Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF770_chr15_34973341_34993287	0/0	t0020	3360	1	1	0	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0021	3361	1	1	0	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0022	3361	1	1	0	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0023	3362	1	1	0	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0024	3363	1	0	0	0	0	1	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0025	3364	1	0	0	1	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0026	3396	1	0	0	1	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0027	3361	1	1	0	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0028	3362	1	0	1	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0029	3362	1	0	0	1	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0030	3361	1	0	0	1	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0031	3363	1	0	0	1	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0032	3362	1	1	0	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0033	3363	1	0	1	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0034	3362	1	1	0	0	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0035	3364	1	0	0	0	0	1	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0036	3364	1	0	0	1	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0037	3364	1	0	0	0	0	1	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0038	3364	1	0	0	1	0	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0039	3364	1	0	0	0	0	1	copy fasta	ZNF770	chr15	34973341	34993287
ZNF770_chr15_34973341_34993287	0/0	t0040	3364	1	0	0	0	1	0	copy fasta	ZNF770	chr15	34973341	34993287
ZNF771_chr16_30402606_30424414	1/0	t0001	1116	142	71	22	14	7	27	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0002	1111	123	3	29	75	4	12	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/1	t0003	1118	44	4	13	20	2	4	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0004	1116	6	0	4	0	1	1	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0005	1111	4	0	4	0	0	0	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0006	1103	3	0	1	0	0	2	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0007	1116	1	0	1	0	0	0	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0008	1111	1	0	0	1	0	0	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0009	1111	1	0	0	1	0	0	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0010	1111	1	0	0	1	0	0	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0011	1111	1	0	0	1	0	0	copy fasta	ZNF771	chr16	30402606	30424414
ZNF771_chr16_30402606_30424414	0/0	t0012	1111	1	0	0	1	0	0	copy fasta	ZNF771	chr16	30402606	30424414
ZNF772_chr19_57464586_57482566	0/1	t0001	3940	131	21	20	76	1	12	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0002	3941	72	10	26	25	3	8	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	1/0	t0003	3946	66	15	8	33	3	6	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0004	3941	51	10	6	26	2	7	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0005	3941	7	6	1	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0006	3941	7	0	0	3	0	4	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0007	3941	6	6	0	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0008	3940	6	0	0	6	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0009	3941	5	5	0	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0010	3941	4	0	3	0	1	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0011	3941	4	0	2	2	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0012	3941	3	3	0	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0013	3941	3	3	0	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0014	3941	3	3	0	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0015	3941	2	2	0	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0016	3941	2	0	2	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566
ZNF772_chr19_57464586_57482566	0/0	t0017	3941	2	2	0	0	0	0	copy fasta	ZNF772	chr19	57464586	57482566