Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ADAMTS17_chr15_99966437_100346975	0/0	t0014	3045	3	2	0	0	1	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0015	3046	3	2	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0016	3046	3	3	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0017	3043	3	3	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0018	3045	2	0	0	2	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0019	3045	2	0	0	0	1	1	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0020	3043	2	2	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0021	3042	2	0	2	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0022	3042	2	0	0	2	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0023	3044	2	2	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0024	3046	2	2	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0025	3046	2	2	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0026	3041	1	0	0	0	0	1	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0027	3041	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0028	3041	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0029	3045	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0030	3045	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0031	3045	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0032	3045	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0033	3045	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0034	3045	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0035	3045	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0036	3045	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0037	3045	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0038	3045	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0039	3045	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0040	3042	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0041	3042	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0042	3056	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0043	3054	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0044	3042	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0045	3042	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0046	3042	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	1/0	t0047	3042	1	0	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0048	3042	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0049	3042	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0050	3042	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0051	3042	1	0	0	0	0	1	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0052	3042	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0053	3028	1	1	0	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0054	3042	1	0	0	0	0	1	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0055	3046	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0056	3046	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0057	3046	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0058	3050	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0059	3046	1	0	0	0	0	1	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0060	3046	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0061	3046	1	0	1	0	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0062	3046	1	0	0	1	0	0	copy fasta	ADAMTS17	chr15	99966437	100346975
ADAMTS17_chr15_99966437_100346975	0/0	t0063	3046	1	0	0	0	0	1	copy fasta	ADAMTS17	chr15	99966437	100346975