Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ZNF8_chr19_58273955_58307791	0/0	t0071	7383	1	0	1	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0072	7383	1	0	0	1	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0073	7382	1	0	0	1	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0074	7384	1	0	0	1	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0075	7383	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0076	7385	1	0	1	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0077	7382	1	0	0	1	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0078	7381	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0079	7382	1	0	0	0	0	1	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0080	7383	1	0	0	0	0	1	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0081	7382	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0082	7381	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0083	7382	1	0	0	0	0	1	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0084	7381	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0085	7381	1	0	0	0	0	1	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0086	7382	1	0	1	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0087	7382	1	0	0	0	0	1	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0088	7382	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0089	7382	1	0	0	0	0	1	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0090	7382	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0091	7382	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0092	7382	1	0	0	1	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0093	7382	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0094	7384	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0095	7382	1	0	0	0	0	1	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0096	7382	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0097	7381	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0098	7382	1	1	0	0	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF8_chr19_58273955_58307791	0/0	t0099	7382	1	0	0	1	0	0	copy fasta	ZNF8	chr19	58273955	58307791
ZNF90_chr19_20073000_20126165	1/1	t0001	1939	173	12	45	74	13	27	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0002	1939	133	13	14	99	0	7	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0003	1940	41	38	3	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0004	1939	12	9	0	0	1	2	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0005	1939	7	7	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0006	1939	6	0	3	0	0	3	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0007	1940	4	4	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0008	1939	3	3	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0009	1938	3	1	1	1	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0010	1939	2	1	1	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0011	1939	2	0	0	2	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0012	1939	1	1	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0013	1939	1	0	0	1	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0014	1939	1	1	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0015	1940	1	1	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0016	1938	1	1	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0017	1938	1	0	0	1	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0018	1938	1	0	0	1	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0019	1939	1	0	0	0	0	1	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0020	1939	1	1	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165
ZNF90_chr19_20073000_20126165	0/0	t0021	1939	1	1	0	0	0	0	copy fasta	ZNF90	chr19	20073000	20126165