view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SOCS2_chr12_93567675_93581745 | 93578682 | G | GCACACAC others(1): Show |
downstream_gene_variant | MODIFIER | HG00140.hp1 HG00642.hp1 HG00741.hp2 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0004t0001 | a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0004t0001g0029 |
6 | 438 | 0.0137 | 8 | c.*35 others(19): Show |
SOCS2 | ENSG00000120833.14 | transcript | ENST00000551556.2 | protein_coding | 1938 | chr12 | TogoVar | |||||||
SOCS3_chr17_78351778_78365077 | 78362309 | C | CAAAAAAA others(1): Show |
upstream_gene_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00323.hp2 others(38): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(3): Show | a0001c0001t0001g0001 a0001c0001t0002g0002 a0001c0001t0008g0007 others(3): Show |
41 | 468 | 0.0876 | 8 | c.-26 others(19): Show |
SOCS3 | ENSG00000184557.4 | transcript | ENST00000330871.3 | protein_coding | 2233 | chr17 | TogoVar | |||||||
SOCS7_chr17_38346844_38410593 | 38386323 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG01256.hp2 HG01257.hp1 HG01258.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0049a0001c0002t0002a0001c0002t0008others(3): Show | a0001c0001t0049g0003 a0001c0002t0002g0001 a0001c0002t0002g0046 others(6): Show |
10 | 289 | 0.0346 | 8 | c.168 others(27): Show |
SOCS7 | ENSG00000274211.6 | transcript | ENST00000612932.6 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SOCS7_chr17_38346844_38410593 | 38390640 | T | TTTCCTTC others(1): Show |
intron_variant | MODIFIER | HG00733.hp2 HG01106.hp1 HG01243.hp2 others(19): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(9): Show | a0001c0001t0001g0043 a0001c0001t0001g0146 a0001c0001t0001g0156 others(19): Show |
22 | 289 | 0.0761 | 8 | c.168 others(27): Show |
SOCS7 | ENSG00000274211.6 | transcript | ENST00000612932.6 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SOD2_chr6_159664069_159698241 | 159697034 | G | GACACACA others(1): Show |
upstream_gene_variant | MODIFIER | HG01256.hp2 HG01346.hp2 HG01496.hp2 others(6): Show |
a0002 | a0002c0002 | a0002c0002t0003a0002c0002t0006a0002c0002t0019others(2): Show | a0002c0002t0003g0003 a0002c0002t0003g0021 a0002c0002t0003g0073 others(5): Show |
9 | 364 | 0.0247 | 8 | c.-38 others(19): Show |
SOD2 | ENSG00000291237.1 | transcript | ENST00000538183.7 | protein_coding | 3794 | chr6 | TogoVar | |||||||
SOD3_chr4_24790573_24805842 | 24796435 | C | CTTTTTTT others(1): Show |
intron_variant | MODIFIER | HG02015.hp1 HG02055.hp2 HG02257.hp2 others(9): Show |
a0001a0002a0003 | a0001c0003a0002c0002a0003c0004 | a0001c0003t0001a0002c0002t0004a0003c0004t0001 | a0001c0003t0001g0010 a0001c0003t0001g0038 a0001c0003t0001g0103 others(2): Show |
12 | 466 | 0.0258 | 8 | c.-17 others(23): Show |
SOD3 | ENSG00000109610.6 | transcript | ENST00000382120.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SOGA1_chr20_36772447_36868538 | 36810717 | C | CCTCTCTC others(1): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01071.hp1 HG01106.hp2 others(24): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0009others(3): Show | a0001c0001t0001a0001c0001t0019a0001c0001t0036others(8): Show | a0001c0001t0001g0139 a0001c0001t0001g0166 a0001c0001t0001g0188 others(24): Show |
27 | 282 | 0.0957 | 8 | c.245 others(25): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 6/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36826363 | T | TCCCCCCT others(1): Show |
intron_variant | MODIFIER | HG00735.hp1 HG01168.hp1 HG02145.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0007 | a0001c0001t0002a0001c0001t0003a0001c0002t0004others(1): Show | a0001c0001t0002g0109 a0001c0001t0002g0120 a0001c0001t0003g0228 others(2): Show |
5 | 282 | 0.0177 | 8 | c.107 others(27): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36827022 | C | CTTTATTT others(1): Show |
intron_variant | MODIFIER | HG01081.hp1 HG01975.hp1 HG01975.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0024others(6): Show | a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0184 others(10): Show |
13 | 282 | 0.0461 | 8 | c.107 others(27): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36841874 | G | GGGGTGTG others(1): Show |
intron_variant | MODIFIER | HG00280.hp1 HG00673.hp2 HG00738.hp2 others(29): Show |
a0001a0005a0007others(2): Show | a0001c0001a0001c0003a0005c0012others(3): Show | a0001c0001t0001a0001c0001t0020a0001c0001t0038others(7): Show | a0001c0001t0001g0003 a0001c0001t0001g0021 a0001c0001t0001g0107 others(29): Show |
32 | 282 | 0.1135 | 8 | c.688 others(25): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36841874 | G | GGTGTGTG others(1): Show |
intron_variant | MODIFIER | HG00738.hp1 HG01167.hp1 HG01169.hp1 others(3): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0001a0001c0001t0006a0002c0004t0010 | a0001c0001t0001g0273 a0001c0001t0006g0004 a0002c0004t0010g0080 others(3): Show |
6 | 282 | 0.0213 | 8 | c.688 others(25): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | |||||||
SOHLH1_chr9_135688407_135704481 | 135701781 | G | GGCAGAGC others(1): Show |
upstream_gene_variant | MODIFIER | HG00438.hp1 HG00544.hp1 HG00609.hp2 others(57): Show |
a0002a0009a0013others(2): Show | a0002c0002a0009c0022a0013c0024others(2): Show | a0002c0002t0001a0002c0002t0003a0009c0022t0001others(3): Show | a0002c0002t0001g0004 a0002c0002t0001g0015 a0002c0002t0001g0027 others(8): Show |
60 | 418 | 0.1435 | 8 | c.-23 others(19): Show |
SOHLH1 | ENSG00000165643.11 | transcript | ENST00000425225.2 | protein_coding | 2301 | chr9 | TogoVar | |||||||
SOHLH2_chr13_36163217_36219556 | 36196097 | A | AAGATAGA others(1): Show |
intron_variant | MODIFIER | HG02622.hp1 HG02630.hp1 HG02886.hp1 others(4): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0141 a0001c0001t0001g0220 a0001c0001t0001g0228 others(4): Show |
7 | 420 | 0.0167 | 8 | c.264 others(25): Show |
SOHLH2 | ENSG00000120669.16 | transcript | ENST00000379881.8 | protein_coding | 2/10 | chr13 | TogoVar | |||||||
SOHLH2_chr13_36163217_36219556 | 36219115 | A | AAAAAAAA others(1): Show |
upstream_gene_variant | MODIFIER | HG00673.hp1 HG03491.hp1 HG04115.hp1 others(3): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0049 a0002c0002t0001g0055 a0002c0002t0001g0065 others(3): Show |
6 | 420 | 0.0143 | 8 | c.-45 others(19): Show |
SOHLH2 | ENSG00000120669.16 | transcript | ENST00000379881.8 | protein_coding | 4560 | chr13 | TogoVar | |||||||
SORBS1_chr10_95306773_95566371 | 95318022 | C | CAATAAAT others(1): Show |
intron_variant | MODIFIER | HG02109.hp2 HG02148.hp1 HG02155.hp2 others(16): Show |
a0001a0002a0007others(1): Show | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0003a0001c0001t0006a0001c0002t0001others(8): Show | a0001c0001t0003g0026 a0001c0001t0003g0155 a0001c0001t0003g0211 others(16): Show |
19 | 300 | 0.0633 | 8 | c.381 others(25): Show |
SORBS1 | ENSG00000095637.23 | transcript | ENST00000371247.7 | protein_coding | 32/32 | chr10 | TogoVar | |||||||
SORBS1_chr10_95306773_95566371 | 95358720 | G | GCACACAC others(1): Show |
intron_variant | MODIFIER | HG02145.hp1 HG02559.hp1 NA20129.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0082 a0001c0002t0001g0112 a0001c0002t0001g0149 |
3 | 300 | 0.0100 | 8 | c.195 others(25): Show |
SORBS1 | ENSG00000095637.23 | transcript | ENST00000371247.7 | protein_coding | 22/32 | chr10 | TogoVar | |||||||
SORBS1_chr10_95306773_95566371 | 95365173 | A | ATGTGTGT others(1): Show |
intron_variant | MODIFIER | HG00639.hp1 HG00642.hp2 HG00735.hp1 others(17): Show |
a0001a0003a0005 | a0001c0002a0001c0003a0001c0004others(3): Show | a0001c0002t0001a0001c0002t0002a0001c0003t0001others(5): Show | a0001c0002t0001g0170 a0001c0002t0001g0224 a0001c0002t0001g0244 others(17): Show |
20 | 300 | 0.0667 | 8 | c.195 others(27): Show |
SORBS1 | ENSG00000095637.23 | transcript | ENST00000371247.7 | protein_coding | 22/32 | chr10 | TogoVar | |||||||
SORBS1_chr10_95306773_95566371 | 95378737 | A | ATGTGTGT others(1): Show |
intron_variant | MODIFIER | HG02145.hp2 HG03017.hp2 HG03041.hp2 others(1): Show |
a0001a0004 | a0001c0022a0004c0017a0004c0033 | a0001c0022t0001a0004c0017t0012a0004c0033t0012 | a0001c0022t0001g0115 a0001c0022t0001g0279 a0004c0017t0012g0085 others(1): Show |
4 | 300 | 0.0133 | 8 | c.165 others(27): Show |
SORBS1 | ENSG00000095637.23 | transcript | ENST00000371247.7 | protein_coding | 18/32 | chr10 | TogoVar | |||||||
SORBS1_chr10_95306773_95566371 | 95494867 | A | ATTTATTT others(1): Show |
intron_variant | MODIFIER | HG01081.hp1 HG01168.hp2 HG01169.hp2 others(13): Show |
a0001a0003a0010 | a0001c0001a0001c0003a0003c0005others(4): Show | a0001c0001t0003a0001c0001t0004a0001c0003t0002others(7): Show | a0001c0001t0003g0300 a0001c0001t0004g0118 a0001c0001t0004g0159 others(13): Show |
16 | 300 | 0.0533 | 8 | c.-13 others(27): Show |
SORBS1 | ENSG00000095637.23 | transcript | ENST00000371247.7 | protein_coding | 1/32 | chr10 | TogoVar | |||||||
SORBS1_chr10_95306773_95566371 | 95502998 | A | AACACACA others(1): Show |
intron_variant | MODIFIER | HG00438.hp1 HG00558.hp2 HG01081.hp1 others(39): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(24): Show | a0001c0001t0001g0269 a0001c0001t0003g0268 a0001c0001t0003g0270 others(39): Show |
42 | 300 | 0.1400 | 8 | c.-13 others(29): Show |
SORBS1 | ENSG00000095637.23 | transcript | ENST00000371247.7 | protein_coding | 1/32 | chr10 | TogoVar | |||||||
SORBS1_chr10_95306773_95566371 | 95554692 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG02027.hp1 HG02040.hp2 HG02071.hp1 others(14): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0027others(9): Show | a0001c0001t0001g0269 a0001c0001t0003g0158 a0001c0001t0003g0268 others(14): Show |
17 | 300 | 0.0567 | 8 | c.-13 others(27): Show |
SORBS1 | ENSG00000095637.23 | transcript | ENST00000371247.7 | protein_coding | 1/32 | chr10 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185684009 | G | GCCAACCA others(1): Show |
intron_variant | MODIFIER | HG01074.hp2 HG01106.hp2 HG01109.hp2 others(22): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0011others(19): Show | a0001c0001t0001g0054 a0001c0001t0001g0216 a0001c0001t0003g0062 others(22): Show |
25 | 312 | 0.0801 | 8 | c.103 others(23): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 5/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185688492 | T | TGATAGAT others(1): Show |
intron_variant | MODIFIER | HG01069.hp1 HG01071.hp1 HG01175.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0009a0001c0001t0048 | a0001c0001t0006g0064 a0001c0001t0009g0227 a0001c0001t0009g0228 others(2): Show |
5 | 312 | 0.0160 | 8 | c.10+ others(23): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 4/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185694706 | C | CTTTTTTT others(1): Show |
intron_variant | MODIFIER | HG00323.hp2 HG00408.hp1 HG00408.hp2 others(117): Show |
a0001a0005a0007others(3): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(40): Show | a0001c0001t0001g0023 a0001c0001t0001g0040 a0001c0001t0001g0041 others(117): Show |
120 | 312 | 0.3846 | 8 | c.-40 others(25): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185721084 | C | CTTTTTTT others(1): Show |
intron_variant | MODIFIER | HG00621.hp1 HG01358.hp1 HG02622.hp2 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0175 a0001c0001t0001g0195 a0001c0001t0001g0258 others(11): Show |
14 | 312 | 0.0449 | 8 | c.-41 others(27): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185731832 | T | TTCTCTCT others(1): Show |
intron_variant | MODIFIER | HG00621.hp1 HG01074.hp2 HG01255.hp1 others(7): Show |
a0001a0014 | a0001c0001a0001c0007a0001c0008others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(5): Show | a0001c0001t0001g0056 a0001c0001t0002g0053 a0001c0001t0002g0188 others(7): Show |
10 | 312 | 0.0321 | 8 | c.-41 others(25): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 3/26 | chr4 | TogoVar | |||||||
SORBS2_chr4_185580523_185817194 | 185814553 | A | AAAACAAA others(1): Show |
upstream_gene_variant | MODIFIER | HG00621.hp2 HG02155.hp1 HG02965.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0009others(2): Show | a0001c0001t0002g0047 a0001c0001t0003g0280 a0001c0001t0009g0267 others(2): Show |
5 | 312 | 0.0160 | 8 | c.-31 others(19): Show |
SORBS2 | ENSG00000154556.20 | transcript | ENST00000695409.1 | protein_coding | 2360 | chr4 | TogoVar | |||||||
SORBS3_chr8_22546927_22580788 | 22575902 | T | TTGTGTGT others(1): Show |
downstream_gene_variant | MODIFIER | HG00323.hp1 HG00438.hp1 HG00544.hp1 others(58): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0004a0001c0005others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(14): Show | a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0011 others(49): Show |
61 | 428 | 0.1425 | 8 | c.*11 others(19): Show |
SORBS3 | ENSG00000120896.14 | transcript | ENST00000240123.12 | protein_coding | 115 | chr8 | TogoVar | |||||||
SORBS3_chr8_22546927_22580788 | 22576033 | T | TTGTTTGT others(1): Show |
downstream_gene_variant | MODIFIER | HG00323.hp2 HG01069.hp1 HG01069.hp2 others(21): Show |
a0001a0003a0005others(4): Show | a0001c0001a0001c0004a0001c0012others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(10): Show | a0001c0001t0001g0080 a0001c0001t0001g0202 a0001c0001t0001g0312 others(20): Show |
24 | 428 | 0.0561 | 8 | c.*13 others(19): Show |
SORBS3 | ENSG00000120896.14 | transcript | ENST00000240123.12 | protein_coding | 246 | chr8 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106602512 | A | AACACACA others(1): Show |
intron_variant | MODIFIER | HG01496.hp2 HG02056.hp1 HG02895.hp2 others(1): Show |
a0001a0013 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0017a0001c0002t0003a0001c0003t0001others(1): Show | a0001c0001t0017g0118 a0001c0002t0003g0058 a0001c0003t0001g0100 others(1): Show |
4 | 130 | 0.0308 | 8 | c.316 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 23/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106647389 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG00438.hp1 HG01891.hp2 HG02965.hp2 others(2): Show |
a0001a0006 | a0001c0001a0001c0009a0006c0026 | a0001c0001t0002a0001c0009t0001a0006c0026t0001 | a0001c0001t0002g0012 a0001c0001t0002g0059 a0001c0001t0002g0061 others(2): Show |
5 | 130 | 0.0385 | 8 | c.247 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 18/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106722120 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00544.hp1 HG00544.hp2 others(41): Show |
a0001a0002a0011 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0110 others(41): Show |
44 | 130 | 0.3385 | 8 | c.102 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 6/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106725559 | A | AAAATAAA others(1): Show |
intron_variant | MODIFIER | HG00597.hp1 NA18962.hp1 NA18971.hp2 others(3): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0025 a0001c0001t0001g0110 a0001c0001t0002g0027 others(3): Show |
6 | 130 | 0.0462 | 8 | c.102 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 6/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106726185 | C | CTCTTTTT others(1): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00438.hp2 HG00544.hp1 others(36): Show |
a0001a0002a0004others(4): Show | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0009others(17): Show | a0001c0001t0002g0069 a0001c0001t0002g0084 a0001c0001t0002g0096 others(36): Show |
39 | 130 | 0.3000 | 8 | c.102 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 6/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106850233 | G | GCGAGACT others(1): Show |
intron_variant | MODIFIER | HG02896.hp2 NA18906.hp2 |
a0001 | a0001c0002a0001c0004 | a0001c0002t0001a0001c0004t0007 | a0001c0002t0001g0122 a0001c0004t0007g0002 |
2 | 130 | 0.0154 | 8 | c.627 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 2/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106895949 | G | GTATATAT others(1): Show |
intron_variant | MODIFIER | HG03041.hp1 NA19043.hp2 |
a0002a0004 | a0002c0006a0004c0023 | a0002c0006t0001a0004c0023t0006 | a0002c0006t0001g0014 a0004c0023t0006g0091 |
2 | 130 | 0.0154 | 8 | c.626 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 2/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106916575 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | NA18957.hp2 NA18971.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0002a0001c0003t0022 | a0001c0001t0002g0027 a0001c0003t0022g0129 |
2 | 130 | 0.0154 | 8 | c.626 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 2/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106924466 | G | GATCTATC others(1): Show |
intron_variant | MODIFIER | HG00544.hp1 HG02145.hp2 HG02717.hp1 others(1): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0001a0001c0001t0002a0001c0009t0001 | a0001c0001t0001g0073 a0001c0001t0002g0069 a0001c0001t0002g0074 others(1): Show |
4 | 130 | 0.0308 | 8 | c.626 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 2/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 106976335 | T | TTTGTTTT others(1): Show |
intron_variant | MODIFIER | HG01243.hp2 HG01884.hp1 HG02451.hp2 others(4): Show |
a0001a0002a0008 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0008a0001c0002t0002a0001c0002t0006others(4): Show | a0001c0001t0008g0001 a0001c0002t0002g0077 a0001c0002t0006g0049 others(4): Show |
7 | 130 | 0.0539 | 8 | c.559 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 1/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 107065415 | T | TTTTCTTT others(1): Show |
intron_variant | MODIFIER | HG00544.hp1 HG00558.hp1 HG01993.hp2 others(14): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0025 a0001c0001t0002g0066 a0001c0001t0002g0069 others(14): Show |
17 | 130 | 0.1308 | 8 | c.558 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 1/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 107065510 | C | CTCTTTCT others(1): Show |
intron_variant | MODIFIER | HG00558.hp2 HG02083.hp1 HG02559.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0020a0001c0002t0003others(3): Show | a0001c0001t0001g0036 a0001c0001t0020g0021 a0001c0002t0003g0081 others(3): Show |
6 | 130 | 0.0462 | 8 | c.558 others(27): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 1/25 | chr10 | TogoVar | |||||||
SORCS1_chr10_106568663_107169706 | 107165292 | A | AGTGTGTG others(1): Show |
upstream_gene_variant | MODIFIER | HG01884.hp1 HG01981.hp1 HG02273.hp1 others(4): Show |
a0001a0002a0004 | a0001c0002a0001c0003a0001c0027others(3): Show | a0001c0002t0003a0001c0002t0006a0001c0003t0001others(4): Show | a0001c0002t0003g0026 a0001c0002t0006g0051 a0001c0003t0001g0033 others(4): Show |
7 | 130 | 0.0539 | 8 | c.-76 others(17): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 587 | chr10 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7224471 | A | ATCTGGCC others(1): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00733.hp1 HG01109.hp2 others(41): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(16): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(40): Show | a0001c0001t0002g0089 a0001c0001t0003g0048 a0001c0001t0004g0138 others(41): Show |
44 | 168 | 0.2619 | 8 | c.480 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7262375 | T | TATCCATC others(1): Show |
intron_variant | MODIFIER | HG01884.hp2 HG03139.hp2 HG03540.hp1 others(3): Show |
a0001a0005 | a0001c0001a0001c0003a0001c0009others(3): Show | a0001c0001t0004a0001c0003t0019a0001c0009t0051others(3): Show | a0001c0001t0004g0138 a0001c0003t0019g0023 a0001c0009t0051g0042 others(3): Show |
6 | 168 | 0.0357 | 8 | c.480 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7290796 | T | TTTCATTC others(1): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp2 others(55): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0003others(20): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(51): Show | a0001c0001t0002g0089 a0001c0001t0003g0098 a0001c0001t0005g0067 others(55): Show |
58 | 168 | 0.3452 | 8 | c.480 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7316212 | T | TTCCATCC others(1): Show |
intron_variant | MODIFIER | HG01106.hp2 HG01123.hp1 HG01123.hp2 others(11): Show |
a0001a0013 | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0010a0001c0001t0050a0001c0001t0069others(11): Show | a0001c0001t0010g0129 a0001c0001t0050g0106 a0001c0001t0069g0092 others(11): Show |
14 | 168 | 0.0833 | 8 | c.481 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7338421 | A | AGGATGGA others(1): Show |
intron_variant | MODIFIER | HG01346.hp1 HG03017.hp1 HG03225.hp1 others(1): Show |
a0001a0002a0010 | a0001c0001a0001c0005a0002c0050others(1): Show | a0001c0001t0005a0001c0005t0019a0002c0050t0045others(1): Show | a0001c0001t0005g0130 a0001c0005t0019g0104 a0002c0050t0045g0132 others(1): Show |
4 | 168 | 0.0238 | 8 | c.481 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7360571 | C | CTTTTTTT others(1): Show |
intron_variant | MODIFIER | HG00438.hp2 HG00642.hp1 HG01123.hp1 others(10): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0010a0001c0001t0012a0001c0002t0002others(10): Show | a0001c0001t0010g0129 a0001c0001t0012g0036 a0001c0002t0002g0133 others(10): Show |
13 | 168 | 0.0774 | 8 | c.481 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7374129 | C | CTCTTTCT others(1): Show |
intron_variant | MODIFIER | HG01123.hp1 HG01175.hp1 HG01261.hp2 others(3): Show |
a0001a0013 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0069a0001c0002t0001a0001c0002t0007others(3): Show | a0001c0001t0069g0092 a0001c0002t0001g0143 a0001c0002t0007g0008 others(3): Show |
6 | 168 | 0.0357 | 8 | c.481 others(27): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7387328 | A | ATGCACAT others(1): Show |
intron_variant | MODIFIER | HG01261.hp2 HG03540.hp2 |
a0001 | a0001c0001a0001c0009 | a0001c0001t0069a0001c0009t0051 | a0001c0001t0069g0092 a0001c0009t0051g0042 |
2 | 168 | 0.0119 | 8 | c.481 others(25): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | chr4 | TogoVar |