Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
GABRG3_chr15_26966181_27546984	27145603	C C	CTCTATCT others(1): Show CTCTATCTA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01496.hp1 HG03492.hp1 HG01109.hp2 HG01496.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0008 a0001c0001 a0001c0006 a0001c0008	a0001c0001t0007 a0001c0006t0003 a0001c0008t0008 a0001c0001t0007 a0001c0006t0003 a0001c0008t0008	a0001c0001t0007g0010 a0001c0006t0003g0008 a0001c0008t0008g0002 a0001c0001t0007g0010 a0001c0006t0003g0008 a0001c0008t0008g0002	3	92	0.0326	8	c.270 others(29): Show c.270+118836_270+118843dupCTATCTAT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27174584	G G	GTCTCTCT others(1): Show GTCTCTCTC	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03453.hp2 NA18522.hp1 others(1): Show HG03195.hp2 HG03453.hp2 NA18522.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0006 others(1): Show a0001c0001 a0001c0005 a0001c0006 a0001c0009	a0001c0001t0021 a0001c0005t0002 a0001c0006t0003 others(1): Show a0001c0001t0021 a0001c0005t0002 a0001c0006t0003 a0001c0009t0010	a0001c0001t0021g0072 a0001c0005t0002g0055 a0001c0006t0003g0069 others(1): Show a0001c0001t0021g0072 a0001c0005t0002g0055 a0001c0006t0003g0069 a0001c0009t0010g0051	4	92	0.0435	8	c.270 others(29): Show c.270+147790_270+147797dupTCTCTCTC	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27209347	T T	TTTCCTTC others(1): Show TTTCCTTCC	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02258.hp2 HG02717.hp2 HG01884.hp2 HG02258.hp2 HG02717.hp2	a0001 a0001	a0001c0006 a0001c0012 a0001c0013 a0001c0006 a0001c0012 a0001c0013	a0001c0006t0003 a0001c0012t0003 a0001c0013t0023 a0001c0006t0003 a0001c0012t0003 a0001c0013t0023	a0001c0006t0003g0020 a0001c0012t0003g0068 a0001c0013t0023g0006 a0001c0006t0003g0020 a0001c0012t0003g0068 a0001c0013t0023g0006	3	92	0.0326	8	c.271 others(29): Show c.271-117446_271-117439dupCTTCCTTC	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27216750	T T	TTTTATTT others(1): Show TTTTATTTA	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01496.hp1 HG01891.hp2 others(5): Show HG01109.hp1 HG01496.hp1 HG01891.hp2 HG03704.hp1 NA18522.hp1 NA18906.hp2 NA19240.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(4): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0003t0009 a0001c0005t0002 a0001c0006t0003 a0001c0007t0001	a0001c0001t0001g0043 a0001c0001t0001g0071 a0001c0002t0001g0029 others(5): Show a0001c0001t0001g0043 a0001c0001t0001g0071 a0001c0002t0001g0029 a0001c0003t0001g0066 a0001c0003t0009g0059 a0001c0005t0002g0055 a0001c0006t0003g0008 a0001c0007t0001g0048	8	92	0.0870	8	c.271 others(29): Show c.271-110043_271-110036dupATTTATTT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27231009	A A	ATGTGTGT others(1): Show ATGTGTGTG	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG06807.hp1 HG01099.hp1 HG06807.hp1	a0001 a0001	a0001c0005 a0001c0016 a0001c0005 a0001c0016	a0001c0005t0005 a0001c0016t0001 a0001c0005t0005 a0001c0016t0001	a0001c0005t0005g0037 a0001c0016t0001g0074 a0001c0005t0005g0037 a0001c0016t0001g0074	2	92	0.0217	8	c.271 others(27): Show c.271-95767_271-95760dupTGTGTGTG	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27248803	C C	CACACACA others(1): Show CACACACAG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02572.hp2 HG03209.hp2 HG02109.hp1 HG02572.hp2 HG03209.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0005 a0001c0004t0030 a0001c0004t0002 a0001c0004t0005 a0001c0004t0030	a0001c0004t0002g0061 a0001c0004t0005g0050 a0001c0004t0030g0063 a0001c0004t0002g0061 a0001c0004t0005g0050 a0001c0004t0030g0063	3	92	0.0326	8	c.271 others(27): Show c.271-78005_271-78004insCACACAGA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27308057	C C	CATACGTT others(1): Show CATACGTTT	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01891.hp1 HG02717.hp2 HG01099.hp1 HG01891.hp1 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0012 a0001c0016 a0001c0001 a0001c0012 a0001c0016	a0001c0001t0028 a0001c0012t0003 a0001c0016t0001 a0001c0001t0028 a0001c0012t0003 a0001c0016t0001	a0001c0001t0028g0054 a0001c0012t0003g0068 a0001c0016t0001g0074 a0001c0001t0028g0054 a0001c0012t0003g0068 a0001c0016t0001g0074	3	92	0.0326	8	c.271 others(27): Show c.271-18749_271-18748insCGTTTATA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27336255	A A	AAAAGAAA others(1): Show AAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02258.hp1 HG02451.hp2 others(14): Show HG01891.hp1 HG02258.hp1 HG02451.hp2 HG02572.hp2 HG02698.hp1 HG02922.hp1 HG02922.hp2 HG03098.hp2 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp2 HG03516.hp2 NA18906.hp1 NA19030.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(6): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0009 a0001c0011 a0001c0014 a0001c0017 a0001c0018	a0001c0001t0001 a0001c0001t0028 a0001c0002t0026 others(9): Show a0001c0001t0001 a0001c0001t0028 a0001c0002t0026 a0001c0004t0005 a0001c0004t0011 a0001c0004t0030 a0001c0006t0003 a0001c0009t0002 a0001c0011t0018 a0001c0014t0024 a0001c0017t0001 a0001c0018t0004	a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0038 others(14): Show a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0038 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0084 a0001c0001t0028g0054 a0001c0002t0026g0070 a0001c0004t0005g0050 a0001c0004t0011g0078 a0001c0004t0030g0063 a0001c0006t0003g0069 a0001c0009t0002g0089 a0001c0011t0018g0004 a0001c0014t0024g0057 a0001c0017t0001g0039 a0001c0018t0004g0053	17	92	0.1848	8	c.574 others(25): Show c.574+7376_574+7383dupAAAGAAAG	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27353426	C C	CTATTTAT others(1): Show CTATTTATT	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp2 HG02258.hp1 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0003 a0001c0001t0001 a0001c0006t0003	a0001c0001t0001g0073 a0001c0006t0003g0020 a0001c0001t0001g0073 a0001c0006t0003g0020	2	92	0.0217	8	c.574 others(27): Show c.574+24564_574+24571dupATTTATTT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27388871	G G	GAGAGAGA others(1): Show GAGAGAGAC	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG06807.hp2 HG02258.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0022 a0001c0001t0001 a0001c0003t0022	a0001c0001t0001g0073 a0001c0003t0022g0058 a0001c0001t0001g0073 a0001c0003t0022g0058	2	92	0.0217	8	c.574 others(27): Show c.574+59999_574+60006dupCAGAGAGA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27430989	C C	CAATAAAT others(1): Show CAATAAATA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01496.hp1 HG02698.hp2 others(1): Show HG01243.hp2 HG01496.hp1 HG02698.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 others(1): Show a0001c0001 a0001c0004 a0001c0006 a0001c0014	a0001c0001t0001 a0001c0004t0002 a0001c0006t0003 others(1): Show a0001c0001t0001 a0001c0004t0002 a0001c0006t0003 a0001c0014t0024	a0001c0001t0001g0035 a0001c0004t0002g0015 a0001c0006t0003g0008 others(1): Show a0001c0001t0001g0035 a0001c0004t0002g0015 a0001c0006t0003g0008 a0001c0014t0024g0057	4	92	0.0435	8	c.575 others(27): Show c.575-49617_575-49610dupAAATAAAT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27436972	G G	GGTGACAA others(1): Show GGTGACAAA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp2 HG01070.hp2 others(20): Show HG00408.hp1 HG00408.hp2 HG01070.hp2 HG01099.hp2 HG01884.hp1 HG01891.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02572.hp2 HG02717.hp2 HG02922.hp1 HG03017.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03492.hp2 NA19030.hp1 NA19240.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0012	a0001c0001t0001 a0001c0001t0012 a0001c0001t0021 others(17): Show a0001c0001t0001 a0001c0001t0012 a0001c0001t0021 a0001c0001t0031 a0001c0001t0034 a0001c0002t0001 a0001c0002t0026 a0001c0002t0035 a0001c0003t0012 a0001c0003t0019 a0001c0004t0005 a0001c0004t0011 a0001c0005t0002 a0001c0005t0005 a0001c0006t0003 a0001c0007t0001 a0001c0007t0036 a0001c0009t0002 a0001c0009t0010 a0001c0012t0003	a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0012g0025 others(20): Show a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0012g0025 a0001c0001t0021g0072 a0001c0001t0031g0028 a0001c0001t0034g0088 a0001c0002t0001g0027 a0001c0002t0001g0047 a0001c0002t0026g0070 a0001c0002t0035g0019 a0001c0003t0012g0023 a0001c0003t0019g0064 a0001c0004t0005g0050 a0001c0004t0011g0078 a0001c0005t0002g0067 a0001c0005t0005g0045 a0001c0006t0003g0020 a0001c0006t0003g0069 a0001c0007t0001g0048 a0001c0007t0036g0016 a0001c0009t0002g0089 a0001c0009t0010g0051 a0001c0012t0003g0068	23	92	0.2500	8	c.575 others(27): Show c.575-43674_575-43673insCAAAGTGA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27436995	T T	TAGAGAGA others(1): Show TAGAGAGAG	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp1 HG02109.hp1 HG01884.hp2 HG01891.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0013 a0001c0001 a0001c0004 a0001c0013	a0001c0001t0028 a0001c0004t0002 a0001c0013t0023 a0001c0001t0028 a0001c0004t0002 a0001c0013t0023	a0001c0001t0028g0054 a0001c0004t0002g0061 a0001c0013t0023g0006 a0001c0001t0028g0054 a0001c0004t0002g0061 a0001c0013t0023g0006	3	92	0.0326	8	c.575 others(27): Show c.575-43624_575-43617dupAGAGAGAG	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRP_chr5_170778725_170819047	170803742	G G	GTGGTTGG others(1): Show GTGGTTGGT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00544.hp2 HG00738.hp1 others(14): Show HG00438.hp1 HG00544.hp2 HG00738.hp1 HG01106.hp1 HG01884.hp1 HG02615.hp2 HG02738.hp2 HG03041.hp1 HG03239.hp2 HG03516.hp2 HG03942.hp1 HG03942.hp2 NA18955.hp2 NA18971.hp2 NA18974.hp1 NA18995.hp1 NA19090.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0002c0004 a0003c0007	a0001c0001t0001 a0001c0001t0012 a0001c0003t0002 others(6): Show a0001c0001t0001 a0001c0001t0012 a0001c0003t0002 a0002c0002t0003 a0002c0002t0005 a0002c0002t0024 a0002c0002t0034 a0002c0004t0024 a0003c0007t0006	a0001c0001t0001g0158 a0001c0001t0001g0162 a0001c0001t0001g0180 others(10): Show a0001c0001t0001g0158 a0001c0001t0001g0162 a0001c0001t0001g0180 a0001c0001t0001g0187 a0001c0001t0012g0049 a0001c0003t0002g0134 a0002c0002t0003g0031 a0002c0002t0005g0014 a0002c0002t0005g0071 a0002c0002t0024g0087 a0002c0002t0034g0086 a0002c0004t0024g0084 a0003c0007t0006g0065	17	362	0.0470	8	c.542 others(25): Show c.542-1932_542-1925dupGGTTGGTT	GABRP	ENSG00000094755.17	transcript	ENST00000265294.9	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr5	TogoVar
GABRQ_chrX_152632895_152662542	152639376	G G	GCGCACAC others(1): Show GCGCACACA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02615.hp2 HG02809.hp1 others(8): Show HG02280.hp2 HG02615.hp2 HG02809.hp1 HG03130.hp1 HG03195.hp2 HG03453.hp1 HG03453.hp2 HG03516.hp1 HG03579.hp1 NA19030.hp1 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0009 a0002c0002 others(1): Show a0001c0001 a0001c0009 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0027 a0001c0009t0001 a0002c0002t0025 a0003c0003t0009	a0001c0001t0001g0028 a0001c0001t0001g0114 a0001c0001t0004g0116 others(6): Show a0001c0001t0001g0028 a0001c0001t0001g0114 a0001c0001t0004g0116 a0001c0001t0004g0118 a0001c0001t0006g0026 a0001c0001t0027g0028 a0001c0009t0001g0115 a0002c0002t0025g0117 a0003c0003t0009g0027	11	298	0.0369	8	c.150 others(24): Show c.150-1000_150-993dupGCACACAC	GABRQ	ENSG00000268089.3	transcript	ENST00000598523.3	protein_coding	1/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GABRQ_chrX_152632895_152662542	152639378	G G	GCACACAC others(1): Show GCACACACA	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02922.hp2 HG02970.hp1 others(3): Show HG02818.hp2 HG02922.hp2 HG02970.hp1 HG03209.hp1 HG06807.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0006 a0001c0001t0004g0006 a0001c0001t0001g0006 a0001c0001t0004g0006	6	298	0.0201	8	c.150 others(23): Show c.150-981_150-974dupCACACACA	GABRQ	ENSG00000268089.3	transcript	ENST00000598523.3	protein_coding	1/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GABRQ_chrX_152632895_152662542	152639378	G G	GCGCACAC others(1): Show GCGCACACA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02622.hp1 HG02970.hp2 others(1): Show HG00735.hp1 HG02622.hp1 HG02970.hp2 NA18971.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0008 a0001c0001 a0002c0002 a0003c0008	a0001c0001t0001 a0002c0002t0002 a0003c0008t0001 a0001c0001t0001 a0002c0002t0002 a0003c0008t0001	a0001c0001t0001g0108 a0001c0001t0001g0125 a0002c0002t0002g0126 others(1): Show a0001c0001t0001g0108 a0001c0001t0001g0125 a0002c0002t0002g0126 a0003c0008t0001g0124	4	298	0.0134	8	c.150 others(23): Show c.150-999_150-998insGCACACAC	GABRQ	ENSG00000268089.3	transcript	ENST00000598523.3	protein_coding	1/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
GABRR1_chr6_89172504_89222358	89196822	G G	GGAAAGAA others(1): Show GGAAAGAAA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp2 HG00642.hp2 others(4): Show HG00558.hp1 HG00558.hp2 HG00642.hp2 HG02056.hp2 HG04228.hp1 NA18965.hp1 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0002 a0001c0002t0001 a0001c0003t0002 a0001c0001t0002 a0001c0002t0001 a0001c0003t0002	a0001c0001t0002g0021 a0001c0001t0002g0023 a0001c0002t0001g0004 others(4): Show a0001c0001t0002g0021 a0001c0001t0002g0023 a0001c0002t0001g0004 a0001c0002t0001g0005 a0001c0002t0001g0015 a0001c0002t0001g0020 a0001c0003t0002g0006	7	25	0.2800	8	c.572 others(25): Show c.572+1190_572+1197dupTTTCTTTC	GABRR1	ENSG00000146276.13	transcript	ENST00000454853.7	protein_coding	5/9			chr6	TogoVar
GABRR2_chr6_89249464_89320299	89280211	A A	AATATATA others(1): Show AATATATAT	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01884.hp1 HG03098.hp2 HG00140.hp2 HG01884.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0017 a0001c0002t0001 a0001c0001t0006 a0001c0001t0017 a0001c0002t0001	a0001c0001t0006g0330 a0001c0001t0017g0016 a0001c0002t0001g0220 a0001c0001t0006g0330 a0001c0001t0017g0016 a0001c0002t0001g0220	3	366	0.0082	8	c.221 others(25): Show c.221-8497_221-8490dupATATATAT	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	2/8			chr6	TogoVar
GABRR2_chr6_89249464_89320299	89280247	T T	TATATATA others(1): Show TATATATAC	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01070.hp1 HG01071.hp1 others(12): Show HG00621.hp2 HG01070.hp1 HG01071.hp1 HG01358.hp1 HG02145.hp2 HG02258.hp2 HG03834.hp1 NA18944.hp1 NA18960.hp2 NA18983.hp1 NA19004.hp2 NA19007.hp2 NA19009.hp2 NA19011.hp2 NA19087.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0004 a0001c0002 a0002c0004	a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 others(2): Show a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 a0001c0002t0012 a0002c0004t0004	a0001c0002t0001g0063 a0001c0002t0001g0069 a0001c0002t0001g0078 others(12): Show a0001c0002t0001g0063 a0001c0002t0001g0069 a0001c0002t0001g0078 a0001c0002t0001g0080 a0001c0002t0001g0111 a0001c0002t0001g0229 a0001c0002t0001g0260 a0001c0002t0001g0269 a0001c0002t0003g0114 a0001c0002t0003g0200 a0001c0002t0005g0126 a0001c0002t0005g0208 a0001c0002t0005g0209 a0001c0002t0012g0079 a0002c0004t0004g0327	15	366	0.0410	8	c.221 others(25): Show c.221-8533_221-8526dupGTATATAT	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	2/8			chr6	TogoVar
GABRR2_chr6_89249464_89320299	89280253	T T	TATATACA others(1): Show TATATACAC	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01168.hp2 HG01346.hp1 others(1): Show HG00280.hp2 HG01168.hp2 HG01346.hp1 HG03017.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 a0002c0003t0002	a0001c0001t0001g0231 a0001c0001t0003g0207 a0001c0001t0010g0130 others(1): Show a0001c0001t0001g0231 a0001c0001t0003g0207 a0001c0001t0010g0130 a0002c0003t0002g0059	4	366	0.0109	8	c.221 others(25): Show c.221-8532_221-8531insGTGTATAT	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	2/8			chr6	TogoVar
GABRR2_chr6_89249464_89320299	89280253	T T	TATATATA others(1): Show TATATATAC	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG03130.hp1 HG03195.hp1 HG02723.hp2 HG03130.hp1 HG03195.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0302 a0002c0003t0004g0313 a0002c0003t0004g0350 a0002c0003t0004g0302 a0002c0003t0004g0313 a0002c0003t0004g0350	3	366	0.0082	8	c.221 others(25): Show c.221-8532_221-8531insGTATATAT	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	2/8			chr6	TogoVar
GABRR2_chr6_89249464_89320299	89292346	T T	TTATATAT others(1): Show TTATATATA	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01257.hp1 HG02602.hp1 HG01255.hp2 HG01257.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0015 a0001c0002t0003 a0001c0002t0006 a0001c0001t0015 a0001c0002t0003 a0001c0002t0006	a0001c0001t0015g0104 a0001c0002t0003g0127 a0001c0002t0006g0071 a0001c0001t0015g0104 a0001c0002t0003g0127 a0001c0002t0006g0071	3	366	0.0082	8	c.220 others(25): Show c.220+7405_220+7412dupTATATATA	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	2/8			chr6	TogoVar
GABRR3_chr3_97980102_98040315	98005210	A A	AACACACA others(1): Show AACACACAC	intron_variant intron_variant	MODIFIER	HG03491.hp1 NA18963.hp1 NA18973.hp1 others(4): Show HG03491.hp1 NA18963.hp1 NA18973.hp1 NA18977.hp2 NA18989.hp2 NA18999.hp2 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0001 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0316 a0001c0001t0001g0344 a0001c0001t0004g0210 others(4): Show a0001c0001t0001g0316 a0001c0001t0001g0344 a0001c0001t0004g0210 a0001c0001t0004g0241 a0001c0001t0004g0314 a0001c0001t0004g0315 a0001c0001t0005g0196	7	382	0.0183	8	c.754 others(25): Show c.754+2546_754+2553dupGTGTGTGT	GABRR3	ENSG00000183185.10	transcript	ENST00000472788.6	protein_coding	7/9			chr3	TogoVar
GAD1_chr2_170811887_170866151	170819291	G G	GAAATAAA others(1): Show GAAATAAAT	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01261.hp2 HG03209.hp2 others(4): Show HG00733.hp2 HG01261.hp2 HG03209.hp2 NA18989.hp2 NA19000.hp2 NA19240.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0003 a0001c0001 a0001c0004 a0002c0003	a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 a0002c0003t0001	a0001c0001t0001g0241 a0001c0001t0003g0282 a0001c0001t0003g0283 others(4): Show a0001c0001t0001g0241 a0001c0001t0003g0282 a0001c0001t0003g0283 a0001c0004t0001g0239 a0001c0004t0001g0240 a0001c0004t0001g0281 a0002c0003t0001g0344	7	412	0.0170	8	c.82+ others(21): Show c.82+636_82+643dupAATAAATA	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	2/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAD1_chr2_170811887_170866151	170824378	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03579.hp1 HG03942.hp2 others(1): Show HG03195.hp1 HG03579.hp1 HG03942.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0253 a0001c0001t0002g0079 a0001c0001t0004g0173 others(1): Show a0001c0001t0001g0253 a0001c0001t0002g0079 a0001c0001t0004g0173 a0001c0001t0004g0284	4	412	0.0097	8	c.145 others(25): Show c.145+2264_145+2271dupACACACAC	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAD1_chr2_170811887_170866151	170824929	C C	CGTGTGTG others(1): Show CGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00408.hp1 HG00423.hp2 others(71): Show HG00280.hp2 HG00408.hp1 HG00423.hp2 HG00544.hp2 HG00621.hp1 HG00741.hp1 HG01070.hp1 HG01081.hp2 HG01106.hp2 HG01256.hp2 HG01361.hp1 HG01884.hp1 HG01928.hp1 HG01943.hp1 HG01981.hp2 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02148.hp1 HG02155.hp1 HG02165.hp2 HG02486.hp1 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02965.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp2 HG03239.hp2 HG03471.hp2 HG03491.hp2 HG03492.hp1 HG03654.hp2 HG03669.hp2 HG03831.hp1 HG03834.hp2 HG03942.hp2 HG04184.hp1 NA18941.hp2 NA18942.hp1 NA18946.hp2 NA18947.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18955.hp1 NA18959.hp2 NA18961.hp2 NA18966.hp1 NA18975.hp2 NA18980.hp2 NA18982.hp2 NA18984.hp2 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18999.hp1 NA19010.hp2 NA19054.hp1 NA19056.hp2 NA19066.hp1 NA19072.hp1 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19090.hp2 NA20805.hp2 NA20905.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0001c0013 others(2): Show a0001c0001 a0001c0004 a0001c0013 a0002c0003 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0004t0001 a0001c0013t0001 a0002c0003t0013 a0003c0006t0002	a0001c0001t0001g0038 a0001c0001t0001g0063 a0001c0001t0001g0089 others(69): Show a0001c0001t0001g0038 a0001c0001t0001g0063 a0001c0001t0001g0089 a0001c0001t0001g0127 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0178 a0001c0001t0001g0182 a0001c0001t0001g0219 a0001c0001t0001g0222 a0001c0001t0001g0225 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0002g0005 a0001c0001t0002g0024 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0079 a0001c0001t0002g0081 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0120 a0001c0001t0002g0123 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0133 a0001c0001t0002g0135 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0224 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0262 a0001c0001t0002g0265 a0001c0001t0002g0338 a0001c0001t0002g0339 a0001c0001t0002g0340 a0001c0001t0002g0341 a0001c0001t0002g0342 a0001c0001t0003g0299 a0001c0001t0006g0256 a0001c0001t0006g0257 a0001c0001t0006g0258 a0001c0001t0006g0329 a0001c0001t0006g0349 a0001c0001t0007g0020 a0001c0001t0010g0384 a0001c0004t0001g0118 a0001c0013t0001g0117 a0002c0003t0013g0217 a0003c0006t0002g0078 a0003c0006t0002g0082 a0003c0006t0002g0083 a0003c0006t0002g0124 a0003c0006t0002g0177	74	412	0.1796	8	c.145 others(25): Show c.145+2795_145+2802dupGTGTGTGT	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	3/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAD1_chr2_170811887_170866151	170831594	A A	ATGTGTGT others(1): Show ATGTGTGTG	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00423.hp2 others(12): Show HG00280.hp2 HG00323.hp2 HG00423.hp2 HG00733.hp1 HG00741.hp1 HG01106.hp2 HG01109.hp2 HG01168.hp2 HG01981.hp2 HG02965.hp2 HG03491.hp1 NA18948.hp1 NA18994.hp1 NA19060.hp2 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 others(1): Show a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002	a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0061 others(12): Show a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0061 a0001c0001t0002g0081 a0001c0001t0002g0093 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0133 a0001c0001t0002g0317 a0001c0001t0002g0342 a0001c0001t0008g0316 a0001c0001t0008g0379 a0001c0002t0001g0046 a0001c0002t0001g0101 a0001c0002t0002g0098	15	412	0.0364	8	c.547 others(23): Show c.547+436_547+443dupGTGTGTGT	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAD1_chr2_170811887_170866151	170832660	G G	GCACACAC others(1): Show GCACACACA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00609.hp2 HG02027.hp1 others(6): Show HG00544.hp2 HG00609.hp2 HG02027.hp1 HG02135.hp1 NA18612.hp1 NA18949.hp1 NA18964.hp2 NA18972.hp2 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0178 a0001c0001t0001g0222 a0001c0001t0003g0330 others(6): Show a0001c0001t0001g0178 a0001c0001t0001g0222 a0001c0001t0003g0330 a0001c0002t0001g0031 a0001c0002t0001g0034 a0001c0002t0001g0044 a0001c0002t0001g0100 a0001c0002t0002g0036 a0001c0002t0002g0051	9	412	0.0218	8	c.547 others(25): Show c.547+1469_547+1470insACACACAC	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAD1_chr2_170811887_170866151	170832662	G G	GCACACAC others(1): Show GCACACACA	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG02074.hp1 HG02647.hp2 others(3): Show HG01943.hp2 HG02074.hp1 HG02647.hp2 HG03540.hp1 NA18990.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0003g0304 a0001c0001t0003g0309 a0001c0002t0001g0028 others(3): Show a0001c0001t0003g0304 a0001c0001t0003g0309 a0001c0002t0001g0028 a0001c0002t0001g0069 a0001c0002t0001g0101 a0001c0002t0001g0102	6	412	0.0146	8	c.547 others(25): Show c.547+1471_547+1472insACACACAC	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding	5/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
GAD2_chr10_26211774_26309558	26218535	G G	GCTCTCTC others(1): Show GCTCTCTCT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02622.hp1 HG02809.hp1 others(6): Show HG02559.hp1 HG02622.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02896.hp1 HG03453.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 others(1): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0011 a0001c0001t0016	a0001c0001t0002g0275 a0001c0001t0002g0276 a0001c0001t0002g0277 others(6): Show a0001c0001t0002g0275 a0001c0001t0002g0276 a0001c0001t0002g0277 a0001c0001t0005g0278 a0001c0001t0011g0110 a0001c0001t0011g0111 a0001c0001t0011g0112 a0001c0001t0016g0274 a0001c0001t0016g0279	9	294	0.0306	8	c.287 others(23): Show c.287-498_287-491dupTCTCTCTC	GAD2	ENSG00000136750.13	transcript	ENST00000376261.8	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GAD2_chr10_26211774_26309558	26218551	T T	TCTCACAC others(1): Show TCTCACACA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01517.hp1 HG03195.hp1 others(5): Show HG01243.hp1 HG01517.hp1 HG03195.hp1 NA18979.hp2 NA18995.hp2 NA19058.hp2 NA19065.hp2 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0019 a0001c0001t0022	a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 others(5): Show a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0003g0221 a0001c0001t0005g0243 a0001c0001t0019g0107 a0001c0001t0022g0220	8	294	0.0272	8	c.287 others(23): Show c.287-491_287-490insTCACACAC	GAD2	ENSG00000136750.13	transcript	ENST00000376261.8	protein_coding	3/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GAD2_chr10_26211774_26309558	26241969	A A	ATTTGTTT others(1): Show ATTTGTTTG	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01243.hp2 HG02622.hp2 others(8): Show HG00642.hp2 HG01243.hp2 HG02622.hp2 HG02630.hp2 HG02895.hp1 HG02965.hp2 HG03098.hp1 HG03516.hp2 NA18906.hp2 NA19043.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0007 a0001c0001t0009 a0001c0001t0015 others(1): Show a0001c0001t0007 a0001c0001t0009 a0001c0001t0015 a0001c0003t0015	a0001c0001t0007g0104 a0001c0001t0007g0252 a0001c0001t0007g0253 others(8): Show a0001c0001t0007g0104 a0001c0001t0007g0252 a0001c0001t0007g0253 a0001c0001t0007g0254 a0001c0001t0007g0255 a0001c0001t0007g0256 a0001c0001t0007g0257 a0001c0001t0007g0258 a0001c0001t0009g0100 a0001c0001t0015g0101 a0001c0003t0015g0267	11	294	0.0374	8	c.841 others(25): Show c.841-3932_841-3925dupGTTTGTTT	GAD2	ENSG00000136750.13	transcript	ENST00000376261.8	protein_coding	7/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GAD2_chr10_26211774_26309558	26295508	G G	GCACACAC others(1): Show GCACACACA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02027.hp2 HG02040.hp2 others(4): Show HG01243.hp2 HG02027.hp2 HG02040.hp2 HG03486.hp2 NA18906.hp1 NA19076.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0015 a0001c0001t0028 others(1): Show a0001c0001t0001 a0001c0001t0015 a0001c0001t0028 a0001c0003t0015	a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0061 others(4): Show a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0061 a0001c0001t0001g0080 a0001c0001t0015g0101 a0001c0001t0028g0280 a0001c0003t0015g0267	7	294	0.0238	8	c.158 others(27): Show c.1584+2550_1584+2557dupCACACACA	GAD2	ENSG00000136750.13	transcript	ENST00000376261.8	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr10	TogoVar
GAD2_chr10_26211774_26309558	26303480	G G	GAGGAAGG others(1): Show GAGGAAGGA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00323.hp2 HG00544.hp2 HG00639.hp2 others(17): Show HG00323.hp2 HG00544.hp2 HG00639.hp2 HG01168.hp1 HG01169.hp2 HG01255.hp2 HG02004.hp1 HG02080.hp1 HG02083.hp1 HG02155.hp1 HG02165.hp2 HG02451.hp2 HG03471.hp1 HG03831.hp1 NA18960.hp2 NA18965.hp1 NA18988.hp1 NA19074.hp1 NA19087.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0006 a0001c0001 a0001c0002 a0004c0006	a0001c0001t0014 a0001c0002t0004 a0001c0002t0030 others(1): Show a0001c0001t0014 a0001c0002t0004 a0001c0002t0030 a0004c0006t0029	a0001c0001t0014g0059 a0001c0001t0014g0105 a0001c0002t0004g0007 others(15): Show a0001c0001t0014g0059 a0001c0001t0014g0105 a0001c0002t0004g0007 a0001c0002t0004g0008 a0001c0002t0004g0031 a0001c0002t0004g0115 a0001c0002t0004g0116 a0001c0002t0004g0118 a0001c0002t0004g0119 a0001c0002t0004g0120 a0001c0002t0004g0235 a0001c0002t0004g0236 a0001c0002t0004g0237 a0001c0002t0004g0239 a0001c0002t0004g0240 a0001c0002t0004g0241 a0001c0002t0030g0114 a0004c0006t0029g0117	20	294	0.0680	8	c.25 others(19): Show c.2521_*2528dupGGAAGGAA	GAD2	ENSG00000136750.13	transcript	ENST00000376261.8	protein_coding	16/16	2529	INFO_REALIGN_3_PRIME	chr10	TogoVar
GADD45A_chr1_67680201_67693334	67682506	A A	AATATATA others(1): Show AATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp2 HG02257.hp1 HG02451.hp1 others(5): Show HG01074.hp2 HG02257.hp1 HG02451.hp1 HG02622.hp2 HG03041.hp2 HG03139.hp1 HG03516.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0001 a0001c0001t0001g0005	8	404	0.0198	8	c.-29 others(19): Show c.-2989_-2988insATATATAT	GADD45A	ENSG00000116717.13	transcript	ENST00000370986.9	protein_coding		2694		chr1	TogoVar
GADD45B_chr19_2471127_2483257	2473997	T T	TTTTGTTT others(1): Show TTTTGTTTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp2 HG00621.hp2 HG00639.hp1 others(30): Show HG00609.hp2 HG00621.hp2 HG00639.hp1 HG01074.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp1 HG01192.hp1 HG01261.hp1 HG01358.hp1 HG01496.hp1 HG02129.hp1 HG02145.hp1 HG02148.hp1 HG02451.hp1 HG02683.hp1 HG03669.hp1 HG03834.hp1 HG03927.hp2 HG04115.hp1 HG04199.hp2 NA18747.hp1 NA18943.hp2 NA18959.hp2 NA18978.hp1 NA18992.hp1 NA18995.hp1 NA19005.hp2 NA19012.hp1 NA19063.hp2 NA19085.hp2 NA20300.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0001 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0003g0001 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0003g0001 a0001c0001t0004g0001	33	460	0.0717	8	c.-23 others(19): Show c.-2362_-2361insTTTGTTTG	GADD45B	ENSG00000099860.9	transcript	ENST00000215631.9	protein_coding		2129		chr19	TogoVar
GADD45GIP1_chr19_12948119_12962223	12961691	A A	ATTTTTTT others(1): Show ATTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp2 HG01261.hp2 HG01928.hp2 others(15): Show HG01175.hp2 HG01261.hp2 HG01928.hp2 HG01943.hp1 HG01993.hp1 HG02630.hp1 HG02683.hp1 HG02970.hp2 HG03471.hp1 HG03688.hp2 HG03831.hp2 HG03834.hp2 NA18950.hp1 NA18993.hp2 NA19002.hp1 NA19030.hp1 NA20300.hp2 NA20905.hp1	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0002 a0006c0005 a0001c0001 a0002c0002 a0006c0005	a0001c0001t0001 a0001c0001t0012 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0012 a0002c0002t0001 a0006c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0044 a0001c0001t0001g0047 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0012g0036 a0002c0002t0001g0013 a0006c0005t0001g0050	18	372	0.0484	8	c.-44 others(19): Show c.-4480_-4479insAAAAAAAA	GADD45GIP1	ENSG00000179271.3	transcript	ENST00000316939.3	protein_coding		4469		chr19	TogoVar
GADD45GIP1_chr19_12948119_12962223	12962192	A A	ATTTCTTT others(1): Show ATTTCTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG01099.hp1 HG01175.hp1 others(16): Show HG00323.hp1 HG01099.hp1 HG01175.hp1 HG01346.hp2 HG01943.hp1 HG01993.hp2 HG02683.hp1 HG03195.hp2 HG03453.hp1 HG03704.hp1 HG04115.hp2 HG04228.hp2 NA18522.hp1 NA18960.hp1 NA19009.hp2 NA19070.hp2 NA19077.hp2 NA19079.hp2 NA21309.hp1	a0001 a0011 a0001 a0011	a0001c0001 a0001c0013 a0011c0009 a0001c0001 a0001c0013 a0011c0009	a0001c0001t0001 a0001c0013t0001 a0011c0009t0001 a0001c0001t0001 a0001c0013t0001 a0011c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0012 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0046 a0001c0013t0001g0031 a0011c0009t0001g0021	19	372	0.0511	8	c.-49 others(19): Show c.-4981_-4980insGAAAGAAA	GADD45GIP1	ENSG00000179271.3	transcript	ENST00000316939.3	protein_coding		4970		chr19	TogoVar
GADL1_chr3_30721197_30899661	30726484	A A	AACACACA others(1): Show AACACACAC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01346.hp1 HG03098.hp1 HG03471.hp1 HG01346.hp1 HG03098.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0025 a0001c0001t0026 a0001c0008t0029 a0001c0001t0025 a0001c0001t0026 a0001c0008t0029	a0001c0001t0025g0187 a0001c0001t0026g0245 a0001c0008t0029g0059 a0001c0001t0025g0187 a0001c0001t0026g0245 a0001c0008t0029g0059	3	282	0.0106	8	c.17 others(19): Show c.1750_*1757dupGTGTGTGT	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	15/15	1757		chr3	TogoVar
GADL1_chr3_30721197_30899661	30733586	C C	CTCCTTCC others(1): Show CTCCTTCCT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01192.hp1 HG01934.hp2 others(21): Show HG00639.hp2 HG01192.hp1 HG01934.hp2 HG02040.hp1 HG02071.hp2 HG02080.hp2 HG02280.hp2 HG02717.hp2 HG02886.hp1 HG02922.hp1 HG03209.hp1 HG03486.hp1 HG03516.hp1 HG03540.hp2 NA18950.hp2 NA18951.hp1 NA18956.hp2 NA18982.hp2 NA18992.hp2 NA19002.hp1 NA19077.hp2 NA19084.hp2 NA19085.hp1 NA20129.hp2	a0001 a0004 a0008 others(1): Show a0001 a0004 a0008 a0011	a0001c0001 a0004c0003 a0008c0011 others(1): Show a0001c0001 a0004c0003 a0008c0011 a0011c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0010 a0001c0001t0017 a0001c0001t0032 a0001c0001t0033 a0004c0003t0005 a0008c0011t0003 a0011c0013t0014	a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0062 others(21): Show a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0090 a0001c0001t0001g0121 a0001c0001t0001g0196 a0001c0001t0001g0259 a0001c0001t0003g0067 a0001c0001t0003g0172 a0001c0001t0005g0188 a0001c0001t0005g0197 a0001c0001t0005g0222 a0001c0001t0005g0226 a0001c0001t0008g0223 a0001c0001t0008g0224 a0001c0001t0010g0148 a0001c0001t0017g0001 a0001c0001t0032g0109 a0001c0001t0033g0065 a0004c0003t0005g0118 a0008c0011t0003g0269 a0011c0013t0014g0013	24	282	0.0851	8	c.139 others(27): Show c.1393-5179_1393-5172dupAGGAAGGA	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	14/14			chr3	TogoVar
GADL1_chr3_30721197_30899661	30871042	A A	AGTGTGTG others(1): Show AGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG01071.hp2 HG01346.hp1 others(22): Show HG00673.hp2 HG01071.hp2 HG01346.hp1 HG01361.hp2 HG02083.hp2 HG02132.hp2 HG02965.hp1 HG03490.hp1 HG03492.hp1 HG03540.hp1 HG03834.hp1 HG03834.hp2 NA18522.hp1 NA18951.hp2 NA18957.hp1 NA18962.hp2 NA18970.hp2 NA18995.hp1 NA18995.hp2 NA19000.hp1 NA19030.hp1 NA19084.hp2 NA19240.hp2 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0015 a0001c0001t0016 a0001c0001t0026 a0001c0001t0034	a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0044 others(22): Show a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0044 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0092 a0001c0001t0001g0261 a0001c0001t0001g0263 a0001c0001t0002g0041 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0003g0036 a0001c0001t0003g0103 a0001c0001t0003g0241 a0001c0001t0003g0262 a0001c0001t0003g0271 a0001c0001t0004g0011 a0001c0001t0007g0077 a0001c0001t0007g0102 a0001c0001t0008g0101 a0001c0001t0015g0040 a0001c0001t0016g0279 a0001c0001t0016g0280 a0001c0001t0026g0245 a0001c0001t0034g0213	25	282	0.0887	8	c.38- others(23): Show c.38-9285_38-9278dupACACACAC	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	1/14			chr3	TogoVar
GADL1_chr3_30721197_30899661	30889084	T T	TAAAAAAA others(1): Show TAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01934.hp1 NA18950.hp2 others(4): Show HG00642.hp2 HG01934.hp1 NA18950.hp2 NA18970.hp1 NA18994.hp2 NA19000.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0037	a0001c0001t0001g0028 a0001c0001t0001g0057 a0001c0001t0001g0058 others(4): Show a0001c0001t0001g0028 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0076 a0001c0001t0002g0022 a0001c0001t0007g0077 a0001c0001t0037g0021	7	282	0.0248	8	c.37+ others(23): Show c.37+5486_37+5493dupTTTTTTTT	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	1/14			chr3	TogoVar
GAGE10_chrX_49298646_49324841	49305583	G G	GTGTGTGC others(1): Show GTGTGTGCA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02622.hp1 HG02965.hp1 others(7): Show HG01081.hp1 HG02622.hp1 HG02965.hp1 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03471.hp1 HG06807.hp1 NA19043.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0031 others(2): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0031 a0001c0001t0001g0081 a0001c0001t0001g0082	10	302	0.0331	8	c.202 others(21): Show c.202+65_202+66insCATGTGTG	GAGE10	ENSG00000215274.6	transcript	ENST00000407599.4	protein_coding	3/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
GAGE12D_chrX_49536733_49554094	49543625	C C	CGTGTGTG others(1): Show CGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02922.hp1 NA19240.hp1 HG02922.hp1 NA19240.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0005 a0002c0002 a0005c0005	a0002c0002t0001 a0005c0005t0003 a0002c0002t0001 a0005c0005t0003	a0002c0002t0001g0050 a0005c0005t0003g0017 a0002c0002t0001g0050 a0005c0005t0003g0017	2	72	0.0278	8	c.205 others(21): Show c.205+73_205+80dupGTGTGTGT	GAGE12D	ENSG00000227488.3	transcript	ENST00000405679.4	protein_coding	3/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
GAGE12E_chrX_49546289_49563645	49553181	C C	CGTGTGTG others(1): Show CGTGTGTGT	intron_variant intron_variant	MODIFIER	HG00639.hp2 NA19240.hp1 HG00639.hp2 NA19240.hp1	a0006 a0012 a0006 a0012	a0006c0005 a0012c0012 a0006c0005 a0012c0012	a0006c0005t0002 a0012c0012t0001 a0006c0005t0002 a0012c0012t0001	a0006c0005t0002g0025 a0012c0012t0001g0013 a0006c0005t0002g0025 a0012c0012t0001g0013	2	100	0.0200	8	c.205 others(21): Show c.205+73_205+80dupGTGTGTGT	GAGE12E	ENSG00000216649.5	transcript	ENST00000381698.5	protein_coding	3/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
GAGE12E_chrX_49546289_49563645	49562725	G G	GTGTGTGC others(1): Show GTGTGTGCA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19054.hp2 NA19054.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0005 a0005c0006t0005	a0005c0006t0005g0020 a0005c0006t0005g0020	1	100	0.0100	8	c.41 others(19): Show c.4170_*4171insTGTGTGCA	GAGE12E	ENSG00000216649.5	transcript	ENST00000381698.5	protein_coding		4081		chrX	TogoVar
GAGE12E_chrX_49546289_49563645	49562726	T T	TGTGTGCA others(1): Show TGTGTGCAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0084 a0001c0001t0002g0084	1	100	0.0100	8	c.41 others(19): Show c.4171_*4172insGTGTGCAC	GAGE12E	ENSG00000216649.5	transcript	ENST00000381698.5	protein_coding		4082		chrX	TogoVar
GAGE12F_chrX_49555842_49573205	49562725	G G	GTGTGTGC others(1): Show GTGTGTGCA	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02615.hp1 HG03195.hp1 others(1): Show HG00544.hp2 HG02615.hp1 HG03195.hp1 NA18978.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0003c0003t0004 a0003c0003t0005 a0001c0001t0002 a0003c0003t0004 a0003c0003t0005	a0001c0001t0002g0009 a0003c0003t0004g0020 a0003c0003t0005g0019 others(1): Show a0001c0001t0002g0009 a0003c0003t0004g0020 a0003c0003t0005g0019 a0003c0003t0005g0021	4	99	0.0404	8	c.205 others(21): Show c.205+65_205+66insCATGTGTG	GAGE12F	ENSG00000236362.9	transcript	ENST00000440137.2	protein_coding	3/4		INFO_REALIGN_3_PRIME	chrX	TogoVar
GAGE12F_chrX_49555842_49573205	49562726	T T	TGTGTGCA others(1): Show TGTGTGCAC	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	99	0.0101	8	c.205 others(21): Show c.205+65_205+66insCACGTGTG	GAGE12F	ENSG00000236362.9	transcript	ENST00000440137.2	protein_coding	3/4		INFO_REALIGN_3_PRIME	chrX	TogoVar

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