JoGo LogoJoint Open Genome and Omics Platform (JoGo)
  • Home
    • General
    • Gene
    • Region
    • Variant
    • Haplotype
    • Haplotype by sample
    • ClinVar
    • GWASCatalog
    • GTEx
    • HaplotypeQTL
    • Haplotype
    • Position
    • Clinvar
    • Gene
    • Variant
    • Haplotype
    • Sample
    • FAQ
    • Contact
    • Fundings
    • Developer
    • ChIP-Atlas PeakBrowser
    • ToGoVAR
    • MGeND
    • Nagasaki Lab

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   TP53TG3D_chr16_32248286_32260928  TP53TG3D_chr16_32248286_32260928 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 729264
ensemblid ENSG00000205456.12
hgncid 44657
symbol TP53TG3D
name TP53 target 3D
refseq_nuc NM_001243722.3
refseq_prot NP_001230651.1
ensembl_nuc ENST00000398664.5
ensembl_prot ENSP00000455596.1
mane_status MANE Select
chr chr16
start 32253286
end 32255928
strand +
ver v1.2
region chr16:32253286-32255928
region5000 chr16:32248286-32260928
regionname0 TP53TG3D_chr16_32253286_32255928
regionname5000 TP53TG3D_chr16_32248286_32260928

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 0/0 124 187 12 55 96 12 12 74 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0002 0/0 124 2 2 0 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0003 0/0 124 1 0 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928

chapid grch38/
chm13v2 		clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 0/0 375 127 8 42 60 10 7 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
c0002 0/0 375 56 2 13 35 2 4 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
c0003 0/0 375 4 2 0 1 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
c0004 0/0 375 2 2 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
c0005 0/0 375 1 0 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/0 1094 101 6 35 54 3 3 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0002 0/0 1095 60 3 14 35 2 6 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0003 0/0 1094 18 0 6 6 6 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0004 0/0 1094 2 0 0 0 1 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0005 0/0 1094 2 1 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0006 0/0 1097 2 1 0 0 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0007 0/0 1094 1 0 0 1 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0008 0/0 1094 1 0 0 0 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0009 0/0 1095 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0010 0/0 1094 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
t0011 0/0 1098 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 120 7 39 60 9 5 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0002 0/0 52 3 11 30 2 6 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0003 0/0 4 0 0 4 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0004 0/0 3 2 0 0 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0005 0/0 2 0 2 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0006 0/0 2 1 0 1 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0007 0/0 2 0 2 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0008 0/0 1 0 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0009 0/0 1 0 0 0 1 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0010 0/0 1 0 0 1 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0011 0/0 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
g0012 0/0 1 0 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928

achapid grch38/
chm13v2 		clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 0/0 375 127 8 42 60 10 7 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0002 0/0 375 56 2 13 35 2 4 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0003 0/0 375 4 2 0 1 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0002c0004 0/0 375 2 2 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0003c0005 0/0 375 1 0 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 1468 100 6 35 53 3 3 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0001t0002 0/0 1469 2 0 0 0 0 2 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0001t0003 0/0 1468 18 0 6 6 6 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0001t0004 0/0 1468 2 0 0 0 1 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0001t0005 0/0 1468 2 1 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0001t0007 0/0 1468 1 0 0 1 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0001t0008 0/0 1468 1 0 0 0 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0001t0010 0/0 1468 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0002t0002 0/0 1469 55 1 13 35 2 4 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0002t0009 0/0 1469 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0003t0001 0/0 1468 1 0 0 1 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0003t0006 0/0 1471 2 1 0 0 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0001c0003t0011 0/0 1472 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0002c0004t0002 0/0 1469 2 2 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928
a0003c0005t0002 0/0 1469 1 0 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D copy fasta chr16 32248286 32260928

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 96 5 32 53 3 3 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0001g0005 0/0 2 0 2 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0001g0006 0/0 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0001g0008 0/0 1 0 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0002g0002 0/0 2 0 0 0 0 2 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0003g0001 0/0 18 0 6 6 6 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0004g0001 0/0 1 0 0 0 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0004g0009 0/0 1 0 0 0 1 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0005g0001 0/0 2 1 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0007g0001 0/0 1 0 0 1 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0008g0001 0/0 1 0 0 0 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0001t0010g0001 0/0 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0002t0002g0002 0/0 47 1 10 30 2 4 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0002t0002g0003 0/0 4 0 0 4 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0002t0002g0007 0/0 2 0 2 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0002t0002g0010 0/0 1 0 0 1 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0002t0002g0012 0/0 1 0 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0002t0009g0011 0/0 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0003t0001g0006 0/0 1 0 0 1 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0003t0006g0004 0/0 2 1 0 0 0 1 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0001c0003t0011g0004 0/0 1 1 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0002c0004t0002g0002 0/0 2 2 0 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
a0003c0005t0002g0002 0/0 1 0 1 0 0 0 TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00280 hp1 a0001 c0001 t0003 g0001 EUR FIN TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00280 hp2 a0001 c0001 t0003 g0001 EUR FIN TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00323 hp1 a0001 c0001 t0001 g0001 EUR FIN TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00323 hp2 a0001 c0001 t0003 g0001 EUR FIN TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00408 hp1 a0001 c0001 t0001 g0001 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00408 hp2 a0001 c0001 t0001 g0001 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00544 hp1 a0001 c0003 t0001 g0006 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00544 hp2 a0001 c0001 t0003 g0001 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00558 hp1 a0001 c0001 t0001 g0001 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00558 hp2 a0001 c0001 t0001 g0001 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00609 hp1 a0001 c0001 t0001 g0001 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00609 hp2 a0001 c0001 t0007 g0001 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00673 hp1 a0001 c0001 t0001 g0001 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00673 hp2 a0001 c0002 t0002 g0002 EAS CHS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00738 hp1 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG00738 hp2 a0003 c0005 t0002 g0002 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01069 hp1 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01069 hp2 a0001 c0001 t0003 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01070 hp1 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01070 hp2 a0001 c0002 t0002 g0002 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01081 hp1 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01081 hp2 a0001 c0002 t0002 g0002 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01099 hp1 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01099 hp2 a0001 c0002 t0002 g0002 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01167 hp1 a0001 c0002 t0002 g0002 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01167 hp2 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01168 hp1 a0001 c0002 t0002 g0002 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01168 hp2 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01175 hp1 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01175 hp2 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01192 hp1 a0001 c0001 t0001 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01192 hp2 a0001 c0002 t0002 g0007 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01243 hp1 a0001 c0002 t0002 g0012 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01243 hp2 a0001 c0001 t0003 g0001 AMR PUR TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01255 hp1 a0001 c0001 t0001 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01255 hp2 a0001 c0001 t0003 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01256 hp1 a0001 c0002 t0002 g0002 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01256 hp2 a0001 c0001 t0001 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01257 hp1 a0001 c0002 t0002 g0002 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01257 hp2 a0001 c0001 t0003 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01261 hp1 a0001 c0001 t0003 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01261 hp2 a0001 c0001 t0001 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01433 hp1 a0001 c0001 t0003 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01433 hp2 a0001 c0001 t0001 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01496 hp1 a0001 c0001 t0001 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01496 hp2 a0001 c0001 t0005 g0001 AMR CLM TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01515 hp1 a0001 c0001 t0001 g0001 EUR IBS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01515 hp2 a0001 c0002 t0002 g0002 EUR IBS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01517 hp1 a0001 c0002 t0002 g0002 EUR IBS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01517 hp2 a0001 c0001 t0003 g0001 EUR IBS TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01928 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01928 hp2 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01934 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01934 hp2 a0001 c0002 t0002 g0002 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01943 hp1 a0001 c0002 t0002 g0007 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01943 hp2 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01952 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01952 hp2 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01978 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01978 hp2 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01981 hp1 a0001 c0001 t0001 g0008 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01981 hp2 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01993 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG01993 hp2 a0001 c0001 t0001 g0005 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02004 hp1 a0001 c0002 t0002 g0002 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02004 hp2 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02040 hp1 a0001 c0002 t0002 g0002 EAS KHV TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02040 hp2 a0001 c0001 t0001 g0001 EAS KHV TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02083 hp1 a0001 c0001 t0001 g0001 EAS KHV TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02083 hp2 a0001 c0001 t0003 g0001 EAS KHV TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02148 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02148 hp2 a0001 c0001 t0001 g0005 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02165 hp1 a0001 c0001 t0001 g0001 EAS CDX TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02165 hp2 a0001 c0001 t0001 g0001 EAS CDX TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02257 hp1 a0002 c0004 t0002 g0002 AFR ACB TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02257 hp2 a0001 c0001 t0010 g0001 AFR ACB TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02273 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02273 hp2 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02293 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02293 hp2 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02300 hp1 a0001 c0001 t0001 g0001 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02300 hp2 a0001 c0002 t0002 g0002 AMR PEL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02523 hp1 a0001 c0002 t0002 g0002 EAS KHV TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02523 hp2 a0001 c0001 t0001 g0001 EAS KHV TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02647 hp1 a0001 c0003 t0006 g0004 AFR GWD TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02647 hp2 a0001 c0001 t0001 g0001 AFR GWD TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02738 hp1 a0001 c0002 t0002 g0002 SAS PJL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02738 hp2 a0001 c0001 t0004 g0001 SAS PJL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02896 hp1 a0001 c0002 t0002 g0002 AFR GWD TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG02896 hp2 a0001 c0001 t0005 g0001 AFR GWD TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03130 hp1 a0001 c0002 t0009 g0011 AFR ESN TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03130 hp2 a0001 c0001 t0001 g0001 AFR ESN TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03139 hp1 a0001 c0001 t0001 g0001 AFR ESN TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03139 hp2 a0002 c0004 t0002 g0002 AFR ESN TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03486 hp1 a0001 c0001 t0001 g0001 AFR MSL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03486 hp2 a0001 c0003 t0011 g0004 AFR MSL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03491 hp1 a0001 c0002 t0002 g0002 SAS PJL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03491 hp2 a0001 c0003 t0006 g0004 SAS PJL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03579 hp1 a0001 c0001 t0001 g0001 AFR MSL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03579 hp2 a0001 c0001 t0001 g0006 AFR MSL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03704 hp1 a0001 c0001 t0002 g0002 SAS PJL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03704 hp2 a0001 c0001 t0001 g0001 SAS PJL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03710 hp1 a0001 c0001 t0001 g0001 SAS PJL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03710 hp2 a0001 c0001 t0002 g0002 SAS PJL TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03831 hp1 a0001 c0002 t0002 g0002 SAS BEB TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG03831 hp2 a0001 c0001 t0001 g0001 SAS BEB TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG04228 hp1 a0001 c0001 t0008 g0001 SAS STU TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
HG04228 hp2 a0001 c0002 t0002 g0002 SAS STU TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18612 hp1 a0001 c0001 t0001 g0001 EAS CHB TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18612 hp2 a0001 c0001 t0001 g0001 EAS CHB TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18747 hp1 a0001 c0001 t0001 g0001 EAS CHB TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18747 hp2 a0001 c0001 t0001 g0001 EAS CHB TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18939 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18939 hp2 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18940 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18940 hp2 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18941 hp1 a0001 c0002 t0002 g0003 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18941 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18943 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18943 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18944 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18944 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18946 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18946 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18953 hp1 a0001 c0001 t0003 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18953 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18960 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18960 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18961 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18961 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18962 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18962 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18964 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18964 hp2 a0001 c0001 t0003 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18967 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18967 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18970 hp1 a0001 c0001 t0003 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18970 hp2 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18973 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18973 hp2 a0001 c0002 t0002 g0003 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18977 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18977 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18987 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18987 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18990 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18990 hp2 a0001 c0002 t0002 g0010 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18991 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18991 hp2 a0001 c0002 t0002 g0003 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18995 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18995 hp2 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19000 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19000 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19001 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19001 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19007 hp1 a0001 c0002 t0002 g0003 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19007 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19009 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19009 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19054 hp1 a0001 c0001 t0003 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19054 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19055 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19055 hp2 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19056 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19056 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19058 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19058 hp2 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19060 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19060 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19076 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19076 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19078 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19078 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19080 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19080 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19083 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19083 hp2 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19084 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19084 hp2 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19089 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19089 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19090 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19090 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19091 hp1 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA19091 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA20752 hp1 a0001 c0001 t0003 g0001 EUR TSI TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA20752 hp2 a0001 c0001 t0001 g0001 EUR TSI TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA20805 hp1 a0001 c0001 t0003 g0001 EUR TSI TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA20805 hp2 a0001 c0001 t0004 g0009 EUR TSI TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18955 hp1 a0001 c0002 t0002 g0002 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928
NA18955 hp2 a0001 c0001 t0001 g0001 EAS JPT TP53TG3D_chr16_32248286_32260928 TP53TG3D chr16 32248286 32260928

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr16:32253357 C
C
 T
T
 1 a0003
a0003
 1 HG00738.hp2
HG00738.hp2
 missense_variant MODERATE c.4C>T
c.4C>T
 p.Arg2Cys
p.Arg2Cys
 TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/2 72/1468 4/375 2/124 chr16 32253357
chr16:32253673 A
A
 G
G
 1 a0002
a0002
 2 HG02257.hp1
HG03139.hp2
HG02257.hp1
HG03139.hp2
 missense_variant MODERATE c.320A>G
c.320A>G
 p.Lys107Arg
p.Lys107Arg
 TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/2 388/1468 320/375 107/124 chr16 32253673

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr16:32253677 T
T
 C
C
 1 a0001c0003
a0001c0003
 4 HG00544.hp1
HG02647.hp1
HG03486.hp2
others(1): Show 
HG00544.hp1
HG02647.hp1
HG03486.hp2
HG03491.hp2
 synonymous_variant LOW c.324T>C
c.324T>C
 p.Gly108Gly
p.Gly108Gly
 TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/2 392/1468 324/375 108/124 chr16 32253677
chr16:32253701 G
G
 C
C
 3 a0001c0002
a0002c0004
a0003c0005
a0001c0002
a0002c0004
a0003c0005
 59 HG00673.hp2
HG00738.hp2
HG01070.hp2
others(56): Show 
HG00673.hp2
HG00738.hp2
HG01070.hp2
HG01081.hp2
HG01099.hp2
HG01167.hp1
HG01168.hp1
HG01192.hp2
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01515.hp2
HG01517.hp1
HG01934.hp2
HG01943.hp1
HG02004.hp1
HG02040.hp1
HG02257.hp1
HG02300.hp2
HG02523.hp1
HG02738.hp1
HG02896.hp1
HG03130.hp1
HG03139.hp2
HG03491.hp1
HG03831.hp1
HG04228.hp2
NA18939.hp2
NA18940.hp2
NA18941.hp1
NA18943.hp1
NA18944.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18970.hp2
NA18973.hp2
NA18977.hp1
NA18987.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18995.hp2
NA19000.hp1
NA19001.hp1
NA19007.hp1
NA19009.hp1
NA19055.hp2
NA19056.hp1
NA19058.hp2
NA19060.hp1
NA19076.hp1
NA19078.hp1
NA19080.hp1
NA19083.hp2
NA19084.hp2
NA19089.hp1
NA19090.hp1
 synonymous_variant LOW c.348G>C
c.348G>C
 p.Ala116Ala
p.Ala116Ala
 TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/2 416/1468 348/375 116/124 chr16 32253701

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr16:32255058 A
A
 G
G
 8 a0001c0001t0002
a0001c0001t0010
a0001c0002t0002
others(5): Show 
a0001c0001t0002
a0001c0001t0010
a0001c0002t0002
a0001c0002t0009
a0001c0003t0006
a0001c0003t0011
a0002c0004t0002
a0003c0005t0002
 65 HG00673.hp2
HG00738.hp2
HG01070.hp2
others(62): Show 
HG00673.hp2
HG00738.hp2
HG01070.hp2
HG01081.hp2
HG01099.hp2
HG01167.hp1
HG01168.hp1
HG01192.hp2
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01515.hp2
HG01517.hp1
HG01934.hp2
HG01943.hp1
HG02004.hp1
HG02040.hp1
HG02257.hp1
HG02257.hp2
HG02300.hp2
HG02523.hp1
HG02647.hp1
HG02738.hp1
HG02896.hp1
HG03130.hp1
HG03139.hp2
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03704.hp1
HG03710.hp2
HG03831.hp1
HG04228.hp2
NA18939.hp2
NA18940.hp2
NA18941.hp1
NA18943.hp1
NA18944.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18970.hp2
NA18973.hp2
NA18977.hp1
NA18987.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18995.hp2
NA19000.hp1
NA19001.hp1
NA19007.hp1
NA19009.hp1
NA19055.hp2
NA19056.hp1
NA19058.hp2
NA19060.hp1
NA19076.hp1
NA19078.hp1
NA19080.hp1
NA19083.hp2
NA19084.hp2
NA19089.hp1
NA19090.hp1
 3_prime_UTR_variant MODIFIER c.*155A>G
c.*155A>G
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 155 chr16 32255058
chr16:32255125 C
C
 T
T
 1 a0001c0001t0008
a0001c0001t0008
 1 HG04228.hp1
HG04228.hp1
 3_prime_UTR_variant MODIFIER c.*222C>T
c.*222C>T
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 222 chr16 32255125
chr16:32255145 A
A
 C
C
 7 a0001c0001t0002
a0001c0001t0007
a0001c0002t0002
others(4): Show 
a0001c0001t0002
a0001c0001t0007
a0001c0002t0002
a0001c0003t0006
a0001c0003t0011
a0002c0004t0002
a0003c0005t0002
 64 HG00609.hp2
HG00673.hp2
HG00738.hp2
others(61): Show 
HG00609.hp2
HG00673.hp2
HG00738.hp2
HG01070.hp2
HG01081.hp2
HG01099.hp2
HG01167.hp1
HG01168.hp1
HG01192.hp2
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01515.hp2
HG01517.hp1
HG01934.hp2
HG01943.hp1
HG02004.hp1
HG02040.hp1
HG02257.hp1
HG02300.hp2
HG02523.hp1
HG02647.hp1
HG02738.hp1
HG02896.hp1
HG03139.hp2
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03704.hp1
HG03710.hp2
HG03831.hp1
HG04228.hp2
NA18939.hp2
NA18940.hp2
NA18941.hp1
NA18943.hp1
NA18944.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18970.hp2
NA18973.hp2
NA18977.hp1
NA18987.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18995.hp2
NA19000.hp1
NA19001.hp1
NA19007.hp1
NA19009.hp1
NA19055.hp2
NA19056.hp1
NA19058.hp2
NA19060.hp1
NA19076.hp1
NA19078.hp1
NA19080.hp1
NA19083.hp2
NA19084.hp2
NA19089.hp1
NA19090.hp1
 3_prime_UTR_variant MODIFIER c.*242A>C
c.*242A>C
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 242 chr16 32255145
chr16:32255239 C
C
 T
T
 2 a0001c0003t0006
a0001c0003t0011
a0001c0003t0006
a0001c0003t0011
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 3_prime_UTR_variant MODIFIER c.*336C>T
c.*336C>T
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 336 chr16 32255239
chr16:32255240 A
A
 G
G
 2 a0001c0003t0006
a0001c0003t0011
a0001c0003t0006
a0001c0003t0011
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 3_prime_UTR_variant MODIFIER c.*337A>G
c.*337A>G
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 337 chr16 32255240
chr16:32255299 A
A
 C
C
 2 a0001c0001t0005
a0001c0001t0010
a0001c0001t0005
a0001c0001t0010
 3 HG01496.hp2
HG02257.hp2
HG02896.hp2
HG01496.hp2
HG02257.hp2
HG02896.hp2
 3_prime_UTR_variant MODIFIER c.*396A>C
c.*396A>C
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 396 chr16 32255299
chr16:32255301 T
T
 TA
TA
 6 a0001c0001t0002
a0001c0002t0002
a0001c0002t0009
others(3): Show 
a0001c0001t0002
a0001c0002t0002
a0001c0002t0009
a0001c0003t0011
a0002c0004t0002
a0003c0005t0002
 62 HG00673.hp2
HG00738.hp2
HG01070.hp2
others(59): Show 
HG00673.hp2
HG00738.hp2
HG01070.hp2
HG01081.hp2
HG01099.hp2
HG01167.hp1
HG01168.hp1
HG01192.hp2
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01515.hp2
HG01517.hp1
HG01934.hp2
HG01943.hp1
HG02004.hp1
HG02040.hp1
HG02257.hp1
HG02300.hp2
HG02523.hp1
HG02738.hp1
HG02896.hp1
HG03130.hp1
HG03139.hp2
HG03486.hp2
HG03491.hp1
HG03704.hp1
HG03710.hp2
HG03831.hp1
HG04228.hp2
NA18939.hp2
NA18940.hp2
NA18941.hp1
NA18943.hp1
NA18944.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18970.hp2
NA18973.hp2
NA18977.hp1
NA18987.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18995.hp2
NA19000.hp1
NA19001.hp1
NA19007.hp1
NA19009.hp1
NA19055.hp2
NA19056.hp1
NA19058.hp2
NA19060.hp1
NA19076.hp1
NA19078.hp1
NA19080.hp1
NA19083.hp2
NA19084.hp2
NA19089.hp1
NA19090.hp1
 3_prime_UTR_variant MODIFIER c.*409dupA
c.*409dupA
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 410 INFO_REALIGN_3_PRIME chr16 32255301
chr16:32255368 G
G
 C
C
 2 a0001c0003t0006
a0001c0003t0011
a0001c0003t0006
a0001c0003t0011
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 3_prime_UTR_variant MODIFIER c.*465G>C
c.*465G>C
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 465 chr16 32255368
chr16:32255558 A
A
 ACTT
ACTT
 2 a0001c0003t0006
a0001c0003t0011
a0001c0003t0006
a0001c0003t0011
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 3_prime_UTR_variant MODIFIER c.*656_*658dupCTT
c.*656_*658dupCTT
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 659 INFO_REALIGN_3_PRIME chr16 32255558
chr16:32255631 C
C
 T
T
 1 a0001c0001t0004
a0001c0001t0004
 2 HG02738.hp2
NA20805.hp2
HG02738.hp2
NA20805.hp2
 3_prime_UTR_variant MODIFIER c.*728C>T
c.*728C>T
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 728 chr16 32255631
chr16:32255639 C
C
 T
T
 2 a0001c0003t0006
a0001c0003t0011
a0001c0003t0006
a0001c0003t0011
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 3_prime_UTR_variant MODIFIER c.*736C>T
c.*736C>T
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 736 chr16 32255639
chr16:32255856 T
T
 C
C
 5 a0001c0001t0003
a0001c0001t0004
a0001c0001t0008
others(2): Show 
a0001c0001t0003
a0001c0001t0004
a0001c0001t0008
a0001c0003t0006
a0001c0003t0011
 24 HG00280.hp1
HG00280.hp2
HG00323.hp2
others(21): Show 
HG00280.hp1
HG00280.hp2
HG00323.hp2
HG00544.hp2
HG01069.hp2
HG01243.hp2
HG01255.hp2
HG01257.hp2
HG01261.hp1
HG01433.hp1
HG01517.hp2
HG02083.hp2
HG02647.hp1
HG02738.hp2
HG03486.hp2
HG03491.hp2
HG04228.hp1
NA18953.hp1
NA18964.hp2
NA18970.hp1
NA19054.hp1
NA20752.hp1
NA20805.hp1
NA20805.hp2
 3_prime_UTR_variant MODIFIER c.*953T>C
c.*953T>C
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 2/2 953 chr16 32255856

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr16:32253723 T
T
 G
G
 1 a0001c0001t0001g0005
a0001c0001t0001g0005
 2 HG01993.hp2
HG02148.hp2
HG01993.hp2
HG02148.hp2
 splice_region_variant&intron_variant LOW c.362+8T>G
c.362+8T>G
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32253723
chr16:32253746 G
G
 A
A
 4 a0001c0001t0001g0006
a0001c0003t0001g0006
a0001c0003t0006g0004
others(1): Show 
a0001c0001t0001g0006
a0001c0003t0001g0006
a0001c0003t0006g0004
a0001c0003t0011g0004
 5 HG00544.hp1
HG02647.hp1
HG03486.hp2
others(2): Show 
HG00544.hp1
HG02647.hp1
HG03486.hp2
HG03491.hp2
HG03579.hp2
 intron_variant MODIFIER c.362+31G>A
c.362+31G>A
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32253746
chr16:32253789 C
C
 G
G
 1 a0001c0002t0002g0007
a0001c0002t0002g0007
 2 HG01192.hp2
HG01943.hp1
HG01192.hp2
HG01943.hp1
 intron_variant MODIFIER c.362+74C>G
c.362+74C>G
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32253789
chr16:32253946 G
G
 C
C
 1 a0001c0001t0001g0008
a0001c0001t0001g0008
 1 HG01981.hp1
HG01981.hp1
 intron_variant MODIFIER c.362+231G>C
c.362+231G>C
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32253946
chr16:32254125 G
G
 C
C
 1 a0001c0001t0004g0009
a0001c0001t0004g0009
 1 NA20805.hp2
NA20805.hp2
 intron_variant MODIFIER c.362+410G>C
c.362+410G>C
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254125
chr16:32254158 G
G
 T
T
 1 a0001c0002t0002g0012
a0001c0002t0002g0012
 1 HG01243.hp1
HG01243.hp1
 intron_variant MODIFIER c.362+443G>T
c.362+443G>T
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254158
chr16:32254252 GCAGGTCT
others(1): Show 
GCAGGTCTC
 G
G
 2 a0001c0003t0006g0004
a0001c0003t0011g0004
a0001c0003t0006g0004
a0001c0003t0011g0004
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 intron_variant MODIFIER c.362+538_362+545del
others(8): Show 
c.362+538_362+545delCAGGTCTC
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254252
chr16:32254406 T
T
 C
C
 10 a0001c0001t0002g0002
a0001c0002t0002g0002
a0001c0002t0002g0003
others(7): Show 
a0001c0001t0002g0002
a0001c0002t0002g0002
a0001c0002t0002g0003
a0001c0002t0002g0007
a0001c0002t0002g0010
a0001c0002t0002g0012
a0001c0003t0006g0004
a0001c0003t0011g0004
a0002c0004t0002g0002
a0003c0005t0002g0002
 63 HG00673.hp2
HG00738.hp2
HG01070.hp2
others(60): Show 
HG00673.hp2
HG00738.hp2
HG01070.hp2
HG01081.hp2
HG01099.hp2
HG01167.hp1
HG01168.hp1
HG01192.hp2
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01515.hp2
HG01517.hp1
HG01934.hp2
HG01943.hp1
HG02004.hp1
HG02040.hp1
HG02257.hp1
HG02300.hp2
HG02523.hp1
HG02647.hp1
HG02738.hp1
HG02896.hp1
HG03139.hp2
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03704.hp1
HG03710.hp2
HG03831.hp1
HG04228.hp2
NA18939.hp2
NA18940.hp2
NA18941.hp1
NA18943.hp1
NA18944.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18970.hp2
NA18973.hp2
NA18977.hp1
NA18987.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18995.hp2
NA19000.hp1
NA19001.hp1
NA19007.hp1
NA19009.hp1
NA19055.hp2
NA19056.hp1
NA19058.hp2
NA19060.hp1
NA19076.hp1
NA19078.hp1
NA19080.hp1
NA19083.hp2
NA19084.hp2
NA19089.hp1
NA19090.hp1
 intron_variant MODIFIER c.363-485T>C
c.363-485T>C
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254406
chr16:32254423 T
T
 C
C
 2 a0001c0003t0006g0004
a0001c0003t0011g0004
a0001c0003t0006g0004
a0001c0003t0011g0004
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 intron_variant MODIFIER c.363-468T>C
c.363-468T>C
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254423
chr16:32254516 G
G
 A
A
 1 a0001c0002t0002g0003
a0001c0002t0002g0003
 4 NA18941.hp1
NA18973.hp2
NA18991.hp2
others(1): Show 
NA18941.hp1
NA18973.hp2
NA18991.hp2
NA19007.hp1
 intron_variant MODIFIER c.363-375G>A
c.363-375G>A
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254516
chr16:32254565 C
C
 T
T
 1 a0001c0002t0002g0010
a0001c0002t0002g0010
 1 NA18990.hp2
NA18990.hp2
 intron_variant MODIFIER c.363-326C>T
c.363-326C>T
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254565
chr16:32254582 A
A
 G
G
 2 a0001c0003t0006g0004
a0001c0003t0011g0004
a0001c0003t0006g0004
a0001c0003t0011g0004
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 intron_variant MODIFIER c.363-309A>G
c.363-309A>G
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254582
chr16:32254591 TG
TG
 T
T
 2 a0001c0003t0006g0004
a0001c0003t0011g0004
a0001c0003t0006g0004
a0001c0003t0011g0004
 3 HG02647.hp1
HG03486.hp2
HG03491.hp2
HG02647.hp1
HG03486.hp2
HG03491.hp2
 intron_variant MODIFIER c.363-297delG
c.363-297delG
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 INFO_REALIGN_3_PRIME chr16 32254591
chr16:32254670 C
C
 T
T
 1 a0001c0002t0002g0007
a0001c0002t0002g0007
 2 HG01192.hp2
HG01943.hp1
HG01192.hp2
HG01943.hp1
 intron_variant MODIFIER c.363-221C>T
c.363-221C>T
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 chr16 32254670
chr16:32254795 A
A
 ATACTT
ATACTT
 11 a0001c0001t0002g0002
a0001c0002t0002g0002
a0001c0002t0002g0003
others(8): Show 
a0001c0001t0002g0002
a0001c0002t0002g0002
a0001c0002t0002g0003
a0001c0002t0002g0007
a0001c0002t0002g0010
a0001c0002t0002g0012
a0001c0002t0009g0011
a0001c0003t0006g0004
a0001c0003t0011g0004
a0002c0004t0002g0002
a0003c0005t0002g0002
 64 HG00673.hp2
HG00738.hp2
HG01070.hp2
others(61): Show 
HG00673.hp2
HG00738.hp2
HG01070.hp2
HG01081.hp2
HG01099.hp2
HG01167.hp1
HG01168.hp1
HG01192.hp2
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01515.hp2
HG01517.hp1
HG01934.hp2
HG01943.hp1
HG02004.hp1
HG02040.hp1
HG02257.hp1
HG02300.hp2
HG02523.hp1
HG02647.hp1
HG02738.hp1
HG02896.hp1
HG03130.hp1
HG03139.hp2
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03704.hp1
HG03710.hp2
HG03831.hp1
HG04228.hp2
NA18939.hp2
NA18940.hp2
NA18941.hp1
NA18943.hp1
NA18944.hp1
NA18955.hp1
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18970.hp2
NA18973.hp2
NA18977.hp1
NA18987.hp1
NA18990.hp2
NA18991.hp1
NA18991.hp2
NA18995.hp2
NA19000.hp1
NA19001.hp1
NA19007.hp1
NA19009.hp1
NA19055.hp2
NA19056.hp1
NA19058.hp2
NA19060.hp1
NA19076.hp1
NA19078.hp1
NA19080.hp1
NA19083.hp2
NA19084.hp2
NA19089.hp1
NA19090.hp1
 intron_variant MODIFIER c.363-94_363-93insCT
others(3): Show 
c.363-94_363-93insCTTTA
TP53TG3D ENSG00000205456.12 transcript ENST00000398664.5 protein_coding 1/1 INFO_REALIGN_3_PRIME chr16 32254795

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

IGV Connection Help

IGV must be running on your computer before clicking the button.

If your browser shows the "cannot open the page" error, launch IGV and allow access via port 60151:

  1. Open IGV on your computer
  2. In IGV's menu bar: View → Preferences…
  3. Click on the "Advanced" tab
  4. Check "Enable port"
  5. Set the port number to 60151
  6. Click OK to save

For more details, please refer to Information → FAQ.