view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPCS3_chr4_176314966_176337245 | 176334634 | T | TACACACA others(1): Show |
downstream_gene_variant | MODIFIER | HG02055.hp1 NA18956.hp2 NA18957.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0010 | a0001c0001t0001g0002 a0001c0001t0004g0002 a0001c0001t0010g0002 |
4 | 470 | 0.0085 | 8 | c.*63 others(19): Show |
SPCS3 | ENSG00000129128.13 | transcript | ENST00000503362.2 | protein_coding | 2390 | chr4 | TogoVar | |||||||
SPCS3_chr4_176314966_176337245 | 176334636 | T | TACACACA others(1): Show |
downstream_gene_variant | MODIFIER | HG00621.hp1 HG00741.hp2 HG02109.hp1 others(37): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(1): Show | a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0022 others(9): Show |
40 | 470 | 0.0851 | 8 | c.*63 others(19): Show |
SPCS3 | ENSG00000129128.13 | transcript | ENST00000503362.2 | protein_coding | 2392 | chr4 | TogoVar | |||||||
SPDL1_chr5_169578773_169609778 | 169585016 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG01109.hp1 HG01168.hp1 HG01169.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0136 others(7): Show |
12 | 398 | 0.0302 | 8 | c.-24 others(25): Show |
SPDL1 | ENSG00000040275.17 | transcript | ENST00000265295.9 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPDL1_chr5_169578773_169609778 | 169605573 | T | TGATAGAT others(1): Show |
downstream_gene_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00408.hp2 others(131): Show |
a0001a0002a0008others(2): Show | a0001c0001a0001c0013a0002c0002others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0013t0001others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(61): Show |
134 | 398 | 0.3367 | 8 | c.*13 others(19): Show |
SPDL1 | ENSG00000040275.17 | transcript | ENST00000265295.9 | protein_coding | 796 | chr5 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28815283 | A | AACACACA others(1): Show |
intron_variant | MODIFIER | HG03927.hp1 NA18960.hp1 NA19065.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0050 a0001c0001t0001g0189 a0001c0001t0001g0202 |
3 | 338 | 0.0089 | 8 | c.-19 others(23): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28823702 | A | AATATATA others(1): Show |
intron_variant | MODIFIER | HG00621.hp1 HG01081.hp1 HG01257.hp2 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0039 a0001c0001t0001g0116 a0001c0001t0001g0117 others(16): Show |
19 | 338 | 0.0562 | 8 | c.380 others(25): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28834081 | A | AACACACA others(1): Show |
intron_variant | MODIFIER | HG02071.hp2 HG02572.hp2 HG03195.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0117 a0001c0001t0001g0234 a0001c0001t0001g0235 others(1): Show |
4 | 338 | 0.0118 | 8 | c.552 others(25): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYC_chr11_65165233_65178374 | 65166391 | C | CTTTTTTT others(1): Show |
upstream_gene_variant | MODIFIER | HG01952.hp1 HG02074.hp1 NA18947.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0008 others(1): Show |
6 | 442 | 0.0136 | 8 | c.-39 others(19): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 3841 | chr11 | TogoVar | |||||||
SPDYC_chr11_65165233_65178374 | 65170895 | C | CAAAAACC others(1): Show |
intron_variant | MODIFIER | HG01891.hp2 HG02451.hp1 HG02976.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009 | 5 | 442 | 0.0113 | 8 | c.-31 others(23): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SPDYE10_chr7_73099008_73160431 | 73123782 | T | TCTCTCTC others(1): Show |
intron_variant | MODIFIER | HG02738.hp1 NA19079.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0003a0002c0003t0002 | a0001c0001t0003g0195 a0002c0003t0002g0161 |
2 | 216 | 0.0093 | 8 | c.-63 others(27): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73123788 | C | CCTCTCTC others(1): Show |
intron_variant | MODIFIER | HG00544.hp1 HG01258.hp2 HG02074.hp1 others(14): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0017others(7): Show | a0001c0001t0002g0013 a0001c0001t0002g0018 a0001c0001t0002g0147 others(14): Show |
17 | 216 | 0.0787 | 8 | c.-63 others(27): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73124921 | C | CTAAATAA others(1): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01169.hp2 HG01884.hp1 others(12): Show |
a0001a0003 | a0001c0001a0001c0006a0003c0005 | a0001c0001t0019a0001c0006t0005a0003c0005t0005others(2): Show | a0001c0001t0019g0047 a0001c0006t0005g0213 a0003c0005t0005g0128 others(12): Show |
15 | 216 | 0.0694 | 8 | c.-63 others(27): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73131203 | T | TAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG00280.hp1 HG00438.hp2 HG00609.hp1 others(69): Show |
a0001a0002a0003others(3): Show | a0001c0002a0001c0006a0001c0016others(5): Show | a0001c0002t0001a0001c0002t0021a0001c0006t0001others(11): Show | a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0050 others(69): Show |
72 | 216 | 0.3333 | 8 | c.-63 others(29): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73135406 | G | GCATTCAT others(1): Show |
intron_variant | MODIFIER | HG02809.hp2 HG03516.hp1 NA18990.hp1 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0002c0003t0004a0002c0003t0011 | a0001c0001t0002g0205 a0002c0003t0004g0009 a0002c0003t0011g0207 |
3 | 216 | 0.0139 | 8 | c.-63 others(29): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73137593 | T | TGAAAGAA others(1): Show |
intron_variant | MODIFIER | HG00544.hp2 HG00609.hp2 HG01361.hp2 others(22): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0002c0003others(5): Show | a0001c0001t0002a0001c0002t0001a0002c0003t0001others(10): Show | a0001c0001t0002g0034 a0001c0001t0002g0163 a0001c0002t0001g0049 others(22): Show |
25 | 216 | 0.1157 | 8 | c.-64 others(29): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73142980 | G | GAGGAAGG others(1): Show |
intron_variant | MODIFIER | HG00673.hp1 HG01258.hp2 HG01346.hp2 others(10): Show |
a0001a0002a0003 | a0001c0001a0002c0003a0002c0004others(1): Show | a0001c0001t0002a0001c0001t0003a0002c0003t0001others(4): Show | a0001c0001t0002g0163 a0001c0001t0002g0167 a0001c0001t0002g0197 others(10): Show |
13 | 216 | 0.0602 | 8 | c.-64 others(29): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73142980 | G | GAGGGAGG others(1): Show |
intron_variant | MODIFIER | HG00733.hp2 HG00735.hp1 HG00738.hp2 others(6): Show |
a0001a0011 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0002a0001c0001t0004a0001c0002t0001others(3): Show | a0001c0001t0002g0188 a0001c0001t0004g0033 a0001c0002t0001g0001 others(6): Show |
9 | 216 | 0.0417 | 8 | c.-64 others(29): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73143030 | G | GGAAGGAA others(1): Show |
intron_variant | MODIFIER | HG02698.hp2 HG03669.hp2 HG04204.hp1 |
a0001 | a0001c0006 | a0001c0006t0014a0001c0006t0025 | a0001c0006t0014g0214 a0001c0006t0014g0215 a0001c0006t0025g0216 |
3 | 216 | 0.0139 | 8 | c.-64 others(29): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 1/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73156138 | A | ACACACAC others(1): Show |
upstream_gene_variant | MODIFIER | HG00423.hp2 HG00733.hp2 HG03486.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0004 | a0001c0001t0002g0163 a0001c0001t0003g0162 a0001c0001t0004g0030 others(1): Show |
4 | 216 | 0.0185 | 8 | c.-14 others(19): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 708 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73156167 | G | GTCTCTCT others(1): Show |
upstream_gene_variant | MODIFIER | HG00609.hp2 HG02647.hp1 HG03130.hp1 others(2): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0001c0001t0019a0002c0003t0002others(1): Show | a0001c0001t0002g0012 a0001c0001t0002g0163 a0001c0001t0019g0047 others(2): Show |
5 | 216 | 0.0232 | 8 | c.-14 others(19): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 737 | chr7 | TogoVar | |||||||
SPDYE12_chr7_74899289_74920078 | 74903999 | A | AAAACAAA others(1): Show |
downstream_gene_variant | MODIFIER | HG00738.hp2 HG01257.hp2 HG01361.hp2 others(5): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0012 | a0001c0001t0001g0006 a0001c0001t0001g0020 a0001c0001t0001g0033 others(2): Show |
8 | 350 | 0.0229 | 8 | c.*18 others(19): Show |
SPDYE12 | ENSG00000184616.12 | transcript | ENST00000618416.5 | protein_coding | 289 | chr7 | TogoVar | |||||||
SPDYE12_chr7_74899289_74920078 | 74907732 | G | GATAAATA others(1): Show |
intron_variant | MODIFIER | HG02155.hp2 HG03098.hp2 NA20300.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0059 a0001c0001t0001g0093 a0001c0001t0001g0126 |
3 | 350 | 0.0086 | 8 | c.495 others(23): Show |
SPDYE12 | ENSG00000184616.12 | transcript | ENST00000618416.5 | protein_coding | 5/7 | chr7 | TogoVar | |||||||
SPDYE17_chr7_77017306_77037361 | 77025745 | G | GATAAATA others(1): Show |
intron_variant | MODIFIER | HG01346.hp1 HG01496.hp2 HG01516.hp2 others(25): Show |
a0002a0003a0011others(1): Show | a0002c0002a0003c0003a0011c0008others(1): Show | a0002c0002t0002a0002c0002t0004a0003c0003t0008others(4): Show | a0002c0002t0002g0072 a0002c0002t0002g0077 a0002c0002t0002g0081 others(16): Show |
28 | 295 | 0.0949 | 8 | c.495 others(23): Show |
SPDYE17 | ENSG00000186645.11 | transcript | ENST00000671986.3 | protein_coding | 5/7 | chr7 | TogoVar | |||||||
SPDYE17_chr7_77017306_77037361 | 77031698 | A | AAACAAAA others(1): Show |
intron_variant | MODIFIER | HG02886.hp1 HG03471.hp2 NA18939.hp2 |
a0001a0010 | a0001c0001a0010c0013 | a0001c0001t0016a0010c0013t0003 | a0001c0001t0016g0136 a0001c0001t0016g0137 a0010c0013t0003g0142 |
3 | 295 | 0.0102 | 8 | c.-45 others(25): Show |
SPDYE17 | ENSG00000186645.11 | transcript | ENST00000671986.3 | protein_coding | 1/7 | chr7 | TogoVar | |||||||
SPDYE17_chr7_77017306_77037361 | 77036216 | A | ATGTGTGT others(1): Show |
upstream_gene_variant | MODIFIER | HG01167.hp1 HG02486.hp2 HG03098.hp2 others(1): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0003 | a0001c0001t0001g0019 a0001c0001t0001g0118 a0003c0003t0003g0001 |
4 | 295 | 0.0136 | 8 | c.-44 others(19): Show |
SPDYE17 | ENSG00000186645.11 | transcript | ENST00000671986.3 | protein_coding | 3856 | chr7 | TogoVar | |||||||
SPDYE18_chr7_77045391_77067558 | 77056411 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00544.hp2 others(45): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0004 | a0001c0001t0001a0001c0001t0021a0001c0001t0038others(2): Show | a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0022 others(20): Show |
48 | 416 | 0.1154 | 8 | c.669 others(23): Show |
SPDYE18 | ENSG00000205482.11 | transcript | ENST00000510091.4 | protein_coding | 5/8 | chr7 | TogoVar | |||||||
SPDYE18_chr7_77045391_77067558 | 77064586 | T | TACACACA others(1): Show |
upstream_gene_variant | MODIFIER | HG00323.hp1 HG00408.hp2 HG00544.hp1 others(84): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 others(59): Show |
87 | 416 | 0.2091 | 8 | c.-25 others(19): Show |
SPDYE18 | ENSG00000205482.11 | transcript | ENST00000510091.4 | protein_coding | 2029 | chr7 | TogoVar | |||||||
SPDYE1_chr7_43992897_44015124 | 43995839 | C | CGTGTGTG others(1): Show |
upstream_gene_variant | MODIFIER | HG00280.hp2 HG00621.hp2 HG01123.hp2 others(21): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0006a0001c0001t0008a0002c0002t0001others(4): Show | a0001c0001t0006g0007 a0001c0001t0006g0032 a0001c0001t0008g0076 others(14): Show |
24 | 394 | 0.0609 | 8 | c.-25 others(19): Show |
SPDYE1 | ENSG00000136206.5 | transcript | ENST00000693451.1 | protein_coding | 2057 | chr7 | TogoVar | |||||||
SPDYE1_chr7_43992897_44015124 | 43995980 | T | TATGTATG others(1): Show |
upstream_gene_variant | MODIFIER | HG00280.hp2 HG00544.hp2 HG00738.hp2 others(34): Show |
a0003a0012a0013others(1): Show | a0003c0003a0012c0023a0013c0024others(1): Show | a0003c0003t0003a0003c0003t0011a0003c0003t0018others(3): Show | a0003c0003t0003g0005 a0003c0003t0003g0010 a0003c0003t0003g0017 others(21): Show |
37 | 394 | 0.0939 | 8 | c.-24 others(19): Show |
SPDYE1 | ENSG00000136206.5 | transcript | ENST00000693451.1 | protein_coding | 1916 | chr7 | TogoVar | |||||||
SPDYE21_chr7_67271941_67294005 | 67287363 | C | CACAGTTG others(1): Show |
intron_variant | MODIFIER | HG02698.hp1 HG03831.hp2 HG03834.hp2 others(1): Show |
a0003 | a0003c0003 | a0003c0003t0002 | a0003c0003t0002g0066 a0003c0003t0002g0181 a0003c0003t0002g0190 |
4 | 460 | 0.0087 | 8 | c.*46 others(23): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SPDYE2B_chr7_102645319_102667625 | 102646923 | G | GGAAAGAA others(1): Show |
upstream_gene_variant | MODIFIER | HG00733.hp1 HG00733.hp2 HG01175.hp2 others(6): Show |
a0002a0003a0004 | a0002c0002a0003c0003a0003c0004others(1): Show | a0002c0002t0002a0002c0002t0032a0003c0003t0004others(3): Show | a0002c0002t0002g0058 a0002c0002t0002g0059 a0002c0002t0002g0063 others(6): Show |
9 | 128 | 0.0703 | 8 | c.-38 others(19): Show |
SPDYE2B | ENSG00000173678.15 | transcript | ENST00000507450.6 | protein_coding | 3395 | chr7 | TogoVar | |||||||
SPDYE2B_chr7_102645319_102667625 | 102647004 | C | CTTTTTTT others(1): Show |
upstream_gene_variant | MODIFIER | HG00733.hp2 HG01517.hp2 HG02698.hp1 others(9): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0004a0002c0002t0032a0003c0003t0004others(6): Show | a0001c0001t0004g0099 a0002c0002t0032g0113 a0003c0003t0004g0091 others(9): Show |
12 | 128 | 0.0938 | 8 | c.-37 others(19): Show |
SPDYE2B | ENSG00000173678.15 | transcript | ENST00000507450.6 | protein_coding | 3314 | chr7 | TogoVar | |||||||
SPDYE2B_chr7_102645319_102667625 | 102648345 | C | CGTGTGTG others(1): Show |
upstream_gene_variant | MODIFIER | HG01175.hp1 HG03491.hp1 |
a0001a0010 | a0001c0001a0010c0021 | a0001c0001t0014a0010c0021t0007 | a0001c0001t0014g0084 a0010c0021t0007g0037 |
2 | 128 | 0.0156 | 8 | c.-24 others(19): Show |
SPDYE2B | ENSG00000173678.15 | transcript | ENST00000507450.6 | protein_coding | 1973 | chr7 | TogoVar | |||||||
SPDYE2B_chr7_102645319_102667625 | 102654716 | C | CAACAACA others(1): Show |
intron_variant | MODIFIER | HG02451.hp2 HG02970.hp1 HG03139.hp1 others(2): Show |
a0001a0007 | a0001c0001a0007c0010 | a0001c0001t0010a0001c0001t0011a0001c0001t0018others(2): Show | a0001c0001t0010g0101 a0001c0001t0011g0069 a0001c0001t0018g0016 others(2): Show |
5 | 128 | 0.0391 | 8 | c.380 others(23): Show |
SPDYE2B | ENSG00000173678.15 | transcript | ENST00000507450.6 | protein_coding | 3/8 | chr7 | TogoVar | |||||||
SPDYE2B_chr7_102645319_102667625 | 102664310 | C | CTTTTTTT others(1): Show |
downstream_gene_variant | MODIFIER | HG02897.hp2 HG04115.hp2 NA18747.hp2 others(2): Show |
a0001a0003a0004 | a0001c0001a0003c0003a0003c0004others(1): Show | a0001c0001t0001a0003c0003t0004a0003c0003t0028others(2): Show | a0001c0001t0001g0097 a0003c0003t0004g0091 a0003c0003t0028g0100 others(2): Show |
5 | 128 | 0.0391 | 8 | c.*32 others(19): Show |
SPDYE2B | ENSG00000173678.15 | transcript | ENST00000507450.6 | protein_coding | 1686 | chr7 | TogoVar | |||||||
SPDYE2B_chr7_102645319_102667625 | 102665054 | C | CCTTTCTT others(1): Show |
downstream_gene_variant | MODIFIER | HG01081.hp1 HG01167.hp1 HG01167.hp2 others(13): Show |
a0001a0004a0007others(2): Show | a0001c0001a0001c0005a0001c0013others(4): Show | a0001c0001t0003a0001c0005t0003a0001c0013t0023others(4): Show | a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0079 others(12): Show |
16 | 128 | 0.1250 | 8 | c.*39 others(19): Show |
SPDYE2B | ENSG00000173678.15 | transcript | ENST00000507450.6 | protein_coding | 2430 | chr7 | TogoVar | |||||||
SPDYE2_chr7_102546226_102568538 | 102547832 | G | GGAAAGAA others(1): Show |
upstream_gene_variant | MODIFIER | HG00642.hp1 HG02145.hp1 HG03098.hp2 others(2): Show |
a0001a0019a0027 | a0001c0001a0019c0023a0027c0026 | a0001c0001t0001a0019c0023t0003a0027c0026t0003 | a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0055 others(2): Show |
5 | 164 | 0.0305 | 8 | c.-38 others(19): Show |
SPDYE2 | ENSG00000205238.12 | transcript | ENST00000691607.2 | protein_coding | 3393 | chr7 | TogoVar | |||||||
SPDYE2_chr7_102546226_102568538 | 102549251 | C | CGTGTGTG others(1): Show |
upstream_gene_variant | MODIFIER | HG01257.hp1 HG01258.hp1 HG01346.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0006 | a0001c0001t0001a0001c0001t0021a0002c0006t0006 | a0001c0001t0001g0005 a0001c0001t0001g0017 a0001c0001t0001g0058 others(3): Show |
6 | 164 | 0.0366 | 8 | c.-24 others(19): Show |
SPDYE2 | ENSG00000205238.12 | transcript | ENST00000691607.2 | protein_coding | 1974 | chr7 | TogoVar | |||||||
SPDYE2_chr7_102546226_102568538 | 102555633 | C | CAACAACA others(1): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02071.hp1 HG02451.hp2 others(3): Show |
a0001a0002a0018others(1): Show | a0001c0001a0001c0025a0002c0008others(2): Show | a0001c0001t0017a0001c0025t0018a0002c0008t0008others(2): Show | a0001c0001t0017g0140 a0001c0025t0018g0103 a0002c0008t0008g0127 others(3): Show |
6 | 164 | 0.0366 | 8 | c.380 others(23): Show |
SPDYE2 | ENSG00000205238.12 | transcript | ENST00000691607.2 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SPDYE3_chr7_100302702_100327196 | 100318887 | G | GTTATTTA others(1): Show |
intron_variant | MODIFIER | HG01192.hp1 HG01496.hp2 HG01884.hp2 others(14): Show |
a0001a0006 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0007others(1): Show | a0001c0001t0001g0004 a0001c0001t0001g0062 a0001c0001t0001g0077 others(6): Show |
17 | 344 | 0.0494 | 8 | c.134 others(25): Show |
SPDYE3 | ENSG00000214300.7 | transcript | ENST00000332397.6 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SPDYE8_chr7_73014719_73034766 | 73023161 | G | GATAAATA others(1): Show |
intron_variant | MODIFIER | HG01261.hp1 HG01496.hp1 HG03239.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0009a0002c0002t0001a0002c0002t0007others(1): Show | a0001c0001t0009g0107 a0002c0002t0001g0025 a0002c0002t0001g0026 others(2): Show |
5 | 138 | 0.0362 | 8 | c.495 others(23): Show |
SPDYE8 | ENSG00000273520.6 | transcript | ENST00000333385.11 | protein_coding | 5/7 | chr7 | TogoVar | |||||||
SPDYE8_chr7_73014719_73034766 | 73033668 | A | ATGTGTGT others(1): Show |
upstream_gene_variant | MODIFIER | HG00140.hp2 HG02080.hp2 HG02129.hp1 others(4): Show |
a0001a0016 | a0001c0001a0016c0011 | a0001c0001t0001a0001c0001t0007a0016c0011t0001 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0021 others(3): Show |
7 | 138 | 0.0507 | 8 | c.-44 others(19): Show |
SPDYE8 | ENSG00000273520.6 | transcript | ENST00000333385.11 | protein_coding | 3903 | chr7 | TogoVar | |||||||
SPDYE9_chr7_73070972_73091038 | 73089940 | A | ATGTGTGT others(1): Show |
upstream_gene_variant | MODIFIER | HG01099.hp2 HG01891.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0011 | a0001c0001t0001g0122 a0001c0001t0011g0021 |
2 | 164 | 0.0122 | 8 | c.-44 others(19): Show |
SPDYE9 | ENSG00000262461.7 | transcript | ENST00000575125.6 | protein_coding | 3903 | chr7 | TogoVar | |||||||
SPECC1L_chr22_24265831_24422738 | 24270252 | T | TACATACA others(1): Show |
upstream_gene_variant | MODIFIER | HG03654.hp2 HG03834.hp2 HG04115.hp2 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0032 a0001c0001t0004g0033 a0001c0001t0004g0036 |
3 | 326 | 0.0092 | 8 | c.-87 others(17): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 578 | chr22 | TogoVar | |||||||
SPECC1L_chr22_24265831_24422738 | 24303844 | G | GGTGTGTG others(1): Show |
intron_variant | MODIFIER | HG02738.hp1 HG02895.hp2 NA19068.hp2 |
a0001a0007 | a0001c0001a0007c0006 | a0001c0001t0001a0001c0001t0013a0007c0006t0020 | a0001c0001t0001g0002 a0001c0001t0013g0281 a0007c0006t0020g0069 |
3 | 326 | 0.0092 | 8 | c.153 others(25): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 3/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SPECC1L_chr22_24265831_24422738 | 24316274 | T | TTTTATTT others(1): Show |
intron_variant | MODIFIER | HG00438.hp1 HG02080.hp1 HG02572.hp2 others(24): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0015a0001c0001t0016others(2): Show | a0001c0001t0004g0014 a0001c0001t0004g0015 a0001c0001t0004g0016 others(24): Show |
27 | 326 | 0.0828 | 8 | c.307 others(25): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 4/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SPECC1L_chr22_24265831_24422738 | 24325538 | G | GATTTATT others(1): Show |
intron_variant | MODIFIER | HG02080.hp2 HG02572.hp2 HG02717.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0015 | a0001c0001t0001g0002 a0001c0001t0001g0048 a0001c0001t0001g0223 others(4): Show |
7 | 326 | 0.0215 | 8 | c.214 others(27): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 6/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SPECC1L_chr22_24265831_24422738 | 24355426 | C | CCTGTCTG others(1): Show |
intron_variant | MODIFIER | HG00438.hp1 HG02080.hp1 HG02572.hp2 others(26): Show |
a0001a0007 | a0001c0001a0007c0006 | a0001c0001t0004a0001c0001t0015a0001c0001t0016others(4): Show | a0001c0001t0004g0014 a0001c0001t0004g0015 a0001c0001t0004g0016 others(26): Show |
29 | 326 | 0.0890 | 8 | c.274 others(27): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 11/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SPECC1L_chr22_24265831_24422738 | 24390860 | T | TTTTTTTT others(1): Show |
intron_variant | MODIFIER | HG00323.hp2 HG00544.hp1 HG00673.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0006a0001c0002t0002 | a0001c0001t0003g0044 a0001c0001t0003g0148 a0001c0001t0003g0154 others(10): Show |
13 | 326 | 0.0399 | 8 | c.308 others(29): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 14/16 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20015584 | A | ATTTTTTT others(1): Show |
intron_variant | MODIFIER | HG00099.hp2 HG02258.hp2 HG02451.hp1 others(12): Show |
a0001a0002a0003 | a0001c0003a0001c0006a0002c0002others(1): Show | a0001c0003t0007a0001c0003t0012a0001c0003t0017others(7): Show | a0001c0003t0007g0057 a0001c0003t0007g0059 a0001c0003t0007g0062 others(12): Show |
15 | 250 | 0.0600 | 8 | c.-22 others(25): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar |