JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYLK4_chr6_2658637_2755922	0/0	a0005	388	1	0	1	0	0	0	copy fasta	MYLK4	chr6	2658637	2755922
MYLK_chr3_123605049_123889332	0/1	a0001	1914	42	7	14	12	2	6	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0002	1913	17	0	1	13	0	3	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0003	1914	9	8	1	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0004	1914	9	8	1	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0005	1914	5	5	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0006	1914	5	3	2	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0007	1914	5	4	1	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0008	1914	4	3	0	1	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0009	1914	4	0	4	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0010	1914	3	3	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0011	1914	3	0	3	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0012	1914	3	3	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0013	1914	3	3	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0014	1914	3	0	0	0	2	1	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0015	1914	2	2	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0016	1914	2	0	0	1	0	1	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0017	1914	2	0	1	0	0	1	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0018	1914	2	2	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0019	1913	2	0	0	2	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0020	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0021	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0022	1913	1	0	0	1	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0023	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0024	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0025	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0026	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0027	1914	1	0	0	0	0	1	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0028	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0029	1913	1	0	0	1	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0030	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0031	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0032	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0033	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0034	1913	1	0	0	1	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0035	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0036	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0037	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0038	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	1/0	a0039	1914	1	0	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0040	1914	1	0	0	1	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0041	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0042	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0043	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0044	1914	1	1	0	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0045	1914	1	0	0	1	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0046	1913	1	0	0	1	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0047	1914	1	0	1	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0048	1914	1	0	1	0	0	0	copy fasta	MYLK	chr3	123605049	123889332
MYLK_chr3_123605049_123889332	0/0	a0049	1914	1	0	0	1	0	0	copy fasta	MYLK	chr3	123605049	123889332