JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	844
ensemblid	ENSG00000143318.13
hgncid	1512
symbol	CASQ1
name	calsequestrin 1
refseq_nuc	NM_001231.5
refseq_prot	NP_001222.3
ensembl_nuc	ENST00000368078.8
ensembl_prot	ENSP00000357057.3
mane_status	MANE Select
chr	chr1
start	160190575
end	160201886
strand	+
ver	v1.2
region	chr1:160190575-160201886
region5000	chr1:160185575-160206886
regionname0	CASQ1_chr1_160190575_160201886
regionname5000	CASQ1_chr1_160185575_160206886

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	396	425	90	81	193	14	45	156	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0002	0/0	396	5	3	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0003	0/0	396	4	4	0	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0004	0/0	390	1	0	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0005	0/0	346	1	0	0	1	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0006	0/0	396	1	0	0	1	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0007	0/0	396	1	0	0	0	0	1	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0008	0/0	396	1	0	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0009	0/0	396	1	1	0	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1191	420	85	81	193	14	45	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0002	0/0	1191	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0003	0/0	1191	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0004	0/0	1191	3	2	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0005	0/0	1191	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0006	0/0	1191	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0007	0/0	1191	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0008	0/0	1191	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0009	0/0	1191	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0010	0/0	1191	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0011	0/0	1191	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
c0012	0/0	1191	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	688	417	79	81	195	14	46	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
t0002	0/0	688	10	8	2	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
t0003	0/0	688	5	5	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
t0004	0/0	688	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
t0005	0/0	688	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
t0006	0/0	688	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
t0007	0/0	688	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
t0008	0/0	688	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
t0009	0/0	688	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	60	1	18	26	1	14	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0002	0/1	60	2	14	35	4	4	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0003	0/0	30	0	7	12	2	9	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0004	0/0	17	0	3	13	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0005	0/0	15	0	0	15	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0006	0/0	14	14	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0007	0/0	13	0	4	6	0	3	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0008	0/0	8	8	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0009	0/0	8	1	5	0	0	2	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0010	0/0	8	1	0	7	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0011	0/0	7	0	0	7	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0012	0/0	7	0	1	6	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0013	0/0	5	0	5	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0014	1/0	5	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0015	0/0	5	0	0	5	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0016	0/0	5	0	2	0	2	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0017	0/0	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0018	0/0	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0019	0/0	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0020	0/0	4	0	0	4	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0021	0/0	3	0	0	3	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0022	0/0	3	0	1	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0023	0/0	3	0	1	0	2	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0024	0/0	3	0	0	3	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0025	0/0	3	0	0	3	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0026	0/0	3	0	0	3	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0027	0/0	3	3	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0028	0/0	3	3	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0029	0/0	3	3	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0030	0/0	3	3	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0031	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0032	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0033	0/0	2	0	1	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0034	0/0	2	0	0	0	0	2	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0035	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0036	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0037	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0038	0/0	2	0	2	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0039	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0040	0/0	2	1	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0041	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0042	0/0	2	0	0	0	2	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0043	0/0	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0044	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0045	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0046	0/0	2	0	1	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0047	0/0	2	0	1	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0048	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0049	0/0	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0050	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0051	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0052	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0053	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0054	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0055	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0056	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0057	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0058	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0059	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0060	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0061	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0062	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0063	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0064	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0065	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0066	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0067	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0068	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0069	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0070	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0071	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0072	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0073	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0074	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0075	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0076	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0077	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0078	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0079	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0080	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0081	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0082	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0083	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0084	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0085	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0086	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0087	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0088	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0089	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0090	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0091	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0092	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0093	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0094	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0095	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0096	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0097	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0098	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0099	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0100	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0101	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0102	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0103	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0104	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0105	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0106	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0107	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0108	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0109	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0110	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0111	0/0	1	0	0	0	1	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0112	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0113	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0114	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0115	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0116	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0117	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0118	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0119	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0120	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0121	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0122	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0123	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0124	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0125	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0126	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0127	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0128	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0129	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0130	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0131	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0132	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0133	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0134	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0135	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
g0136	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1191	420	85	81	193	14	45	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0002	0/0	1191	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0010	0/0	1191	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0002c0004	0/0	1191	3	2	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0002c0005	0/0	1191	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0003c0003	0/0	1191	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0004c0006	0/0	1191	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0005c0011	0/0	1191	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0006c0012	0/0	1191	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0007c0009	0/0	1191	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0008c0008	0/0	1191	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0009c0007	0/0	1191	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1878	406	73	80	192	14	45	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0001t0002	0/0	1878	5	5	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0001t0003	0/0	1878	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0001t0004	0/0	1878	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0001t0005	0/0	1878	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0001t0006	0/0	1878	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0001t0007	0/0	1878	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0001t0008	0/0	1878	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0001t0009	0/0	1878	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0002t0001	0/0	1878	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0001c0010t0001	0/0	1878	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0002c0004t0002	0/0	1878	3	2	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0002c0005t0002	0/0	1878	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0003c0003t0003	0/0	1878	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0004c0006t0001	0/0	1878	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0005c0011t0001	0/0	1878	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0006c0012t0001	0/0	1878	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0007c0009t0001	0/0	1878	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0008c0008t0001	0/0	1878	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886
a0009c0007t0001	0/0	1878	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	copy fasta	chr1	160185575	160206886

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	60	1	18	26	1	14	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0002	0/1	60	2	14	35	4	4	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0003	0/0	29	0	7	11	2	9	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0004	0/0	17	0	3	13	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0005	0/0	15	0	0	15	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0006	0/0	14	14	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0007	0/0	12	0	4	5	0	3	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0008	0/0	7	7	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0009	0/0	8	1	5	0	0	2	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0010	0/0	8	1	0	7	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0011	0/0	7	0	0	7	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0012	0/0	7	0	1	6	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0013	0/0	5	0	5	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0014	1/0	5	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0015	0/0	5	0	0	5	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0016	0/0	5	0	2	0	2	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0017	0/0	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0018	0/0	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0019	0/0	4	4	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0020	0/0	4	0	0	4	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0021	0/0	3	0	0	3	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0022	0/0	3	0	1	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0023	0/0	3	0	1	0	2	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0024	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0025	0/0	3	0	0	3	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0026	0/0	3	0	0	3	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0028	0/0	3	3	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0029	0/0	3	3	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0031	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0032	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0033	0/0	2	0	1	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0034	0/0	2	0	0	0	0	2	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0035	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0036	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0037	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0038	0/0	2	0	2	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0039	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0040	0/0	2	1	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0042	0/0	2	0	0	0	2	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0043	0/0	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0044	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0045	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0046	0/0	2	0	1	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0047	0/0	2	0	1	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0051	0/0	2	0	0	2	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0052	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0054	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0055	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0056	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0057	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0058	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0060	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0061	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0062	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0063	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0064	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0065	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0066	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0067	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0068	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0069	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0071	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0072	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0073	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0074	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0075	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0076	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0077	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0078	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0080	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0081	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0082	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0083	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0084	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0085	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0086	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0087	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0090	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0091	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0092	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0093	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0094	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0095	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0096	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0097	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0100	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0101	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0102	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0103	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0104	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0105	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0106	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0107	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0108	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0109	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0110	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0111	0/0	1	0	0	0	1	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0113	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0114	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0115	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0118	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0120	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0121	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0123	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0124	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0125	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0128	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0130	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0131	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0132	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0133	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0134	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0135	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0001g0136	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0002g0008	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0002g0027	0/0	3	3	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0002g0099	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0003g0098	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0004g0050	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0004g0127	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0005g0048	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0006g0122	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0007g0024	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0008g0050	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0001t0009g0053	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0002t0001g0041	0/0	2	2	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0002t0001g0088	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0002t0001g0089	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0001c0010t0001g0059	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0002c0004t0002g0116	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0002c0004t0002g0117	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0002c0004t0002g0119	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0002c0005t0002g0049	0/0	2	1	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0003c0003t0003g0030	0/0	3	3	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0003c0003t0003g0129	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0004c0006t0001g0007	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0005c0011t0001g0003	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0006c0012t0001g0079	0/0	1	0	0	1	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0007c0009t0001g0070	0/0	1	0	0	0	0	1	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0008c0008t0001g0112	0/0	1	0	1	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
a0009c0007t0001g0126	0/0	1	1	0	0	0	0	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00099	hp2	a0001	c0001	t0001	g0002	EUR	GBR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00140	hp1	a0001	c0001	t0001	g0002	EUR	GBR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00140	hp2	a0001	c0001	t0001	g0016	EUR	GBR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00280	hp1	a0001	c0001	t0001	g0003	EUR	FIN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00280	hp2	a0001	c0001	t0001	g0016	EUR	FIN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00408	hp1	a0001	c0001	t0001	g0068	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00408	hp2	a0001	c0001	t0001	g0002	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00423	hp1	a0001	c0001	t0001	g0021	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00423	hp2	a0001	c0001	t0001	g0002	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00438	hp1	a0001	c0001	t0001	g0134	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00438	hp2	a0001	c0001	t0001	g0004	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00558	hp1	a0004	c0006	t0001	g0007	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00558	hp2	a0001	c0001	t0001	g0022	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00597	hp1	a0001	c0001	t0001	g0004	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00597	hp2	a0001	c0001	t0001	g0021	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00609	hp1	a0001	c0001	t0001	g0011	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00609	hp2	a0001	c0001	t0001	g0015	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00639	hp1	a0001	c0001	t0001	g0069	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00642	hp1	a0001	c0001	t0001	g0060	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00642	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00673	hp2	a0001	c0001	t0001	g0007	EAS	CHS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00733	hp1	a0001	c0001	t0001	g0047	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00733	hp2	a0001	c0001	t0001	g0023	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00735	hp2	a0001	c0001	t0001	g0007	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00738	hp2	a0001	c0001	t0001	g0033	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00741	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG00741	hp2	a0002	c0004	t0002	g0119	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01069	hp1	a0001	c0001	t0001	g0016	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01069	hp2	a0001	c0001	t0001	g0038	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01070	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01071	hp2	a0001	c0001	t0001	g0016	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01074	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01074	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01081	hp1	a0001	c0001	t0001	g0009	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01099	hp1	a0001	c0001	t0001	g0004	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01099	hp2	a0001	c0001	t0001	g0092	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01106	hp1	a0001	c0001	t0001	g0009	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01106	hp2	a0001	c0001	t0004	g0127	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01109	hp2	a0002	c0005	t0002	g0049	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01167	hp1	a0001	c0001	t0001	g0078	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01167	hp2	a0001	c0001	t0001	g0007	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01168	hp1	a0001	c0001	t0001	g0046	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01169	hp1	a0001	c0001	t0001	g0007	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01175	hp1	a0001	c0001	t0001	g0009	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01175	hp2	a0001	c0001	t0001	g0002	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01192	hp1	a0001	c0001	t0001	g0067	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01192	hp2	a0008	c0008	t0001	g0112	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01243	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01243	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01255	hp1	a0001	c0001	t0001	g0004	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01255	hp2	a0001	c0001	t0001	g0093	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01257	hp1	a0001	c0001	t0001	g0038	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01257	hp2	a0001	c0001	t0001	g0009	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01258	hp1	a0001	c0001	t0001	g0009	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01258	hp2	a0001	c0001	t0001	g0012	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01261	hp1	a0001	c0001	t0001	g0136	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01261	hp2	a0001	c0001	t0001	g0003	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01346	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01346	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01358	hp1	a0001	c0001	t0001	g0003	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01358	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01361	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01361	hp2	a0001	c0001	t0001	g0085	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01433	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01515	hp1	a0001	c0001	t0001	g0002	EUR	IBS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01515	hp2	a0001	c0001	t0001	g0023	EUR	IBS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01516	hp1	a0001	c0001	t0001	g0002	EUR	IBS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01516	hp2	a0001	c0001	t0001	g0042	EUR	IBS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01517	hp1	a0001	c0001	t0001	g0042	EUR	IBS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01517	hp2	a0001	c0001	t0001	g0023	EUR	IBS	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01884	hp1	a0001	c0001	t0001	g0101	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01884	hp2	a0001	c0001	t0001	g0014	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01891	hp1	a0001	c0001	t0002	g0027	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01891	hp2	a0001	c0001	t0009	g0053	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01928	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01928	hp2	a0001	c0001	t0001	g0013	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01934	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01943	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01943	hp2	a0001	c0001	t0001	g0086	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01952	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01952	hp2	a0001	c0001	t0001	g0022	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01978	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01978	hp2	a0001	c0001	t0001	g0013	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01981	hp1	a0001	c0001	t0001	g0114	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01981	hp2	a0001	c0001	t0001	g0058	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01993	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02004	hp1	a0001	c0001	t0001	g0004	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02015	hp1	a0001	c0001	t0001	g0039	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02015	hp2	a0001	c0001	t0001	g0004	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02027	hp2	a0001	c0001	t0001	g0015	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02055	hp1	a0001	c0001	t0001	g0014	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02055	hp2	a0001	c0001	t0001	g0100	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02071	hp1	a0001	c0001	t0001	g0075	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02071	hp2	a0001	c0001	t0001	g0097	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02074	hp1	a0001	c0001	t0001	g0003	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02074	hp2	a0001	c0001	t0001	g0010	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02083	hp1	a0001	c0001	t0001	g0003	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02083	hp2	a0001	c0001	t0001	g0120	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02129	hp1	a0001	c0001	t0001	g0004	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02129	hp2	a0001	c0001	t0001	g0004	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02132	hp1	a0001	c0001	t0001	g0071	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02132	hp2	a0001	c0001	t0001	g0091	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02145	hp1	a0001	c0001	t0001	g0006	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02145	hp2	a0001	c0001	t0001	g0006	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02148	hp1	a0001	c0001	t0001	g0065	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02148	hp2	a0001	c0001	t0001	g0007	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02155	hp1	a0001	c0001	t0001	g0015	EAS	CDX	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02155	hp2	a0001	c0001	t0001	g0002	EAS	CDX	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02257	hp1	a0001	c0001	t0002	g0099	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02257	hp2	a0001	c0001	t0001	g0006	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02258	hp1	a0001	c0001	t0001	g0008	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02258	hp2	a0001	c0001	t0003	g0098	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02273	hp1	a0001	c0001	t0001	g0013	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02273	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02280	hp1	a0001	c0001	t0001	g0110	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02280	hp2	a0002	c0004	t0002	g0117	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02293	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02293	hp2	a0001	c0001	t0001	g0013	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02300	hp1	a0001	c0001	t0001	g0043	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02451	hp1	a0001	c0001	t0001	g0017	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02451	hp2	a0001	c0001	t0001	g0006	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02523	hp1	a0001	c0001	t0001	g0024	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02523	hp2	a0001	c0001	t0001	g0007	EAS	KHV	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02572	hp1	a0001	c0001	t0001	g0118	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02572	hp2	a0001	c0001	t0001	g0032	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02602	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02602	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02615	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02615	hp2	a0001	c0001	t0001	g0018	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02622	hp1	a0001	c0002	t0001	g0089	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02622	hp2	a0001	c0001	t0001	g0006	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02630	hp1	a0001	c0001	t0001	g0076	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02630	hp2	a0001	c0001	t0001	g0006	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02647	hp1	a0001	c0001	t0001	g0062	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02647	hp2	a0001	c0002	t0001	g0041	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02683	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02698	hp2	a0001	c0001	t0001	g0016	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02717	hp1	a0001	c0001	t0001	g0108	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02717	hp2	a0001	c0001	t0001	g0006	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02723	hp1	a0001	c0001	t0001	g0017	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02723	hp2	a0001	c0001	t0001	g0029	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02735	hp1	a0001	c0001	t0001	g0061	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02735	hp2	a0001	c0001	t0001	g0003	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02738	hp1	a0001	c0001	t0001	g0003	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02738	hp2	a0001	c0001	t0001	g0004	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02809	hp1	a0001	c0001	t0005	g0048	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02809	hp2	a0001	c0001	t0001	g0006	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02818	hp1	a0001	c0001	t0001	g0135	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02818	hp2	a0001	c0001	t0001	g0006	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02886	hp1	a0001	c0001	t0001	g0105	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02886	hp2	a0001	c0001	t0001	g0028	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02895	hp1	a0001	c0001	t0001	g0008	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02895	hp2	a0001	c0001	t0001	g0017	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02896	hp1	a0003	c0003	t0003	g0030	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02896	hp2	a0001	c0001	t0001	g0029	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02897	hp1	a0001	c0001	t0001	g0008	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02897	hp2	a0003	c0003	t0003	g0030	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02922	hp1	a0001	c0001	t0001	g0040	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02922	hp2	a0003	c0003	t0003	g0129	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02965	hp1	a0001	c0001	t0001	g0019	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02965	hp2	a0001	c0001	t0001	g0014	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02970	hp1	a0001	c0001	t0001	g0109	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02970	hp2	a0001	c0001	t0001	g0107	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02976	hp1	a0001	c0001	t0001	g0006	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02976	hp2	a0001	c0001	t0001	g0006	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03017	hp1	a0001	c0001	t0001	g0113	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03041	hp1	a0001	c0001	t0001	g0014	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03041	hp2	a0001	c0001	t0001	g0008	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03098	hp1	a0001	c0001	t0001	g0019	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03098	hp2	a0009	c0007	t0001	g0126	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03130	hp1	a0001	c0001	t0001	g0006	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03130	hp2	a0001	c0001	t0001	g0125	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03139	hp1	a0001	c0001	t0002	g0027	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03139	hp2	a0001	c0001	t0001	g0018	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03195	hp1	a0001	c0001	t0001	g0008	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03195	hp2	a0001	c0001	t0001	g0017	AFR	ESN	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03209	hp1	a0003	c0003	t0003	g0030	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03209	hp2	a0001	c0001	t0006	g0122	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03225	hp1	a0002	c0005	t0002	g0049	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03225	hp2	a0001	c0001	t0001	g0008	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03239	hp1	a0001	c0001	t0001	g0055	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03239	hp2	a0001	c0001	t0001	g0081	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03453	hp1	a0001	c0001	t0001	g0031	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03453	hp2	a0001	c0001	t0002	g0027	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03486	hp1	a0001	c0001	t0001	g0029	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03486	hp2	a0001	c0002	t0001	g0041	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03490	hp1	a0001	c0001	t0001	g0034	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03490	hp2	a0001	c0001	t0001	g0003	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03491	hp1	a0001	c0001	t0001	g0007	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03491	hp2	a0001	c0001	t0001	g0009	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03492	hp1	a0001	c0001	t0001	g0007	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03492	hp2	a0001	c0001	t0001	g0034	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03540	hp1	a0001	c0010	t0001	g0059	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03540	hp2	a0001	c0001	t0001	g0124	AFR	GWD	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03579	hp1	a0001	c0001	t0001	g0002	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03579	hp2	a0001	c0001	t0008	g0050	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03654	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03669	hp2	a0001	c0001	t0001	g0003	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03688	hp1	a0001	c0001	t0001	g0003	SAS	STU	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03688	hp2	a0007	c0009	t0001	g0070	SAS	STU	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03710	hp1	a0001	c0001	t0001	g0007	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03834	hp1	a0001	c0001	t0001	g0077	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03834	hp2	a0001	c0001	t0001	g0102	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03927	hp2	a0001	c0001	t0001	g0002	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03942	hp1	a0001	c0001	t0001	g0002	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG04115	hp1	a0001	c0001	t0001	g0003	SAS	STU	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG04115	hp2	a0001	c0001	t0001	g0001	SAS	STU	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG04184	hp2	a0001	c0001	t0001	g0003	SAS	BEB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG04204	hp1	a0001	c0001	t0001	g0009	SAS	STU	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG04204	hp2	a0001	c0001	t0001	g0047	SAS	STU	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG04228	hp1	a0001	c0001	t0001	g0106	SAS	STU	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG04228	hp2	a0001	c0001	t0001	g0115	SAS	STU	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18522	hp1	a0001	c0001	t0001	g0045	AFR	YRI	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18522	hp2	a0001	c0001	t0001	g0045	AFR	YRI	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18612	hp2	a0001	c0001	t0001	g0040	EAS	CHB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18747	hp2	a0001	c0001	t0001	g0002	EAS	CHB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18906	hp1	a0001	c0001	t0001	g0006	AFR	YRI	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18906	hp2	a0001	c0001	t0001	g0032	AFR	YRI	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18941	hp1	a0001	c0001	t0001	g0104	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18941	hp2	a0001	c0001	t0001	g0095	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18942	hp1	a0001	c0001	t0001	g0015	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18942	hp2	a0001	c0001	t0001	g0020	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18943	hp1	a0001	c0001	t0001	g0084	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18943	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18944	hp1	a0001	c0001	t0001	g0022	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18944	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18945	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18945	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18947	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18947	hp2	a0001	c0001	t0001	g0011	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18949	hp2	a0001	c0001	t0001	g0015	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18951	hp1	a0001	c0001	t0001	g0066	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18951	hp2	a0001	c0001	t0001	g0051	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18952	hp1	a0001	c0001	t0001	g0011	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18952	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18953	hp1	a0001	c0001	t0001	g0007	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18953	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18956	hp2	a0001	c0001	t0001	g0010	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18957	hp2	a0001	c0001	t0001	g0012	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18960	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18961	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18961	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18962	hp1	a0001	c0001	t0001	g0133	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18962	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18963	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18963	hp2	a0001	c0001	t0001	g0004	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18964	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18964	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18967	hp1	a0001	c0001	t0001	g0011	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18967	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18968	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18970	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18970	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18971	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18972	hp1	a0001	c0001	t0001	g0036	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18972	hp2	a0001	c0001	t0001	g0082	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18974	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18974	hp2	a0001	c0001	t0001	g0131	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18975	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18977	hp1	a0001	c0001	t0001	g0064	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18977	hp2	a0001	c0001	t0001	g0026	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18978	hp1	a0001	c0001	t0001	g0020	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18978	hp2	a0001	c0001	t0001	g0010	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18979	hp1	a0001	c0001	t0001	g0020	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18979	hp2	a0001	c0001	t0001	g0021	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18980	hp1	a0001	c0001	t0001	g0037	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18981	hp1	a0001	c0001	t0001	g0012	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18981	hp2	a0001	c0001	t0001	g0130	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18982	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18984	hp1	a0001	c0001	t0001	g0035	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18984	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18985	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18985	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18986	hp1	a0001	c0001	t0001	g0103	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18986	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18990	hp1	a0001	c0001	t0001	g0080	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18990	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18991	hp1	a0001	c0001	t0001	g0010	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18991	hp2	a0001	c0001	t0001	g0051	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18992	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18992	hp2	a0006	c0012	t0001	g0079	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18993	hp1	a0001	c0001	t0001	g0072	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18993	hp2	a0001	c0001	t0001	g0010	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18995	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18997	hp1	a0001	c0001	t0001	g0025	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18997	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18998	hp1	a0001	c0001	t0001	g0036	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18998	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18999	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA18999	hp2	a0001	c0001	t0001	g0037	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19000	hp2	a0001	c0001	t0001	g0004	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19002	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19002	hp2	a0001	c0001	t0001	g0012	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19003	hp1	a0001	c0001	t0001	g0011	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19003	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19005	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19005	hp2	a0001	c0001	t0001	g0007	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19006	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19006	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19007	hp1	a0001	c0001	t0001	g0039	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19009	hp1	a0001	c0001	t0001	g0026	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19009	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19010	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19010	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19011	hp1	a0001	c0001	t0007	g0024	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19011	hp2	a0001	c0001	t0001	g0033	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19030	hp1	a0001	c0001	t0005	g0048	AFR	LWK	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19030	hp2	a0001	c0002	t0001	g0088	AFR	LWK	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19043	hp1	a0001	c0001	t0001	g0054	AFR	LWK	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19043	hp2	a0001	c0001	t0001	g0028	AFR	LWK	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19054	hp1	a0001	c0001	t0001	g0004	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19054	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19055	hp1	a0001	c0001	t0001	g0010	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19055	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19056	hp1	a0001	c0001	t0001	g0004	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19056	hp2	a0001	c0001	t0001	g0044	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19057	hp1	a0001	c0001	t0001	g0073	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19057	hp2	a0001	c0001	t0001	g0020	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19058	hp1	a0001	c0001	t0001	g0128	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19058	hp2	a0001	c0001	t0001	g0046	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19060	hp1	a0001	c0001	t0001	g0004	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19060	hp2	a0001	c0001	t0001	g0011	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19063	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19063	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19064	hp2	a0001	c0001	t0001	g0010	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19065	hp2	a0001	c0001	t0001	g0044	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19066	hp1	a0001	c0001	t0001	g0094	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19066	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19067	hp2	a0001	c0001	t0001	g0004	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19068	hp1	a0001	c0001	t0001	g0132	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19068	hp2	a0001	c0001	t0001	g0057	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19070	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19070	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19072	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19072	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19074	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19074	hp2	a0001	c0001	t0001	g0056	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19075	hp1	a0001	c0001	t0001	g0012	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19075	hp2	a0001	c0001	t0001	g0024	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19076	hp1	a0001	c0001	t0001	g0063	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19076	hp2	a0001	c0001	t0001	g0007	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19077	hp1	a0001	c0001	t0001	g0083	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19077	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19079	hp1	a0001	c0001	t0001	g0004	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19079	hp2	a0005	c0011	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19080	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19080	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19082	hp1	a0001	c0001	t0001	g0012	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19082	hp2	a0001	c0001	t0001	g0004	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19084	hp1	a0001	c0001	t0001	g0025	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19084	hp2	a0001	c0001	t0001	g0052	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19085	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19086	hp1	a0001	c0001	t0001	g0025	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19086	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19087	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19087	hp2	a0001	c0001	t0001	g0090	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19088	hp2	a0001	c0001	t0001	g0011	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19089	hp1	a0001	c0001	t0001	g0074	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19089	hp2	a0001	c0001	t0001	g0026	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19090	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19090	hp2	a0001	c0001	t0001	g0035	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19091	hp1	a0001	c0001	t0001	g0012	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19091	hp2	a0001	c0001	t0001	g0002	EAS	JPT	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19240	hp1	a0001	c0001	t0001	g0019	AFR	YRI	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA19240	hp2	a0001	c0001	t0001	g0123	AFR	YRI	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA20129	hp2	a0001	c0001	t0001	g0009	AFR	ASW	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA20805	hp1	a0001	c0001	t0001	g0003	EUR	TSI	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA20805	hp2	a0001	c0001	t0001	g0111	EUR	TSI	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01123	hp1	a0001	c0001	t0001	g0087	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG01123	hp2	a0001	c0001	t0001	g0013	AMR	CLM	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02109	hp1	a0001	c0001	t0001	g0019	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02109	hp2	a0001	c0001	t0001	g0028	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02486	hp1	a0001	c0001	t0001	g0006	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02486	hp2	a0001	c0001	t0001	g0018	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02559	hp1	a0001	c0001	t0002	g0008	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG02559	hp2	a0001	c0001	t0001	g0043	AFR	ACB	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03471	hp1	a0001	c0001	t0004	g0050	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG03471	hp2	a0001	c0001	t0001	g0018	AFR	MSL	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG06807	hp1	a0002	c0004	t0002	g0116	AFR	USA	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
HG06807	hp2	a0001	c0001	t0001	g0121	AFR	USA	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA20300	hp1	a0001	c0001	t0001	g0008	AFR	USA	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA20300	hp2	a0001	c0001	t0001	g0010	AFR	USA	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA21309	hp1	a0001	c0001	t0001	g0096	AFR	LWK	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
NA21309	hp2	a0001	c0001	t0001	g0031	AFR	LWK	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0002	REF	REF	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0014	REF	REF	CASQ1_chr1_160185575_160206886	CASQ1	chr1	160185575	160206886

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:160190753	T T	A A	1	a0004 a0004	1	HG00558.hp1 HG00558.hp1	start_lost	HIGH	c.2T>A c.2T>A	p.Met1? p.Met1?	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/11	179/1878	2/1191	1/396	chr1	160190753
chr1:160190881	G G	A A	1	a0009 a0009	1	HG03098.hp2 HG03098.hp2	missense_variant	MODERATE	c.130G>A c.130G>A	p.Asp44Asn p.Asp44Asn	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/11	307/1878	130/1191	44/396	chr1	160190881
chr1:160190966	A A	G G	1	a0002 a0002	5	HG00741.hp2 HG01109.hp2 HG02280.hp2 others(2): Show HG00741.hp2 HG01109.hp2 HG02280.hp2 HG03225.hp1 HG06807.hp1	missense_variant	MODERATE	c.215A>G c.215A>G	p.His72Arg p.His72Arg	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/11	392/1878	215/1191	72/396	chr1	160190966
chr1:160191011	T T	C C	1	a0008 a0008	1	HG01192.hp2 HG01192.hp2	missense_variant	MODERATE	c.260T>C c.260T>C	p.Met87Thr p.Met87Thr	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/11	437/1878	260/1191	87/396	chr1	160191011
chr1:160192835	G G	A A	1	a0007 a0007	1	HG03688.hp2 HG03688.hp2	missense_variant	MODERATE	c.313G>A c.313G>A	p.Gly105Ser p.Gly105Ser	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/11	490/1878	313/1191	105/396	chr1	160192835
chr1:160193801	A A	T T	1	a0003 a0003	4	HG02896.hp1 HG02897.hp2 HG02922.hp2 others(1): Show HG02896.hp1 HG02897.hp2 HG02922.hp2 HG03209.hp1	missense_variant	MODERATE	c.419A>T c.419A>T	p.Tyr140Phe p.Tyr140Phe	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/11	596/1878	419/1191	140/396	chr1	160193801
chr1:160198686	A A	G G	1	a0006 a0006	1	NA18992.hp2 NA18992.hp2	missense_variant	MODERATE	c.838A>G c.838A>G	p.Met280Val p.Met280Val	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	8/11	1015/1878	838/1191	280/396	chr1	160198686
chr1:160199905	G G	T T	1	a0005 a0005	1	NA19079.hp2 NA19079.hp2	stop_gained	HIGH	c.1039G>T c.1039G>T	p.Gly347* p.Gly347*	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/11	1216/1878	1039/1191	347/396	chr1	160199905

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:160190778	C C	A A	1	a0001c0002 a0001c0002	4	HG02622.hp1 HG02647.hp2 HG03486.hp2 others(1): Show HG02622.hp1 HG02647.hp2 HG03486.hp2 NA19030.hp2	synonymous_variant	LOW	c.27C>A c.27C>A	p.Pro9Pro p.Pro9Pro	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/11	204/1878	27/1191	9/396	chr1	160190778
chr1:160190988	G G	A A	1	a0002c0005 a0002c0005	2	HG01109.hp2 HG03225.hp1 HG01109.hp2 HG03225.hp1	synonymous_variant	LOW	c.237G>A c.237G>A	p.Lys79Lys p.Lys79Lys	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/11	414/1878	237/1191	79/396	chr1	160190988
chr1:160201370	T T	C C	1	a0001c0010 a0001c0010	1	HG03540.hp1 HG03540.hp1	synonymous_variant	LOW	c.1185T>C c.1185T>C	p.Asp395Asp p.Asp395Asp	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	11/11	1362/1878	1185/1191	395/396	chr1	160201370

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:160190596	A A	G G	5	a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 a0002c0004t0002 a0002c0005t0002	13	HG00741.hp2 HG01109.hp2 HG01891.hp1 others(10): Show HG00741.hp2 HG01109.hp2 HG01891.hp1 HG01891.hp2 HG02257.hp1 HG02280.hp2 HG02559.hp1 HG02809.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp2 HG06807.hp1 NA19030.hp1	5_prime_UTR_variant	MODIFIER	c.-156A>G c.-156A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/11	156	chr1	160190596
chr1:160190668	T T	G G	1	a0001c0001t0006 a0001c0001t0006	1	HG03209.hp2 HG03209.hp2	5_prime_UTR_variant	MODIFIER	c.-84T>G c.-84T>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/11	84	chr1	160190668
chr1:160201466	T T	C C	1	a0001c0001t0007 a0001c0001t0007	1	NA19011.hp1 NA19011.hp1	3_prime_UTR_variant	MODIFIER	c.90T>C c.90T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	11/11	90	chr1	160201466
chr1:160201468	G G	C C	2	a0001c0001t0008 a0001c0001t0009 a0001c0001t0008 a0001c0001t0009	2	HG01891.hp2 HG03579.hp2 HG01891.hp2 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.92G>C c.92G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	11/11	92	chr1	160201468
chr1:160201476	T T	A A	1	a0001c0001t0005 a0001c0001t0005	2	HG02809.hp1 NA19030.hp1 HG02809.hp1 NA19030.hp1	3_prime_UTR_variant	MODIFIER	c.100T>A c.100T>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	11/11	100	chr1	160201476
chr1:160201581	C C	T T	3	a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009	4	HG01106.hp2 HG01891.hp2 HG03471.hp1 others(1): Show HG01106.hp2 HG01891.hp2 HG03471.hp1 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.205C>T c.205C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	11/11	205	chr1	160201581
chr1:160201708	T T	C C	1	a0001c0001t0006 a0001c0001t0006	1	HG03209.hp2 HG03209.hp2	3_prime_UTR_variant	MODIFIER	c.332T>C c.332T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	11/11	332	chr1	160201708
chr1:160201742	C C	T T	2	a0001c0001t0003 a0003c0003t0003 a0001c0001t0003 a0003c0003t0003	5	HG02258.hp2 HG02896.hp1 HG02897.hp2 others(2): Show HG02258.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp2 HG03209.hp1	3_prime_UTR_variant	MODIFIER	c.366C>T c.366C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	11/11	366	chr1	160201742

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr1:160191075	C C	T T	1	a0001c0001t0001g0136 a0001c0001t0001g0136	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.279+45C>T c.279+45C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160191075
chr1:160191158	C C	T T	10	a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0130 others(7): Show a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0003c0003t0003g0030 a0003c0003t0003g0129	16	HG00438.hp1 HG02818.hp1 HG02896.hp1 others(13): Show HG00438.hp1 HG02818.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp2 HG03209.hp1 NA18942.hp2 NA18951.hp2 NA18962.hp1 NA18974.hp2 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18991.hp2 NA19057.hp2 NA19068.hp1	intron_variant	MODIFIER	c.279+128C>T c.279+128C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160191158
chr1:160191160	G G	C C	2	a0003c0003t0003g0030 a0003c0003t0003g0129 a0003c0003t0003g0030 a0003c0003t0003g0129	4	HG02896.hp1 HG02897.hp2 HG02922.hp2 others(1): Show HG02896.hp1 HG02897.hp2 HG02922.hp2 HG03209.hp1	intron_variant	MODIFIER	c.279+130G>C c.279+130G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160191160
chr1:160191422	G G	A A	1	a0001c0001t0001g0052 a0001c0001t0001g0052	1	NA19084.hp2 NA19084.hp2	intron_variant	MODIFIER	c.279+392G>A c.279+392G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160191422
chr1:160191564	C C	T T	1	a0001c0001t0001g0128 a0001c0001t0001g0128	1	NA19058.hp1 NA19058.hp1	intron_variant	MODIFIER	c.279+534C>T c.279+534C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160191564
chr1:160191566	T T	C C	1	a0001c0001t0001g0128 a0001c0001t0001g0128	1	NA19058.hp1 NA19058.hp1	intron_variant	MODIFIER	c.279+536T>C c.279+536T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160191566
chr1:160191838	T T	TGGCCTGG others(10): Show TGGCCTGGCATTCAGATA	58	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 others(55): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0002g0027 a0001c0001t0002g0099 a0001c0001t0003g0098 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0006g0122 a0001c0001t0008g0050 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0005c0011t0001g0003 a0008c0008t0001g0112 a0009c0007t0001g0126	139	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(136): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00438.hp1 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp2 HG01074.hp1 HG01106.hp2 HG01109.hp2 HG01168.hp1 HG01192.hp2 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01884.hp1 HG01891.hp1 HG01928.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02602.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp2 HG03540.hp2 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18941.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18951.hp2 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18991.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19030.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19057.hp2 NA19058.hp2 NA19068.hp1 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20805.hp1 NA20805.hp2	intron_variant	MODIFIER	c.279+813_279+814ins others(17): Show c.279+813_279+814insGGCATTCAGATAGGCCT	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr1	160191838
chr1:160191937	C C	T T	20	a0001c0001t0001g0006 a0001c0001t0001g0015 a0001c0001t0001g0024 others(17): Show a0001c0001t0001g0006 a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0044 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0135 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0009c0007t0001g0126	45	HG00609.hp2 HG01106.hp2 HG02027.hp2 others(42): Show HG00609.hp2 HG01106.hp2 HG02027.hp2 HG02071.hp2 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02622.hp2 HG02630.hp2 HG02717.hp2 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03471.hp1 HG03486.hp1 HG03540.hp2 HG03579.hp2 NA18906.hp1 NA18941.hp2 NA18942.hp1 NA18949.hp2 NA18997.hp1 NA19011.hp1 NA19043.hp2 NA19056.hp2 NA19065.hp2 NA19075.hp2 NA19084.hp1 NA19086.hp1 NA19240.hp2 NA21309.hp1	intron_variant	MODIFIER	c.280-865C>T c.280-865C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160191937
chr1:160191953	G G	C C	5	a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0100 others(2): Show a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0100 a0001c0001t0002g0099 a0001c0001t0003g0098	9	HG02055.hp2 HG02109.hp1 HG02257.hp1 others(6): Show HG02055.hp2 HG02109.hp1 HG02257.hp1 HG02258.hp2 HG02965.hp1 HG03098.hp1 NA18522.hp1 NA18522.hp2 NA19240.hp1	intron_variant	MODIFIER	c.280-849G>C c.280-849G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160191953
chr1:160192581	C C	A A	7	a0001c0001t0001g0006 a0001c0001t0001g0028 a0001c0001t0001g0123 others(4): Show a0001c0001t0001g0006 a0001c0001t0001g0028 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0006g0122 a0009c0007t0001g0126	22	HG02109.hp2 HG02145.hp1 HG02145.hp2 others(19): Show HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02451.hp2 HG02486.hp1 HG02622.hp2 HG02630.hp2 HG02717.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03540.hp2 NA18906.hp1 NA19043.hp2 NA19240.hp2	intron_variant	MODIFIER	c.280-221C>A c.280-221C>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160192581
chr1:160192706	C C	G G	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	NA19066.hp1 NA19066.hp1	intron_variant	MODIFIER	c.280-96C>G c.280-96C>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160192706
chr1:160192717	C C	A A	1	a0001c0001t0001g0045 a0001c0001t0001g0045	2	NA18522.hp1 NA18522.hp2 NA18522.hp1 NA18522.hp2	intron_variant	MODIFIER	c.280-85C>A c.280-85C>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	1/10		chr1	160192717
chr1:160192895	G G	T T	1	a0001c0001t0001g0121 a0001c0001t0001g0121	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.364+9G>T c.364+9G>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160192895
chr1:160193082	A A	G G	42	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(39): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0120 a0001c0001t0001g0128 a0001c0002t0001g0041 a0001c0002t0001g0088 a0001c0002t0001g0089 a0004c0006t0001g0007 a0006c0012t0001g0079	153	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(150): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02071.hp1 HG02074.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02647.hp2 HG02738.hp2 HG02922.hp1 HG03239.hp2 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp1 NA18612.hp2 NA18747.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18978.hp2 NA18980.hp1 NA18981.hp1 NA18985.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19005.hp2 NA19006.hp1 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19087.hp2 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.364+196A>G c.364+196A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193082
chr1:160193100	A A	G G	1	a0001c0001t0001g0120 a0001c0001t0001g0120	1	HG02083.hp2 HG02083.hp2	intron_variant	MODIFIER	c.364+214A>G c.364+214A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193100
chr1:160193115	G G	T T	4	a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0092 others(1): Show a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0092 a0001c0001t0001g0093	6	HG01099.hp2 HG01255.hp2 HG01516.hp2 others(3): Show HG01099.hp2 HG01255.hp2 HG01516.hp2 HG01517.hp1 HG02300.hp1 HG02559.hp2	intron_variant	MODIFIER	c.364+229G>T c.364+229G>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193115
chr1:160193121	G G	A A	24	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0016 others(21): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0121 a0005c0011t0001g0003 a0008c0008t0001g0112	74	HG00140.hp2 HG00280.hp1 HG00280.hp2 others(71): Show HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp1 HG01168.hp1 HG01192.hp2 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01884.hp1 HG01928.hp1 HG01981.hp1 HG02074.hp1 HG02083.hp1 HG02280.hp1 HG02602.hp1 HG02683.hp1 HG02698.hp2 HG02717.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03490.hp2 HG03669.hp2 HG03688.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18941.hp1 NA18944.hp2 NA18945.hp1 NA18960.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18975.hp1 NA18977.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19054.hp2 NA19055.hp2 NA19058.hp2 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA20805.hp1 NA20805.hp2	intron_variant	MODIFIER	c.364+235G>A c.364+235G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193121
chr1:160193127	C C	G G	1	a0001c0001t0001g0115 a0001c0001t0001g0115	1	HG04228.hp2 HG04228.hp2	intron_variant	MODIFIER	c.364+241C>G c.364+241C>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193127
chr1:160193139	C C	G G	1	a0001c0001t0001g0091 a0001c0001t0001g0091	1	HG02132.hp2 HG02132.hp2	intron_variant	MODIFIER	c.364+253C>G c.364+253C>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193139
chr1:160193169	G G	A A	37	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(34): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0120 a0001c0001t0001g0128 a0004c0006t0001g0007 a0006c0012t0001g0079	145	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(142): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00673.hp2 HG00735.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02071.hp1 HG02074.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02738.hp2 HG02922.hp1 HG03239.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp1 NA18612.hp2 NA18747.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18978.hp2 NA18980.hp1 NA18981.hp1 NA18985.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19005.hp2 NA19006.hp1 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19054.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.364+283G>A c.364+283G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193169
chr1:160193197	C C	T T	2	a0001c0001t0001g0023 a0001c0002t0001g0041 a0001c0001t0001g0023 a0001c0002t0001g0041	5	HG00733.hp2 HG01515.hp2 HG01517.hp2 others(2): Show HG00733.hp2 HG01515.hp2 HG01517.hp2 HG02647.hp2 HG03486.hp2	intron_variant	MODIFIER	c.364+311C>T c.364+311C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193197
chr1:160193356	A A	G G	1	a0001c0001t0001g0018 a0001c0001t0001g0018	4	HG02486.hp2 HG02615.hp2 HG03139.hp2 others(1): Show HG02486.hp2 HG02615.hp2 HG03139.hp2 HG03471.hp2	intron_variant	MODIFIER	c.365-391A>G c.365-391A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193356
chr1:160193373	G G	A A	1	a0001c0001t0001g0135 a0001c0001t0001g0135	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.365-374G>A c.365-374G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193373
chr1:160193399	G G	A A	2	a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0088 a0001c0002t0001g0089	2	HG02622.hp1 NA19030.hp2 HG02622.hp1 NA19030.hp2	intron_variant	MODIFIER	c.365-348G>A c.365-348G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193399
chr1:160193399	G G	C C	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	HG02132.hp1 HG02132.hp1	intron_variant	MODIFIER	c.365-348G>C c.365-348G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193399
chr1:160193416	C C	T T	1	a0007c0009t0001g0070 a0007c0009t0001g0070	1	HG03688.hp2 HG03688.hp2	intron_variant	MODIFIER	c.365-331C>T c.365-331C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193416
chr1:160193462	T T	C C	2	a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0072 a0001c0001t0001g0073	2	NA18993.hp1 NA19057.hp1 NA18993.hp1 NA19057.hp1	intron_variant	MODIFIER	c.365-285T>C c.365-285T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193462
chr1:160193542	C C	T T	1	a0001c0002t0001g0089 a0001c0002t0001g0089	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.365-205C>T c.365-205C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193542
chr1:160193560	G G	C C	1	a0001c0001t0009g0053 a0001c0001t0009g0053	1	HG01891.hp2 HG01891.hp2	intron_variant	MODIFIER	c.365-187G>C c.365-187G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193560
chr1:160193632	T T	C C	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	NA19043.hp1 NA19043.hp1	intron_variant	MODIFIER	c.365-115T>C c.365-115T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193632
chr1:160193656	C C	T T	75	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(72): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0026 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0002t0001g0088 a0001c0002t0001g0089 a0002c0004t0002g0119 a0002c0005t0002g0049 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0008c0008t0001g0112 a0009c0007t0001g0126	234	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(231): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01928.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03225.hp1 HG03239.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp2 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.365-91C>T c.365-91C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193656
chr1:160193659	G G	C C	24	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0026 others(21): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0026 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0125 a0005c0011t0001g0003 a0008c0008t0001g0112 a0009c0007t0001g0126	70	HG00280.hp1 HG00642.hp2 HG00733.hp1 others(67): Show HG00280.hp1 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01074.hp1 HG01168.hp1 HG01192.hp2 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01928.hp1 HG01981.hp1 HG02074.hp1 HG02083.hp1 HG02280.hp1 HG02602.hp1 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03490.hp2 HG03669.hp2 HG03688.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18941.hp1 NA18944.hp2 NA18945.hp1 NA18960.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18975.hp1 NA18977.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19054.hp2 NA19055.hp2 NA19058.hp2 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA20805.hp1 NA20805.hp2	intron_variant	MODIFIER	c.365-88G>C c.365-88G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193659
chr1:160193719	C C	T T	41	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(38): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0120 a0001c0001t0001g0128 a0001c0002t0001g0088 a0001c0002t0001g0089 a0004c0006t0001g0007 a0006c0012t0001g0079	149	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(146): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00673.hp2 HG00735.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02738.hp2 HG02922.hp1 HG03239.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp1 NA18612.hp2 NA18747.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18978.hp2 NA18980.hp1 NA18981.hp1 NA18985.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19005.hp2 NA19006.hp1 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19087.hp2 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.365-28C>T c.365-28C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	2/10		chr1	160193719
chr1:160193891	C C	T T	1	a0001c0001t0001g0087 a0001c0001t0001g0087	1	HG01123.hp1 HG01123.hp1	intron_variant	MODIFIER	c.465+44C>T c.465+44C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160193891
chr1:160193953	CACATACA others(19): Show CACATACACCACACGCACACACACCAT	C C	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	HG03239.hp1 HG03239.hp1	intron_variant	MODIFIER	c.465+141_465+166del others(26): Show c.465+141_465+166delCACACGCACACACACCATACATACAC	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr1	160193953
chr1:160193992	C C	T T	2	a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0088 a0001c0002t0001g0089	2	HG02622.hp1 NA19030.hp2 HG02622.hp1 NA19030.hp2	intron_variant	MODIFIER	c.465+145C>T c.465+145C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160193992
chr1:160194025	C C	G G	41	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(38): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0120 a0001c0001t0001g0128 a0001c0002t0001g0088 a0001c0002t0001g0089 a0004c0006t0001g0007 a0006c0012t0001g0079	149	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(146): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00673.hp2 HG00735.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02738.hp2 HG02922.hp1 HG03239.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp2 HG03942.hp1 NA18612.hp2 NA18747.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18978.hp2 NA18980.hp1 NA18981.hp1 NA18985.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19005.hp2 NA19006.hp1 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19087.hp2 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.465+178C>G c.465+178C>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194025
chr1:160194026	T T	G G	42	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(39): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0022 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0102 a0001c0001t0001g0120 a0001c0001t0001g0128 a0001c0002t0001g0088 a0001c0002t0001g0089 a0004c0006t0001g0007 a0006c0012t0001g0079	150	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(147): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00673.hp2 HG00735.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02738.hp2 HG02922.hp1 HG03239.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 NA18612.hp2 NA18747.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18978.hp2 NA18980.hp1 NA18981.hp1 NA18985.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19005.hp2 NA19006.hp1 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19087.hp2 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.465+179T>G c.465+179T>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194026
chr1:160194127	T T	TACACACA others(2): Show TACACACACC	5	a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0002g0027 others(2): Show a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0002g0027 a0001c0001t0005g0048 a0001c0002t0001g0041	11	HG00733.hp2 HG01515.hp2 HG01517.hp2 others(8): Show HG00733.hp2 HG01515.hp2 HG01517.hp2 HG01891.hp1 HG02647.hp2 HG02809.hp1 HG03139.hp1 HG03453.hp2 HG03486.hp2 NA19030.hp1 NA19043.hp1	intron_variant	MODIFIER	c.465+289_465+297dup others(9): Show c.465+289_465+297dupCACACACAC	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr1	160194127
chr1:160194292	G G	A A	22	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0026 others(19): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0026 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0125 a0005c0011t0001g0003 a0008c0008t0001g0112 a0009c0007t0001g0126	68	HG00280.hp1 HG00642.hp2 HG00733.hp1 others(65): Show HG00280.hp1 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01074.hp1 HG01168.hp1 HG01192.hp2 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01928.hp1 HG02074.hp1 HG02083.hp1 HG02280.hp1 HG02602.hp1 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03490.hp2 HG03669.hp2 HG03688.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18941.hp1 NA18944.hp2 NA18945.hp1 NA18960.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18975.hp1 NA18977.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19054.hp2 NA19055.hp2 NA19058.hp2 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA20805.hp1 NA20805.hp2	intron_variant	MODIFIER	c.465+445G>A c.465+445G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194292
chr1:160194312	C C	T T	5	a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0096 others(2): Show a0001c0001t0001g0019 a0001c0001t0001g0045 a0001c0001t0001g0096 a0001c0001t0001g0100 a0001c0001t0002g0099	9	HG02055.hp2 HG02109.hp1 HG02257.hp1 others(6): Show HG02055.hp2 HG02109.hp1 HG02257.hp1 HG02965.hp1 HG03098.hp1 NA18522.hp1 NA18522.hp2 NA19240.hp1 NA21309.hp1	intron_variant	MODIFIER	c.465+465C>T c.465+465C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194312
chr1:160194318	A A	G G	4	a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0002g0027 others(1): Show a0001c0001t0001g0023 a0001c0001t0001g0054 a0001c0001t0002g0027 a0001c0001t0005g0048	9	HG00733.hp2 HG01515.hp2 HG01517.hp2 others(6): Show HG00733.hp2 HG01515.hp2 HG01517.hp2 HG01891.hp1 HG02809.hp1 HG03139.hp1 HG03453.hp2 NA19030.hp1 NA19043.hp1	intron_variant	MODIFIER	c.465+471A>G c.465+471A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194318
chr1:160194323	TAC TAC	T T	36	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0020 others(33): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0020 a0001c0001t0001g0026 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0005c0011t0001g0003 a0008c0008t0001g0112 a0009c0007t0001g0126	87	HG00280.hp1 HG00438.hp1 HG00642.hp2 others(84): Show HG00280.hp1 HG00438.hp1 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01109.hp2 HG01168.hp1 HG01192.hp2 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01928.hp1 HG01981.hp1 HG02074.hp1 HG02083.hp1 HG02280.hp1 HG02280.hp2 HG02572.hp1 HG02602.hp1 HG02683.hp1 HG02717.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03225.hp1 HG03490.hp2 HG03669.hp2 HG03688.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18941.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18951.hp2 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18991.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19054.hp2 NA19055.hp2 NA19057.hp2 NA19058.hp2 NA19068.hp1 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA20805.hp1 NA20805.hp2	intron_variant	MODIFIER	c.465+485_465+486del others(2): Show c.465+485_465+486delAC	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr1	160194323
chr1:160194327	C C	T T	3	a0001c0001t0001g0019 a0001c0001t0001g0100 a0001c0001t0003g0098 a0001c0001t0001g0019 a0001c0001t0001g0100 a0001c0001t0003g0098	6	HG02055.hp2 HG02109.hp1 HG02258.hp2 others(3): Show HG02055.hp2 HG02109.hp1 HG02258.hp2 HG02965.hp1 HG03098.hp1 NA19240.hp1	intron_variant	MODIFIER	c.465+480C>T c.465+480C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194327
chr1:160194459	C C	CA CA	129	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(126): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0010t0001g0059 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	411	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(408): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.466-553_466-552ins others(1): Show c.466-553_466-552insA	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194459
chr1:160194473	C C	CCA CCA	134	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(131): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0041 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0010t0001g0059 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	422	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(419): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.466-532_466-531dup others(2): Show c.466-532_466-531dupCA	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10	INFO_REALIGN_3_PRIME	chr1	160194473
chr1:160194529	C C	T T	1	a0001c0001t0002g0099 a0001c0001t0002g0099	1	HG02257.hp1 HG02257.hp1	intron_variant	MODIFIER	c.466-483C>T c.466-483C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194529
chr1:160194563	A A	T T	1	a0001c0001t0001g0069 a0001c0001t0001g0069	1	HG00639.hp1 HG00639.hp1	intron_variant	MODIFIER	c.466-449A>T c.466-449A>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194563
chr1:160194605	A A	T T	12	a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0118 others(9): Show a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0118 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049	17	HG00438.hp1 HG00741.hp2 HG01109.hp2 others(14): Show HG00438.hp1 HG00741.hp2 HG01109.hp2 HG02280.hp2 HG02572.hp1 HG03225.hp1 HG06807.hp1 NA18942.hp2 NA18951.hp2 NA18962.hp1 NA18974.hp2 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18991.hp2 NA19057.hp2 NA19068.hp1	intron_variant	MODIFIER	c.466-407A>T c.466-407A>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194605
chr1:160194624	C C	CAT CAT	83	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(80): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0026 a0001c0001t0001g0029 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0006g0122 a0001c0002t0001g0088 a0001c0002t0001g0089 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0008c0008t0001g0112 a0009c0007t0001g0126	252	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(249): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01928.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02896.hp2 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03486.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp2 NA18747.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp2 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.466-388_466-387ins others(2): Show c.466-388_466-387insAT	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194624
chr1:160194662	C C	T T	7	a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0130 others(4): Show a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134	11	HG00438.hp1 NA18942.hp2 NA18951.hp2 others(8): Show HG00438.hp1 NA18942.hp2 NA18951.hp2 NA18962.hp1 NA18974.hp2 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18991.hp2 NA19057.hp2 NA19068.hp1	intron_variant	MODIFIER	c.466-350C>T c.466-350C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194662
chr1:160194744	A A	T T	1	a0001c0002t0001g0088 a0001c0002t0001g0088	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.466-268A>T c.466-268A>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194744
chr1:160194818	C C	T T	1	a0001c0001t0001g0086 a0001c0001t0001g0086	1	HG01943.hp2 HG01943.hp2	intron_variant	MODIFIER	c.466-194C>T c.466-194C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194818
chr1:160194825	T T	C C	6	a0001c0001t0001g0010 a0001c0001t0001g0036 a0001c0001t0001g0074 others(3): Show a0001c0001t0001g0010 a0001c0001t0001g0036 a0001c0001t0001g0074 a0001c0001t0001g0090 a0001c0001t0001g0103 a0001c0001t0001g0128	14	HG02074.hp2 NA18956.hp2 NA18972.hp1 others(11): Show HG02074.hp2 NA18956.hp2 NA18972.hp1 NA18978.hp2 NA18986.hp1 NA18991.hp1 NA18993.hp2 NA18998.hp1 NA19055.hp1 NA19058.hp1 NA19064.hp2 NA19087.hp2 NA19089.hp1 NA20300.hp2	intron_variant	MODIFIER	c.466-187T>C c.466-187T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194825
chr1:160194878	T T	C C	139	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(136): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0002g0099 a0001c0001t0003g0098 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0041 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0010t0001g0059 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	431	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(428): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.466-134T>C c.466-134T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194878
chr1:160194884	A A	C C	1	a0001c0001t0001g0085 a0001c0001t0001g0085	1	HG01361.hp2 HG01361.hp2	intron_variant	MODIFIER	c.466-128A>C c.466-128A>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	3/10		chr1	160194884
chr1:160195305	A A	C C	30	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(27): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0055 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0101 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0120 a0001c0001t0001g0136 a0001c0001t0002g0008 a0007c0009t0001g0070 a0008c0008t0001g0112	122	HG00099.hp1 HG00140.hp2 HG00280.hp2 others(119): Show HG00099.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00544.hp1 HG00544.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01928.hp2 HG01934.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp2 HG02027.hp1 HG02083.hp2 HG02132.hp1 HG02148.hp1 HG02258.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp2 HG02486.hp2 HG02559.hp1 HG02615.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02895.hp1 HG02897.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03139.hp2 HG03195.hp1 HG03225.hp2 HG03239.hp1 HG03471.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04204.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp1 NA18949.hp1 NA18951.hp1 NA18953.hp2 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18963.hp1 NA18968.hp2 NA18971.hp1 NA18974.hp1 NA18975.hp2 NA18977.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18984.hp1 NA18995.hp2 NA19000.hp1 NA19002.hp2 NA19007.hp2 NA19011.hp2 NA19064.hp1 NA19065.hp1 NA19067.hp1 NA19075.hp1 NA19076.hp1 NA19082.hp1 NA19085.hp2 NA19088.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20805.hp2	intron_variant	MODIFIER	c.578-156A>C c.578-156A>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	4/10		chr1	160195305
chr1:160195326	C C	T T	1	a0003c0003t0003g0129 a0003c0003t0003g0129	1	HG02922.hp2 HG02922.hp2	intron_variant	MODIFIER	c.578-135C>T c.578-135C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	4/10		chr1	160195326
chr1:160195394	T T	C C	1	a0001c0001t0001g0075 a0001c0001t0001g0075	1	HG02071.hp1 HG02071.hp1	intron_variant	MODIFIER	c.578-67T>C c.578-67T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	4/10		chr1	160195394
chr1:160195412	G G	A A	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.578-49G>A c.578-49G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	4/10		chr1	160195412
chr1:160195456	C C	G G	5	a0001c0001t0001g0015 a0001c0001t0001g0025 a0001c0001t0001g0044 others(2): Show a0001c0001t0001g0015 a0001c0001t0001g0025 a0001c0001t0001g0044 a0001c0001t0001g0060 a0001c0001t0001g0096	12	HG00609.hp2 HG00642.hp1 HG02027.hp2 others(9): Show HG00609.hp2 HG00642.hp1 HG02027.hp2 HG02155.hp1 NA18942.hp1 NA18949.hp2 NA18997.hp1 NA19056.hp2 NA19065.hp2 NA19084.hp1 NA19086.hp1 NA21309.hp1	splice_region_variant&intron_variant	LOW	c.578-5C>G c.578-5C>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	4/10		chr1	160195456
chr1:160195582	G G	A A	1	a0001c0001t0001g0077 a0001c0001t0001g0077	1	HG03834.hp1 HG03834.hp1	intron_variant	MODIFIER	c.651+48G>A c.651+48G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10		chr1	160195582
chr1:160195652	G G	GC GC	41	a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0010 others(38): Show a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0028 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0107 a0001c0001t0001g0111 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0002g0099 a0006c0012t0001g0079	134	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(131): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01074.hp2 HG01099.hp2 HG01175.hp2 HG01255.hp2 HG01257.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01891.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02015.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02109.hp2 HG02132.hp2 HG02155.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02559.hp1 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02970.hp2 HG03041.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03579.hp1 HG03654.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 NA18747.hp2 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18952.hp1 NA18952.hp2 NA18956.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18980.hp1 NA18985.hp1 NA18986.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19006.hp1 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp2 NA19055.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19080.hp2 NA19088.hp2 NA19089.hp1 NA19091.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.651+129dupC c.651+129dupC	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr1	160195652
chr1:160195652	G G	GCC GCC	17	a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0001g0042 others(14): Show a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0001g0042 a0001c0001t0001g0051 a0001c0001t0001g0054 a0001c0001t0001g0058 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0130 a0001c0002t0001g0041	38	HG00423.hp1 HG00438.hp2 HG00597.hp1 others(35): Show HG00423.hp1 HG00438.hp2 HG00597.hp1 HG00597.hp2 HG01099.hp1 HG01123.hp1 HG01255.hp1 HG01516.hp2 HG01517.hp1 HG01981.hp2 HG02004.hp1 HG02015.hp2 HG02129.hp1 HG02129.hp2 HG02572.hp1 HG02630.hp1 HG02647.hp2 HG02738.hp2 HG02886.hp1 HG03130.hp2 HG03486.hp2 HG03834.hp1 HG04228.hp1 HG06807.hp2 NA18951.hp2 NA18963.hp2 NA18979.hp2 NA18981.hp2 NA18991.hp2 NA19000.hp2 NA19043.hp1 NA19054.hp1 NA19056.hp1 NA19060.hp1 NA19067.hp2 NA19079.hp1 NA19082.hp2 NA19087.hp2	intron_variant	MODIFIER	c.651+128_651+129dup others(2): Show c.651+128_651+129dupCC	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr1	160195652
chr1:160195659	C C	CA CA	12	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0026 others(9): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0026 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0061 a0001c0001t0001g0072 a0001c0001t0001g0078 a0001c0001t0001g0104 a0001c0001t0001g0114 a0005c0011t0001g0003	58	HG00280.hp1 HG00642.hp2 HG00733.hp1 others(55): Show HG00280.hp1 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01074.hp1 HG01167.hp1 HG01168.hp1 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01928.hp1 HG01981.hp1 HG02074.hp1 HG02083.hp1 HG02602.hp1 HG02683.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG03490.hp2 HG03669.hp2 HG03688.hp1 HG04115.hp1 HG04184.hp2 HG04204.hp2 NA18941.hp1 NA18944.hp2 NA18945.hp1 NA18960.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18975.hp1 NA18977.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18993.hp1 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19054.hp2 NA19055.hp2 NA19058.hp2 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA20805.hp1	intron_variant	MODIFIER	c.651+125_651+126ins others(1): Show c.651+125_651+126insA	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10		chr1	160195659
chr1:160195661	C C	T T	36	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 others(33): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0044 a0001c0001t0001g0055 a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0101 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0136 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0003c0003t0003g0030 a0003c0003t0003g0129 a0007c0009t0001g0070	133	HG00099.hp1 HG00140.hp2 HG00280.hp2 others(130): Show HG00099.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00544.hp1 HG00544.hp2 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp2 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01978.hp2 HG01993.hp2 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02132.hp1 HG02148.hp1 HG02155.hp1 HG02273.hp1 HG02280.hp1 HG02293.hp2 HG02300.hp2 HG02486.hp2 HG02523.hp1 HG02572.hp2 HG02615.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG03017.hp1 HG03017.hp2 HG03139.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04204.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp2 NA18941.hp2 NA18942.hp1 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18953.hp2 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18963.hp1 NA18968.hp2 NA18971.hp1 NA18974.hp1 NA18975.hp2 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18984.hp1 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19002.hp2 NA19007.hp2 NA19011.hp1 NA19056.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19075.hp1 NA19075.hp2 NA19082.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp1	intron_variant	MODIFIER	c.651+127C>T c.651+127C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10		chr1	160195661
chr1:160195770	TCA TCA	T T	7	a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 others(4): Show a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0044 a0001c0001t0001g0060 a0001c0001t0001g0095 a0001c0001t0007g0024	15	HG00609.hp2 HG00642.hp1 HG02027.hp2 others(12): Show HG00609.hp2 HG00642.hp1 HG02027.hp2 HG02155.hp1 HG02523.hp1 NA18941.hp2 NA18942.hp1 NA18949.hp2 NA18997.hp1 NA19011.hp1 NA19056.hp2 NA19065.hp2 NA19075.hp2 NA19084.hp1 NA19086.hp1	intron_variant	MODIFIER	c.652-124_652-123del others(2): Show c.652-124_652-123delCA	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr1	160195770
chr1:160195782	T T	A A	24	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 others(21): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0026 a0001c0001t0001g0037 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0052 a0001c0001t0001g0061 a0001c0001t0001g0072 a0001c0001t0001g0078 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0002g0008 a0005c0011t0001g0003 a0009c0007t0001g0126	77	HG00280.hp1 HG00642.hp2 HG00733.hp1 others(74): Show HG00280.hp1 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01074.hp1 HG01167.hp1 HG01168.hp1 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01928.hp1 HG01981.hp1 HG02074.hp1 HG02083.hp1 HG02258.hp1 HG02559.hp1 HG02602.hp1 HG02683.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02970.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03195.hp1 HG03225.hp2 HG03490.hp2 HG03669.hp2 HG03688.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18941.hp1 NA18944.hp2 NA18945.hp1 NA18960.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18975.hp1 NA18977.hp2 NA18980.hp1 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18993.hp1 NA18999.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19054.hp2 NA19055.hp2 NA19058.hp2 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA20300.hp1 NA20805.hp1 NA20805.hp2	intron_variant	MODIFIER	c.652-115T>A c.652-115T>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10		chr1	160195782
chr1:160195880	T T	A A	1	a0001c0001t0001g0108 a0001c0001t0001g0108	1	HG02717.hp1 HG02717.hp1	intron_variant	MODIFIER	c.652-17T>A c.652-17T>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10		chr1	160195880
chr1:160195882	C C	T T	9	a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0051 others(6): Show a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0100 a0001c0001t0001g0118 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0003g0098	16	HG00438.hp1 HG02055.hp2 HG02109.hp1 others(13): Show HG00438.hp1 HG02055.hp2 HG02109.hp1 HG02258.hp2 HG02572.hp1 HG02965.hp1 HG03098.hp1 NA18942.hp2 NA18951.hp2 NA18962.hp1 NA18978.hp1 NA18979.hp1 NA18991.hp2 NA19057.hp2 NA19068.hp1 NA19240.hp1	intron_variant	MODIFIER	c.652-15C>T c.652-15C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	5/10		chr1	160195882
chr1:160196046	C C	G G	3	a0001c0001t0001g0039 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0039 a0001c0001t0001g0082 a0001c0001t0001g0084	4	HG02015.hp1 NA18943.hp1 NA18972.hp2 others(1): Show HG02015.hp1 NA18943.hp1 NA18972.hp2 NA19007.hp1	intron_variant	MODIFIER	c.782+19C>G c.782+19C>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196046
chr1:160196055	G G	A A	5	a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0132 others(2): Show a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134	9	HG00438.hp1 NA18942.hp2 NA18951.hp2 others(6): Show HG00438.hp1 NA18942.hp2 NA18951.hp2 NA18962.hp1 NA18978.hp1 NA18979.hp1 NA18991.hp2 NA19057.hp2 NA19068.hp1	intron_variant	MODIFIER	c.782+28G>A c.782+28G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196055
chr1:160196061	G G	A A	4	a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0008g0050 others(1): Show a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0008g0050 a0001c0001t0009g0053	4	HG01106.hp2 HG01891.hp2 HG03471.hp1 others(1): Show HG01106.hp2 HG01891.hp2 HG03471.hp1 HG03579.hp2	intron_variant	MODIFIER	c.782+34G>A c.782+34G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196061
chr1:160196317	G G	A A	1	a0001c0001t0001g0023 a0001c0001t0001g0023	3	HG00733.hp2 HG01515.hp2 HG01517.hp2 HG00733.hp2 HG01515.hp2 HG01517.hp2	intron_variant	MODIFIER	c.782+290G>A c.782+290G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196317
chr1:160196320	T T	C C	2	a0001c0001t0001g0008 a0001c0001t0002g0008 a0001c0001t0001g0008 a0001c0001t0002g0008	8	HG02258.hp1 HG02559.hp1 HG02895.hp1 others(5): Show HG02258.hp1 HG02559.hp1 HG02895.hp1 HG02897.hp1 HG03041.hp2 HG03195.hp1 HG03225.hp2 NA20300.hp1	intron_variant	MODIFIER	c.782+293T>C c.782+293T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196320
chr1:160196381	C C	T T	1	a0001c0001t0001g0035 a0001c0001t0001g0035	2	NA18984.hp1 NA19090.hp2 NA18984.hp1 NA19090.hp2	intron_variant	MODIFIER	c.782+354C>T c.782+354C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196381
chr1:160196393	T T	G G	140	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(137): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0002g0099 a0001c0001t0003g0098 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0041 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0010t0001g0059 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	435	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(432): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.782+366T>G c.782+366T>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196393
chr1:160196445	T T	C C	43	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 others(40): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0037 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0078 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0002g0008 a0001c0001t0002g0099 a0001c0001t0003g0098 a0001c0010t0001g0059 a0005c0011t0001g0003 a0008c0008t0001g0112 a0009c0007t0001g0126	123	HG00280.hp1 HG00438.hp1 HG00642.hp2 others(120): Show HG00280.hp1 HG00438.hp1 HG00642.hp2 HG00733.hp2 HG00741.hp1 HG01074.hp1 HG01167.hp1 HG01168.hp1 HG01192.hp2 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01515.hp2 HG01517.hp2 HG01928.hp1 HG01981.hp1 HG02055.hp2 HG02074.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03490.hp2 HG03540.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18941.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18951.hp2 NA18960.hp1 NA18962.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18980.hp1 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp2 NA18991.hp2 NA18999.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19043.hp2 NA19054.hp2 NA19055.hp2 NA19057.hp2 NA19058.hp2 NA19068.hp1 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20805.hp1 NA20805.hp2 NA21309.hp2	intron_variant	MODIFIER	c.782+418T>C c.782+418T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196445
chr1:160196477	CT CT	C C	8	a0001c0001t0001g0083 a0001c0001t0001g0104 a0001c0001t0004g0050 others(5): Show a0001c0001t0001g0083 a0001c0001t0001g0104 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0008g0050 a0001c0001t0009g0053 a0003c0003t0003g0030 a0003c0003t0003g0129	10	HG01106.hp2 HG01891.hp2 HG02896.hp1 others(7): Show HG01106.hp2 HG01891.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp2 HG03209.hp1 HG03471.hp1 HG03579.hp2 NA18941.hp1 NA19077.hp1	intron_variant	MODIFIER	c.782+463delT c.782+463delT	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10	INFO_REALIGN_3_PRIME	chr1	160196477
chr1:160196501	C C	T T	2	a0001c0001t0001g0031 a0001c0001t0001g0135 a0001c0001t0001g0031 a0001c0001t0001g0135	3	HG02818.hp1 HG03453.hp1 NA21309.hp2 HG02818.hp1 HG03453.hp1 NA21309.hp2	intron_variant	MODIFIER	c.782+474C>T c.782+474C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196501
chr1:160196564	G G	A A	2	a0001c0001t0001g0065 a0001c0001t0001g0123 a0001c0001t0001g0065 a0001c0001t0001g0123	2	HG02148.hp1 NA19240.hp2 HG02148.hp1 NA19240.hp2	intron_variant	MODIFIER	c.782+537G>A c.782+537G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196564
chr1:160196667	G G	A A	2	a0001c0001t0001g0005 a0001c0001t0001g0052 a0001c0001t0001g0005 a0001c0001t0001g0052	16	NA18944.hp2 NA18945.hp1 NA18960.hp1 others(13): Show NA18944.hp2 NA18945.hp1 NA18960.hp1 NA18962.hp2 NA18970.hp1 NA18975.hp1 NA18984.hp2 NA18985.hp2 NA19009.hp2 NA19055.hp2 NA19072.hp1 NA19077.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19090.hp1	intron_variant	MODIFIER	c.782+640G>A c.782+640G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196667
chr1:160196685	T T	A A	126	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(123): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0002g0099 a0001c0001t0003g0098 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0041 a0001c0010t0001g0059 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	410	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(407): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.782+658T>A c.782+658T>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196685
chr1:160196799	C C	T T	1	a0001c0001t0001g0057 a0001c0001t0001g0057	1	NA19068.hp2 NA19068.hp2	intron_variant	MODIFIER	c.783-770C>T c.783-770C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196799
chr1:160196907	A A	G G	1	a0001c0001t0001g0082 a0001c0001t0001g0082	1	NA18972.hp2 NA18972.hp2	intron_variant	MODIFIER	c.783-662A>G c.783-662A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160196907
chr1:160197036	C C	T T	12	a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 others(9): Show a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0044 a0001c0001t0001g0060 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0124 a0001c0001t0001g0133 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0002t0001g0088	20	HG00609.hp2 HG00642.hp1 HG02027.hp2 others(17): Show HG00609.hp2 HG00642.hp1 HG02027.hp2 HG02155.hp1 HG02523.hp1 HG03209.hp2 HG03540.hp2 NA18941.hp2 NA18942.hp1 NA18949.hp2 NA18962.hp1 NA18997.hp1 NA19011.hp1 NA19030.hp2 NA19056.hp2 NA19065.hp2 NA19075.hp2 NA19084.hp1 NA19086.hp1 NA21309.hp1	intron_variant	MODIFIER	c.783-533C>T c.783-533C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160197036
chr1:160197115	C C	T T	139	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(136): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0002g0099 a0001c0001t0003g0098 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0041 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0010t0001g0059 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	431	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(428): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.783-454C>T c.783-454C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160197115
chr1:160197164	A A	ACT ACT	11	a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0029 others(8): Show a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0029 a0001c0001t0001g0051 a0001c0001t0001g0062 a0001c0001t0001g0100 a0001c0001t0001g0118 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0003g0098 a0002c0004t0002g0119	20	HG00438.hp1 HG00741.hp2 HG02055.hp2 others(17): Show HG00438.hp1 HG00741.hp2 HG02055.hp2 HG02109.hp1 HG02258.hp2 HG02572.hp1 HG02647.hp1 HG02723.hp2 HG02896.hp2 HG02965.hp1 HG03098.hp1 HG03486.hp1 NA18942.hp2 NA18951.hp2 NA18978.hp1 NA18979.hp1 NA18991.hp2 NA19057.hp2 NA19068.hp1 NA19240.hp1	intron_variant	MODIFIER	c.783-401_783-400dup others(2): Show c.783-401_783-400dupTC	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10	INFO_REALIGN_3_PRIME	chr1	160197164
chr1:160197174	A A	G G	10	a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 others(7): Show a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0044 a0001c0001t0001g0060 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0124 a0001c0001t0001g0133 a0001c0001t0007g0024	18	HG00609.hp2 HG00642.hp1 HG02027.hp2 others(15): Show HG00609.hp2 HG00642.hp1 HG02027.hp2 HG02155.hp1 HG02523.hp1 HG03540.hp2 NA18941.hp2 NA18942.hp1 NA18949.hp2 NA18962.hp1 NA18997.hp1 NA19011.hp1 NA19056.hp2 NA19065.hp2 NA19075.hp2 NA19084.hp1 NA19086.hp1 NA21309.hp1	intron_variant	MODIFIER	c.783-395A>G c.783-395A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160197174
chr1:160197386	G G	A A	1	a0001c0001t0001g0034 a0001c0001t0001g0034	2	HG03490.hp1 HG03492.hp2 HG03490.hp1 HG03492.hp2	intron_variant	MODIFIER	c.783-183G>A c.783-183G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160197386
chr1:160197435	C C	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	3	NA18997.hp1 NA19084.hp1 NA19086.hp1 NA18997.hp1 NA19084.hp1 NA19086.hp1	intron_variant	MODIFIER	c.783-134C>T c.783-134C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160197435
chr1:160197524	T T	A A	4	a0001c0001t0001g0045 a0002c0004t0002g0116 a0002c0004t0002g0119 others(1): Show a0001c0001t0001g0045 a0002c0004t0002g0116 a0002c0004t0002g0119 a0002c0005t0002g0049	6	HG00741.hp2 HG01109.hp2 HG03225.hp1 others(3): Show HG00741.hp2 HG01109.hp2 HG03225.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2	intron_variant	MODIFIER	c.783-45T>A c.783-45T>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	6/10		chr1	160197524
chr1:160197746	T T	C C	3	a0002c0004t0002g0116 a0002c0004t0002g0119 a0002c0005t0002g0049 a0002c0004t0002g0116 a0002c0004t0002g0119 a0002c0005t0002g0049	4	HG00741.hp2 HG01109.hp2 HG03225.hp1 others(1): Show HG00741.hp2 HG01109.hp2 HG03225.hp1 HG06807.hp1	intron_variant	MODIFIER	c.828+132T>C c.828+132T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160197746
chr1:160197756	T T	C C	2	a0001c0001t0001g0066 a0001c0001t0001g0132 a0001c0001t0001g0066 a0001c0001t0001g0132	2	NA18951.hp1 NA19068.hp1 NA18951.hp1 NA19068.hp1	intron_variant	MODIFIER	c.828+142T>C c.828+142T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160197756
chr1:160197816	A A	G G	1	a0001c0001t0001g0036 a0001c0001t0001g0036	2	NA18972.hp1 NA18998.hp1 NA18972.hp1 NA18998.hp1	intron_variant	MODIFIER	c.828+202A>G c.828+202A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160197816
chr1:160197862	C C	CA CA	3	a0001c0001t0001g0013 a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0013 a0001c0001t0001g0060 a0001c0001t0001g0065	7	HG00642.hp1 HG01123.hp2 HG01928.hp2 others(4): Show HG00642.hp1 HG01123.hp2 HG01928.hp2 HG01978.hp2 HG02148.hp1 HG02273.hp1 HG02293.hp2	intron_variant	MODIFIER	c.828+256dupA c.828+256dupA	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10	INFO_REALIGN_3_PRIME	chr1	160197862
chr1:160197888	G G	A A	1	a0001c0001t0001g0123 a0001c0001t0001g0123	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.828+274G>A c.828+274G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160197888
chr1:160197994	G G	C C	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	NA19043.hp1 NA19043.hp1	intron_variant	MODIFIER	c.828+380G>C c.828+380G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160197994
chr1:160198005	C C	T T	1	a0001c0001t0001g0091 a0001c0001t0001g0091	1	HG02132.hp2 HG02132.hp2	intron_variant	MODIFIER	c.828+391C>T c.828+391C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198005
chr1:160198006	G G	A A	1	a0001c0001t0001g0115 a0001c0001t0001g0115	1	HG04228.hp2 HG04228.hp2	intron_variant	MODIFIER	c.828+392G>A c.828+392G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198006
chr1:160198056	A A	G G	140	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(137): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0002g0099 a0001c0001t0003g0098 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0041 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0010t0001g0059 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	435	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(432): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.828+442A>G c.828+442A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198056
chr1:160198105	G G	A A	2	a0001c0001t0001g0105 a0001c0001t0001g0121 a0001c0001t0001g0105 a0001c0001t0001g0121	2	HG02886.hp1 HG06807.hp2 HG02886.hp1 HG06807.hp2	intron_variant	MODIFIER	c.828+491G>A c.828+491G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198105
chr1:160198126	T T	C C	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.828+512T>C c.828+512T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198126
chr1:160198127	C C	T T	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.828+513C>T c.828+513C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198127
chr1:160198128	A A	C C	1	a0001c0001t0001g0063 a0001c0001t0001g0063	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.828+514A>C c.828+514A>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198128
chr1:160198211	C C	T T	2	a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0066 a0001c0001t0001g0068	2	HG00408.hp1 NA18951.hp1 HG00408.hp1 NA18951.hp1	intron_variant	MODIFIER	c.829-466C>T c.829-466C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198211
chr1:160198232	G G	A A	1	a0001c0010t0001g0059 a0001c0010t0001g0059	1	HG03540.hp1 HG03540.hp1	intron_variant	MODIFIER	c.829-445G>A c.829-445G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198232
chr1:160198274	G G	C C	5	a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0132 others(2): Show a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0132 a0001c0001t0001g0134 a0006c0012t0001g0079	9	HG00438.hp1 NA18942.hp2 NA18951.hp2 others(6): Show HG00438.hp1 NA18942.hp2 NA18951.hp2 NA18978.hp1 NA18979.hp1 NA18991.hp2 NA18992.hp2 NA19057.hp2 NA19068.hp1	intron_variant	MODIFIER	c.829-403G>C c.829-403G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198274
chr1:160198414	G G	A A	1	a0001c0002t0001g0088 a0001c0002t0001g0088	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.829-263G>A c.829-263G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198414
chr1:160198454	A A	G G	1	a0001c0001t0001g0104 a0001c0001t0001g0104	1	NA18941.hp1 NA18941.hp1	intron_variant	MODIFIER	c.829-223A>G c.829-223A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198454
chr1:160198574	T T	C C	1	a0001c0001t0004g0127 a0001c0001t0004g0127	1	HG01106.hp2 HG01106.hp2	intron_variant	MODIFIER	c.829-103T>C c.829-103T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198574
chr1:160198578	G G	A A	38	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(35): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0026 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0109 a0001c0001t0001g0120 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0002t0001g0041 a0004c0006t0001g0007	146	HG00099.hp2 HG00140.hp1 HG00408.hp2 others(143): Show HG00099.hp2 HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp2 HG00558.hp1 HG00597.hp1 HG00673.hp2 HG00735.hp2 HG01070.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01123.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01978.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02148.hp2 HG02155.hp2 HG02273.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02647.hp2 HG02738.hp2 HG02922.hp1 HG02970.hp1 HG03239.hp2 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04204.hp1 NA18612.hp2 NA18747.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp2 NA18947.hp1 NA18952.hp2 NA18953.hp1 NA18956.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18968.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp2 NA18977.hp2 NA18978.hp2 NA18981.hp2 NA18985.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19002.hp1 NA19003.hp2 NA19005.hp2 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19054.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19076.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp2 NA19082.hp2 NA19087.hp2 NA19089.hp2 NA19091.hp2 NA20129.hp2 NA20300.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.829-99G>A c.829-99G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	7/10		chr1	160198578
chr1:160198928	A A	G G	1	a0001c0001t0005g0048 a0001c0001t0005g0048	2	HG02809.hp1 NA19030.hp1 HG02809.hp1 NA19030.hp1	intron_variant	MODIFIER	c.884-25A>G c.884-25A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	8/10		chr1	160198928
chr1:160199094	C C	A A	1	a0001c0001t0001g0124 a0001c0001t0001g0124	1	HG03540.hp2 HG03540.hp2	intron_variant	MODIFIER	c.984+41C>A c.984+41C>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199094
chr1:160199217	C C	T T	1	a0001c0001t0001g0081 a0001c0001t0001g0081	1	HG03239.hp2 HG03239.hp2	intron_variant	MODIFIER	c.984+164C>T c.984+164C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199217
chr1:160199373	T T	C C	1	a0001c0001t0002g0099 a0001c0001t0002g0099	1	HG02257.hp1 HG02257.hp1	intron_variant	MODIFIER	c.984+320T>C c.984+320T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199373
chr1:160199414	A A	G G	1	a0001c0001t0001g0017 a0001c0001t0001g0017	4	HG02451.hp1 HG02723.hp1 HG02895.hp2 others(1): Show HG02451.hp1 HG02723.hp1 HG02895.hp2 HG03195.hp2	intron_variant	MODIFIER	c.984+361A>G c.984+361A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199414
chr1:160199440	G G	A A	2	a0001c0001t0001g0023 a0008c0008t0001g0112 a0001c0001t0001g0023 a0008c0008t0001g0112	4	HG00733.hp2 HG01192.hp2 HG01515.hp2 others(1): Show HG00733.hp2 HG01192.hp2 HG01515.hp2 HG01517.hp2	intron_variant	MODIFIER	c.984+387G>A c.984+387G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199440
chr1:160199498	A A	G G	1	a0001c0001t0001g0110 a0001c0001t0001g0110	1	HG02280.hp1 HG02280.hp1	intron_variant	MODIFIER	c.985-353A>G c.985-353A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199498
chr1:160199613	T T	C C	1	a0001c0001t0002g0027 a0001c0001t0002g0027	3	HG01891.hp1 HG03139.hp1 HG03453.hp2 HG01891.hp1 HG03139.hp1 HG03453.hp2	intron_variant	MODIFIER	c.985-238T>C c.985-238T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199613
chr1:160199638	A A	G G	4	a0001c0001t0001g0076 a0002c0004t0002g0116 a0002c0004t0002g0119 others(1): Show a0001c0001t0001g0076 a0002c0004t0002g0116 a0002c0004t0002g0119 a0002c0005t0002g0049	5	HG00741.hp2 HG01109.hp2 HG02630.hp1 others(2): Show HG00741.hp2 HG01109.hp2 HG02630.hp1 HG03225.hp1 HG06807.hp1	intron_variant	MODIFIER	c.985-213A>G c.985-213A>G	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199638
chr1:160199651	G G	A A	1	a0001c0001t0006g0122 a0001c0001t0006g0122	1	HG03209.hp2 HG03209.hp2	intron_variant	MODIFIER	c.985-200G>A c.985-200G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199651
chr1:160199683	T T	C C	138	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(135): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0003g0098 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0041 a0001c0002t0001g0088 a0001c0002t0001g0089 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	433	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(430): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.985-168T>C c.985-168T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199683
chr1:160199815	T T	C C	1	a0001c0001t0001g0080 a0001c0001t0001g0080	1	NA18990.hp1 NA18990.hp1	intron_variant	MODIFIER	c.985-36T>C c.985-36T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	9/10		chr1	160199815
chr1:160199983	G G	A A	2	a0001c0001t0001g0067 a0001c0001t0001g0136 a0001c0001t0001g0067 a0001c0001t0001g0136	2	HG01192.hp1 HG01261.hp1 HG01192.hp1 HG01261.hp1	intron_variant	MODIFIER	c.1059+58G>A c.1059+58G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160199983
chr1:160199992	C C	T T	1	a0001c0001t0006g0122 a0001c0001t0006g0122	1	HG03209.hp2 HG03209.hp2	intron_variant	MODIFIER	c.1059+67C>T c.1059+67C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160199992
chr1:160200030	G G	A A	5	a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0132 others(2): Show a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0132 a0001c0001t0001g0134 a0006c0012t0001g0079	9	HG00438.hp1 NA18942.hp2 NA18951.hp2 others(6): Show HG00438.hp1 NA18942.hp2 NA18951.hp2 NA18978.hp1 NA18979.hp1 NA18991.hp2 NA18992.hp2 NA19057.hp2 NA19068.hp1	intron_variant	MODIFIER	c.1059+105G>A c.1059+105G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160200030
chr1:160200160	T T	C C	1	a0001c0001t0001g0044 a0001c0001t0001g0044	2	NA19056.hp2 NA19065.hp2 NA19056.hp2 NA19065.hp2	intron_variant	MODIFIER	c.1059+235T>C c.1059+235T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160200160
chr1:160200274	G G	C C	2	a0001c0001t0001g0046 a0001c0001t0001g0103 a0001c0001t0001g0046 a0001c0001t0001g0103	3	HG01168.hp1 NA18986.hp1 NA19058.hp2 HG01168.hp1 NA18986.hp1 NA19058.hp2	intron_variant	MODIFIER	c.1059+349G>C c.1059+349G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160200274
chr1:160200391	T T	C C	6	a0001c0001t0001g0076 a0001c0001t0002g0027 a0001c0001t0005g0048 others(3): Show a0001c0001t0001g0076 a0001c0001t0002g0027 a0001c0001t0005g0048 a0002c0004t0002g0116 a0002c0004t0002g0119 a0002c0005t0002g0049	10	HG00741.hp2 HG01109.hp2 HG01891.hp1 others(7): Show HG00741.hp2 HG01109.hp2 HG01891.hp1 HG02630.hp1 HG02809.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp2 HG06807.hp1 NA19030.hp1	intron_variant	MODIFIER	c.1059+466T>C c.1059+466T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160200391
chr1:160200394	G G	C C	18	a0001c0001t0001g0006 a0001c0001t0001g0015 a0001c0001t0001g0023 others(15): Show a0001c0001t0001g0006 a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0060 a0001c0001t0001g0106 a0001c0001t0001g0115 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0007g0024 a0002c0004t0002g0117 a0008c0008t0001g0112	43	HG00609.hp2 HG00642.hp1 HG00733.hp2 others(40): Show HG00609.hp2 HG00642.hp1 HG00733.hp2 HG01192.hp2 HG01515.hp2 HG01517.hp2 HG02027.hp2 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02622.hp2 HG02630.hp2 HG02717.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp1 HG03453.hp1 HG03540.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18942.hp1 NA18949.hp2 NA18962.hp1 NA19011.hp1 NA19043.hp2 NA19056.hp2 NA19065.hp2 NA19075.hp2 NA19240.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1059+469G>C c.1059+469G>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160200394
chr1:160200408	C C	T T	1	a0001c0001t0001g0064 a0001c0001t0001g0064	1	NA18977.hp1 NA18977.hp1	intron_variant	MODIFIER	c.1059+483C>T c.1059+483C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160200408
chr1:160200440	TATA TATA	T T	19	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 others(16): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0022 a0001c0001t0001g0037 a0001c0001t0001g0046 a0001c0001t0001g0052 a0001c0001t0001g0061 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0114 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0002g0008 a0005c0011t0001g0003 a0009c0007t0001g0126	71	HG00280.hp1 HG00558.hp2 HG00642.hp2 others(68): Show HG00280.hp1 HG00558.hp2 HG00642.hp2 HG00741.hp1 HG01074.hp1 HG01167.hp1 HG01168.hp1 HG01243.hp2 HG01261.hp2 HG01358.hp1 HG01928.hp1 HG01952.hp2 HG01981.hp1 HG02074.hp1 HG02083.hp1 HG02258.hp1 HG02559.hp1 HG02602.hp1 HG02683.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02970.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03195.hp1 HG03225.hp2 HG03490.hp2 HG03669.hp2 HG03688.hp1 HG04115.hp1 HG04184.hp2 HG06807.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18960.hp1 NA18962.hp2 NA18967.hp2 NA18970.hp1 NA18975.hp1 NA18980.hp1 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18999.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp2 NA19054.hp2 NA19055.hp2 NA19058.hp2 NA19070.hp2 NA19072.hp1 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp2 NA19087.hp1 NA19089.hp1 NA19090.hp1 NA20300.hp1 NA20805.hp1	intron_variant	MODIFIER	c.1059+520_1059+522d others(5): Show c.1059+520_1059+522delTAA	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10	INFO_REALIGN_3_PRIME	chr1	160200440
chr1:160200547	T T	C C	1	a0001c0001t0001g0023 a0001c0001t0001g0023	3	HG00733.hp2 HG01515.hp2 HG01517.hp2 HG00733.hp2 HG01515.hp2 HG01517.hp2	intron_variant	MODIFIER	c.1059+622T>C c.1059+622T>C	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160200547
chr1:160200941	C C	T T	10	a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0031 others(7): Show a0001c0001t0001g0015 a0001c0001t0001g0024 a0001c0001t0001g0031 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0060 a0001c0001t0001g0106 a0001c0001t0001g0115 a0001c0001t0001g0133 a0001c0001t0007g0024	18	HG00609.hp2 HG00642.hp1 HG02027.hp2 others(15): Show HG00609.hp2 HG00642.hp1 HG02027.hp2 HG02155.hp1 HG02300.hp1 HG02523.hp1 HG02559.hp2 HG03453.hp1 HG04228.hp1 HG04228.hp2 NA18942.hp1 NA18949.hp2 NA18962.hp1 NA19011.hp1 NA19056.hp2 NA19065.hp2 NA19075.hp2 NA21309.hp2	intron_variant	MODIFIER	c.1060-304C>T c.1060-304C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160200941
chr1:160201009	G G	A A	19	a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 others(16): Show a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0051 a0001c0001t0001g0076 a0001c0001t0001g0100 a0001c0001t0001g0118 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0002g0027 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0008g0050 a0001c0001t0009g0053 a0002c0004t0002g0116 a0002c0004t0002g0119 a0002c0005t0002g0049 a0006c0012t0001g0079	33	HG00438.hp1 HG00741.hp2 HG01106.hp2 others(30): Show HG00438.hp1 HG00741.hp2 HG01106.hp2 HG01109.hp2 HG01891.hp1 HG01891.hp2 HG02055.hp2 HG02109.hp1 HG02451.hp1 HG02572.hp1 HG02630.hp1 HG02723.hp1 HG02809.hp1 HG02895.hp2 HG02965.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03579.hp2 HG06807.hp1 NA18942.hp2 NA18951.hp2 NA18978.hp1 NA18979.hp1 NA18991.hp2 NA18992.hp2 NA19030.hp1 NA19057.hp2 NA19068.hp1 NA19240.hp1	intron_variant	MODIFIER	c.1060-236G>A c.1060-236G>A	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160201009
chr1:160201078	CTAACCCA CTAACCCA	C C	136	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(133): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0002g0008 a0001c0001t0002g0027 a0001c0001t0003g0098 a0001c0001t0004g0050 a0001c0001t0004g0127 a0001c0001t0005g0048 a0001c0001t0006g0122 a0001c0001t0007g0024 a0001c0001t0008g0050 a0001c0001t0009g0053 a0001c0002t0001g0041 a0002c0004t0002g0116 a0002c0004t0002g0117 a0002c0004t0002g0119 a0002c0005t0002g0049 a0003c0003t0003g0030 a0003c0003t0003g0129 a0004c0006t0001g0007 a0005c0011t0001g0003 a0006c0012t0001g0079 a0007c0009t0001g0070 a0008c0008t0001g0112 a0009c0007t0001g0126	431	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(428): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.1060-157_1060-151d others(9): Show c.1060-157_1060-151delACCCATA	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10	INFO_REALIGN_3_PRIME	chr1	160201078
chr1:160201202	C C	T T	1	a0001c0001t0001g0055 a0001c0001t0001g0055	1	HG03239.hp1 HG03239.hp1	intron_variant	MODIFIER	c.1060-43C>T c.1060-43C>T	CASQ1	ENSG00000143318.13	transcript	ENST00000368078.8	protein_coding	10/10		chr1	160201202

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🧬 JoGo Online Haplotype Explorer CASQ1_chr1_160185575_160206886

JoGo Local Haplotype Explorer (on iGV) CASQ1_chr1_160185575_160206886

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 12)

TTranscript Level Haplotype Info (Total: 9)

GGenebody Level Haplotype Info (Total: 136)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 12)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 20)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 141)

Haplotype Details by Sample (Haploid Level) (Total: 440)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 8)

CCoding Level Variants (Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 8)

GGenebody Level Haplotype Variants (Intron) (Total: 138)

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Annotation (Repeats)

Annotation (SNP Array)