Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
IL1RAPL1_chrX_28582446_29961718	29686534	G G	GATTTATT others(1): Show GATTTATTT	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0114 a0001c0001t0006g0114	1	135	0.0074	8	c.778 others(27): Show c.778+18064_778+18071dupTTTATTTA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29695597	C C	CGAGAGAG others(1): Show CGAGAGAGA	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0081 a0001c0001t0004g0081	1	135	0.0074	8	c.778 others(27): Show c.778+27116_778+27123dupGAGAGAGA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29711043	G G	GGTGTGTG others(1): Show GGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0120 a0001c0001t0001g0120	1	135	0.0074	8	c.778 others(27): Show c.778+42556_778+42563dupGTGTGTGT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29711061	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02895.hp1 HG03139.hp1 others(3): Show HG02886.hp1 HG02895.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0002t0004	a0001c0001t0001g0058 a0001c0001t0001g0068 a0001c0001t0001g0108 others(3): Show a0001c0001t0001g0058 a0001c0001t0001g0068 a0001c0001t0001g0108 a0001c0001t0003g0030 a0001c0001t0004g0127 a0001c0002t0004g0082	6	135	0.0444	8	c.778 others(27): Show c.778+42557_778+42558insACACACAC	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10		chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29711067	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	135	0.0074	8	c.778 others(27): Show c.778+42564_778+42565insCACACACA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29711069	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0126 a0001c0001t0004g0126	1	135	0.0074	8	c.778 others(27): Show c.778+42579_778+42586dupCACACACA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29717203	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00642.hp1 HG01192.hp1 others(25): Show HG00408.hp2 HG00642.hp1 HG01192.hp1 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02083.hp1 HG02132.hp1 HG02280.hp1 HG02735.hp1 HG03017.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18944.hp1 NA18953.hp1 NA18965.hp1 NA18966.hp1 NA18970.hp1 NA18977.hp1 NA18988.hp1 NA18995.hp1 NA19000.hp1 NA19004.hp1 NA19082.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0001t0014 a0001c0001t0017	a0001c0001t0001g0064 a0001c0001t0001g0076 a0001c0001t0001g0092 others(25): Show a0001c0001t0001g0064 a0001c0001t0001g0076 a0001c0001t0001g0092 a0001c0001t0001g0111 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0015 a0001c0001t0002g0022 a0001c0001t0002g0027 a0001c0001t0002g0035 a0001c0001t0002g0054 a0001c0001t0003g0008 a0001c0001t0003g0013 a0001c0001t0003g0023 a0001c0001t0003g0029 a0001c0001t0003g0031 a0001c0001t0003g0043 a0001c0001t0004g0069 a0001c0001t0005g0074 a0001c0001t0005g0125 a0001c0001t0006g0098 a0001c0001t0006g0114 a0001c0001t0012g0040 a0001c0001t0014g0097 a0001c0001t0017g0014	28	135	0.2074	8	c.778 others(27): Show c.778+48726_778+48733dupACACACAC	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29718603	T T	TAAAAAAA others(1): Show TAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	135	0.0074	8	c.778 others(27): Show c.778+50111_778+50118dupAAAAAAAA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29769427	G G	GTTTTTTT others(1): Show GTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02071.hp1 NA18994.hp1 NA20300.hp2 HG02071.hp1 NA18994.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0100 a0001c0001t0001g0113 a0001c0001t0001g0087 a0001c0001t0001g0100 a0001c0001t0001g0113	3	135	0.0222	8	c.778 others(29): Show c.778+100950_778+100957dupTTTTTTTT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29782096	G G	GTCTATCT others(1): Show GTCTATCTA	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02145.hp1 HG02280.hp2 others(16): Show HG01255.hp1 HG02145.hp1 HG02280.hp2 HG03017.hp1 HG03225.hp1 HG03654.hp1 HG04199.hp1 HG04204.hp1 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18948.hp1 NA18952.hp1 NA18959.hp1 NA18965.hp1 NA18990.hp1 NA19007.hp1 NA19056.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0014	a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0072 others(16): Show a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0072 a0001c0001t0001g0078 a0001c0001t0001g0093 a0001c0001t0001g0101 a0001c0001t0001g0112 a0001c0001t0001g0119 a0001c0001t0001g0122 a0001c0001t0002g0052 a0001c0001t0003g0013 a0001c0001t0003g0023 a0001c0001t0004g0069 a0001c0001t0004g0081 a0001c0001t0004g0124 a0001c0001t0006g0102 a0001c0001t0006g0123 a0001c0001t0008g0059 a0001c0001t0014g0097	19	135	0.1407	8	c.778 others(29): Show c.778+113595_778+113596insATCTATCT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29782100	G G	GTCTATCT others(1): Show GTCTATCTA	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02886.hp2 NA18945.hp1 others(3): Show HG01261.hp1 HG02886.hp2 NA18945.hp1 NA18983.hp1 NA18986.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006	a0001c0001t0001g0003 a0001c0001t0001g0077 a0001c0001t0001g0084 others(3): Show a0001c0001t0001g0003 a0001c0001t0001g0077 a0001c0001t0001g0084 a0001c0001t0002g0055 a0001c0001t0005g0056 a0001c0001t0006g0114	6	135	0.0444	8	c.778 others(29): Show c.778+113634_778+113641dupCTATCTAT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29782921	T T	TTTTTTTT others(1): Show TTTTTTTTC	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0051 a0001c0001t0011g0051	1	135	0.0074	8	c.778 others(29): Show c.778+114418_778+114419insTTTTTTCT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29800495	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0030 a0001c0001t0003g0030	1	135	0.0074	8	c.779 others(29): Show c.779-116955_779-116948dupCACACACA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29801045	C C	CAAAAAAA others(1): Show CAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00408.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	135	0.0074	8	c.779 others(29): Show c.779-116391_779-116384dupAAAAAAAA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29802747	T T	TTATATAT others(1): Show TTATATATA	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0104	1	135	0.0074	8	c.779 others(29): Show c.779-114689_779-114682dupATATATAT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29802820	T T	TACGTGTA others(1): Show TACGTGTAC	intron_variant intron_variant	MODIFIER	HG03098.hp1 NA18906.hp1 HG03098.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0119 a0001c0001t0002g0016 a0001c0001t0001g0119 a0001c0001t0002g0016	2	135	0.0148	8	c.779 others(29): Show c.779-114643_779-114642insCGTGTACA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29803399	A A	ATATATGT others(1): Show ATATATGTG	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0037 a0001c0001t0003g0037	1	135	0.0074	8	c.779 others(29): Show c.779-114043_779-114036dupGTGTATAT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29829155	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	135	0.0074	8	c.779 others(27): Show c.779-88259_779-88252dupCACACACA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29837258	C C	CAAAAAAA others(1): Show CAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	135	0.0074	8	c.779 others(27): Show c.779-80198_779-80191dupAAAAAAAA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29846798	A A	ATATATAT others(1): Show ATATATATG	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02965.hp1 HG03195.hp2 others(1): Show HG02622.hp1 HG02965.hp1 HG03195.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0013 a0001c0001t0001 a0001c0001t0003 a0001c0001t0013	a0001c0001t0001g0061 a0001c0001t0001g0080 a0001c0001t0003g0030 others(1): Show a0001c0001t0001g0061 a0001c0001t0001g0080 a0001c0001t0003g0030 a0001c0001t0013g0062	4	135	0.0296	8	c.779 others(27): Show c.779-70662_779-70661insTATGTATA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29925412	G G	GTTTTTTT others(1): Show GTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03942.hp1 HG03130.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0019 a0001c0001t0004g0073 a0001c0001t0002g0019 a0001c0001t0004g0073	2	135	0.0148	8	c.105 others(27): Show c.1057+5344_1057+5351dupTTTTTTTT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	8/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29954235	C C	CAAAAAAA others(1): Show CAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03471.hp1 NA19009.hp1 HG03471.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0106 a0001c0001t0001g0067 a0001c0001t0001g0106	2	135	0.0148	8	c.120 others(25): Show c.1202-266_1202-259dupAAAAAAAA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	9/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104582578	T T	TTTTCTTT others(1): Show TTTTCTTTC	intron_variant intron_variant	MODIFIER	NA19082.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	141	0.0071	8	c.-20 others(27): Show c.-20+15539_-20+15546dupCTTTCTTT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104582596	T T	TTCTTTTT others(1): Show TTCTTTTTC	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01069.hp1 NA18970.hp1 others(2): Show HG00280.hp1 HG01069.hp1 NA18970.hp1 NA19058.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 others(2): Show a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037	5	141	0.0355	8	c.-20 others(27): Show c.-20+15546_-20+15547insCTTTTTCT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104582596	T T	TTTTCTTT others(1): Show TTTTCTTTC	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0051 a0001c0002t0001g0051	1	141	0.0071	8	c.-20 others(27): Show c.-20+15583_-20+15590dupTTCTTTCT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104582822	C C	CTCTTTCT others(1): Show CTCTTTCTT	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01255.hp1 HG02027.hp1 others(5): Show HG01109.hp1 HG01255.hp1 HG02027.hp1 HG02129.hp1 HG02818.hp2 HG03471.hp1 NA18943.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0020 others(5): Show a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0052 a0001c0001t0001g0065 a0001c0002t0001g0049	8	141	0.0567	8	c.-20 others(27): Show c.-20+15813_-20+15820dupCTTTCTTT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104582822	C C	CTTTCTCT others(1): Show CTTTCTCTT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02738.hp1 NA18952.hp1 others(2): Show HG01884.hp1 HG02738.hp1 NA18952.hp1 NA18984.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0107 others(2): Show a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0110	5	141	0.0355	8	c.-20 others(27): Show c.-20+15772_-20+15773insTTCTCTTT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104592145	A A	ATGTGTGT others(1): Show ATGTGTGTG	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00673.hp1 HG01106.hp1 others(8): Show HG00642.hp1 HG00673.hp1 HG01106.hp1 HG01943.hp1 HG02027.hp1 HG02071.hp1 NA18940.hp1 NA19000.hp1 NA19062.hp1 NA19070.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0010 a0001c0001t0001g0023 a0001c0001t0001g0024 others(8): Show a0001c0001t0001g0010 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0002t0001g0017 a0001c0002t0001g0025 a0001c0002t0001g0028	11	141	0.0780	8	c.-20 others(27): Show c.-20+25136_-20+25143dupGTGTGTGT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104626299	C C	CGTGTGTG others(1): Show CGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02572.hp1 HG03139.hp1 others(2): Show HG01884.hp1 HG02572.hp1 HG03139.hp1 HG06807.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 others(2): Show a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0002t0001g0019	5	141	0.0355	8	c.-19 others(27): Show c.-19-32590_-19-32583dupTGTGTGTG	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	1/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104766368	G G	GGCCTGCC others(1): Show GGCCTGCCT	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0105 a0001c0001t0001g0105	1	141	0.0071	8	c.82+ others(27): Show c.82+107406_82+107413dupGCCTGCCT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104786919	T T	TTCTCTCT others(1): Show TTCTCTCTC	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0130 a0001c0001t0002g0130	1	141	0.0071	8	c.82+ others(27): Show c.82+127981_82+127988dupTCTCTCTC	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104844528	G G	GACCACAT others(1): Show GACCACATT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02258.hp1 HG02559.hp1 others(1): Show HG02055.hp1 HG02258.hp1 HG02559.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0126 others(1): Show a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127	4	141	0.0284	8	c.82+ others(27): Show c.82+185534_82+185541dupACCACATT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104874279	C C	CCTCTCTC others(1): Show CCTCTCTCT	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02040.hp1 HG02055.hp1 others(14): Show HG01074.hp1 HG02040.hp1 HG02055.hp1 HG02559.hp1 HG03098.hp1 HG03579.hp1 HG03654.hp1 HG06807.hp2 NA18952.hp1 NA18959.hp1 NA18961.hp1 NA18982.hp1 NA18986.hp1 NA19012.hp1 NA19088.hp1 NA19091.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0068 a0001c0001t0001g0076 a0001c0001t0001g0083 others(14): Show a0001c0001t0001g0068 a0001c0001t0001g0076 a0001c0001t0001g0083 a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0096 a0001c0001t0001g0100 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0117 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0141 a0001c0001t0002g0137 a0001c0001t0002g0139 a0001c0002t0001g0106	17	141	0.1206	8	c.82+ others(27): Show c.82+215315_82+215322dupCTCTCTCT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104931947	A A	AGTGTGTG others(1): Show AGTGTGTGT	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01952.hp1 HG02040.hp1 others(7): Show HG01934.hp1 HG01952.hp1 HG02040.hp1 HG02056.hp1 HG02083.hp1 NA18945.hp1 NA18986.hp1 NA19063.hp1 NA19086.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0086 others(7): Show a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0133 a0001c0001t0005g0081 a0001c0001t0005g0084	10	141	0.0709	8	c.83- others(27): Show c.83-263507_83-263500dupGTGTGTGT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104946379	C C	CAAAAAAA others(1): Show CAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00673.hp1 HG01069.hp1 others(29): Show HG00609.hp1 HG00673.hp1 HG01069.hp1 HG01099.hp1 HG01106.hp1 HG01261.hp1 HG01928.hp1 HG02015.hp1 HG02027.hp1 HG02071.hp1 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02622.hp2 HG02818.hp2 HG03490.hp1 HG04199.hp1 NA18747.hp1 NA18940.hp1 NA18944.hp1 NA18971.hp1 NA18995.hp1 NA19012.hp1 NA19043.hp1 NA19060.hp1 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19085.hp1 NA19089.hp1 NA20129.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0010 others(29): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0057 a0001c0001t0001g0080 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0111 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0124 a0001c0002t0001g0011 a0001c0002t0001g0017 a0001c0002t0001g0025 a0001c0002t0001g0028	32	141	0.2270	8	c.83- others(27): Show c.83-249073_83-249066dupAAAAAAAA	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104981055	T T	TTGTGTGT others(1): Show TTGTGTGTG	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02647.hp1 HG03130.hp1 others(3): Show HG02559.hp1 HG02647.hp1 HG03130.hp1 HG03225.hp1 HG06807.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0001 a0001c0001t0002 a0001c0001t0006	a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0002g0129 others(3): Show a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0137 a0001c0001t0006g0134	6	141	0.0426	8	c.83- others(27): Show c.83-214392_83-214385dupGTGTGTGT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105012598	T T	TTCTCTCT others(1): Show TTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01261.hp1 HG01884.hp2 others(1): Show HG00642.hp1 HG01261.hp1 HG01884.hp2 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0039 a0001c0001t0001g0043 others(1): Show a0001c0001t0001g0023 a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0056	4	141	0.0284	8	c.83- others(27): Show c.83-182836_83-182829dupTCTCTCTC	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105012645	T T	TCTCTCTC others(1): Show TCTCTCTCA	intron_variant intron_variant	MODIFIER	HG04204.hp1 NA18944.hp1 NA19062.hp1 HG04204.hp1 NA18944.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0047 a0001c0001t0001g0118 a0001c0001t0001g0040 a0001c0001t0001g0047 a0001c0001t0001g0118	3	141	0.0213	8	c.83- others(27): Show c.83-182829_83-182828insTCTCTCAC	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105012674	C C	CACACAGA others(1): Show CACACAGAG	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02965.hp1 HG02717.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0066 a0001c0001t0002g0136 a0001c0001t0001g0066 a0001c0001t0002g0136	2	141	0.0142	8	c.83- others(27): Show c.83-182800_83-182799insCACAGAGA	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105031783	C C	CTTTTTCA others(1): Show CTTTTTCAA	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02717.hp1 HG03579.hp1 HG02055.hp1 HG02717.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0127 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0127	3	141	0.0213	8	c.83- others(27): Show c.83-163689_83-163682dupTTTCAATT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105086260	T T	TACACACA others(1): Show TACACACAC	intron_variant intron_variant	MODIFIER	HG06807.hp1 NA20129.hp1 HG06807.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0074 a0001c0002t0001g0019 a0001c0001t0001g0074 a0001c0002t0001g0019	2	141	0.0142	8	c.83- others(27): Show c.83-109199_83-109192dupCACACACA	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105097330	C C	CAAAAAAA others(1): Show CAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0120 a0001c0001t0001g0120	1	141	0.0071	8	c.83- others(25): Show c.83-98128_83-98121dupAAAAAAAA	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105168414	G G	GGTGTGTG others(1): Show GGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03130.hp1 HG03486.hp1 others(1): Show HG02559.hp2 HG03130.hp1 HG03486.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0001 a0001c0001t0002 a0001c0001t0006	a0001c0001t0001g0067 a0001c0001t0002g0137 a0001c0001t0002g0138 others(1): Show a0001c0001t0001g0067 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0006g0134	4	141	0.0284	8	c.83- others(25): Show c.83-27029_83-27022dupTGTGTGTG	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105169492	C C	CTTTTTTT others(1): Show CTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0127	1	141	0.0071	8	c.83- others(25): Show c.83-25960_83-25953dupTTTTTTTT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105205587	T T	TAAAAAAA others(1): Show TAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01258.hp1 HG02132.hp1 HG03486.hp1 others(1): Show HG01258.hp1 HG02132.hp1 HG03486.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0078 a0001c0001t0002g0138 a0001c0002t0001g0028 others(1): Show a0001c0001t0001g0078 a0001c0001t0002g0138 a0001c0002t0001g0028 a0001c0002t0001g0050	4	141	0.0284	8	c.356 others(25): Show c.356+9870_356+9877dupAAAAAAAA	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	3/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105261478	T T	TTTTGTTT others(1): Show TTTTGTTTG	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02145.hp1 HG02258.hp1 others(2): Show HG01243.hp2 HG02145.hp1 HG02258.hp1 HG02622.hp2 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 others(2): Show a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0126	5	141	0.0355	8	c.544 others(25): Show c.544-5886_544-5879dupGTTTGTTT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	4/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105315578	G G	GTATATAT others(1): Show GTATATATA	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02559.hp1 HG02622.hp1 others(9): Show HG02258.hp1 HG02559.hp1 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02818.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 NA18995.hp1 NA19079.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0002t0001	a0001c0001t0001g0044 a0001c0001t0001g0064 a0001c0001t0001g0065 others(9): Show a0001c0001t0001g0044 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0080 a0001c0001t0001g0120 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0002g0138 a0001c0001t0004g0128 a0001c0002t0001g0132	12	141	0.0851	8	c.697 others(27): Show c.697+48053_697+48060dupATATATAT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	5/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105325541	T T	TTATATAT others(1): Show TTATATATA	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03579.hp1 HG02622.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0068 a0001c0001t0004g0128 a0001c0001t0001g0068 a0001c0001t0004g0128	2	141	0.0142	8	c.697 others(27): Show c.697+58029_697+58036dupTATATATA	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	5/10	INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105356184	G G	GTGTGGTT others(1): Show GTGTGGTTT	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	141	0.0071	8	c.697 others(27): Show c.697+88643_697+88644insTGTGGTTT	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	5/10		chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	105378765	C C	CTAACTGT others(1): Show CTAACTGTA	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	141	0.0071	8	c.698 others(29): Show c.698-105548_698-105547insTAACTGTA	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	5/10		chrX	TogoVar

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