Joint Open Genome and Omics Platform (JoGo)

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view	regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
	ZNF641_chr12_48332180_48355919	48332473	T T	TCCACCTC others(92): Show TCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCC CCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCCGACCCCC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02976.hp2 NA18906.hp1 HG02572.hp1 HG02976.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0041 a0001c0001t0018 a0001c0001t0041	a0001c0001t0018g0022 a0001c0001t0041g0065 a0001c0001t0018g0022 a0001c0001t0041g0065	3	408	0.0074	99	c.10 others(112): Show c.10499_*10500insGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCC GTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCC GTCCGGGAGGGAGGTGG		ZNF641	ENSG00000167528.13	transcript	ENST00000547026.6	protein_coding					4706		chr12	TogoVar
	ZNF641_chr12_48332180_48355919	48332499	T T	TGGCCGGG others(92): Show TGGCCGGGCGGGGGGCCGACCCCCCCACCTCCCTCCCGGACGGGGCGGCT GGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19058.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	408	0.0025	99	c.10 others(112): Show c.10473_*10474insCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGG TCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGT CGGCCCCCCGCCCGGCC		ZNF641	ENSG00000167528.13	transcript	ENST00000547026.6	protein_coding					4680		chr12	TogoVar
	ZNF681_chr19_23734195_23763891	23761901	A A	ATTCTTTC others(92): Show ATTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTC TCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0218 a0002c0002t0009g0218	1	394	0.0025	99	c.-31 others(110): Show c.-3153_-3152insGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAAAGAGAGAGAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAA GAAAGAAAGAAAGAA		ZNF681	ENSG00000196172.9	transcript	ENST00000402377.3	protein_coding					3011		chr19	TogoVar
	ZNF804B_chr7_88754700_89343528	88877056	T T	TTTTTTGA others(92): Show TTTTTTGAAAAAAAAAATATATATATATAATATATATATATATATATATA ATATATATATATATATATATAATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0004 a0004	a0004c0008 a0004c0008	a0004c0008t0006 a0004c0008t0006	a0004c0008t0006g0114 a0004c0008t0006g0114	1	166	0.0060	99	c.108 others(120): Show c.108+116977_108+116978insGAAAAAAAAAATATATATATATAA TATATATATATATATATATAATATATATATATATATATATAATATATATA TATATATATATATATATATATTTTT		ZNF804B	ENSG00000182348.7	transcript	ENST00000333190.5	protein_coding	1/3					INFO_REALIGN_3_PRIME	chr7	TogoVar
	ZNF862_chr7_149833375_149872479	149858875	A A	ATGGGCCA others(92): Show ATGGGCCAGCTGTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTGGGG GCAGAGGGGCACACGCATGGGCCAGCTGTGGGGGCAGAGGGGCACACGCG	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA19005.hp2 NA18962.hp2 NA19005.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0297 a0002c0003t0001g0334 a0002c0003t0001g0297 a0002c0003t0001g0334	2	412	0.0049	99	c.111 others(116): Show c.1118-515_1118-514insGTGGGCCAGCTGTGGGGGCAGAGGGGCA CACGCATGGGCCAGCTGTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTG TGGGGGCAGAGGGGCACACGC		ZNF862	ENSG00000106479.11	transcript	ENST00000223210.5	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr7	TogoVar
	ZNF862_chr7_149833375_149872479	149858875	A A	ATGGGCCA others(92): Show ATGGGCCAGCTGTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTGGGG GCAGAGGGGCACACGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACACGCG	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02040.hp1 HG02922.hp2 others(10): Show HG00621.hp2 HG02040.hp1 HG02922.hp2 NA18954.hp1 NA18956.hp1 NA18959.hp1 NA18984.hp1 NA19010.hp2 NA19011.hp1 NA19054.hp2 NA19079.hp2 NA19091.hp1 NA21309.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0004 a0002c0003 a0005c0011 a0001c0004 a0002c0003 a0005c0011	a0001c0004t0007 a0002c0003t0003 a0005c0011t0022 a0001c0004t0007 a0002c0003t0003 a0005c0011t0022	a0001c0004t0007g0043 a0001c0004t0007g0191 a0001c0004t0007g0206 others(8): Show a0001c0004t0007g0043 a0001c0004t0007g0191 a0001c0004t0007g0206 a0001c0004t0007g0230 a0001c0004t0007g0245 a0001c0004t0007g0254 a0001c0004t0007g0258 a0002c0003t0003g0050 a0002c0003t0003g0304 a0005c0011t0022g0267 a0005c0011t0022g0268	13	412	0.0316	99	c.111 others(116): Show c.1118-515_1118-514insGTGGGCCAGCTGTGGGGGCAGAGGGGCA CACGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTG TGGGGGCAGAGGGGCACACGC		ZNF862	ENSG00000106479.11	transcript	ENST00000223210.5	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr7	TogoVar
	ZNF862_chr7_149833375_149872479	149858908	A A	ATGGGCCA others(92): Show ATGGGCCAGCTGTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTGGGG GCAGAGGGGCACACGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACACGCG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01361.hp1 HG01943.hp2 others(4): Show HG00099.hp1 HG01361.hp1 HG01943.hp2 HG02015.hp1 NA18964.hp2 NA18972.hp2 NA18992.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0002 a0001c0002t0001 a0001c0002t0003 others(2): Show a0001c0001t0002 a0001c0002t0001 a0001c0002t0003 a0002c0003t0001 a0002c0003t0003	a0001c0001t0002g0103 a0001c0001t0002g0158 a0001c0002t0001g0168 others(4): Show a0001c0001t0002g0103 a0001c0001t0002g0158 a0001c0002t0001g0168 a0001c0002t0003g0178 a0002c0003t0001g0154 a0002c0003t0003g0288 a0002c0003t0003g0289	7	412	0.0170	99	c.111 others(116): Show c.1118-432_1118-334dupGGCAGAGGGGCACACGCGTGGGCCAGCT GTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTGGGGGCAGAGGGGCA CACGCGTGGGCCAGCTGTGGG		ZNF862	ENSG00000106479.11	transcript	ENST00000223210.5	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr7	TogoVar
	ZNF862_chr7_149833375_149872479	149859070	C C	CGCGTGGG others(92): Show CGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTG GGGGCAGAGGGGCACACGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0016 a0002c0016	a0002c0016t0017 a0002c0016t0017	a0002c0016t0017g0270 a0002c0016t0017g0270	1	412	0.0024	99	c.111 others(116): Show c.1118-334_1118-333insGGCAGAGGGGCACACGCGTGGGCCAGCT GTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTGGGGGCAGAGGGGCA CATGCGTGGGCCAGCTGTGGG		ZNF862	ENSG00000106479.11	transcript	ENST00000223210.5	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr7	TogoVar
	ZNF862_chr7_149833375_149872479	149859070	C C	CGCGTGGG others(92): Show CGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTG GGGGCAGAGGGGCACACGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACGT	intron_variant intron_variant	MODIFIER	NA18990.hp2 NA18990.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0311 a0002c0003t0003g0311	1	412	0.0024	99	c.111 others(116): Show c.1118-334_1118-333insGGCAGAGGGGCACACGCGTGGGCCAGCT GTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTGGGGGCAGAGGGGCA CGTGCGTGGGCCAGCTGTGGG		ZNF862	ENSG00000106479.11	transcript	ENST00000223210.5	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr7	TogoVar
	ZNF862_chr7_149833375_149872479	149859070	C C	CGCGTGGG others(92): Show CGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACACGCGTGGGCCAGCTGTG GGGGCAGAGGGGCACGTGCGTGGGCCAGCTGTGGGGGCAGAGGGGCACGT	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01257.hp2 HG01258.hp2 HG00280.hp2 HG01257.hp2 HG01258.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0003 a0002c0003t0003 a0001c0002t0003 a0002c0003t0003	a0001c0002t0003g0032 a0002c0003t0003g0332 a0001c0002t0003g0032 a0002c0003t0003g0332	3	412	0.0073	99	c.111 others(116): Show c.1118-334_1118-333insGGCAGAGGGGCACACGCGTGGGCCAGCT GTGGGGGCAGAGGGGCACGTGCGTGGGCCAGCTGTGGGGGCAGAGGGGCA CGTGCGTGGGCCAGCTGTGGG		ZNF862	ENSG00000106479.11	transcript	ENST00000223210.5	protein_coding	5/7					INFO_REALIGN_3_PRIME	chr7	TogoVar
	ZYG11A_chr1_52837760_52899998	52869965	C C	CCCCCCAA others(92): Show CCCCCCAACACCTCCCTCCCGGACGGGGCTGCTGGCTGGGTGGGGGGCTG ACCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCTGA	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02622.hp2 HG02717.hp2 others(5): Show HG02280.hp2 HG02622.hp2 HG02717.hp2 HG02922.hp1 HG03098.hp2 HG03486.hp1 HG06807.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0018 a0001c0001 a0001c0014 a0001c0018	a0001c0001t0002 a0001c0001t0005 a0001c0001t0019 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0019 a0001c0014t0005 a0001c0018t0004	a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0005g0016 others(5): Show a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0005g0016 a0001c0001t0005g0020 a0001c0001t0005g0022 a0001c0001t0019g0033 a0001c0014t0005g0017 a0001c0018t0004g0137	8	290	0.0276	99	c.154 others(118): Show c.1542+2193_1542+2194insAACACCTCCCTCCCGGACGGGGCTGC TGGCTGGGTGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGGCT GGCCGGGCGGGGGGCTGACCCCC		ZYG11A	ENSG00000203995.11	transcript	ENST00000371528.2	protein_coding	8/13					INFO_REALIGN_3_PRIME	chr1	TogoVar
	ZYG11A_chr1_52837760_52899998	52869965	C C	CCCCCCAA others(92): Show CCCCCCAACACCTCCCTCCCGGACGGGGCTGCTGGCTGGGTGGGGGGCTG ACCCCCCCACCTCCCTCCTGGATGGGGCGGCTGGCCGGGCGGGGGGCTGA	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02572.hp1 HG02886.hp1 others(1): Show HG02559.hp2 HG02572.hp1 HG02886.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0014 a0001c0001t0005g0015 a0001c0001t0005g0018 others(1): Show a0001c0001t0005g0014 a0001c0001t0005g0015 a0001c0001t0005g0018 a0001c0001t0005g0019	4	290	0.0138	99	c.154 others(118): Show c.1542+2193_1542+2194insAACACCTCCCTCCCGGACGGGGCTGC TGGCTGGGTGGGGGGCTGACCCCCCCACCTCCCTCCTGGATGGGGCGGCT GGCCGGGCGGGGGGCTGACCCCC		ZYG11A	ENSG00000203995.11	transcript	ENST00000371528.2	protein_coding	8/13					INFO_REALIGN_3_PRIME	chr1	TogoVar
	ZYG11A_chr1_52837760_52899998	52869966	C C	CCCCCAAC others(92): Show CCCCCAACACCTCCCTCCCGGACGGGGCTGCTGGCTGGGTGGGGGGCTGA CCCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCTGAT	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00639.hp1 HG00738.hp1 others(29): Show HG00099.hp1 HG00639.hp1 HG00738.hp1 HG00741.hp2 HG01106.hp1 HG01167.hp2 HG01175.hp1 HG01192.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp1 HG01433.hp1 HG01515.hp2 HG02056.hp2 HG02280.hp1 HG02602.hp1 HG02698.hp1 HG02723.hp2 HG02809.hp1 HG03017.hp2 HG03195.hp1 HG03239.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03710.hp1 HG03831.hp2 HG04184.hp1 HG04199.hp1 NA18995.hp2 NA19030.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0009	a0001c0001t0001g0021 a0001c0001t0001g0257 a0001c0001t0001g0258 others(29): Show a0001c0001t0001g0021 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0265 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0279 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0002g0264 a0001c0001t0002g0266 a0001c0001t0002g0271 a0001c0001t0002g0275 a0001c0001t0008g0280 a0001c0001t0009g0263	32	290	0.1103	99	c.154 others(118): Show c.1542+2193_1542+2194insAACACCTCCCTCCCGGACGGGGCTGC TGGCTGGGTGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGGCT GGCCGGGCGGGGGGCTGATCCCC		ZYG11A	ENSG00000203995.11	transcript	ENST00000371528.2	protein_coding	8/13					INFO_REALIGN_3_PRIME	chr1	TogoVar
	ZYG11A_chr1_52837760_52899998	52869967	C C	CCCCAACA others(92): Show CCCCAACACCTCCCTCCCGGACGGGGCTGCTGGCTGGGTGGGGGGCTGAC CCCCCCACCTCCCTCCTGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACT	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02630.hp2 HG02818.hp2 others(1): Show HG01884.hp1 HG02630.hp2 HG02818.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0002g0140 others(1): Show a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0002g0140 a0001c0001t0002g0141	4	290	0.0138	99	c.154 others(118): Show c.1542+2193_1542+2194insAACACCTCCCTCCCGGACGGGGCTGC TGGCTGGGTGGGGGGCTGACCCCCCCACCTCCCTCCTGGACGGGGCGGCT GGCCGGGCGGGGGGCTGACTCCC		ZYG11A	ENSG00000203995.11	transcript	ENST00000371528.2	protein_coding	8/13					INFO_REALIGN_3_PRIME	chr1	TogoVar