Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	90780
ensemblid	ENSG00000163348.4
hgncid	30257
symbol	PYGO2
name	pygopus family PHD finger 2
refseq_nuc	NM_138300.4
refseq_prot	NP_612157.1
ensembl_nuc	ENST00000368457.3
ensembl_prot	ENSP00000357442.2
mane_status	MANE Select
chr	chr1
start	154957026
end	154961782
strand	-
ver	v1.2
region	chr1:154957026-154961782
region5000	chr1:154952026-154966782
regionname0	PYGO2_chr1_154957026_154961782
regionname5000	PYGO2_chr1_154952026_154966782

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	406	296	90	56	112	10	26	80	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0002	0/0	406	3	0	0	3	0	0	1	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0003	0/0	406	1	1	0	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0004	0/0	406	1	1	0	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0005	0/0	406	1	0	0	1	0	0	1	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1221	287	89	55	107	10	24	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0002	0/0	1221	3	0	0	3	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0003	0/0	1221	3	0	0	3	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0004	0/0	1221	2	0	0	0	0	2	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0005	0/0	1221	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0006	0/0	1221	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0007	0/0	1221	1	0	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0008	0/0	1221	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0009	0/0	1221	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0010	0/0	1221	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
c0011	0/0	1221	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	1960	263	71	46	112	9	23	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0002	0/0	1960	18	17	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0003	0/0	1960	9	0	6	0	1	2	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0004	0/0	1960	2	0	2	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0005	0/0	1960	1	0	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0006	0/0	1960	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0007	0/0	1960	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0008	0/0	1960	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0009	0/0	1960	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0010	0/0	1960	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0011	0/0	1960	1	0	0	0	0	1	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0012	0/0	1960	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0013	0/0	1960	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
t0014	0/0	1960	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	211	42	43	94	9	21	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0002	0/0	15	14	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0003	0/0	8	8	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0004	0/0	7	4	1	2	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0005	0/0	6	0	3	0	1	2	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0006	0/0	5	0	0	5	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0007	0/0	5	5	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0008	0/0	3	1	1	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0009	0/0	3	0	3	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0010	0/0	3	0	0	3	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0011	0/0	3	3	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0012	0/0	2	0	2	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0013	0/0	2	0	0	0	0	2	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0014	0/0	2	2	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0015	0/0	1	0	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0016	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0017	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0018	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0019	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0020	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0021	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0022	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0023	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0024	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0025	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0026	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0027	0/0	1	0	0	0	0	1	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0028	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0029	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0030	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0031	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0032	0/0	1	0	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0033	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0034	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0035	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0036	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0037	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0038	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0039	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0040	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
g0041	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1221	287	89	55	107	10	24	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0002	0/0	1221	3	0	0	3	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0004	0/0	1221	2	0	0	0	0	2	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0005	0/0	1221	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0007	0/0	1221	1	0	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0009	0/0	1221	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0010	0/0	1221	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0002c0003	0/0	1221	3	0	0	3	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0003c0008	0/0	1221	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0004c0011	0/0	1221	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0005c0006	0/0	1221	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	3180	251	68	46	105	9	21	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0002	0/0	3180	18	17	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0003	0/0	3180	9	0	6	0	1	2	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0004	0/0	3180	2	0	2	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0006	0/0	3180	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0007	0/0	3180	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0008	0/0	3180	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0009	0/0	3180	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0010	0/0	3180	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0011	0/0	3180	1	0	0	0	0	1	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0001t0012	0/0	3180	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0002t0001	0/0	3180	3	0	0	3	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0004t0001	0/0	3180	2	0	0	0	0	2	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0005t0001	0/0	3180	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0007t0005	0/0	3180	1	0	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0009t0001	0/0	3180	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0001c0010t0001	0/0	3180	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0002c0003t0001	0/0	3180	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0002c0003t0013	0/0	3180	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0002c0003t0014	0/0	3180	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0003c0008t0001	0/0	3180	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0004c0011t0001	0/0	3180	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782
a0005c0006t0001	0/0	3180	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	copy fasta	chr1	154952026	154966782

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/1	211	42	43	94	9	21	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0003	0/0	8	8	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0004	0/0	7	4	1	2	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0006	0/0	5	0	0	5	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0007	0/0	5	5	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0008	0/0	3	1	1	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0011	0/0	3	3	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0014	0/0	2	2	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0018	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0032	0/0	1	0	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0033	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0035	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0036	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0001g0037	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0002g0002	0/0	15	14	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0002g0017	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0002g0019	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0002g0034	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0003g0005	0/0	6	0	3	0	1	2	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0003g0009	0/0	3	0	3	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0004g0012	0/0	2	0	2	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0006g0022	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0007g0023	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0008g0024	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0009g0025	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0010g0026	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0011g0027	0/0	1	0	0	0	0	1	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0001t0012g0039	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0002t0001g0010	0/0	3	0	0	3	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0004t0001g0013	0/0	2	0	0	0	0	2	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0005t0001g0016	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0007t0005g0015	0/0	1	0	1	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0009t0001g0028	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0001c0010t0001g0029	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0002c0003t0001g0038	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0002c0003t0013g0040	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0002c0003t0014g0041	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0003c0008t0001g0021	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0004c0011t0001g0030	0/0	1	1	0	0	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
a0005c0006t0001g0020	0/0	1	0	0	1	0	0	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0003	g0005	EUR	GBR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00544	hp1	a0002	c0003	t0013	g0040	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00597	hp1	a0002	c0003	t0014	g0041	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00639	hp2	a0001	c0001	t0003	g0005	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00673	hp2	a0001	c0001	t0001	g0006	EAS	CHS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01069	hp1	a0001	c0001	t0001	g0008	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01069	hp2	a0001	c0001	t0003	g0009	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01071	hp2	a0001	c0001	t0003	g0009	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01099	hp2	a0001	c0001	t0003	g0005	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01106	hp1	a0001	c0001	t0004	g0012	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01109	hp1	a0001	c0001	t0002	g0002	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01167	hp1	a0001	c0001	t0003	g0005	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01167	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01243	hp1	a0001	c0001	t0001	g0032	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01496	hp2	a0001	c0001	t0003	g0009	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01891	hp1	a0001	c0001	t0001	g0004	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01891	hp2	a0001	c0001	t0001	g0004	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01975	hp2	a0001	c0001	t0001	g0004	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02004	hp2	a0001	c0001	t0004	g0012	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02055	hp1	a0001	c0001	t0002	g0002	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02071	hp2	a0001	c0001	t0001	g0036	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02083	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02129	hp1	a0001	c0005	t0001	g0016	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02132	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02145	hp1	a0001	c0001	t0001	g0003	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02165	hp1	a0001	c0001	t0001	g0018	EAS	CDX	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02257	hp1	a0004	c0011	t0001	g0030	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02258	hp2	a0001	c0001	t0001	g0011	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02273	hp1	a0001	c0007	t0005	g0015	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02647	hp2	a0001	c0001	t0002	g0002	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02683	hp2	a0001	c0004	t0001	g0013	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02717	hp1	a0001	c0001	t0002	g0002	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02717	hp2	a0001	c0001	t0002	g0002	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02735	hp1	a0001	c0001	t0003	g0005	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02809	hp1	a0001	c0001	t0002	g0002	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02809	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02818	hp1	a0001	c0001	t0001	g0014	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02818	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02886	hp2	a0001	c0001	t0002	g0002	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02895	hp2	a0001	c0001	t0002	g0002	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02896	hp2	a0001	c0001	t0001	g0003	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02897	hp1	a0001	c0001	t0001	g0003	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02922	hp1	a0001	c0001	t0002	g0002	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02965	hp1	a0001	c0001	t0001	g0007	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02965	hp2	a0001	c0001	t0002	g0019	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02970	hp1	a0001	c0001	t0001	g0003	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02976	hp1	a0001	c0001	t0001	g0008	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02976	hp2	a0001	c0001	t0001	g0011	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03041	hp2	a0001	c0001	t0001	g0011	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03130	hp1	a0001	c0001	t0001	g0003	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03130	hp2	a0001	c0001	t0001	g0007	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03139	hp1	a0001	c0001	t0001	g0003	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03195	hp2	a0001	c0001	t0010	g0026	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03209	hp1	a0001	c0001	t0002	g0002	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03209	hp2	a0001	c0001	t0001	g0001	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03225	hp1	a0003	c0008	t0001	g0021	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03225	hp2	a0001	c0001	t0008	g0024	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03453	hp1	a0001	c0001	t0002	g0002	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03453	hp2	a0001	c0001	t0001	g0031	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03486	hp1	a0001	c0001	t0006	g0022	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03516	hp1	a0001	c0001	t0002	g0002	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03540	hp2	a0001	c0001	t0001	g0003	AFR	GWD	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03579	hp1	a0001	c0001	t0001	g0004	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03579	hp2	a0001	c0010	t0001	g0029	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03688	hp1	a0001	c0001	t0011	g0027	SAS	STU	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03834	hp2	a0001	c0001	t0001	g0001	SAS	BEB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03942	hp2	a0001	c0004	t0001	g0013	SAS	BEB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG04184	hp2	a0001	c0001	t0003	g0005	SAS	BEB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18522	hp2	a0001	c0001	t0002	g0002	AFR	YRI	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18906	hp2	a0001	c0001	t0001	g0007	AFR	YRI	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18950	hp2	a0001	c0001	t0001	g0006	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18954	hp2	a0001	c0009	t0001	g0028	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18956	hp2	a0001	c0001	t0001	g0033	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18972	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18972	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18975	hp1	a0001	c0002	t0001	g0010	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18975	hp2	a0001	c0001	t0001	g0008	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18984	hp1	a0001	c0001	t0009	g0025	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19011	hp2	a0005	c0006	t0001	g0020	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19030	hp2	a0001	c0001	t0002	g0034	AFR	LWK	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19043	hp2	a0001	c0001	t0002	g0002	AFR	LWK	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19054	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19054	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19060	hp1	a0001	c0002	t0001	g0010	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19066	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19068	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19070	hp1	a0001	c0001	t0007	g0023	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19075	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19080	hp1	a0001	c0001	t0001	g0006	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19081	hp2	a0002	c0003	t0001	g0038	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19084	hp1	a0001	c0002	t0001	g0010	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19086	hp1	a0001	c0001	t0001	g0006	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19086	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19089	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19090	hp1	a0001	c0001	t0001	g0006	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA20129	hp2	a0001	c0001	t0001	g0014	AFR	ASW	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02109	hp2	a0001	c0001	t0001	g0007	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02486	hp1	a0001	c0001	t0001	g0037	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02486	hp2	a0001	c0001	t0001	g0035	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02559	hp1	a0001	c0001	t0001	g0004	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG02559	hp2	a0001	c0001	t0001	g0003	AFR	ACB	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03471	hp1	a0001	c0001	t0012	g0039	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG03471	hp2	a0001	c0001	t0002	g0017	AFR	MSL	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG06807	hp1	a0001	c0001	t0001	g0007	AFR	USA	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18955	hp1	a0001	c0001	t0001	g0004	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA18955	hp2	a0001	c0001	t0001	g0004	EAS	JPT	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA20300	hp1	a0001	c0001	t0002	g0002	AFR	USA	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	PYGO2_chr1_154952026_154966782	PYGO2	chr1	154952026	154966782

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:154959281	T T	A A	1	a0002 a0002	3	HG00544.hp1 HG00597.hp1 NA19081.hp2 HG00544.hp1 HG00597.hp1 NA19081.hp2	missense_variant	MODERATE	c.719A>T c.719A>T	p.Asn240Ile p.Asn240Ile	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	925/3180	719/1221	240/406	chr1	154959281
chr1:154959549	C C	G G	1	a0003 a0003	1	HG03225.hp1 HG03225.hp1	missense_variant	MODERATE	c.451G>C c.451G>C	p.Gly151Arg p.Gly151Arg	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	657/3180	451/1221	151/406	chr1	154959549
chr1:154959624	G G	A A	1	a0004 a0004	1	HG02257.hp1 HG02257.hp1	missense_variant	MODERATE	c.376C>T c.376C>T	p.Pro126Ser p.Pro126Ser	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	582/3180	376/1221	126/406	chr1	154959624
chr1:154959797	A A	G G	1	a0005 a0005	1	NA19011.hp2 NA19011.hp2	missense_variant	MODERATE	c.203T>C c.203T>C	p.Met68Thr p.Met68Thr	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	409/3180	203/1221	68/406	chr1	154959797

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:154958986	G G	A A	1	a0001c0009 a0001c0009	1	NA18954.hp2 NA18954.hp2	synonymous_variant	LOW	c.1014C>T c.1014C>T	p.Asn338Asn p.Asn338Asn	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	1220/3180	1014/1221	338/406	chr1	154958986
chr1:154959127	G G	A A	1	a0001c0010 a0001c0010	1	HG03579.hp2 HG03579.hp2	synonymous_variant	LOW	c.873C>T c.873C>T	p.Phe291Phe p.Phe291Phe	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	1079/3180	873/1221	291/406	chr1	154959127
chr1:154959448	C C	T T	1	a0001c0002 a0001c0002	3	NA18975.hp1 NA19060.hp1 NA19084.hp1 NA18975.hp1 NA19060.hp1 NA19084.hp1	synonymous_variant	LOW	c.552G>A c.552G>A	p.Pro184Pro p.Pro184Pro	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	758/3180	552/1221	184/406	chr1	154959448
chr1:154959604	C C	T T	1	a0001c0007 a0001c0007	1	HG02273.hp1 HG02273.hp1	synonymous_variant	LOW	c.396G>A c.396G>A	p.Gln132Gln p.Gln132Gln	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	602/3180	396/1221	132/406	chr1	154959604
chr1:154959697	G G	A A	1	a0001c0004 a0001c0004	2	HG02683.hp2 HG03942.hp2 HG02683.hp2 HG03942.hp2	synonymous_variant	LOW	c.303C>T c.303C>T	p.Phe101Phe p.Phe101Phe	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	509/3180	303/1221	101/406	chr1	154959697
chr1:154961517	C C	T T	1	a0001c0005 a0001c0005	1	HG02129.hp1 HG02129.hp1	synonymous_variant	LOW	c.60G>A c.60G>A	p.Pro20Pro p.Pro20Pro	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	1/3	266/3180	60/1221	20/406	chr1	154961517

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:154957128	G G	A A	2	a0001c0001t0002 a0001c0001t0010 a0001c0001t0002 a0001c0001t0010	19	HG01109.hp1 HG02055.hp1 HG02647.hp2 others(16): Show HG01109.hp1 HG02055.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG02965.hp2 HG03195.hp2 HG03209.hp1 HG03453.hp1 HG03471.hp2 HG03516.hp1 NA18522.hp2 NA19030.hp2 NA19043.hp2 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.1651C>T c.1651C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	1651	chr1	154957128
chr1:154957594	T T	G G	1	a0001c0001t0008 a0001c0001t0008	1	HG03225.hp2 HG03225.hp2	3_prime_UTR_variant	MODIFIER	c.1185A>C c.1185A>C	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	1185	chr1	154957594
chr1:154957760	G G	A A	1	a0001c0001t0009 a0001c0001t0009	1	NA18984.hp1 NA18984.hp1	3_prime_UTR_variant	MODIFIER	c.1019C>T c.1019C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	1019	chr1	154957760
chr1:154957812	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG03195.hp2 HG03195.hp2	3_prime_UTR_variant	MODIFIER	c.967C>T c.967C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	967	chr1	154957812
chr1:154957827	T T	C C	1	a0001c0001t0003 a0001c0001t0003	9	HG00099.hp1 HG00639.hp2 HG01069.hp2 others(6): Show HG00099.hp1 HG00639.hp2 HG01069.hp2 HG01071.hp2 HG01099.hp2 HG01167.hp1 HG01496.hp2 HG02735.hp1 HG04184.hp2	3_prime_UTR_variant	MODIFIER	c.952A>G c.952A>G	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	952	chr1	154957827
chr1:154957926	C C	T T	1	a0001c0001t0007 a0001c0001t0007	1	NA19070.hp1 NA19070.hp1	3_prime_UTR_variant	MODIFIER	c.853G>A c.853G>A	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	853	chr1	154957926
chr1:154957927	A A	T T	1	a0001c0001t0006 a0001c0001t0006	1	HG03486.hp1 HG03486.hp1	3_prime_UTR_variant	MODIFIER	c.852T>A c.852T>A	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	852	chr1	154957927
chr1:154958231	G G	A A	1	a0001c0001t0011 a0001c0001t0011	1	HG03688.hp1 HG03688.hp1	3_prime_UTR_variant	MODIFIER	c.548C>T c.548C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	548	chr1	154958231
chr1:154958731	G G	A A	1	a0001c0001t0004 a0001c0001t0004	2	HG01106.hp1 HG02004.hp2 HG01106.hp1 HG02004.hp2	3_prime_UTR_variant	MODIFIER	c.48C>T c.48C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	3/3	48	chr1	154958731
chr1:154961582	G G	T T	1	a0001c0007t0005 a0001c0007t0005	1	HG02273.hp1 HG02273.hp1	5_prime_UTR_variant	MODIFIER	c.-6C>A c.-6C>A	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	1/3	6	chr1	154961582
chr1:154961649	G G	A A	1	a0001c0001t0012 a0001c0001t0012	1	HG03471.hp1 HG03471.hp1	5_prime_UTR_variant	MODIFIER	c.-73C>T c.-73C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	1/3	73	chr1	154961649
chr1:154961669	G G	A A	1	a0002c0003t0013 a0002c0003t0013	1	HG00544.hp1 HG00544.hp1	5_prime_UTR_variant	MODIFIER	c.-93C>T c.-93C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	1/3	93	chr1	154961669
chr1:154961698	G G	A A	1	a0002c0003t0014 a0002c0003t0014	1	HG00597.hp1 HG00597.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-122C>T c.-122C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	1/3		chr1	154961698

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr1:154959943	T T	A A	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.154-97A>T c.154-97A>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154959943
chr1:154959997	G G	A A	3	a0001c0001t0001g0011 a0001c0001t0001g0037 a0001c0001t0012g0039 a0001c0001t0001g0011 a0001c0001t0001g0037 a0001c0001t0012g0039	5	HG02258.hp2 HG02486.hp1 HG02976.hp2 others(2): Show HG02258.hp2 HG02486.hp1 HG02976.hp2 HG03041.hp2 HG03471.hp1	intron_variant	MODIFIER	c.154-151C>T c.154-151C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154959997
chr1:154960122	G G	A A	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG01243.hp1 HG01243.hp1	intron_variant	MODIFIER	c.154-276C>T c.154-276C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154960122
chr1:154960138	G G	A A	1	a0001c0001t0001g0033 a0001c0001t0001g0033	1	NA18956.hp2 NA18956.hp2	intron_variant	MODIFIER	c.154-292C>T c.154-292C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154960138
chr1:154960172	G G	A A	2	a0001c0001t0001g0003 a0001c0001t0001g0035 a0001c0001t0001g0003 a0001c0001t0001g0035	9	HG02145.hp1 HG02486.hp2 HG02559.hp2 others(6): Show HG02145.hp1 HG02486.hp2 HG02559.hp2 HG02896.hp2 HG02897.hp1 HG02970.hp1 HG03130.hp1 HG03139.hp1 HG03540.hp2	intron_variant	MODIFIER	c.154-326C>T c.154-326C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154960172
chr1:154960264	C C	CA CA	5	a0001c0001t0001g0004 a0001c0001t0001g0035 a0001c0001t0001g0037 others(2): Show a0001c0001t0001g0004 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0002g0034 a0001c0002t0001g0010	13	HG01891.hp1 HG01891.hp2 HG01975.hp2 others(10): Show HG01891.hp1 HG01891.hp2 HG01975.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG03579.hp1 NA18955.hp1 NA18955.hp2 NA18975.hp1 NA19030.hp2 NA19060.hp1 NA19084.hp1	intron_variant	MODIFIER	c.154-419dupT c.154-419dupT	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154960264
chr1:154960264	CA CA	C C	2	a0001c0001t0001g0007 a0001c0001t0002g0019 a0001c0001t0001g0007 a0001c0001t0002g0019	6	HG02109.hp2 HG02965.hp1 HG02965.hp2 others(3): Show HG02109.hp2 HG02965.hp1 HG02965.hp2 HG03130.hp2 HG06807.hp1 NA18906.hp2	intron_variant	MODIFIER	c.154-419delT c.154-419delT	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154960264
chr1:154960303	A A	G G	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	HG02165.hp1 HG02165.hp1	intron_variant	MODIFIER	c.154-457T>C c.154-457T>C	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154960303
chr1:154960439	GA GA	G G	3	a0001c0001t0001g0008 a0001c0001t0002g0017 a0001c0001t0003g0009 a0001c0001t0001g0008 a0001c0001t0002g0017 a0001c0001t0003g0009	7	HG01069.hp1 HG01069.hp2 HG01071.hp2 others(4): Show HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01496.hp2 HG02976.hp1 HG03471.hp2 NA18975.hp2	intron_variant	MODIFIER	c.153+537delT c.153+537delT	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154960439
chr1:154960900	G G	C C	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG02071.hp2 HG02071.hp2	intron_variant	MODIFIER	c.153+77C>G c.153+77C>G	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	2/2	chr1	154960900
chr1:154961229	G G	A A	1	a0001c0001t0001g0006 a0001c0001t0001g0006	5	HG00673.hp2 NA18950.hp2 NA19080.hp1 others(2): Show HG00673.hp2 NA18950.hp2 NA19080.hp1 NA19086.hp1 NA19090.hp1	intron_variant	MODIFIER	c.104-203C>T c.104-203C>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	1/2	chr1	154961229
chr1:154961231	T T	C C	5	a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0014 others(2): Show a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0037 a0001c0001t0012g0039	12	HG02109.hp2 HG02258.hp2 HG02486.hp1 others(9): Show HG02109.hp2 HG02258.hp2 HG02486.hp1 HG02818.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp2 HG03471.hp1 HG06807.hp1 NA18906.hp2 NA20129.hp2	intron_variant	MODIFIER	c.104-205A>G c.104-205A>G	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	1/2	chr1	154961231
chr1:154961372	T T	A A	2	a0002c0003t0001g0038 a0002c0003t0014g0041 a0002c0003t0001g0038 a0002c0003t0014g0041	2	HG00597.hp1 NA19081.hp2 HG00597.hp1 NA19081.hp2	intron_variant	MODIFIER	c.103+102A>T c.103+102A>T	PYGO2	ENSG00000163348.4	transcript	ENST00000368457.3	protein_coding	1/2	chr1	154961372

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🧬 JoGo Online Haplotype Explorer PYGO2_chr1_154952026_154966782

JoGo Local Haplotype Explorer (on iGV) PYGO2_chr1_154952026_154966782

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 5)

CCoding Level Haplotype Info (Total: 11)

TTranscript Level Haplotype Info (Total: 14)

GGenebody Level Haplotype Info (Total: 41)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 11)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 23)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 41)

Haplotype Details by Sample (Haploid Level) (Total: 302)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 4)

CCoding Level Variants (Synonymous Mutations) (Total: 6)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 13)

GGenebody Level Haplotype Variants (Intron) (Total: 13)

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Annotation (Repeats)

Annotation (SNP Array)