Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| geneid | 100996631 |
|---|---|
| ensemblid | ENSG00000268235.9 |
| hgncid | 48369 |
| symbol | TCP11X1 |
| name | t-complex 11 family, X-linked 1 |
| refseq_nuc | NM_001405026.1 |
| refseq_prot | NP_001391955.1 |
| ensembl_nuc | ENST00000622971.4 |
| ensembl_prot | ENSP00000494553.1 |
| mane_status | MANE Select |
| chr | chrX |
| start | 102215301 |
| end | 102226795 |
| strand | + |
| ver | v1.2 |
| region | chrX:102215301-102226795 |
| region5000 | chrX:102210301-102231795 |
| regionname0 | TCP11X1_chrX_102215301_102226795 |
| regionname5000 | TCP11X1_chrX_102210301_102231795 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 502 | 19 | 5 | 4 | 6 | 3 | 1 | 2 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0002 | 0/0 | 502 | 14 | 8 | 4 | 1 | 0 | 1 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0003 | 0/0 | 60 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0004 | 0/0 | 455 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0005 | 0/0 | 295 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0006 | 0/0 | 223 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| chapid | grch38/chm13v2 | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 0/0 | 1509 | 19 | 5 | 4 | 6 | 3 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| c0002 | 0/0 | 1509 | 10 | 5 | 4 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| c0003 | 0/0 | 1509 | 4 | 3 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| c0004 | 0/0 | 1509 | 1 | 0 | 0 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| c0005 | 0/0 | 1511 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| c0006 | 0/0 | 1505 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| c0007 | 0/0 | 1510 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| thapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 0/0 | 250 | 34 | 13 | 9 | 6 | 3 | 3 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| t0002 | 0/0 | 250 | 2 | 0 | 0 | 2 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| t0003 | 0/0 | 249 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| ghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/0 | 6 | 1 | 2 | 0 | 2 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0002 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0003 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0004 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0005 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0006 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0007 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0008 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0009 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0010 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0011 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0012 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0013 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0016 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0018 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0020 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0021 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0022 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0024 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0025 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| g0026 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| achapid | grch38/chm13v2 | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 0/0 | 1509 | 19 | 5 | 4 | 6 | 3 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0002c0002 | 0/0 | 1509 | 10 | 5 | 4 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0002c0003 | 0/0 | 1509 | 4 | 3 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0003c0004 | 0/0 | 1509 | 1 | 0 | 0 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0004c0007 | 0/0 | 1510 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0005c0006 | 0/0 | 1505 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0006c0005 | 0/0 | 1511 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 0/0 | 1758 | 19 | 5 | 4 | 6 | 3 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0002c0002t0001 | 0/0 | 1758 | 10 | 5 | 4 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0002c0003t0001 | 0/0 | 1758 | 3 | 3 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0002c0003t0002 | 0/0 | 1758 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0003c0004t0001 | 0/0 | 1758 | 1 | 0 | 0 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0004c0007t0002 | 0/0 | 1759 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0005c0006t0003 | 0/0 | 1753 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| a0006c0005t0001 | 0/0 | 1760 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | copy fasta | chrX | 102210301 | 102231795 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 6 | 1 | 2 | 0 | 2 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0003 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0004 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0005 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0006 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0009 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0010 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0013 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0001c0001t0001g0022 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0002t0001g0002 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0002t0001g0007 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0002t0001g0008 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0002t0001g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0002t0001g0016 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0002t0001g0020 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0002t0001g0025 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0002t0001g0026 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0003t0001g0011 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0003t0001g0012 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0003t0001g0017 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0002c0003t0002g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0003c0004t0001g0024 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0004c0007t0002g0023 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0005c0006t0003g0018 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| a0006c0005t0001g0021 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG00423 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | CHS | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG00423 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | CHS | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG01071 | hp1 | a0002 | c0002 | t0001 | g0026 | AMR | PUR | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG01071 | hp2 | a0006 | c0005 | t0001 | g0021 | AMR | PUR | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG01175 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG01175 | hp2 | a0002 | c0002 | t0001 | g0008 | AMR | PUR | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0022 | EUR | IBS | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG01981 | hp1 | a0001 | c0001 | t0001 | g0006 | AMR | PEL | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG01981 | hp2 | a0002 | c0002 | t0001 | g0025 | AMR | PEL | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0013 | EAS | KHV | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0003 | EAS | KHV | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG02293 | hp1 | a0001 | c0001 | t0001 | g0006 | AMR | PEL | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG02293 | hp2 | a0002 | c0002 | t0001 | g0007 | AMR | PEL | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG02622 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG02622 | hp2 | a0002 | c0002 | t0001 | g0002 | AFR | GWD | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG02970 | hp1 | a0002 | c0002 | t0001 | g0016 | AFR | ESN | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG02970 | hp2 | a0001 | c0001 | t0001 | g0010 | AFR | ESN | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG03017 | hp1 | a0002 | c0002 | t0001 | g0020 | SAS | PJL | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG03195 | hp1 | a0002 | c0002 | t0001 | g0015 | AFR | ESN | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG03195 | hp2 | a0002 | c0003 | t0001 | g0017 | AFR | ESN | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA18963 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA18963 | hp2 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA18971 | hp1 | a0002 | c0003 | t0002 | g0019 | EAS | JPT | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA19000 | hp1 | a0004 | c0007 | t0002 | g0023 | EAS | JPT | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA19004 | hp1 | a0005 | c0006 | t0003 | g0018 | EAS | JPT | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA19030 | hp1 | a0002 | c0002 | t0001 | g0002 | AFR | LWK | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA19030 | hp2 | a0001 | c0001 | t0001 | g0005 | AFR | LWK | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA19240 | hp1 | a0002 | c0002 | t0001 | g0002 | AFR | YRI | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA19240 | hp2 | a0001 | c0001 | t0001 | g0014 | AFR | YRI | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA20905 | hp1 | a0003 | c0004 | t0001 | g0024 | SAS | GIH | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| HG03471 | hp1 | a0002 | c0003 | t0001 | g0012 | AFR | MSL | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA21309 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| NA21309 | hp2 | a0002 | c0003 | t0001 | g0011 | AFR | LWK | TCP11X1_chrX_102210301_102231795 | TCP11X1 | chrX | 102210301 | 102231795 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:102218016
|
AT | A | 1 | a0003 | 1 | NA20905.hp1 | frameshift_variant | HIGH | c.169delT | p.Ser57fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/10 | 220/1758 | 169/1509 | 57/502 | INFO_REALIGN_3_PRIME | chrX | 102218016 | |
| chrX:102221545
|
G | GA | 1 | a0003 | 1 | NA20905.hp1 | frameshift_variant | HIGH | c.237dupA | p.Gly80fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/10 | 289/1758 | 238/1509 | 80/502 | INFO_REALIGN_3_PRIME | chrX | 102221545 | |
| chrX:102223409
|
G | GA | 1 | a0006 | 1 | HG01071.hp2 | frameshift_variant | HIGH | c.604dupA | p.Met202fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 6/10 | 656/1758 | 605/1509 | 202/502 | INFO_REALIGN_3_PRIME | chrX | 102223409 | |
| chrX:102223867
|
T | C | 5 | a0002a0003a0004others(2): Show | 18 | HG01071.hp1 HG01071.hp2 HG01175.hp2 others(15): Show |
missense_variant | MODERATE | c.812T>C | p.Val271Ala | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 7/10 | 863/1758 | 812/1509 | 271/502 | chrX | 102223867 | ||
| chrX:102223883
|
CG | C | 1 | a0005 | 1 | NA19004.hp1 | frameshift_variant | HIGH | c.832delG | p.Ala278fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 7/10 | 883/1758 | 832/1509 | 278/502 | INFO_REALIGN_3_PRIME | chrX | 102223883 | |
| chrX:102224082
|
A | AG | 1 | a0002 | 1 | HG03017.hp1 | frameshift_variant&splice_region_variant | HIGH | c.931-1dupG | p.Thr311fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/10 | 982/1758 | 931/1509 | 311/502 | INFO_REALIGN_3_PRIME | chrX | 102224082 | |
| chrX:102224114
|
GA | G | 1 | a0005 | 1 | NA19004.hp1 | frameshift_variant | HIGH | c.963delA | p.Glu321fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/10 | 1014/1758 | 963/1509 | 321/502 | INFO_REALIGN_3_PRIME | chrX | 102224114 | |
| chrX:102224240
|
GC | G | 1 | a0005 | 1 | NA19004.hp1 | frameshift_variant | HIGH | c.1090delC | p.Leu364fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/10 | 1141/1758 | 1090/1509 | 364/502 | INFO_REALIGN_3_PRIME | chrX | 102224240 | |
| chrX:102225035
|
A | AG | 1 | a0006 | 1 | HG01071.hp2 | frameshift_variant | HIGH | c.1122dupG | p.Thr375fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/10 | 1174/1758 | 1123/1509 | 375/502 | INFO_REALIGN_3_PRIME | chrX | 102225035 | |
| chrX:102226377
|
G | GT | 1 | a0004 | 1 | NA19000.hp1 | frameshift_variant | HIGH | c.1296dupT | p.Leu433fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 10/10 | 1348/1758 | 1297/1509 | 433/502 | INFO_REALIGN_3_PRIME | chrX | 102226377 | |
| chrX:102226405
|
TG | T | 1 | a0005 | 1 | NA19004.hp1 | frameshift_variant | HIGH | c.1319delG | p.Gly440fs | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 10/10 | 1370/1758 | 1319/1509 | 440/502 | INFO_REALIGN_3_PRIME | chrX | 102226405 |
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:102223937
|
T | C | 3 | a0002c0002a0003c0004a0006c0005 | 12 | HG01071.hp1 HG01071.hp2 HG01175.hp2 others(9): Show |
synonymous_variant | LOW | c.882T>C | p.Gly294Gly | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 7/10 | 933/1758 | 882/1509 | 294/502 | chrX | 102223937 |
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:102226608
|
C | T | 3 | a0002c0003t0002a0004c0007t0002a0005c0006t0003 | 3 | NA18971.hp1 NA19000.hp1 NA19004.hp1 |
3_prime_UTR_variant | MODIFIER | c.*11C>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 10/10 | 11 | chrX | 102226608 | |||||
| chrX:102226760
|
TC | T | 1 | a0005c0006t0003 | 1 | NA19004.hp1 | 3_prime_UTR_variant | MODIFIER | c.*167delC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 10/10 | 167 | INFO_REALIGN_3_PRIME | chrX | 102226760 |
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:102215698
|
C | G | 3 | a0002c0002t0001g0025a0002c0002t0001g0026a0003c0004t0001g0024 | 3 | HG01071.hp1 HG01981.hp2 NA20905.hp1 |
intron_variant | MODIFIER | c.-11-130C>G | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 1/9 | chrX | 102215698 | ||||||
| chrX:102215786
|
A | G | 1 | a0004c0007t0002g0023 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.-11-42A>G | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 1/9 | chrX | 102215786 | ||||||
| chrX:102216147
|
AT | A | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.127+187delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | 102216147 | |||||
| chrX:102216180
|
TA | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.127+217delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | 102216180 | |||||
| chrX:102216562
|
C | T | 1 | a0001c0001t0001g0022 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.127+597C>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 2/9 | chrX | 102216562 | ||||||
| chrX:102216799
|
A | AT | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.127+838dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | 102216799 | |||||
| chrX:102217243
|
CA | C | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.128-733delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | 102217243 | |||||
| chrX:102217585
|
TG | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.128-390delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | 102217585 | |||||
| chrX:102217696
|
GT | G | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.128-278delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chrX | 102217696 | |||||
| chrX:102218095
|
G | GT | 1 | a0002c0002t0001g0026 | 1 | HG01071.hp1 | intron_variant | MODIFIER | c.230+22dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102218095 | |||||
| chrX:102218138
|
A | G | 1 | a0006c0005t0001g0021 | 1 | HG01071.hp2 | intron_variant | MODIFIER | c.230+58A>G | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102218138 | ||||||
| chrX:102218337
|
AT | A | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.230+261delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102218337 | |||||
| chrX:102218618
|
TG | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.230+541delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102218618 | |||||
| chrX:102219073
|
CA | C | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.230+995delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102219073 | |||||
| chrX:102219183
|
TG | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.230+1106delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102219183 | |||||
| chrX:102219214
|
T | TA | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.230+1135dupA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102219214 | |||||
| chrX:102219379
|
C | CA | 1 | a0002c0002t0001g0026 | 1 | HG01071.hp1 | intron_variant | MODIFIER | c.230+1303dupA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102219379 | |||||
| chrX:102219427
|
CG | C | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.230+1349delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102219427 | |||||
| chrX:102219444
|
G | GT | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.230+1369dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102219444 | |||||
| chrX:102219519
|
AG | A | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.230+1444delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102219519 | |||||
| chrX:102219615
|
C | CA | 1 | a0002c0002t0001g0026 | 1 | HG01071.hp1 | intron_variant | MODIFIER | c.230+1539dupA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102219615 | |||||
| chrX:102219724
|
C | T | 5 | a0002c0002t0001g0020a0002c0002t0001g0025a0002c0002t0001g0026others(2): Show | 5 | HG01071.hp1 HG01071.hp2 HG01981.hp2 others(2): Show |
intron_variant | MODIFIER | c.230+1644C>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102219724 | ||||||
| chrX:102220287
|
CA | C | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-1249delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220287 | |||||
| chrX:102220406
|
AG | A | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-1133delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220406 | |||||
| chrX:102220427
|
T | TG | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-1111dupG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220427 | |||||
| chrX:102220670
|
C | CATATTAT others(14): Show |
1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-867_231-866ins others(21): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220670 | |||||
| chrX:102220692
|
TA | T | 3 | a0001c0001t0001g0001a0002c0002t0001g0016a0002c0003t0001g0017 | 8 | HG00280.hp1 HG00738.hp1 HG01175.hp1 others(5): Show |
intron_variant | MODIFIER | c.231-848delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220692 | ||||||
| chrX:102220692
|
TATA | T | 2 | a0001c0001t0001g0014a0002c0002t0001g0015 | 2 | HG03195.hp1 NA19240.hp2 |
intron_variant | MODIFIER | c.231-848_231-846del others(3): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220692 | ||||||
| chrX:102220693
|
A | ATT | 3 | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0013 | 5 | HG00423.hp1 HG00423.hp2 HG02129.hp1 others(2): Show |
intron_variant | MODIFIER | c.231-847_231-846ins others(2): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220693 | |||||
| chrX:102220693
|
A | ATTTTTTT others(8): Show |
1 | a0006c0005t0001g0021 | 1 | HG01071.hp2 | intron_variant | MODIFIER | c.231-847_231-846ins others(15): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220693 | |||||
| chrX:102220693
|
A | T | 6 | a0001c0001t0001g0005a0001c0001t0001g0006a0002c0002t0001g0002others(3): Show | 10 | HG01981.hp1 HG02293.hp1 HG02622.hp1 others(7): Show |
intron_variant | MODIFIER | c.231-848A>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220693 | ||||||
| chrX:102220694
|
TA | T | 3 | a0001c0001t0001g0010a0002c0003t0001g0011a0002c0003t0001g0012 | 3 | HG02970.hp2 HG03471.hp1 NA21309.hp2 |
intron_variant | MODIFIER | c.231-846delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220694 | ||||||
| chrX:102220695
|
A | AT | 1 | a0001c0001t0001g0022 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.231-826dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220695 | |||||
| chrX:102220695
|
A | ATATAT | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.231-845_231-844ins others(5): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220695 | |||||
| chrX:102220695
|
A | ATATATAT | 1 | a0002c0002t0001g0026 | 1 | HG01071.hp1 | intron_variant | MODIFIER | c.231-845_231-844ins others(7): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220695 | |||||
| chrX:102220695
|
A | ATT | 1 | a0002c0002t0001g0007 | 1 | HG02293.hp2 | intron_variant | MODIFIER | c.231-827_231-826dup others(2): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220695 | |||||
| chrX:102220695
|
A | ATTT | 1 | a0002c0002t0001g0008 | 1 | HG01175.hp2 | intron_variant | MODIFIER | c.231-828_231-826dup others(3): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220695 | |||||
| chrX:102220695
|
A | ATTTT | 1 | a0001c0001t0001g0009 | 1 | NA18963.hp2 | intron_variant | MODIFIER | c.231-829_231-826dup others(4): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220695 | |||||
| chrX:102220695
|
A | T | 13 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(10): Show | 24 | HG00280.hp1 HG00423.hp1 HG00423.hp2 others(21): Show |
intron_variant | MODIFIER | c.231-846A>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220695 | ||||||
| chrX:102220696
|
T | TATATATA others(10): Show |
1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.231-845_231-844ins others(17): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220696 | ||||||
| chrX:102220697
|
T | A | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-844T>A | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220697 | ||||||
| chrX:102220698
|
T | A | 1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.231-843T>A | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220698 | ||||||
| chrX:102220884
|
A | G | 3 | a0002c0003t0002g0019a0004c0007t0002g0023a0005c0006t0003g0018 | 3 | NA18971.hp1 NA19000.hp1 NA19004.hp1 |
intron_variant | MODIFIER | c.231-657A>G | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102220884 | ||||||
| chrX:102220992
|
GC | G | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-547delC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102220992 | |||||
| chrX:102221012
|
A | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-529A>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | chrX | 102221012 | ||||||
| chrX:102221135
|
AG | A | 1 | a0002c0002t0001g0026 | 1 | HG01071.hp1 | intron_variant | MODIFIER | c.231-404delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102221135 | |||||
| chrX:102221180
|
A | AG | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-359dupG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102221180 | |||||
| chrX:102221336
|
AG | A | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-203delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102221336 | |||||
| chrX:102221405
|
C | CT | 1 | a0002c0002t0001g0026 | 1 | HG01071.hp1 | intron_variant | MODIFIER | c.231-135dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102221405 | |||||
| chrX:102221472
|
TG | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.231-66delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chrX | 102221472 | |||||
| chrX:102221727
|
TG | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.351+68delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102221727 | |||||
| chrX:102221742
|
CA | C | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.351+83delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102221742 | |||||
| chrX:102221815
|
TA | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.351+156delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102221815 | |||||
| chrX:102221850
|
CA | C | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.351+191delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102221850 | |||||
| chrX:102221856
|
AT | A | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.351+196delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | chrX | 102221856 | ||||||
| chrX:102221893
|
A | G | 3 | a0002c0002t0001g0015a0002c0003t0001g0012a0002c0003t0001g0017 | 3 | HG03195.hp1 HG03195.hp2 HG03471.hp1 |
intron_variant | MODIFIER | c.351+232A>G | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | chrX | 102221893 | ||||||
| chrX:102221904
|
G | GT | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.351+246dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102221904 | |||||
| chrX:102222057
|
CT | C | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.352-335delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102222057 | |||||
| chrX:102222123
|
TA | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.352-268delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102222123 | |||||
| chrX:102222201
|
TC | T | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.352-191delC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102222201 | |||||
| chrX:102222283
|
GC | G | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.352-105delC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102222283 | |||||
| chrX:102222364
|
C | T | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.352-31C>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | chrX | 102222364 | ||||||
| chrX:102222365
|
T | C | 1 | a0003c0004t0001g0024 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.352-30T>C | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | chrX | 102222365 | ||||||
| chrX:102222372
|
CT | C | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.352-20delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chrX | 102222372 | |||||
| chrX:102222636
|
T | TC | 1 | a0004c0007t0002g0023 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.572+26dupC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chrX | 102222636 | |||||
| chrX:102222863
|
G | T | 1 | a0006c0005t0001g0021 | 1 | HG01071.hp2 | intron_variant | MODIFIER | c.572+248G>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 5/9 | chrX | 102222863 | ||||||
| chrX:102223535
|
AG | A | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.709+20delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chrX | 102223535 | |||||
| chrX:102223589
|
G | C | 26 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(23): Show | 37 | HG00280.hp1 HG00423.hp1 HG00423.hp2 others(34): Show |
intron_variant | MODIFIER | c.709+71G>C | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 6/9 | chrX | 102223589 | ||||||
| chrX:102223598
|
AT | A | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.709+86delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chrX | 102223598 | |||||
| chrX:102223655
|
C | A | 3 | a0002c0003t0002g0019a0004c0007t0002g0023a0005c0006t0003g0018 | 3 | NA18971.hp1 NA19000.hp1 NA19004.hp1 |
intron_variant | MODIFIER | c.710-110C>A | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 6/9 | chrX | 102223655 | ||||||
| chrX:102223729
|
TG | T | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.710-34delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chrX | 102223729 | |||||
| chrX:102223988
|
AG | A | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | splice_region_variant&intron_variant | LOW | c.930+6delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chrX | 102223988 | |||||
| chrX:102224310
|
TG | T | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.1112+48delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224310 | |||||
| chrX:102224352
|
T | TCA | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1112+90_1112+91dup others(2): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224352 | |||||
| chrX:102224392
|
AT | A | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.1112+131delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224392 | |||||
| chrX:102224422
|
GT | G | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.1112+160delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224422 | |||||
| chrX:102224439
|
TA | T | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.1112+178delA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224439 | |||||
| chrX:102224447
|
A | AT | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.1112+186dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224447 | |||||
| chrX:102224513
|
G | C | 1 | a0006c0005t0001g0021 | 1 | HG01071.hp2 | intron_variant | MODIFIER | c.1112+248G>C | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | chrX | 102224513 | ||||||
| chrX:102224536
|
T | TG | 1 | a0006c0005t0001g0021 | 1 | HG01071.hp2 | intron_variant | MODIFIER | c.1112+272dupG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224536 | |||||
| chrX:102224556
|
G | GTA | 1 | a0002c0002t0001g0020 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.1112+295_1112+296d others(4): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224556 | |||||
| chrX:102224696
|
G | GA | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1113-326dupA | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chrX | 102224696 | |||||
| chrX:102224822
|
G | C | 2 | a0002c0003t0001g0012a0002c0003t0001g0017 | 2 | HG03195.hp2 HG03471.hp1 |
intron_variant | MODIFIER | c.1113-205G>C | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 8/9 | chrX | 102224822 | ||||||
| chrX:102225223
|
TG | T | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1276+35delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225223 | |||||
| chrX:102225335
|
C | T | 1 | a0001c0001t0001g0004 | 2 | HG00423.hp2 NA18963.hp1 |
intron_variant | MODIFIER | c.1276+145C>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | chrX | 102225335 | ||||||
| chrX:102225436
|
T | TG | 1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.1276+248dupG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225436 | |||||
| chrX:102225468
|
T | TC | 1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.1276+280dupC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225468 | |||||
| chrX:102225480
|
CTCTTT | C | 2 | a0002c0002t0001g0002a0002c0002t0001g0016 | 4 | HG02622.hp2 HG02970.hp1 NA19030.hp1 others(1): Show |
intron_variant | MODIFIER | c.1276+307_1276+311d others(7): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225480 | |||||
| chrX:102225495
|
TTC | T | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1276+307_1276+308d others(4): Show |
TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225495 | |||||
| chrX:102225498
|
T | C | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1276+308T>C | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | chrX | 102225498 | ||||||
| chrX:102225540
|
T | TG | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1276+351dupG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225540 | |||||
| chrX:102225609
|
TC | T | 1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.1276+422delC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225609 | |||||
| chrX:102225653
|
A | AT | 1 | a0004c0007t0002g0023 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.1276+472dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225653 | |||||
| chrX:102225653
|
AT | A | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1276+472delT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225653 | |||||
| chrX:102225655
|
T | A | 3 | a0002c0002t0001g0025a0002c0002t0001g0026a0003c0004t0001g0024 | 3 | HG01071.hp1 HG01981.hp2 NA20905.hp1 |
intron_variant | MODIFIER | c.1276+465T>A | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | chrX | 102225655 | ||||||
| chrX:102225711
|
G | A | 1 | a0001c0001t0001g0003 | 2 | HG00423.hp1 HG02132.hp1 |
intron_variant | MODIFIER | c.1276+521G>A | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | chrX | 102225711 | ||||||
| chrX:102225715
|
T | TC | 1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.1276+527dupC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225715 | |||||
| chrX:102225781
|
G | A | 4 | a0002c0002t0001g0015a0002c0003t0002g0019a0004c0007t0002g0023others(1): Show | 4 | HG03195.hp1 NA18971.hp1 NA19000.hp1 others(1): Show |
intron_variant | MODIFIER | c.1277-584G>A | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | chrX | 102225781 | ||||||
| chrX:102225850
|
T | TG | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1277-514dupG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225850 | |||||
| chrX:102225912
|
A | AG | 1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.1277-451dupG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102225912 | |||||
| chrX:102226003
|
G | GC | 1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.1277-360dupC | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102226003 | |||||
| chrX:102226227
|
CG | C | 1 | a0002c0002t0001g0025 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.1277-136delG | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102226227 | |||||
| chrX:102226239
|
A | AT | 1 | a0005c0006t0003g0018 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.1277-125dupT | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chrX | 102226239 | |||||
| chrX:102226327
|
A | T | 23 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(20): Show | 33 | HG00280.hp1 HG00423.hp1 HG00423.hp2 others(30): Show |
intron_variant | MODIFIER | c.1277-38A>T | TCP11X1 | ENSG00000268235.9 | transcript | ENST00000622971.4 | protein_coding | 9/9 | chrX | 102226327 |