g0032 a0001c0001t0004g0042 a0001c0001t0004g0048 a0001c0001t0004g0051 a0001c0001t0006g0010 a0001c0001t0017g0031 a0001c0001t0020g0047 a0001c0001t0022g0043 a0001c0001t0023g0018 a0001c0001t0025g0012 a0001c0001t0026g0011 a0001c0001t0027g0030 a0001c0001t0028g0040	58	174	0.3333	8	c.-11 others(25): Show c.-11+1081_-11+1088dupAATTTCAT	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXP2_chr7_114409815_114698765	114481762	C C	CTCTATCT others(1): Show CTCTATCTA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01106.hp2 HG01981.hp1 others(5): Show HG00642.hp1 HG01106.hp2 HG01981.hp1 HG02280.hp2 HG02602.hp1 HG02723.hp1 NA19012.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0003t0006	a0001c0001t0001g0118 a0001c0001t0001g0164 a0001c0001t0002g0017 others(5): Show a0001c0001t0001g0118 a0001c0001t0001g0164 a0001c0001t0002g0017 a0001c0001t0002g0036 a0001c0001t0002g0124 a0001c0001t0003g0049 a0001c0001t0004g0014 a0001c0003t0006g0150	8	174	0.0460	8	c.169 others(27): Show c.169-52813_169-52806dupCTATCTAT	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXP2_chr7_114409815_114698765	114526172	T T	TAAAAAAA others(1): Show TAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG01070.hp2 HG01071.hp1 others(12): Show HG00673.hp1 HG01070.hp2 HG01071.hp1 HG01981.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG03492.hp1 HG03688.hp2 HG03710.hp2 NA18951.hp2 NA18957.hp1 NA18989.hp1 NA19083.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0023 a0001c0001t0024	a0001c0001t0002g0001 a0001c0001t0002g0013 a0001c0001t0002g0017 others(11): Show a0001c0001t0002g0001 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0024 a0001c0001t0003g0023 a0001c0001t0003g0045 a0001c0001t0004g0014 a0001c0001t0004g0051 a0001c0001t0004g0088 a0001c0001t0007g0141 a0001c0001t0023g0018 a0001c0001t0024g0132	15	174	0.0862	8	c.169 others(25): Show c.169-8429_169-8422dupAAAAAAAA	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXP2_chr7_114409815_114698765	114557787	C C	CTTTATTT others(1): Show CTTTATTTA	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03098.hp2 HG03209.hp2 others(2): Show HG02818.hp2 HG03098.hp2 HG03209.hp2 NA19240.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 a0001c0001t0001 a0001c0001t0006 a0001c0001t0009	a0001c0001t0001g0065 a0001c0001t0001g0101 a0001c0001t0006g0070 others(2): Show a0001c0001t0001g0065 a0001c0001t0001g0101 a0001c0001t0006g0070 a0001c0001t0006g0121 a0001c0001t0009g0064	5	174	0.0287	8	c.258 others(27): Show c.258+23114_258+23121dupTTTATTTA	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXP2_chr7_114409815_114698765	114581075	G G	GCACACAC others(1): Show GCACACACA	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG03130.hp1 HG03209.hp1 others(1): Show HG00642.hp1 HG03130.hp1 HG03209.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0033 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0033 a0001c0001t0001g0164	4	174	0.0230	8	c.258 others(27): Show c.258+46394_258+46401dupCACACACA	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXP2_chr7_114409815_114698765	114642779	A A	AATATATA others(1): Show AATATATAT	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG03688.hp2 NA19083.hp1 HG02602.hp1 HG03688.hp2 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0017 a0001c0001t0002g0019 a0001c0001t0004g0051 a0001c0001t0002g0017 a0001c0001t0002g0019 a0001c0001t0004g0051	3	174	0.0172	8	c.989 others(23): Show c.989+183_989+190dupATATATAT	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	7/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXP2_chr7_114409815_114698765	114688208	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02602.hp1 HG02723.hp1 others(4): Show HG02258.hp1 HG02602.hp1 HG02723.hp1 HG02976.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0016 a0001c0001t0023 others(1): Show a0001c0001t0002 a0001c0001t0016 a0001c0001t0023 a0001c0002t0002	a0001c0001t0002g0017 a0001c0001t0002g0082 a0001c0001t0002g0087 others(4): Show a0001c0001t0002g0017 a0001c0001t0002g0082 a0001c0001t0002g0087 a0001c0001t0002g0124 a0001c0001t0016g0169 a0001c0001t0023g0018 a0001c0002t0002g0102	7	174	0.0402	8	c.200 others(27): Show c.2004-1542_2004-1535dupCACACACA	FOXP2	ENSG00000128573.28	transcript	ENST00000350908.9	protein_coding	16/16		INFO_REALIGN_3_PRIME	chr7	TogoVar
FOXP3_chrX_49245438_49269710	49262304	A A	AGTGTGGC others(1): Show AGTGTGGCC	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0008 a0008	a0008c0007 a0008c0007	a0008c0007t0008 a0008c0007t0008	a0008c0007t0008g0153 a0008c0007t0008g0153	1	299	0.0033	8	c.-23 others(25): Show c.-23+2349_-23+2356dupGGCCACAC	FOXP3	ENSG00000049768.18	transcript	ENST00000376207.10	protein_coding	1/11			chrX	TogoVar
FOXP4_chr6_41541381_41607384	41570079	G G	GACACACA others(1): Show GACACACAC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01123.hp2 HG01928.hp1 others(10): Show HG00280.hp1 HG01123.hp2 HG01928.hp1 HG01975.hp2 HG02129.hp2 HG02273.hp1 HG03831.hp1 NA18939.hp2 NA18985.hp2 NA18986.hp1 NA18989.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0005 a0001c0002 a0001c0003 a0001c0005	a0001c0002t0003 a0001c0002t0007 a0001c0003t0006 others(1): Show a0001c0002t0003 a0001c0002t0007 a0001c0003t0006 a0001c0005t0002	a0001c0002t0003g0023 a0001c0002t0003g0123 a0001c0002t0003g0124 others(9): Show a0001c0002t0003g0023 a0001c0002t0003g0123 a0001c0002t0003g0124 a0001c0002t0003g0148 a0001c0002t0003g0149 a0001c0002t0007g0019 a0001c0002t0007g0023 a0001c0002t0007g0131 a0001c0002t0007g0146 a0001c0002t0007g0147 a0001c0003t0006g0292 a0001c0005t0002g0095	13	356	0.0365	8	c.204 others(25): Show c.204+4146_204+4153dupACACACAC	FOXP4	ENSG00000137166.18	transcript	ENST00000307972.10	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
FOXQ1_chr6_1307098_1319758	1316869	G G	GCCCAGGC others(1): Show GCCCAGGCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp2 HG01069.hp2 HG01071.hp2 HG00733.hp2 HG01069.hp2 HG01071.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0000 a0002c0004t0001g0000	3	406	0.0074	8	c.29 others(19): Show c.2953_*2954insCCCAGGCC	FOXQ1	ENSG00000164379.7	transcript	ENST00000296839.5	protein_coding		2112		chr6	TogoVar
FOXR1_chr11_118966761_118986287	118969552	G G	GGGAAGGA others(1): Show GGGAAGGAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01099.hp1 HG02055.hp1 HG02055.hp2 others(12): Show HG01099.hp1 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02647.hp1 HG02717.hp2 HG02886.hp1 HG03098.hp1 HG03209.hp1 HG03225.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp2 NA19030.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0082 others(1): Show a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0082 a0001c0001t0001g0084	15	430	0.0349	8	c.-23 others(19): Show c.-2380_-2379insGGAAGGAA	FOXR1	ENSG00000176302.13	transcript	ENST00000317011.8	protein_coding		2208		chr11	TogoVar
FOXR1_chr11_118966761_118986287	118969552	G G	GGGAAGGG others(1): Show GGGAAGGGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00438.hp2 others(93): Show HG00099.hp2 HG00140.hp2 HG00438.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01106.hp2 HG01109.hp2 HG01168.hp2 HG01169.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01934.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02074.hp1 HG02083.hp2 HG02129.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02165.hp1 HG02258.hp2 HG02273.hp1 HG02293.hp2 HG02451.hp1 HG02523.hp2 HG02683.hp1 HG02683.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG03041.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03239.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03688.hp1 HG03704.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18906.hp1 NA18939.hp2 NA18941.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp1 NA18956.hp1 NA18960.hp1 NA18961.hp1 NA18964.hp1 NA18968.hp2 NA18969.hp1 NA18973.hp2 NA18984.hp1 NA18990.hp2 NA18994.hp1 NA18999.hp1 NA19004.hp2 NA19007.hp1 NA19056.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp1 NA19078.hp2 NA19082.hp2 NA19240.hp2 NA20752.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0003 a0003c0004 a0001c0001 a0002c0003 a0003c0004	a0001c0001t0001 a0002c0003t0001 a0003c0004t0001 a0001c0001t0001 a0002c0003t0001 a0003c0004t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0013 others(13): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0013 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0062 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0002c0003t0001g0013 a0002c0003t0001g0035 a0002c0003t0001g0099 a0003c0004t0001g0005	96	430	0.2233	8	c.-23 others(19): Show c.-2380_-2379insGGAAGGGA	FOXR1	ENSG00000176302.13	transcript	ENST00000317011.8	protein_coding		2208		chr11	TogoVar
FOXR1_chr11_118966761_118986287	118969572	A A	AGAAGGAA others(1): Show AGAAGGAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02922.hp1 HG02970.hp1 others(2): Show HG02258.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0054 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0054	5	430	0.0116	8	c.-23 others(19): Show c.-2360_-2359insGAAGGAAG	FOXR1	ENSG00000176302.13	transcript	ENST00000317011.8	protein_coding		2188		chr11	TogoVar
FOXR2_chrX_55618400_55631192	55619232	T T	TACACACA others(1): Show TACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp1 NA19070.hp1 NA19043.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	325	0.0062	8	c.-44 others(19): Show c.-4480_-4479insACACACAC	FOXR2	ENSG00000189299.7	transcript	ENST00000339140.5	protein_coding		4167		chrX	TogoVar
FOXR2_chrX_55618400_55631192	55619234	T T	TACACACA others(1): Show TACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00438.hp2 HG00597.hp1 others(95): Show HG00323.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01123.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01361.hp1 HG01517.hp1 HG01934.hp1 HG01952.hp1 HG02015.hp1 HG02056.hp1 HG02074.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp1 HG02155.hp1 HG02165.hp2 HG02257.hp2 HG02523.hp1 HG02602.hp1 HG02735.hp1 HG02970.hp2 HG03017.hp1 HG03239.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp1 HG03831.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp1 NA18747.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18947.hp1 NA18950.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18968.hp1 NA18969.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18981.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18992.hp2 NA18994.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19001.hp2 NA19003.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19012.hp1 NA19055.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19067.hp1 NA19068.hp1 NA19074.hp1 NA19079.hp1 NA19080.hp1 NA19082.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0011 a0001c0001t0013 others(2): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0013 a0001c0003t0001 a0002c0002t0001	a0001c0001t0001g0000 a0001c0001t0011g0000 a0001c0001t0013g0000 others(2): Show a0001c0001t0001g0000 a0001c0001t0011g0000 a0001c0001t0013g0000 a0001c0003t0001g0000 a0002c0002t0001g0000	98	325	0.3015	8	c.-44 others(19): Show c.-4478_-4477insACACACAC	FOXR2	ENSG00000189299.7	transcript	ENST00000339140.5	protein_coding		4165		chrX	TogoVar
FOXR2_chrX_55618400_55631192	55619234	T T	TATACACA others(1): Show TATACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp1 HG04199.hp1 NA18951.hp1 others(8): Show HG01256.hp1 HG04199.hp1 NA18951.hp1 NA18953.hp1 NA18955.hp1 NA18959.hp1 NA18968.hp2 NA18970.hp1 NA19003.hp2 NA19056.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	11	325	0.0339	8	c.-44 others(19): Show c.-4478_-4477insATACACAC	FOXR2	ENSG00000189299.7	transcript	ENST00000339140.5	protein_coding		4165		chrX	TogoVar
FOXRED2_chr22_36482190_36512040	36502192	C C	CAAACAAA others(1): Show CAAACAAAA	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01071.hp2 HG01255.hp1 others(50): Show HG00738.hp1 HG01071.hp2 HG01255.hp1 HG01891.hp2 HG02055.hp1 HG02056.hp2 HG02145.hp2 HG02257.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02630.hp1 HG02647.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp2 HG02897.hp2 HG02965.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18944.hp1 NA18950.hp1 NA18959.hp1 NA18960.hp2 NA18965.hp1 NA18968.hp2 NA18970.hp1 NA18974.hp2 NA18980.hp2 NA18986.hp1 NA18987.hp2 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA19003.hp1 NA19043.hp1 NA19063.hp1 NA19070.hp2 NA19078.hp1 NA19079.hp2 NA19084.hp2 NA19085.hp2 NA19091.hp2	a0001 a0005 a0011 others(1): Show a0001 a0005 a0011 a0013	a0001c0001 a0001c0004 a0001c0017 others(3): Show a0001c0001 a0001c0004 a0001c0017 a0005c0007 a0011c0014 a0013c0019	a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 others(9): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0001c0001t0015 a0001c0001t0033 a0001c0004t0003 a0001c0004t0032 a0001c0017t0003 a0005c0007t0003 a0005c0007t0005 a0011c0014t0009 a0013c0019t0006	a0001c0001t0003g0005 a0001c0001t0003g0032 a0001c0001t0003g0091 others(21): Show a0001c0001t0003g0005 a0001c0001t0003g0032 a0001c0001t0003g0091 a0001c0001t0003g0093 a0001c0001t0003g0094 a0001c0001t0003g0108 a0001c0001t0005g0003 a0001c0001t0005g0078 a0001c0001t0005g0098 a0001c0001t0009g0082 a0001c0001t0015g0079 a0001c0001t0033g0092 a0001c0004t0003g0015 a0001c0004t0003g0016 a0001c0004t0003g0071 a0001c0004t0003g0097 a0001c0004t0003g0107 a0001c0004t0032g0096 a0001c0017t0003g0095 a0005c0007t0003g0088 a0005c0007t0005g0077 a0011c0014t0009g0080 a0011c0014t0009g0081 a0013c0019t0006g0083	53	320	0.1656	8	c.105 others(25): Show c.1050-786_1050-785insTTTTGTTT	FOXRED2	ENSG00000100350.16	transcript	ENST00000397224.9	protein_coding	4/8			chr22	TogoVar
FOXRED2_chr22_36482190_36512040	36509035	C C	CAAAAAAA others(1): Show CAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp1 HG01884.hp2 HG02451.hp2 others(12): Show HG01168.hp1 HG01884.hp2 HG02451.hp2 HG02572.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp1 HG02886.hp1 HG02970.hp2 HG03041.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp2 HG03579.hp2 NA19030.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0003 a0004c0005 a0001c0001 a0003c0003 a0004c0005	a0001c0001t0010 a0003c0003t0004 a0003c0003t0020 others(1): Show a0001c0001t0010 a0003c0003t0004 a0003c0003t0020 a0004c0005t0001	a0001c0001t0010g0014 a0003c0003t0004g0006 a0003c0003t0004g0013 others(5): Show a0001c0001t0010g0014 a0003c0003t0004g0006 a0003c0003t0004g0013 a0003c0003t0004g0041 a0003c0003t0004g0062 a0003c0003t0020g0060 a0004c0005t0001g0073 a0004c0005t0001g0075	15	320	0.0469	8	c.-20 others(19): Show c.-2029_-2028insTTTTTTTT	FOXRED2	ENSG00000100350.16	transcript	ENST00000397224.9	protein_coding		1996		chr22	TogoVar
FOXS1_chr20_31839303_31850604	31846442	T T	TAGAGAGA others(1): Show TAGAGAGAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01167.hp1 HG01169.hp1 others(4): Show HG00738.hp1 HG01167.hp1 HG01169.hp1 HG01884.hp1 HG03130.hp2 HG03516.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	7	380	0.0184	8	c.-90 others(17): Show c.-901_-900insCTCTCTCT	FOXS1	ENSG00000179772.8	transcript	ENST00000375978.5	protein_coding		839		chr20	TogoVar
FPR1_chr19_51740773_51756878	51741341	C C	CAAATAAA others(1): Show CAAATAAAT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG00642.hp1 HG01081.hp1 others(5): Show HG00639.hp2 HG00642.hp1 HG01081.hp1 HG01261.hp1 HG02004.hp2 HG04184.hp1 NA18994.hp2 NA19077.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0024 a0001c0001 a0005c0024	a0001c0001t0001 a0005c0024t0001 a0001c0001t0001 a0005c0024t0001	a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0001t0001g0151 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0001t0001g0151 a0005c0024t0001g0143	8	486	0.0165	8	c.46 others(19): Show c.4600_*4601insATTTATTT	FPR1	ENSG00000171051.10	transcript	ENST00000304748.5	protein_coding		4431		chr19	TogoVar
FPR3_chr19_51790157_51831190	51795504	C C	CTTTTTTT others(1): Show CTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02145.hp1 HG02895.hp1 others(8): Show HG02109.hp2 HG02145.hp1 HG02895.hp1 HG02895.hp2 HG03195.hp1 HG03471.hp2 HG04115.hp1 NA18522.hp1 NA18612.hp2 NA19062.hp2 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0002t0002	a0001c0001t0001g0017 a0001c0001t0001g0038 a0001c0001t0001g0189 others(5): Show a0001c0001t0001g0017 a0001c0001t0001g0038 a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0003g0191 a0001c0001t0006g0194 a0001c0002t0002g0190	11	416	0.0264	8	c.-11 others(23): Show c.-11+195_-11+202dupTTTTTTTT	FPR3	ENSG00000187474.5	transcript	ENST00000339223.5	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr19	TogoVar
FPR3_chr19_51790157_51831190	51797877	C C	CTTTTTTT others(1): Show CTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00597.hp2 others(92): Show HG00408.hp1 HG00423.hp2 HG00597.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG01069.hp2 HG01074.hp1 HG01099.hp1 HG01099.hp2 HG01123.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp2 HG01496.hp2 HG01517.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG02004.hp2 HG02056.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp2 HG02165.hp1 HG02300.hp2 HG02523.hp1 HG02647.hp1 HG02698.hp2 HG02895.hp2 HG03195.hp1 HG03209.hp2 HG03239.hp1 HG03471.hp2 HG03654.hp1 HG03654.hp2 HG03942.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp1 NA18939.hp1 NA18940.hp2 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18952.hp2 NA18954.hp2 NA18955.hp1 NA18959.hp2 NA18962.hp2 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18968.hp1 NA18970.hp2 NA18972.hp1 NA18973.hp1 NA18974.hp2 NA18980.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18987.hp1 NA18989.hp2 NA18997.hp2 NA18998.hp2 NA19000.hp1 NA19001.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp2 NA19010.hp1 NA19055.hp1 NA19055.hp2 NA19058.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19078.hp2 NA19082.hp1 NA19082.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 others(3): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0010 a0001c0001t0014 a0001c0001t0024 a0001c0002t0002	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0017 others(62): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0017 a0001c0001t0001g0039 a0001c0001t0001g0087 a0001c0001t0001g0186 a0001c0001t0001g0192 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0215 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0243 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0257 a0001c0001t0001g0270 a0001c0001t0001g0274 a0001c0001t0001g0298 a0001c0001t0006g0202 a0001c0001t0006g0213 a0001c0001t0006g0242 a0001c0001t0006g0244 a0001c0001t0010g0214 a0001c0001t0014g0224 a0001c0001t0024g0226 a0001c0002t0002g0002 a0001c0002t0002g0005 a0001c0002t0002g0018 a0001c0002t0002g0019 a0001c0002t0002g0040 a0001c0002t0002g0041 a0001c0002t0002g0044 a0001c0002t0002g0086 a0001c0002t0002g0177 a0001c0002t0002g0199 a0001c0002t0002g0200 a0001c0002t0002g0201 a0001c0002t0002g0216 a0001c0002t0002g0217 a0001c0002t0002g0218 a0001c0002t0002g0219 a0001c0002t0002g0220 a0001c0002t0002g0221 a0001c0002t0002g0222 a0001c0002t0002g0223 a0001c0002t0002g0234 a0001c0002t0002g0245 a0001c0002t0002g0246 a0001c0002t0002g0247 a0001c0002t0002g0248 a0001c0002t0002g0249 a0001c0002t0002g0250 a0001c0002t0002g0251 a0001c0002t0002g0260 a0001c0002t0002g0261 a0001c0002t0002g0262 a0001c0002t0002g0265 a0001c0002t0002g0266 a0001c0002t0002g0286	95	416	0.2284	8	c.-11 others(25): Show c.-11+2562_-11+2569dupTTTTTTTT	FPR3	ENSG00000187474.5	transcript	ENST00000339223.5	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr19	TogoVar
FPR3_chr19_51790157_51831190	51813119	A A	AACACACA others(1): Show AACACACAC	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00639.hp2 HG01123.hp2 others(4): Show HG00621.hp2 HG00639.hp2 HG01123.hp2 HG01255.hp1 HG01361.hp1 HG01952.hp1 HG01975.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0008 a0001c0002t0002 a0001c0002t0008	a0001c0002t0002g0005 a0001c0002t0002g0088 a0001c0002t0008g0174 a0001c0002t0002g0005 a0001c0002t0002g0088 a0001c0002t0008g0174	7	416	0.0168	8	c.-10 others(27): Show c.-10-10585_-10-10578dupACACACAC	FPR3	ENSG00000187474.5	transcript	ENST00000339223.5	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr19	TogoVar
FRA10AC1_chr10_93662883_93707592	93693673	C C	CATATATA others(1): Show CATATATAT	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02886.hp2 NA18939.hp1 others(9): Show HG02055.hp2 HG02886.hp2 NA18939.hp1 NA18942.hp1 NA18954.hp1 NA18955.hp2 NA18957.hp2 NA18959.hp1 NA18963.hp1 NA19010.hp1 NA19011.hp1 NA19087.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0005 a0002c0002 a0005c0005	a0002c0002t0001 a0005c0005t0001 a0002c0002t0001 a0005c0005t0001	a0002c0002t0001g0025 a0002c0002t0001g0157 a0002c0002t0001g0164 others(7): Show a0002c0002t0001g0025 a0002c0002t0001g0157 a0002c0002t0001g0164 a0002c0002t0001g0189 a0002c0002t0001g0190 a0002c0002t0001g0191 a0002c0002t0001g0192 a0002c0002t0001g0200 a0002c0002t0001g0201 a0005c0005t0001g0162	12	364	0.0330	8	c.297 others(23): Show c.297-952_297-945dupATATATAT	FRA10AC1	ENSG00000148690.12	transcript	ENST00000359204.5	protein_coding	5/13			chr10	TogoVar
FRAS1_chr4_78052323_78549269	78053790	T T	TGATAGAT others(1): Show TGATAGATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG03486.hp2 NA18522.hp2 HG00408.hp2 HG03486.hp2 NA18522.hp2	a0003 a0017 a0080 a0003 a0017 a0080	a0003c0002 a0017c0012 a0080c0113 a0003c0002 a0017c0012 a0080c0113	a0003c0002t0049 a0017c0012t0008 a0080c0113t0025 a0003c0002t0049 a0017c0012t0008 a0080c0113t0025	a0003c0002t0049g0007 a0017c0012t0008g0095 a0080c0113t0025g0119 a0003c0002t0049g0007 a0017c0012t0008g0095 a0080c0113t0025g0119	3	178	0.0169	8	c.-42 others(19): Show c.-4220_-4219insGATAGATA	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding		3532		chr4	TogoVar
FRAS1_chr4_78052323_78549269	78077197	A A	AACACACA others(1): Show AACACACAC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02922.hp2 HG01884.hp2 HG02922.hp2	a0005 a0081 a0005 a0081	a0005c0004 a0081c0109 a0005c0004 a0081c0109	a0005c0004t0003 a0081c0109t0006 a0005c0004t0003 a0081c0109t0006	a0005c0004t0003g0082 a0081c0109t0006g0083 a0005c0004t0003g0082 a0081c0109t0006g0083	2	178	0.0112	8	c.108 others(27): Show c.108+11197_108+11204dupCACACACA	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	2/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FRAS1_chr4_78052323_78549269	78183732	T T	TTGTGTGT others(1): Show TTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00738.hp1 HG01071.hp1 others(7): Show HG00558.hp1 HG00738.hp1 HG01071.hp1 HG02056.hp1 HG02258.hp1 HG02818.hp1 HG03017.hp1 HG03491.hp2 HG04115.hp1 NA21309.hp2	a0002 a0003 a0005 others(6): Show a0002 a0003 a0005 a0009 a0012 a0032 a0039 a0071 a0074	a0002c0052 a0003c0002 a0003c0033 others(7): Show a0002c0052 a0003c0002 a0003c0033 a0005c0004 a0009c0096 a0012c0046 a0032c0036 a0039c0049 a0071c0104 a0074c0100	a0002c0052t0001 a0003c0002t0002 a0003c0033t0003 others(7): Show a0002c0052t0001 a0003c0002t0002 a0003c0033t0003 a0005c0004t0022 a0009c0096t0034 a0012c0046t0005 a0032c0036t0005 a0039c0049t0048 a0071c0104t0051 a0074c0100t0012	a0002c0052t0001g0061 a0003c0002t0002g0021 a0003c0033t0003g0059 others(7): Show a0002c0052t0001g0061 a0003c0002t0002g0021 a0003c0033t0003g0059 a0005c0004t0022g0122 a0009c0096t0034g0141 a0012c0046t0005g0044 a0032c0036t0005g0022 a0039c0049t0048g0043 a0071c0104t0051g0127 a0074c0100t0012g0160	10	178	0.0562	8	c.109 others(27): Show c.109-53742_109-53735dupGTGTGTGT	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	2/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FRAS1_chr4_78052323_78549269	78200870	A A	AATATATA others(1): Show AATATATAT	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01099.hp2 HG01109.hp2 others(6): Show HG00323.hp2 HG01099.hp2 HG01109.hp2 HG02109.hp1 HG02258.hp2 HG02572.hp1 HG03139.hp2 HG03834.hp1 NA18962.hp1	a0001 a0003 a0009 others(5): Show a0001 a0003 a0009 a0022 a0028 a0033 a0064 a0073	a0001c0001 a0003c0002 a0009c0020 others(5): Show a0001c0001 a0003c0002 a0009c0020 a0022c0022 a0028c0038 a0033c0035 a0064c0084 a0073c0091	a0001c0001t0009 a0003c0002t0002 a0009c0020t0025 others(5): Show a0001c0001t0009 a0003c0002t0002 a0009c0020t0025 a0022c0022t0018 a0028c0038t0002 a0033c0035t0005 a0064c0084t0004 a0073c0091t0024	a0001c0001t0009g0124 a0001c0001t0009g0132 a0003c0002t0002g0001 others(6): Show a0001c0001t0009g0124 a0001c0001t0009g0132 a0003c0002t0002g0001 a0009c0020t0025g0120 a0022c0022t0018g0102 a0028c0038t0002g0068 a0033c0035t0005g0026 a0064c0084t0004g0156 a0073c0091t0024g0121	9	178	0.0506	8	c.109 others(27): Show c.109-36631_109-36624dupATATATAT	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	2/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FRAS1_chr4_78052323_78549269	78218098	T T	TCACACAC others(1): Show TCACACACA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG03491.hp2 HG03688.hp1 others(2): Show HG00558.hp1 HG03491.hp2 HG03688.hp1 HG03704.hp2 NA18964.hp2	a0002 a0003 a0013 others(1): Show a0002 a0003 a0013 a0046	a0002c0003 a0002c0052 a0003c0033 others(2): Show a0002c0003 a0002c0052 a0003c0033 a0013c0009 a0046c0048	a0002c0003t0001 a0002c0052t0001 a0003c0033t0003 others(2): Show a0002c0003t0001 a0002c0052t0001 a0003c0033t0003 a0013c0009t0020 a0046c0048t0002	a0002c0003t0001g0024 a0002c0052t0001g0061 a0003c0033t0003g0059 others(2): Show a0002c0003t0001g0024 a0002c0052t0001g0061 a0003c0033t0003g0059 a0013c0009t0020g0008 a0046c0048t0002g0035	5	178	0.0281	8	c.109 others(27): Show c.109-19383_109-19376dupCACACACA	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	2/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FRAS1_chr4_78052323_78549269	78218098	T T	TCTCACAC others(1): Show TCTCACACA	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp2 HG02818.hp1 others(1): Show HG02451.hp1 HG02559.hp2 HG02818.hp1 HG06807.hp1	a0005 a0018 a0025 others(1): Show a0005 a0018 a0025 a0068	a0005c0004 a0018c0090 a0025c0011 others(1): Show a0005c0004 a0018c0090 a0025c0011 a0068c0087	a0005c0004t0022 a0018c0090t0033 a0025c0011t0004 others(1): Show a0005c0004t0022 a0018c0090t0033 a0025c0011t0004 a0068c0087t0004	a0005c0004t0022g0122 a0018c0090t0033g0163 a0025c0011t0004g0176 others(1): Show a0005c0004t0022g0122 a0018c0090t0033g0163 a0025c0011t0004g0176 a0068c0087t0004g0162	4	178	0.0225	8	c.109 others(27): Show c.109-19411_109-19410insTCACACAC	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	2/73		INFO_REALIGN_3_PRIME	chr4	TogoVar
FRAS1_chr4_78052323_78549269	78236287	C C	CATTTATT others(1): Show CATTTATTT	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG03491.hp1 NA19070.hp1 HG00408.hp1 HG03491.hp1 NA19070.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0004c0005 a0001c0001 a0002c0003 a0004c0005	a0001c0001t0005 a0002c0003t0001 a0004c0005t0007 a0001c0001t0005 a0002c0003t0001 a0004c0005t0007	a0001c0001t0005g0106 a0002c0003t0001g0005 a0004c0005t0007g0148 a0001c0001t0005g0106 a0002c0003t0001g0005 a0004c0005t0007g0148	3	178	0.0169	8	c.109 others(25): Show c.109-1206_109-1199dupATTTATTT	FRAS1	ENSG00000138759.20	transcript	ENST00000512123.4	protein_coding	2/73		INFO_REALIGN_3_PRIME	chr4	TogoVar

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