Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| geneid | 22829 |
|---|---|
| ensemblid | ENSG00000165246.15 |
| hgncid | 15529 |
| symbol | NLGN4Y |
| name | neuroligin 4 Y-linked |
| refseq_nuc | NM_001365588.1 |
| refseq_prot | NP_001352517.1 |
| ensembl_nuc | ENST00000684976.1 |
| ensembl_prot | ENSP00000510011.1 |
| mane_status | MANE Select |
| chr | chrY |
| start | 14524529 |
| end | 14845654 |
| strand | + |
| ver | v1.2 |
| region | chrY:14524529-14845654 |
| region5000 | chrY:14519529-14850654 |
| regionname0 | NLGN4Y_chrY_14524529_14845654 |
| regionname5000 | NLGN4Y_chrY_14519529_14850654 |
| chapid | grch38/chm13v2 | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| c0001 | 1/1 | 2511 | 118 | 18 | 20 | 58 | 5 | 15 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| c0002 | 0/0 | 2511 | 2 | 0 | 0 | 2 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| c0003 | 0/0 | 2511 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| thapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| t0001 | 1/1 | 4684 | 84 | 16 | 20 | 26 | 5 | 15 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| t0002 | 0/0 | 4684 | 33 | 0 | 0 | 33 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| t0003 | 0/0 | 4684 | 2 | 0 | 0 | 2 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| t0004 | 0/0 | 4688 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| t0005 | 0/0 | 4684 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| ghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| g0001 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0002 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0003 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0004 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0006 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0007 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0008 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0009 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0010 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0011 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0013 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0014 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0015 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0016 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0018 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0022 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0023 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0027 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0028 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0031 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0032 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0034 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0035 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0036 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0037 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0038 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0039 | 0/1 | 1 | 0 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0041 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0042 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0043 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0047 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0049 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0055 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0056 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0057 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0059 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0060 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0061 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0062 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0063 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0064 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0065 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0066 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0067 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0068 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0069 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0070 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0071 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0072 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0073 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0074 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0075 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0076 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0077 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0079 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0080 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0081 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0082 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0084 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0085 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0087 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0088 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0089 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0091 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0092 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0093 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0094 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0095 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0096 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0097 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0098 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0099 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0100 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0101 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0102 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0103 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0104 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0105 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0106 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0107 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0108 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0109 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0110 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0111 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0112 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0113 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0114 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0115 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0116 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0117 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0118 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0120 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| g0121 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| achapid | grch38/chm13v2 | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 2511 | 118 | 18 | 20 | 58 | 5 | 15 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| a0001c0002 | 0/0 | 2511 | 2 | 0 | 0 | 2 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| a0002c0003 | 0/0 | 2511 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/1 | 7194 | 81 | 16 | 20 | 23 | 5 | 15 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| a0001c0001t0002 | 0/0 | 7194 | 33 | 0 | 0 | 33 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| a0001c0001t0003 | 0/0 | 7194 | 2 | 0 | 0 | 2 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| a0001c0001t0004 | 0/0 | 7198 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| a0001c0001t0005 | 0/0 | 7194 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| a0001c0002t0001 | 0/0 | 7194 | 2 | 0 | 0 | 2 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| a0002c0003t0001 | 0/0 | 7194 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | copy fasta | chrY | 14519529 | 14850654 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0002 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0004 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0006 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0007 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0008 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0009 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0010 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0011 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0013 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0014 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0015 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0016 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0018 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0022 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0023 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0028 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0031 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0032 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0034 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0035 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0036 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0037 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0038 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0039 | 0/1 | 1 | 0 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0041 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0042 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0043 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0055 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0056 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0057 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0059 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0060 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0061 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0062 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0063 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0064 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0065 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0066 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0067 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0068 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0069 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0070 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0071 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0072 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0073 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0074 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0075 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0076 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0079 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0080 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0081 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0082 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0084 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0085 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0087 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0088 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0089 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0091 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0092 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0093 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0108 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0109 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0111 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0112 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0113 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0115 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0116 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0117 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0121 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0027 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0047 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0049 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0094 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0095 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0096 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0097 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0098 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0099 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0100 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0101 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0102 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0103 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0104 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0105 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0106 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0107 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0118 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0120 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0003g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0003g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0004g0114 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0005g0077 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0002t0001g0003 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0002t0001g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0002c0003t0001g0110 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00140 | hp1 | a0001 | c0001 | t0001 | g0036 | EUR | GBR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0080 | EUR | FIN | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00609 | hp1 | a0001 | c0001 | t0002 | g0046 | EAS | CHS | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00621 | hp1 | a0001 | c0001 | t0002 | g0050 | EAS | CHS | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00642 | hp1 | a0001 | c0001 | t0001 | g0056 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00673 | hp1 | a0001 | c0001 | t0002 | g0027 | EAS | CHS | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0061 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0030 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0032 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01099 | hp1 | a0001 | c0001 | t0001 | g0028 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01106 | hp1 | a0001 | c0001 | t0001 | g0057 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0035 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0112 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01192 | hp1 | a0001 | c0001 | t0001 | g0042 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01243 | hp1 | a0001 | c0001 | t0001 | g0073 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01255 | hp1 | a0001 | c0001 | t0001 | g0065 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01256 | hp1 | a0001 | c0001 | t0001 | g0064 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0063 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01261 | hp1 | a0001 | c0001 | t0001 | g0069 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0072 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0038 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0071 | EUR | IBS | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01928 | hp1 | a0001 | c0001 | t0001 | g0074 | AMR | PEL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01934 | hp1 | a0001 | c0001 | t0001 | g0070 | AMR | PEL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0058 | AMR | PEL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0062 | AMR | PEL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02015 | hp1 | a0001 | c0001 | t0002 | g0033 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02027 | hp1 | a0001 | c0001 | t0002 | g0053 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0021 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02055 | hp1 | a0001 | c0001 | t0001 | g0090 | AFR | ACB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02056 | hp1 | a0001 | c0001 | t0002 | g0078 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02071 | hp1 | a0001 | c0001 | t0002 | g0045 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02074 | hp1 | a0001 | c0001 | t0002 | g0024 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02083 | hp1 | a0001 | c0001 | t0003 | g0025 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02129 | hp1 | a0001 | c0001 | t0002 | g0120 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0022 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02135 | hp1 | a0001 | c0001 | t0002 | g0119 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02145 | hp1 | a0001 | c0001 | t0001 | g0083 | AFR | ACB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02258 | hp1 | a0001 | c0001 | t0001 | g0121 | AFR | ACB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0082 | AFR | GWD | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02602 | hp1 | a0001 | c0001 | t0001 | g0075 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02647 | hp1 | a0001 | c0001 | t0004 | g0114 | AFR | GWD | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02698 | hp1 | a0001 | c0001 | t0001 | g0113 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02717 | hp1 | a0001 | c0001 | t0001 | g0088 | AFR | GWD | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0055 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0068 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02895 | hp1 | a0001 | c0001 | t0001 | g0086 | AFR | GWD | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02965 | hp1 | a0001 | c0001 | t0001 | g0084 | AFR | ESN | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0079 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0117 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03130 | hp1 | a0001 | c0001 | t0001 | g0092 | AFR | ESN | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03139 | hp1 | a0001 | c0001 | t0001 | g0085 | AFR | ESN | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0087 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03225 | hp1 | a0001 | c0001 | t0005 | g0077 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0054 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03492 | hp1 | a0001 | c0001 | t0001 | g0066 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0037 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03654 | hp1 | a0001 | c0001 | t0001 | g0108 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0043 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0031 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG04115 | hp1 | a0001 | c0001 | t0001 | g0076 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0041 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0034 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0067 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0089 | AFR | YRI | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0111 | EAS | CHB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0081 | EAS | CHB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18940 | hp1 | a0001 | c0001 | t0001 | g0018 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18943 | hp1 | a0001 | c0001 | t0002 | g0103 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18945 | hp1 | a0001 | c0001 | t0002 | g0051 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18952 | hp1 | a0001 | c0001 | t0001 | g0016 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18953 | hp1 | a0001 | c0001 | t0002 | g0107 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18959 | hp1 | a0001 | c0001 | t0002 | g0029 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18960 | hp1 | a0001 | c0001 | t0001 | g0020 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0019 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18962 | hp1 | a0001 | c0001 | t0002 | g0094 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18965 | hp1 | a0001 | c0001 | t0002 | g0099 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18966 | hp1 | a0001 | c0001 | t0001 | g0017 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0013 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0115 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0116 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18977 | hp1 | a0001 | c0001 | t0002 | g0098 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18982 | hp1 | a0001 | c0001 | t0002 | g0047 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18983 | hp1 | a0001 | c0001 | t0001 | g0010 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18984 | hp1 | a0001 | c0001 | t0002 | g0044 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18986 | hp1 | a0001 | c0001 | t0002 | g0095 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18990 | hp1 | a0001 | c0001 | t0002 | g0105 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18994 | hp1 | a0001 | c0001 | t0002 | g0101 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18995 | hp1 | a0001 | c0002 | t0001 | g0005 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19000 | hp1 | a0001 | c0001 | t0002 | g0102 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19004 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19005 | hp1 | a0001 | c0001 | t0002 | g0097 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19007 | hp1 | a0001 | c0001 | t0002 | g0096 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19009 | hp1 | a0001 | c0001 | t0003 | g0026 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0023 | AFR | LWK | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19058 | hp1 | a0001 | c0001 | t0001 | g0014 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19060 | hp1 | a0001 | c0001 | t0002 | g0118 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19062 | hp1 | a0001 | c0001 | t0002 | g0048 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19063 | hp1 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19066 | hp1 | a0001 | c0001 | t0002 | g0106 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19070 | hp1 | a0001 | c0001 | t0002 | g0100 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19079 | hp1 | a0002 | c0003 | t0001 | g0110 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19082 | hp1 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19083 | hp1 | a0001 | c0001 | t0002 | g0040 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19085 | hp1 | a0001 | c0001 | t0002 | g0049 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19086 | hp1 | a0001 | c0001 | t0002 | g0052 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19088 | hp1 | a0001 | c0001 | t0002 | g0104 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19091 | hp1 | a0001 | c0001 | t0001 | g0109 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA20752 | hp1 | a0001 | c0001 | t0001 | g0059 | EUR | TSI | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | GIH | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02486 | hp1 | a0001 | c0001 | t0001 | g0091 | AFR | ACB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03471 | hp1 | a0001 | c0001 | t0001 | g0093 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| homoSapiens_chm13v2 | hp1 | a0001 | c0001 | t0001 | g0039 | REF | REF | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| homoSapiens_grch38 | hp1 | a0001 | c0001 | t0001 | g0060 | REF | REF | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:14622316
|
T | C | 1 | a0002 | 1 | NA19079.hp1 | missense_variant | MODERATE | c.197T>C | p.Ile66Thr | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/7 | 488/7194 | 197/2511 | 66/836 | chrY | 14622316 |
| chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:14723127
|
A | G | 1 | a0001c0002 | 2 | NA18995.hp1 NA19063.hp1 |
synonymous_variant | LOW | c.543A>G | p.Glu181Glu | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/7 | 834/7194 | 543/2511 | 181/836 | chrY | 14723127 |
| chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:14841746
|
A | G | 1 | a0001c0001t0005 | 1 | HG03225.hp1 | 3_prime_UTR_variant | MODIFIER | c.*484A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 7/7 | 484 | chrY | 14841746 | |||||
| chrY:14842230
|
A | T | 2 | a0001c0001t0002a0001c0001t0003 | 35 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(32): Show |
3_prime_UTR_variant | MODIFIER | c.*968A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 7/7 | 968 | chrY | 14842230 | |||||
| chrY:14842485
|
G | A | 1 | a0001c0001t0003 | 2 | HG02083.hp1 NA19009.hp1 |
3_prime_UTR_variant | MODIFIER | c.*1223G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 7/7 | 1223 | chrY | 14842485 | |||||
| chrY:14845174
|
T | TTAAG | 1 | a0001c0001t0004 | 1 | HG02647.hp1 | 3_prime_UTR_variant | MODIFIER | c.*3913_*3914insAAGT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 7/7 | 3914 | INFO_REALIGN_3_PRIME | chrY | 14845174 |
| chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:14524963
|
C | T | 1 | a0001c0001t0001g0121 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.-112+255C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14524963 | ||||||
| chrY:14525232
|
A | G | 2 | a0001c0001t0002g0119a0001c0001t0002g0120 | 2 | HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.-112+524A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14525232 | ||||||
| chrY:14526077
|
A | T | 1 | a0001c0001t0002g0118 | 1 | NA19060.hp1 | intron_variant | MODIFIER | c.-112+1369A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14526077 | ||||||
| chrY:14526275
|
G | C | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.-112+1567G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14526275 | ||||||
| chrY:14526436
|
C | CTG | 3 | a0001c0001t0001g0115a0001c0001t0001g0116a0001c0001t0001g0117 | 3 | HG03098.hp1 NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+1752_-112+175 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14526436 | |||||
| chrY:14526436
|
CTG | C | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-112+1752_-112+175 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14526436 | |||||
| chrY:14526578
|
T | TTG | 2 | a0001c0001t0001g0113a0001c0001t0004g0114 | 2 | HG02647.hp1 HG02698.hp1 |
intron_variant | MODIFIER | c.-112+1888_-112+188 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14526578 | |||||
| chrY:14526924
|
A | G | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+2216A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14526924 | ||||||
| chrY:14527109
|
T | C | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-112+2401T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14527109 | ||||||
| chrY:14527555
|
A | G | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-112+2847A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14527555 | ||||||
| chrY:14527902
|
TC | T | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.-112+3195delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14527902 | ||||||
| chrY:14528421
|
G | T | 15 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(12): Show | 15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.-112+3713G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14528421 | ||||||
| chrY:14528949
|
G | T | 15 | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0008others(12): Show | 15 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(12): Show |
intron_variant | MODIFIER | c.-112+4241G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14528949 | ||||||
| chrY:14529334
|
A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+4626A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14529334 | ||||||
| chrY:14529506
|
C | T | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-112+4798C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14529506 | ||||||
| chrY:14529651
|
T | TC | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.-112+4945dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14529651 | |||||
| chrY:14529992
|
C | CAT | 5 | a0001c0001t0001g0006a0001c0001t0001g0021a0001c0001t0001g0109others(2): Show | 5 | HG02040.hp1 NA18612.hp1 NA18944.hp1 others(2): Show |
intron_variant | MODIFIER | c.-112+5307_-112+530 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14529992 | |||||
| chrY:14529992
|
CATAT | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+5305_-112+530 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14529992 | |||||
| chrY:14530630
|
G | C | 2 | a0001c0001t0001g0022a0001c0001t0001g0113 | 2 | HG02132.hp1 HG02698.hp1 |
intron_variant | MODIFIER | c.-112+5922G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14530630 | ||||||
| chrY:14531367
|
T | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-112+6659T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14531367 | ||||||
| chrY:14531394
|
A | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+6686A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14531394 | ||||||
| chrY:14532367
|
A | T | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-112+7659A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14532367 | ||||||
| chrY:14532446
|
C | G | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.-112+7738C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14532446 | ||||||
| chrY:14532570
|
T | C | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-112+7862T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14532570 | ||||||
| chrY:14533243
|
C | CT | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+8544dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14533243 | |||||
| chrY:14533322
|
C | T | 2 | a0001c0001t0001g0080a0001c0001t0001g0081 | 2 | HG00280.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-112+8614C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14533322 | ||||||
| chrY:14533713
|
G | C | 3 | a0001c0001t0002g0024a0001c0001t0003g0025a0001c0001t0003g0026 | 3 | HG02074.hp1 HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.-112+9005G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14533713 | ||||||
| chrY:14533778
|
G | T | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-112+9070G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14533778 | ||||||
| chrY:14534179
|
C | A | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-112+9471C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14534179 | ||||||
| chrY:14534215
|
G | A | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-112+9507G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14534215 | ||||||
| chrY:14534316
|
C | T | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-112+9608C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14534316 | ||||||
| chrY:14534768
|
C | CGT | 58 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0021others(55): Show | 58 | HG00140.hp1 HG00609.hp1 HG00621.hp1 others(55): Show |
intron_variant | MODIFIER | c.-112+10097_-112+10 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | |||||
| chrY:14534768
|
C | CGTGT | 9 | a0001c0001t0001g0004a0001c0001t0001g0019a0001c0001t0001g0028others(6): Show | 9 | HG00280.hp1 HG01099.hp1 HG02074.hp1 others(6): Show |
intron_variant | MODIFIER | c.-112+10095_-112+10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | |||||
| chrY:14534768
|
C | CGTGTGT | 7 | a0001c0001t0001g0015a0001c0001t0001g0016a0001c0001t0001g0017others(4): Show | 7 | HG01167.hp1 NA18940.hp1 NA18952.hp1 others(4): Show |
intron_variant | MODIFIER | c.-112+10093_-112+10 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | |||||
| chrY:14534768
|
C | CGTGTGTG others(1): Show |
9 | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0008others(6): Show | 9 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(6): Show |
intron_variant | MODIFIER | c.-112+10091_-112+10 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | |||||
| chrY:14534768
|
CGT | C | 2 | a0001c0001t0002g0078a0001c0001t0005g0077 | 2 | HG02056.hp1 HG03225.hp1 |
intron_variant | MODIFIER | c.-112+10097_-112+10 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | |||||
| chrY:14534768
|
CGTGT | C | 5 | a0001c0001t0001g0108a0001c0001t0001g0109a0001c0001t0001g0115others(2): Show | 5 | HG03654.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.-112+10095_-112+10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | |||||
| chrY:14534768
|
CGTGTGTG others(1): Show |
C | 1 | a0001c0001t0001g0111 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.-112+10091_-112+10 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | |||||
| chrY:14534806
|
T | TGTG | 1 | a0001c0001t0002g0027 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.-112+10098_-112+10 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14534806 | ||||||
| chrY:14535427
|
A | C | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.-112+10719A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14535427 | ||||||
| chrY:14535930
|
GATTTATT others(15): Show |
G | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-112+11224_-112+11 others(28): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14535930 | |||||
| chrY:14536177
|
A | G | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-112+11469A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14536177 | ||||||
| chrY:14536235
|
G | GT | 35 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0008others(32): Show | 35 | HG00280.hp1 HG01192.hp1 HG01243.hp1 others(32): Show |
intron_variant | MODIFIER | c.-112+11556dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14536235 | |||||
| chrY:14536235
|
G | GTT | 18 | a0001c0001t0001g0013a0001c0001t0001g0014a0001c0001t0001g0018others(15): Show | 18 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(15): Show |
intron_variant | MODIFIER | c.-112+11555_-112+11 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14536235 | |||||
| chrY:14536235
|
G | GTTT | 2 | a0001c0001t0002g0052a0001c0001t0002g0053 | 2 | HG02027.hp1 NA19086.hp1 |
intron_variant | MODIFIER | c.-112+11554_-112+11 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14536235 | |||||
| chrY:14536235
|
GT | G | 12 | a0001c0001t0001g0023a0001c0001t0001g0030a0001c0001t0001g0054others(9): Show | 12 | HG01069.hp1 HG02486.hp1 HG02717.hp1 others(9): Show |
intron_variant | MODIFIER | c.-112+11556delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14536235 | |||||
| chrY:14536784
|
C | G | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.-112+12076C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14536784 | ||||||
| chrY:14537600
|
C | A | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+12892C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14537600 | ||||||
| chrY:14539152
|
G | A | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.-112+14444G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14539152 | ||||||
| chrY:14539553
|
C | CT | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-112+14861dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14539553 | |||||
| chrY:14539553
|
CT | C | 2 | a0001c0001t0001g0054a0001c0001t0001g0055 | 2 | HG02735.hp1 HG03490.hp1 |
intron_variant | MODIFIER | c.-112+14861delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14539553 | |||||
| chrY:14540099
|
G | GGT | 4 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0023others(1): Show | 4 | HG02735.hp1 NA19043.hp1 NA20805.hp1 others(1): Show |
intron_variant | MODIFIER | c.-112+15415_-112+15 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14540099 | |||||
| chrY:14540124
|
G | GT | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.-112+15416_-112+15 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14540124 | ||||||
| chrY:14540134
|
C | CG | 2 | a0001c0001t0001g0043a0001c0001t0001g0116 | 2 | HG03688.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+15434dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14540134 | |||||
| chrY:14540138
|
G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-112+15430G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14540138 | ||||||
| chrY:14540804
|
C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-112+16096C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14540804 | ||||||
| chrY:14541082
|
A | G | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-112+16374A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14541082 | ||||||
| chrY:14543106
|
TATGTACC others(5): Show |
T | 1 | a0001c0001t0002g0027 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.-112+18404_-112+18 others(18): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14543106 | |||||
| chrY:14544139
|
G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-112+19431G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14544139 | ||||||
| chrY:14544244
|
C | G | 1 | a0001c0001t0001g0035 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.-112+19536C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14544244 | ||||||
| chrY:14544271
|
C | T | 1 | a0001c0001t0002g0120 | 1 | HG02129.hp1 | intron_variant | MODIFIER | c.-112+19563C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14544271 | ||||||
| chrY:14544778
|
C | CT | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.-112+20084dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14544778 | |||||
| chrY:14544778
|
C | CTT | 2 | a0001c0001t0001g0069a0001c0001t0001g0070 | 2 | HG01261.hp1 HG01934.hp1 |
intron_variant | MODIFIER | c.-112+20083_-112+20 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14544778 | |||||
| chrY:14544931
|
T | TC | 1 | a0001c0001t0002g0078 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.-112+20229dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14544931 | |||||
| chrY:14545535
|
T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+20827T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14545535 | ||||||
| chrY:14545724
|
G | C | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.-112+21016G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14545724 | ||||||
| chrY:14546095
|
G | A | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-112+21387G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14546095 | ||||||
| chrY:14546096
|
G | A | 3 | a0001c0001t0001g0030a0001c0001t0001g0038a0001c0001t0001g0039 | 3 | HG01069.hp1 HG01433.hp1 homoSapiens_chm13v2.hp1 |
intron_variant | MODIFIER | c.-112+21388G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14546096 | ||||||
| chrY:14546362
|
T | C | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.-112+21654T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14546362 | ||||||
| chrY:14546442
|
T | C | 1 | a0001c0001t0002g0045 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.-112+21734T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14546442 | ||||||
| chrY:14547230
|
G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-112+22522G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14547230 | ||||||
| chrY:14547489
|
C | T | 7 | a0001c0001t0001g0034a0001c0001t0001g0054a0001c0001t0001g0066others(4): Show | 7 | HG02602.hp1 HG02738.hp1 HG03490.hp1 others(4): Show |
intron_variant | MODIFIER | c.-112+22781C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14547489 | ||||||
| chrY:14548000
|
G | A | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.-112+23292G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14548000 | ||||||
| chrY:14548481
|
A | C | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+23773A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14548481 | ||||||
| chrY:14549116
|
TC | T | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-112+24411delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14549116 | |||||
| chrY:14549227
|
T | G | 43 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(40): Show | 43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.-112+24519T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14549227 | ||||||
| chrY:14549674
|
G | T | 2 | a0001c0001t0001g0007a0001c0001t0001g0018 | 2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.-112+24966G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14549674 | ||||||
| chrY:14549763
|
G | C | 5 | a0001c0001t0001g0007a0001c0001t0001g0015a0001c0001t0001g0016others(2): Show | 5 | NA18940.hp1 NA18952.hp1 NA18961.hp1 others(2): Show |
intron_variant | MODIFIER | c.-112+25055G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14549763 | ||||||
| chrY:14549784
|
G | GC | 43 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(40): Show | 43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.-112+25076_-112+25 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14549784 | ||||||
| chrY:14550306
|
TC | T | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.-112+25604delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14550306 | |||||
| chrY:14550671
|
A | G | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-112+25963A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14550671 | ||||||
| chrY:14551411
|
T | TC | 1 | a0001c0001t0003g0026 | 1 | NA19009.hp1 | intron_variant | MODIFIER | c.-112+26704dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14551411 | |||||
| chrY:14551847
|
C | T | 1 | a0001c0001t0002g0051 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.-112+27139C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14551847 | ||||||
| chrY:14552123
|
G | A | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-112+27415G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14552123 | ||||||
| chrY:14552841
|
T | C | 1 | a0001c0001t0001g0006 | 1 | NA18944.hp1 | intron_variant | MODIFIER | c.-112+28133T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14552841 | ||||||
| chrY:14553130
|
A | G | 3 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065 | 3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.-112+28422A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14553130 | ||||||
| chrY:14553566
|
C | CTG | 14 | a0001c0001t0001g0022a0001c0001t0001g0030a0001c0001t0001g0036others(11): Show | 14 | HG00140.hp1 HG01069.hp1 HG01255.hp1 others(11): Show |
intron_variant | MODIFIER | c.-112+28892_-112+28 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | |||||
| chrY:14553566
|
C | CTGTGTG | 2 | a0001c0001t0001g0032a0001c0001t0001g0035 | 2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.-112+28888_-112+28 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | |||||
| chrY:14553566
|
C | CTGTGTGT others(1): Show |
1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-112+28886_-112+28 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | |||||
| chrY:14553566
|
CTG | C | 9 | a0001c0001t0001g0020a0001c0001t0001g0028a0001c0001t0001g0031others(6): Show | 9 | HG01099.hp1 HG01106.hp1 HG02071.hp1 others(6): Show |
intron_variant | MODIFIER | c.-112+28892_-112+28 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | |||||
| chrY:14553566
|
CTGTG | C | 6 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0055others(3): Show | 6 | HG00609.hp1 HG02572.hp1 HG02735.hp1 others(3): Show |
intron_variant | MODIFIER | c.-112+28890_-112+28 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | |||||
| chrY:14553646
|
ATATAT | A | 2 | a0001c0001t0001g0080a0001c0001t0001g0081 | 2 | HG00280.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-112+28951_-112+28 others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553646 | |||||
| chrY:14553661
|
TTAA | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+28955_-112+28 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553661 | |||||
| chrY:14554199
|
A | AT | 62 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(59): Show | 62 | HG00609.hp1 HG00621.hp1 HG00642.hp1 others(59): Show |
intron_variant | MODIFIER | c.-112+29516dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14554199 | |||||
| chrY:14554199
|
A | ATT | 8 | a0001c0001t0001g0012a0001c0001t0001g0088a0001c0001t0001g0093others(5): Show | 8 | HG02717.hp1 HG03471.hp1 NA18953.hp1 others(5): Show |
intron_variant | MODIFIER | c.-112+29515_-112+29 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14554199 | |||||
| chrY:14554199
|
A | ATTTTTTT others(24): Show |
1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+29516_-112+29 others(37): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14554199 | |||||
| chrY:14554199
|
AT | A | 8 | a0001c0001t0001g0021a0001c0001t0001g0038a0001c0001t0001g0039others(5): Show | 8 | HG01433.hp1 HG01515.hp1 HG01943.hp1 others(5): Show |
intron_variant | MODIFIER | c.-112+29516delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14554199 | |||||
| chrY:14557602
|
G | T | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.-112+32894G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14557602 | ||||||
| chrY:14558447
|
T | A | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.-112+33739T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14558447 | ||||||
| chrY:14558653
|
ACACT | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-112+33949_-112+33 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14558653 | |||||
| chrY:14558823
|
C | T | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+34115C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14558823 | ||||||
| chrY:14559132
|
A | G | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.-112+34424A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14559132 | ||||||
| chrY:14559478
|
C | A | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+34770C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14559478 | ||||||
| chrY:14559827
|
G | A | 2 | a0001c0001t0002g0029a0001c0001t0002g0078 | 2 | HG02056.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.-112+35119G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14559827 | ||||||
| chrY:14561004
|
A | AT | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+36301dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14561004 | |||||
| chrY:14561512
|
A | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+36804A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14561512 | ||||||
| chrY:14561760
|
A | G | 1 | a0001c0001t0002g0047 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.-112+37052A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14561760 | ||||||
| chrY:14562040
|
G | GT | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+37335dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14562040 | |||||
| chrY:14562330
|
TC | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+37626delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14562330 | |||||
| chrY:14562455
|
C | CT | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+37749dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14562455 | |||||
| chrY:14562680
|
A | G | 8 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0030others(5): Show | 8 | HG00140.hp1 HG01069.hp1 HG01167.hp1 others(5): Show |
intron_variant | MODIFIER | c.-112+37972A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14562680 | ||||||
| chrY:14562857
|
C | T | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-112+38149C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14562857 | ||||||
| chrY:14562858
|
G | A | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+38150G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14562858 | ||||||
| chrY:14563107
|
A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-112+38399A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14563107 | ||||||
| chrY:14563159
|
A | C | 1 | a0001c0001t0001g0055 | 1 | HG02735.hp1 | intron_variant | MODIFIER | c.-112+38451A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14563159 | ||||||
| chrY:14563498
|
GT | G | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+38793delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14563498 | |||||
| chrY:14564131
|
T | C | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-112+39423T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564131 | ||||||
| chrY:14564295
|
AG | A | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.-112+39593delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14564295 | |||||
| chrY:14564470
|
G | C | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.-112+39762G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564470 | ||||||
| chrY:14564684
|
C | T | 5 | a0001c0001t0002g0048a0001c0001t0002g0049a0001c0001t0002g0050others(2): Show | 5 | HG00621.hp1 NA18945.hp1 NA19062.hp1 others(2): Show |
intron_variant | MODIFIER | c.-112+39976C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564684 | ||||||
| chrY:14564882
|
C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+40174C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564882 | ||||||
| chrY:14564996
|
T | A | 2 | a0001c0001t0001g0062a0001c0001t0001g0074 | 2 | HG01928.hp1 HG01952.hp1 |
intron_variant | MODIFIER | c.-112+40288T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564996 | ||||||
| chrY:14565073
|
C | T | 1 | a0001c0001t0002g0106 | 1 | NA19066.hp1 | intron_variant | MODIFIER | c.-112+40365C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14565073 | ||||||
| chrY:14565330
|
C | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-112+40622C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14565330 | ||||||
| chrY:14565445
|
A | G | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-112+40737A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14565445 | ||||||
| chrY:14565727
|
C | A | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.-112+41019C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14565727 | ||||||
| chrY:14565852
|
T | TG | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.-112+41151dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14565852 | |||||
| chrY:14566697
|
CCCCAAAT others(96): Show |
C | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-112+42050_-112+42 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14566697 | |||||
| chrY:14566827
|
C | A | 15 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(12): Show | 15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.-112+42119C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14566827 | ||||||
| chrY:14567219
|
A | AT | 14 | a0001c0001t0001g0011a0001c0001t0001g0041a0001c0001t0001g0061others(11): Show | 14 | HG00280.hp1 HG00738.hp1 HG01934.hp1 others(11): Show |
intron_variant | MODIFIER | c.-112+42536dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567219 | |||||
| chrY:14567219
|
A | ATT | 2 | a0001c0001t0002g0029a0001c0001t0002g0078 | 2 | HG02056.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.-112+42535_-112+42 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567219 | |||||
| chrY:14567219
|
AT | A | 6 | a0001c0001t0001g0030a0001c0001t0001g0115a0001c0001t0002g0048others(3): Show | 6 | HG00621.hp1 HG01069.hp1 NA18971.hp1 others(3): Show |
intron_variant | MODIFIER | c.-112+42536delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567219 | |||||
| chrY:14567361
|
T | A | 3 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057 | 3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.-112+42653T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14567361 | ||||||
| chrY:14567524
|
A | AT | 3 | a0001c0001t0001g0004a0001c0001t0001g0032a0001c0001t0001g0035 | 3 | HG01074.hp1 HG01109.hp1 NA19004.hp1 |
intron_variant | MODIFIER | c.-112+42834dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567524 | |||||
| chrY:14567524
|
AT | A | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.-112+42834delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567524 | |||||
| chrY:14567710
|
AT | A | 98 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(95): Show | 98 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(95): Show |
intron_variant | MODIFIER | c.-112+43009delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567710 | |||||
| chrY:14567982
|
T | A | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.-112+43274T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14567982 | ||||||
| chrY:14568144
|
C | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.-112+43436C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14568144 | ||||||
| chrY:14568167
|
A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.-112+43459A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14568167 | ||||||
| chrY:14568770
|
AT | A | 1 | a0001c0001t0002g0048 | 1 | NA19062.hp1 | intron_variant | MODIFIER | c.-112+44070delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14568770 | |||||
| chrY:14568772
|
T | A | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-112+44064T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14568772 | ||||||
| chrY:14569709
|
A | G | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+45001A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14569709 | ||||||
| chrY:14569785
|
G | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+45077G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14569785 | ||||||
| chrY:14570287
|
C | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+45579C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14570287 | ||||||
| chrY:14570970
|
G | A | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+46262G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14570970 | ||||||
| chrY:14571568
|
A | G | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.-112+46860A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14571568 | ||||||
| chrY:14571917
|
A | G | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47209A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14571917 | ||||||
| chrY:14572098
|
C | T | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47390C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572098 | ||||||
| chrY:14572099
|
A | G | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.-112+47391A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572099 | ||||||
| chrY:14572145
|
A | G | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47437A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572145 | ||||||
| chrY:14572183
|
C | T | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47475C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572183 | ||||||
| chrY:14572222
|
G | A | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47514G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572222 | ||||||
| chrY:14572742
|
G | C | 3 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057 | 3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.-112+48034G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572742 | ||||||
| chrY:14572953
|
G | A | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-112+48245G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572953 | ||||||
| chrY:14573284
|
G | C | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-112+48576G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14573284 | ||||||
| chrY:14573682
|
T | A | 1 | a0001c0001t0003g0026 | 1 | NA19009.hp1 | intron_variant | MODIFIER | c.-111-48327T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14573682 | ||||||
| chrY:14573877
|
G | C | 3 | a0001c0001t0001g0084a0001c0001t0001g0085a0001c0001t0001g0091 | 3 | HG02486.hp1 HG02965.hp1 HG03139.hp1 |
intron_variant | MODIFIER | c.-111-48132G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14573877 | ||||||
| chrY:14574372
|
T | A | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-111-47637T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14574372 | ||||||
| chrY:14574583
|
G | T | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.-111-47426G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14574583 | ||||||
| chrY:14575085
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-46924G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14575085 | ||||||
| chrY:14575696
|
G | GT | 1 | a0001c0001t0002g0101 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.-111-46306dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14575696 | |||||
| chrY:14575993
|
GC | G | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-111-46012delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14575993 | |||||
| chrY:14576354
|
G | A | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-111-45655G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14576354 | ||||||
| chrY:14576678
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-45331G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14576678 | ||||||
| chrY:14578131
|
G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-111-43878G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14578131 | ||||||
| chrY:14578220
|
GATA | G | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-111-43777_-111-43 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14578220 | |||||
| chrY:14578640
|
C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-43369C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14578640 | ||||||
| chrY:14578900
|
C | T | 43 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(40): Show | 43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.-111-43109C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14578900 | ||||||
| chrY:14578904
|
T | G | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.-111-43105T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14578904 | ||||||
| chrY:14579942
|
G | T | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-111-42067G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14579942 | ||||||
| chrY:14580148
|
C | T | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-111-41861C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14580148 | ||||||
| chrY:14580227
|
G | GAAAAAAA others(7): Show |
19 | a0001c0001t0001g0028a0001c0001t0001g0037a0001c0001t0001g0038others(16): Show | 19 | HG00621.hp1 HG01099.hp1 HG01433.hp1 others(16): Show |
intron_variant | MODIFIER | c.-111-41773_-111-41 others(20): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580227 | |||||
| chrY:14580237
|
C | CA | 1 | a0001c0001t0001g0061 | 1 | HG00738.hp1 | intron_variant | MODIFIER | c.-111-41744dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580237 | |||||
| chrY:14580237
|
C | CAAAAAAA others(8): Show |
3 | a0001c0001t0001g0031a0001c0001t0002g0040a0001c0001t0002g0052 | 3 | HG03710.hp1 NA19083.hp1 NA19086.hp1 |
intron_variant | MODIFIER | c.-111-41760_-111-41 others(21): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580237 | |||||
| chrY:14580237
|
CA | C | 3 | a0001c0001t0001g0068a0001c0001t0001g0071a0001c0001t0001g0075 | 3 | HG01515.hp1 HG02602.hp1 HG02738.hp1 |
intron_variant | MODIFIER | c.-111-41744delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580237 | |||||
| chrY:14580237
|
CAA | C | 6 | a0001c0001t0001g0034a0001c0001t0001g0054a0001c0001t0001g0056others(3): Show | 6 | HG00642.hp1 HG03490.hp1 HG03492.hp1 others(3): Show |
intron_variant | MODIFIER | c.-111-41745_-111-41 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580237 | |||||
| chrY:14580238
|
A | AAAAAAAA others(6): Show |
57 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0019others(54): Show | 57 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(54): Show |
intron_variant | MODIFIER | c.-111-41760_-111-41 others(19): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580238 | |||||
| chrY:14580239
|
A | AAAAAAAA others(5): Show |
25 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(22): Show | 25 | HG03017.hp1 NA18612.hp1 NA18940.hp1 others(22): Show |
intron_variant | MODIFIER | c.-111-41760_-111-41 others(18): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580239 | |||||
| chrY:14580532
|
G | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-41477G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14580532 | ||||||
| chrY:14580802
|
G | T | 2 | a0001c0001t0001g0080a0001c0001t0001g0081 | 2 | HG00280.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-111-41207G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14580802 | ||||||
| chrY:14580877
|
G | GA | 27 | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0013others(24): Show | 27 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(24): Show |
intron_variant | MODIFIER | c.-111-41105dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | |||||
| chrY:14580877
|
G | GAA | 4 | a0001c0001t0001g0007a0001c0001t0001g0042a0001c0001t0001g0083others(1): Show | 4 | HG01192.hp1 HG02145.hp1 NA18994.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-41106_-111-41 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | |||||
| chrY:14580877
|
G | GAAA | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.-111-41107_-111-41 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | |||||
| chrY:14580877
|
GA | G | 5 | a0001c0001t0001g0011a0001c0001t0001g0030a0001c0001t0001g0055others(2): Show | 5 | HG01069.hp1 HG02698.hp1 HG02735.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-41105delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | |||||
| chrY:14580877
|
GAAAAAAA | G | 4 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037others(1): Show | 4 | HG01099.hp1 HG03579.hp1 HG03688.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-41111_-111-41 others(13): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | |||||
| chrY:14580877
|
GAAAAAAA others(1): Show |
G | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.-111-41112_-111-41 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | |||||
| chrY:14581377
|
C | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-40632C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14581377 | ||||||
| chrY:14582518
|
T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-39491T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14582518 | ||||||
| chrY:14582721
|
T | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-39288T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14582721 | ||||||
| chrY:14583229
|
T | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-38780T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14583229 | ||||||
| chrY:14583872
|
T | C | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-38137T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14583872 | ||||||
| chrY:14584329
|
T | G | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.-111-37680T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14584329 | ||||||
| chrY:14584828
|
G | A | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.-111-37181G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14584828 | ||||||
| chrY:14586287
|
A | C | 1 | a0001c0001t0001g0086 | 1 | HG02895.hp1 | intron_variant | MODIFIER | c.-111-35722A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586287 | ||||||
| chrY:14586588
|
C | T | 3 | a0001c0001t0001g0004a0001c0002t0001g0003a0001c0002t0001g0005 | 3 | NA18995.hp1 NA19004.hp1 NA19063.hp1 |
intron_variant | MODIFIER | c.-111-35421C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586588 | ||||||
| chrY:14586600
|
C | T | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-111-35409C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586600 | ||||||
| chrY:14586601
|
G | A | 2 | a0001c0001t0001g0023a0001c0001t0005g0077 | 2 | HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.-111-35408G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586601 | ||||||
| chrY:14586657
|
G | A | 1 | a0001c0001t0001g0015 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.-111-35352G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586657 | ||||||
| chrY:14587955
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-34054G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14587955 | ||||||
| chrY:14588233
|
C | G | 1 | a0001c0001t0001g0089 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.-111-33776C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14588233 | ||||||
| chrY:14588415
|
T | C | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-111-33594T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14588415 | ||||||
| chrY:14588745
|
G | A | 2 | a0001c0001t0001g0001a0001c0001t0001g0055 | 2 | HG02735.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.-111-33264G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14588745 | ||||||
| chrY:14588967
|
T | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-111-33042T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14588967 | ||||||
| chrY:14589441
|
G | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-32568G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589441 | ||||||
| chrY:14589646
|
A | C | 8 | a0001c0001t0001g0006a0001c0001t0001g0008a0001c0001t0001g0009others(5): Show | 8 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(5): Show |
intron_variant | MODIFIER | c.-111-32363A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589646 | ||||||
| chrY:14589738
|
C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-32271C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589738 | ||||||
| chrY:14589819
|
C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-111-32190C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589819 | ||||||
| chrY:14589927
|
G | C | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.-111-32082G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589927 | ||||||
| chrY:14589958
|
A | G | 1 | a0001c0001t0001g0030 | 1 | HG01069.hp1 | intron_variant | MODIFIER | c.-111-32051A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589958 | ||||||
| chrY:14590025
|
G | A | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-111-31984G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14590025 | ||||||
| chrY:14590089
|
G | A | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-111-31920G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14590089 | ||||||
| chrY:14590138
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-31871G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14590138 | ||||||
| chrY:14590159
|
T | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-31850T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14590159 | ||||||
| chrY:14591612
|
T | A | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-111-30397T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14591612 | ||||||
| chrY:14592015
|
G | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.-111-29994G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14592015 | ||||||
| chrY:14593036
|
G | A | 2 | a0001c0001t0001g0030a0001c0001t0001g0038 | 2 | HG01069.hp1 HG01433.hp1 |
intron_variant | MODIFIER | c.-111-28973G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593036 | ||||||
| chrY:14593398
|
T | C | 1 | a0001c0001t0001g0004 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.-111-28611T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593398 | ||||||
| chrY:14593664
|
A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.-111-28345A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593664 | ||||||
| chrY:14593882
|
G | A | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.-111-28127G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593882 | ||||||
| chrY:14593971
|
A | T | 4 | a0001c0001t0002g0027a0001c0001t0002g0045a0001c0001t0002g0119others(1): Show | 4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-28038A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593971 | ||||||
| chrY:14594059
|
CTCAGA | C | 3 | a0001c0001t0001g0004a0001c0002t0001g0003a0001c0002t0001g0005 | 3 | NA18995.hp1 NA19004.hp1 NA19063.hp1 |
intron_variant | MODIFIER | c.-111-27948_-111-27 others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14594059 | |||||
| chrY:14594896
|
G | A | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-111-27113G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14594896 | ||||||
| chrY:14595180
|
G | A | 1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.-111-26829G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14595180 | ||||||
| chrY:14595181
|
G | T | 1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.-111-26828G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14595181 | ||||||
| chrY:14595751
|
C | T | 15 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(12): Show | 15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.-111-26258C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14595751 | ||||||
| chrY:14596444
|
A | C | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-111-25565A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14596444 | ||||||
| chrY:14596494
|
C | T | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-111-25515C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14596494 | ||||||
| chrY:14596618
|
G | A | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-111-25391G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14596618 | ||||||
| chrY:14596811
|
C | T | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.-111-25198C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14596811 | ||||||
| chrY:14597190
|
C | T | 1 | a0001c0001t0003g0025 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-111-24819C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597190 | ||||||
| chrY:14597452
|
C | A | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.-111-24557C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597452 | ||||||
| chrY:14597584
|
C | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-24425C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597584 | ||||||
| chrY:14597629
|
A | G | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-111-24380A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597629 | ||||||
| chrY:14597851
|
T | C | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24158T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597851 | ||||||
| chrY:14597858
|
A | G | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24151A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597858 | ||||||
| chrY:14597859
|
C | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24150C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597859 | ||||||
| chrY:14597876
|
G | A | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24133G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597876 | ||||||
| chrY:14597896
|
T | G | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24113T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597896 | ||||||
| chrY:14597898
|
C | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24111C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597898 | ||||||
| chrY:14597907
|
C | A | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24102C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597907 | ||||||
| chrY:14597910
|
T | TCA | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24098_-111-24 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14597910 | |||||
| chrY:14598270
|
G | A | 1 | a0001c0001t0002g0027 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.-111-23739G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598270 | ||||||
| chrY:14598390
|
G | A | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.-111-23619G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598390 | ||||||
| chrY:14598397
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-23612G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598397 | ||||||
| chrY:14598479
|
C | T | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-111-23530C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598479 | ||||||
| chrY:14598548
|
C | A | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-111-23461C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598548 | ||||||
| chrY:14598713
|
C | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-23296C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598713 | ||||||
| chrY:14598715
|
A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-23294A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598715 | ||||||
| chrY:14598849
|
AG | A | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.-111-23157delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598849 | |||||
| chrY:14598883
|
G | GTA | 48 | a0001c0001t0001g0021a0001c0001t0001g0023a0001c0001t0001g0034others(45): Show | 48 | HG01243.hp1 HG02040.hp1 HG02055.hp1 others(45): Show |
intron_variant | MODIFIER | c.-111-23098_-111-23 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598883 | |||||
| chrY:14598883
|
G | GTATA | 5 | a0001c0001t0001g0039a0001c0001t0001g0042a0001c0001t0001g0075others(2): Show | 5 | HG01192.hp1 HG02015.hp1 HG02602.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-23100_-111-23 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598883 | |||||
| chrY:14598883
|
G | GTATATA | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-111-23102_-111-23 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598883 | |||||
| chrY:14598883
|
GTATATA | G | 3 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065 | 3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.-111-23102_-111-23 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598883 | |||||
| chrY:14598956
|
G | C | 1 | a0001c0001t0001g0038 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.-111-23053G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598956 | ||||||
| chrY:14599229
|
T | C | 1 | a0001c0001t0001g0058 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.-111-22780T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14599229 | ||||||
| chrY:14600068
|
C | T | 2 | a0001c0001t0001g0007a0001c0001t0001g0018 | 2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.-111-21941C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14600068 | ||||||
| chrY:14600082
|
C | T | 2 | a0001c0001t0001g0023a0001c0001t0005g0077 | 2 | HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.-111-21927C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14600082 | ||||||
| chrY:14600167
|
C | G | 2 | a0001c0001t0001g0032a0001c0001t0001g0035 | 2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.-111-21842C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14600167 | ||||||
| chrY:14601278
|
G | GT | 3 | a0001c0001t0001g0002a0001c0001t0001g0043a0001c0001t0001g0068 | 3 | HG02738.hp1 HG03688.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.-111-20722dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14601278 | |||||
| chrY:14601407
|
A | G | 98 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(95): Show | 98 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(95): Show |
intron_variant | MODIFIER | c.-111-20602A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14601407 | ||||||
| chrY:14601438
|
G | T | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-111-20571G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14601438 | ||||||
| chrY:14601480
|
A | G | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.-111-20529A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14601480 | ||||||
| chrY:14601571
|
A | G | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-111-20438A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14601571 | ||||||
| chrY:14602805
|
G | A | 2 | a0001c0001t0001g0080a0001c0001t0001g0081 | 2 | HG00280.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-111-19204G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14602805 | ||||||
| chrY:14603154
|
G | GGT | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-18836_-111-18 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14603154 | |||||
| chrY:14603435
|
G | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-18574G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14603435 | ||||||
| chrY:14604239
|
C | A | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.-111-17770C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14604239 | ||||||
| chrY:14604270
|
G | A | 1 | a0001c0001t0001g0037 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.-111-17739G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14604270 | ||||||
| chrY:14604880
|
C | G | 1 | a0001c0001t0002g0050 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.-111-17129C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14604880 | ||||||
| chrY:14605095
|
T | C | 1 | a0001c0001t0001g0043 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.-111-16914T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14605095 | ||||||
| chrY:14606135
|
A | G | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-111-15874A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14606135 | ||||||
| chrY:14606746
|
AT | A | 120 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(117): Show | 120 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(117): Show |
intron_variant | MODIFIER | c.-111-15254delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14606746 | |||||
| chrY:14606814
|
T | C | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-15195T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14606814 | ||||||
| chrY:14606840
|
T | C | 103 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(100): Show | 103 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(100): Show |
intron_variant | MODIFIER | c.-111-15169T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14606840 | ||||||
| chrY:14607013
|
C | T | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.-111-14996C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14607013 | ||||||
| chrY:14607814
|
C | T | 1 | a0001c0001t0003g0026 | 1 | NA19009.hp1 | intron_variant | MODIFIER | c.-111-14195C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14607814 | ||||||
| chrY:14607992
|
G | A | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-111-14017G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14607992 | ||||||
| chrY:14608133
|
T | C | 119 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(116): Show | 119 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(116): Show |
intron_variant | MODIFIER | c.-111-13876T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14608133 | ||||||
| chrY:14609476
|
T | G | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-111-12533T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14609476 | ||||||
| chrY:14609760
|
A | G | 1 | a0001c0001t0001g0081 | 1 | NA18747.hp1 | intron_variant | MODIFIER | c.-111-12249A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14609760 | ||||||
| chrY:14611389
|
TTC | T | 2 | a0001c0001t0001g0092a0001c0001t0001g0111 | 2 | HG03130.hp1 NA18612.hp1 |
intron_variant | MODIFIER | c.-111-10618_-111-10 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611389 | |||||
| chrY:14611390
|
TC | T | 40 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(37): Show | 40 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(37): Show |
intron_variant | MODIFIER | c.-111-10618delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14611390 | ||||||
| chrY:14611391
|
C | CT | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.-111-10605dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611391 | |||||
| chrY:14611391
|
C | T | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.-111-10618C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14611391 | ||||||
| chrY:14611391
|
CT | C | 3 | a0001c0001t0001g0041a0001c0001t0001g0043a0001c0001t0001g0081 | 3 | HG03688.hp1 HG04199.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-111-10605delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611391 | |||||
| chrY:14611443
|
C | T | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.-111-10566C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14611443 | ||||||
| chrY:14611541
|
C | CTGTT | 4 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0002g0024others(1): Show | 4 | HG02074.hp1 NA18612.hp1 NA19079.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-10454_-111-10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611541 | |||||
| chrY:14611555
|
G | GTTTA | 5 | a0001c0001t0001g0031a0001c0001t0001g0036a0001c0001t0001g0115others(2): Show | 5 | HG00140.hp1 HG02071.hp1 HG03710.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-10418_-111-10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611555 | |||||
| chrY:14611555
|
GTTTA | G | 14 | a0001c0001t0001g0022a0001c0001t0001g0023a0001c0001t0001g0056others(11): Show | 14 | HG00642.hp1 HG01167.hp1 HG01928.hp1 others(11): Show |
intron_variant | MODIFIER | c.-111-10418_-111-10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611555 | |||||
| chrY:14611559
|
A | G | 1 | a0001c0001t0002g0105 | 1 | NA18990.hp1 | intron_variant | MODIFIER | c.-111-10450A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14611559 | ||||||
| chrY:14612221
|
A | G | 5 | a0001c0001t0002g0048a0001c0001t0002g0049a0001c0001t0002g0050others(2): Show | 5 | HG00621.hp1 NA18945.hp1 NA19062.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-9788A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14612221 | ||||||
| chrY:14612368
|
G | A | 16 | a0001c0001t0002g0027a0001c0001t0002g0029a0001c0001t0002g0040others(13): Show | 16 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(13): Show |
intron_variant | MODIFIER | c.-111-9641G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14612368 | ||||||
| chrY:14612376
|
T | C | 1 | a0001c0001t0001g0035 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.-111-9633T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14612376 | ||||||
| chrY:14613282
|
C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-111-8727C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14613282 | ||||||
| chrY:14613653
|
T | G | 1 | a0001c0001t0002g0029 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.-111-8356T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14613653 | ||||||
| chrY:14614401
|
G | A | 5 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0001g0115others(2): Show | 5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-7608G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14614401 | ||||||
| chrY:14614737
|
A | G | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-111-7272A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14614737 | ||||||
| chrY:14614957
|
G | T | 103 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(100): Show | 103 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(100): Show |
intron_variant | MODIFIER | c.-111-7052G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14614957 | ||||||
| chrY:14615001
|
G | A | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.-111-7008G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14615001 | ||||||
| chrY:14615218
|
C | T | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.-111-6791C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14615218 | ||||||
| chrY:14615694
|
A | G | 1 | a0001c0001t0003g0025 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-111-6315A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14615694 | ||||||
| chrY:14616081
|
CT | C | 1 | a0001c0001t0001g0109 | 1 | NA19091.hp1 | intron_variant | MODIFIER | c.-111-5921delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14616081 | |||||
| chrY:14616088
|
TG | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-5919delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14616088 | |||||
| chrY:14616328
|
TTC | T | 5 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0001g0115others(2): Show | 5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-5675_-111-567 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14616328 | |||||
| chrY:14616981
|
G | A | 1 | a0001c0001t0002g0096 | 1 | NA19007.hp1 | intron_variant | MODIFIER | c.-111-5028G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14616981 | ||||||
| chrY:14617159
|
GC | G | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-111-4849delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14617159 | ||||||
| chrY:14617274
|
TTTC | T | 6 | a0001c0001t0001g0030a0001c0001t0001g0038a0001c0001t0001g0039others(3): Show | 6 | HG01069.hp1 HG01255.hp1 HG01256.hp1 others(3): Show |
intron_variant | MODIFIER | c.-111-4723_-111-472 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14617274 | |||||
| chrY:14617292
|
G | GT | 24 | a0001c0001t0001g0004a0001c0001t0001g0009a0001c0001t0001g0013others(21): Show | 24 | HG00280.hp1 HG01099.hp1 HG01192.hp1 others(21): Show |
intron_variant | MODIFIER | c.-111-4695dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14617292 | |||||
| chrY:14617292
|
G | GTT | 1 | a0001c0001t0001g0037 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.-111-4696_-111-469 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14617292 | |||||
| chrY:14617292
|
GT | G | 8 | a0001c0001t0001g0030a0001c0001t0001g0038a0001c0001t0001g0039others(5): Show | 8 | HG00738.hp1 HG01069.hp1 HG01167.hp1 others(5): Show |
intron_variant | MODIFIER | c.-111-4695delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14617292 | |||||
| chrY:14618098
|
G | T | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.-111-3911G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14618098 | ||||||
| chrY:14618123
|
G | GA | 3 | a0001c0001t0001g0018a0001c0001t0002g0029a0001c0001t0002g0078 | 3 | HG02056.hp1 NA18940.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.-111-3869dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14618123 | |||||
| chrY:14618123
|
G | GAA | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-111-3870_-111-386 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14618123 | |||||
| chrY:14618123
|
GA | G | 1 | a0001c0001t0002g0099 | 1 | NA18965.hp1 | intron_variant | MODIFIER | c.-111-3869delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14618123 | |||||
| chrY:14619785
|
C | T | 43 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(40): Show | 43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.-111-2224C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14619785 | ||||||
| chrY:14620424
|
AT | A | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.-111-1582delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14620424 | |||||
| chrY:14620886
|
C | CT | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.-111-1122dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14620886 | |||||
| chrY:14620957
|
AC | A | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.-111-1049delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14620957 | |||||
| chrY:14621081
|
G | GT | 4 | a0001c0001t0002g0027a0001c0001t0002g0045a0001c0001t0002g0119others(1): Show | 4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-914dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14621081 | |||||
| chrY:14621081
|
GT | G | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.-111-914delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14621081 | |||||
| chrY:14621173
|
G | A | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-111-836G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621173 | ||||||
| chrY:14621323
|
A | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.-111-686A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621323 | ||||||
| chrY:14621697
|
G | A | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-111-312G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621697 | ||||||
| chrY:14621836
|
C | A | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.-111-173C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621836 | ||||||
| chrY:14621876
|
A | C | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.-111-133A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621876 | ||||||
| chrY:14621906
|
A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-103A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621906 | ||||||
| chrY:14623582
|
G | T | 4 | a0001c0001t0001g0022a0001c0001t0001g0062a0001c0001t0001g0074others(1): Show | 4 | HG01928.hp1 HG01952.hp1 HG02132.hp1 others(1): Show |
intron_variant | MODIFIER | c.472+991G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14623582 | ||||||
| chrY:14624588
|
G | A | 1 | a0001c0001t0002g0107 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.472+1997G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14624588 | ||||||
| chrY:14624747
|
C | T | 1 | a0001c0001t0002g0105 | 1 | NA18990.hp1 | intron_variant | MODIFIER | c.472+2156C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14624747 | ||||||
| chrY:14624936
|
C | G | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.472+2345C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14624936 | ||||||
| chrY:14625456
|
G | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.472+2865G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14625456 | ||||||
| chrY:14625512
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+2921G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14625512 | ||||||
| chrY:14625867
|
A | C | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.472+3276A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14625867 | ||||||
| chrY:14626156
|
C | T | 1 | a0001c0001t0001g0034 | 1 | HG04204.hp1 | intron_variant | MODIFIER | c.472+3565C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14626156 | ||||||
| chrY:14626691
|
TGCTGATT others(17): Show |
T | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.472+4118_472+4141d others(26): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14626691 | |||||
| chrY:14626714
|
G | T | 3 | a0001c0001t0002g0045a0001c0001t0002g0119a0001c0001t0002g0120 | 3 | HG02071.hp1 HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.472+4123G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14626714 | ||||||
| chrY:14626854
|
C | G | 1 | a0001c0001t0001g0028 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.472+4263C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14626854 | ||||||
| chrY:14627028
|
CA | C | 120 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(117): Show | 120 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(117): Show |
intron_variant | MODIFIER | c.472+4444delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14627028 | |||||
| chrY:14627189
|
G | GA | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.472+4615dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14627189 | |||||
| chrY:14627189
|
GA | G | 1 | a0001c0001t0002g0099 | 1 | NA18965.hp1 | intron_variant | MODIFIER | c.472+4615delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14627189 | |||||
| chrY:14627358
|
G | A | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.472+4767G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14627358 | ||||||
| chrY:14627795
|
C | T | 2 | a0001c0001t0001g0001a0001c0001t0001g0055 | 2 | HG02735.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.472+5204C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14627795 | ||||||
| chrY:14628358
|
G | A | 1 | a0001c0001t0002g0046 | 1 | HG00609.hp1 | intron_variant | MODIFIER | c.472+5767G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14628358 | ||||||
| chrY:14629037
|
T | G | 1 | a0001c0001t0001g0043 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.472+6446T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14629037 | ||||||
| chrY:14629102
|
T | A | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.472+6511T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14629102 | ||||||
| chrY:14629576
|
C | A | 1 | a0001c0001t0001g0006 | 1 | NA18944.hp1 | intron_variant | MODIFIER | c.472+6985C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14629576 | ||||||
| chrY:14630344
|
G | A | 104 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(101): Show | 104 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(101): Show |
intron_variant | MODIFIER | c.472+7753G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14630344 | ||||||
| chrY:14630912
|
A | C | 1 | a0001c0001t0001g0076 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.472+8321A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14630912 | ||||||
| chrY:14631111
|
G | C | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.472+8520G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14631111 | ||||||
| chrY:14631209
|
G | T | 1 | a0001c0001t0002g0100 | 1 | NA19070.hp1 | intron_variant | MODIFIER | c.472+8618G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14631209 | ||||||
| chrY:14631414
|
T | C | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.472+8823T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14631414 | ||||||
| chrY:14632629
|
G | A | 2 | a0001c0001t0001g0032a0001c0001t0001g0035 | 2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.472+10038G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14632629 | ||||||
| chrY:14635562
|
T | TTTTA | 14 | a0001c0001t0001g0002a0001c0001t0001g0032a0001c0001t0001g0034others(11): Show | 14 | HG00140.hp1 HG01074.hp1 HG01109.hp1 others(11): Show |
intron_variant | MODIFIER | c.472+13011_472+1301 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14635562 | |||||
| chrY:14635562
|
T | TTTTATTT others(1): Show |
1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.472+13007_472+1301 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14635562 | |||||
| chrY:14635562
|
TTTTA | T | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.472+13011_472+1301 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14635562 | |||||
| chrY:14635847
|
C | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.472+13256C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14635847 | ||||||
| chrY:14636115
|
T | G | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.472+13524T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14636115 | ||||||
| chrY:14636446
|
C | A | 2 | a0001c0001t0002g0046a0001c0001t0002g0047 | 2 | HG00609.hp1 NA18982.hp1 |
intron_variant | MODIFIER | c.472+13855C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14636446 | ||||||
| chrY:14636755
|
G | T | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.472+14164G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14636755 | ||||||
| chrY:14637187
|
G | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.472+14596G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637187 | ||||||
| chrY:14637845
|
G | GT | 5 | a0001c0001t0001g0018a0001c0001t0001g0031a0001c0001t0001g0076others(2): Show | 5 | HG02056.hp1 HG02717.hp1 HG03710.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+15270dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637845 | |||||
| chrY:14637845
|
GT | G | 3 | a0001c0001t0001g0023a0001c0001t0001g0043a0001c0001t0004g0114 | 3 | HG02647.hp1 HG03688.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+15270delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637845 | |||||
| chrY:14637845
|
GTT | G | 2 | a0001c0001t0001g0081a0001c0001t0005g0077 | 2 | HG03225.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.472+15269_472+1527 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637845 | |||||
| chrY:14637858
|
T | G | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.472+15267T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637858 | ||||||
| chrY:14637858
|
T | TTG | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.472+15268_472+1526 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637858 | |||||
| chrY:14637860
|
T | G | 11 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0030others(8): Show | 11 | HG01069.hp1 HG01256.hp1 HG01258.hp1 others(8): Show |
intron_variant | MODIFIER | c.472+15269T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637860 | ||||||
| chrY:14637860
|
T | TG | 1 | a0001c0001t0001g0065 | 1 | HG01255.hp1 | intron_variant | MODIFIER | c.472+15269_472+1527 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637860 | ||||||
| chrY:14637860
|
T | TTG | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.472+15292_472+1529 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637860 | |||||
| chrY:14637862
|
G | T | 8 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037others(5): Show | 8 | HG00609.hp1 HG01099.hp1 HG02015.hp1 others(5): Show |
intron_variant | MODIFIER | c.472+15271G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637862 | ||||||
| chrY:14638447
|
T | A | 1 | a0001c0001t0002g0051 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.472+15856T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14638447 | ||||||
| chrY:14638975
|
G | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+16384G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14638975 | ||||||
| chrY:14639115
|
C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+16524C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639115 | ||||||
| chrY:14639120
|
C | T | 2 | a0001c0001t0001g0036a0001c0001t0001g0112 | 2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.472+16529C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639120 | ||||||
| chrY:14639121
|
G | A | 16 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(13): Show | 16 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(13): Show |
intron_variant | MODIFIER | c.472+16530G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639121 | ||||||
| chrY:14639624
|
G | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+17033G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639624 | ||||||
| chrY:14639847
|
A | G | 5 | a0001c0001t0002g0048a0001c0001t0002g0049a0001c0001t0002g0050others(2): Show | 5 | HG00621.hp1 NA18945.hp1 NA19062.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+17256A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639847 | ||||||
| chrY:14639945
|
A | G | 113 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(110): Show | 113 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(110): Show |
intron_variant | MODIFIER | c.472+17354A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639945 | ||||||
| chrY:14640468
|
G | T | 1 | a0001c0001t0001g0028 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.472+17877G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14640468 | ||||||
| chrY:14641014
|
A | G | 1 | a0001c0001t0001g0039 | 1 | homoSapiens_chm13v2.hp1 | intron_variant | MODIFIER | c.472+18423A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14641014 | ||||||
| chrY:14641317
|
A | G | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.472+18726A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14641317 | ||||||
| chrY:14641970
|
G | A | 2 | a0001c0001t0001g0084a0001c0001t0001g0091 | 2 | HG02486.hp1 HG02965.hp1 |
intron_variant | MODIFIER | c.472+19379G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14641970 | ||||||
| chrY:14643360
|
A | G | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.472+20769A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14643360 | ||||||
| chrY:14643383
|
A | G | 1 | a0001c0001t0002g0047 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.472+20792A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14643383 | ||||||
| chrY:14644890
|
A | G | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.472+22299A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14644890 | ||||||
| chrY:14645163
|
A | AT | 28 | a0001c0001t0001g0019a0001c0001t0001g0031a0001c0001t0001g0032others(25): Show | 28 | HG00140.hp1 HG01074.hp1 HG01106.hp1 others(25): Show |
intron_variant | MODIFIER | c.472+22599dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14645163 | |||||
| chrY:14645163
|
A | ATT | 4 | a0001c0001t0001g0035a0001c0001t0001g0083a0001c0001t0001g0085others(1): Show | 4 | HG01109.hp1 HG02145.hp1 HG03098.hp1 others(1): Show |
intron_variant | MODIFIER | c.472+22598_472+2259 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14645163 | |||||
| chrY:14645163
|
A | ATTTTTT | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+22594_472+2259 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14645163 | |||||
| chrY:14645163
|
AT | A | 2 | a0001c0001t0001g0023a0001c0001t0001g0080 | 2 | HG00280.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+22599delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14645163 | |||||
| chrY:14645207
|
C | T | 15 | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0008others(12): Show | 15 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(12): Show |
intron_variant | MODIFIER | c.472+22616C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14645207 | ||||||
| chrY:14645216
|
A | C | 1 | a0001c0001t0001g0093 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.472+22625A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14645216 | ||||||
| chrY:14646020
|
C | T | 5 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0001g0115others(2): Show | 5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+23429C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14646020 | ||||||
| chrY:14646318
|
C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+23727C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14646318 | ||||||
| chrY:14647500
|
T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+24909T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14647500 | ||||||
| chrY:14647652
|
CA | C | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.472+25066delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14647652 | |||||
| chrY:14648215
|
G | A | 1 | a0001c0001t0001g0088 | 1 | HG02717.hp1 | intron_variant | MODIFIER | c.472+25624G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14648215 | ||||||
| chrY:14648357
|
G | A | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.472+25766G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14648357 | ||||||
| chrY:14649004
|
C | CA | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.472+26429dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14649004 | |||||
| chrY:14649004
|
CA | C | 2 | a0001c0001t0001g0023a0001c0001t0002g0029 | 2 | NA18959.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+26429delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14649004 | |||||
| chrY:14649031
|
C | A | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.472+26440C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14649031 | ||||||
| chrY:14649037
|
C | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+26446C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14649037 | ||||||
| chrY:14649625
|
A | T | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.472+27034A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14649625 | ||||||
| chrY:14650571
|
C | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+27980C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14650571 | ||||||
| chrY:14652775
|
T | C | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.472+30184T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14652775 | ||||||
| chrY:14653040
|
G | GTA | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.472+30461_472+3046 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14653040 | |||||
| chrY:14653251
|
C | CGT | 17 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(14): Show | 17 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(14): Show |
intron_variant | MODIFIER | c.472+30673_472+3067 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14653251 | |||||
| chrY:14653264
|
G | GTA | 1 | a0001c0001t0002g0050 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.472+30685_472+3068 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14653264 | |||||
| chrY:14653536
|
T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+30945T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14653536 | ||||||
| chrY:14653751
|
C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+31160C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14653751 | ||||||
| chrY:14654511
|
CT | C | 1 | a0001c0001t0002g0104 | 1 | NA19088.hp1 | intron_variant | MODIFIER | c.472+31931delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14654511 | |||||
| chrY:14654587
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+31996G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14654587 | ||||||
| chrY:14654618
|
A | AT | 5 | a0001c0001t0001g0007a0001c0001t0001g0015a0001c0001t0001g0016others(2): Show | 5 | NA18940.hp1 NA18952.hp1 NA18961.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+32035dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14654618 | |||||
| chrY:14655111
|
A | AC | 3 | a0001c0001t0001g0013a0001c0001t0001g0035a0001c0001t0002g0027 | 3 | HG00673.hp1 HG01109.hp1 NA18967.hp1 |
intron_variant | MODIFIER | c.472+32524dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14655111 | |||||
| chrY:14655273
|
C | CT | 2 | a0001c0001t0001g0037a0001c0001t0001g0058 | 2 | HG01943.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.472+32699dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14655273 | |||||
| chrY:14655273
|
CT | C | 3 | a0001c0001t0001g0018a0001c0001t0001g0028a0001c0001t0002g0033 | 3 | HG01099.hp1 HG02015.hp1 NA18940.hp1 |
intron_variant | MODIFIER | c.472+32699delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14655273 | |||||
| chrY:14655508
|
G | A | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.472+32917G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14655508 | ||||||
| chrY:14656624
|
A | C | 29 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0015others(26): Show | 29 | HG01069.hp1 HG01099.hp1 HG01192.hp1 others(26): Show |
intron_variant | MODIFIER | c.472+34033A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14656624 | ||||||
| chrY:14656671
|
G | C | 1 | a0001c0001t0001g0015 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.472+34080G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14656671 | ||||||
| chrY:14656721
|
C | CT | 3 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065 | 3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.472+34147dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14656721 | |||||
| chrY:14656721
|
CT | C | 16 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0083others(13): Show | 16 | HG01099.hp1 HG01167.hp1 HG02015.hp1 others(13): Show |
intron_variant | MODIFIER | c.472+34147delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14656721 | |||||
| chrY:14656955
|
C | T | 5 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0001g0115others(2): Show | 5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+34364C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14656955 | ||||||
| chrY:14656971
|
T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+34380T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14656971 | ||||||
| chrY:14657049
|
T | C | 43 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(40): Show | 43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.472+34458T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14657049 | ||||||
| chrY:14657702
|
G | A | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.472+35111G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14657702 | ||||||
| chrY:14657721
|
C | CT | 98 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(95): Show | 98 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(95): Show |
intron_variant | MODIFIER | c.472+35130_472+3513 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14657721 | ||||||
| chrY:14658066
|
G | A | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.472+35475G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14658066 | ||||||
| chrY:14658283
|
A | T | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.472+35692A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14658283 | ||||||
| chrY:14658327
|
A | G | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+35736A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14658327 | ||||||
| chrY:14660263
|
G | T | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.472+37672G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14660263 | ||||||
| chrY:14660555
|
A | AT | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.472+37981dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14660555 | |||||
| chrY:14661990
|
G | A | 111 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(108): Show | 111 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(108): Show |
intron_variant | MODIFIER | c.472+39399G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14661990 | ||||||
| chrY:14662230
|
G | GTC | 43 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(40): Show | 43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.472+39641_472+3964 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14662230 | |||||
| chrY:14662345
|
TTATC | T | 4 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065others(1): Show | 4 | HG01255.hp1 HG01256.hp1 HG01258.hp1 others(1): Show |
intron_variant | MODIFIER | c.472+39774_472+3977 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14662345 | |||||
| chrY:14662717
|
G | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+40126G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14662717 | ||||||
| chrY:14663127
|
C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.472+40536C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14663127 | ||||||
| chrY:14663454
|
A | G | 1 | a0001c0001t0002g0097 | 1 | NA19005.hp1 | intron_variant | MODIFIER | c.472+40863A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14663454 | ||||||
| chrY:14663851
|
G | GT | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.472+41266dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14663851 | |||||
| chrY:14664708
|
T | C | 1 | a0001c0001t0002g0050 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.472+42117T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14664708 | ||||||
| chrY:14665025
|
A | AT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+42438dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665025 | |||||
| chrY:14665131
|
T | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+42540T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14665131 | ||||||
| chrY:14665246
|
A | AT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+42658dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665246 | |||||
| chrY:14665455
|
C | T | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.472+42864C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14665455 | ||||||
| chrY:14665534
|
A | AT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+42946dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665534 | |||||
| chrY:14665730
|
AG | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43142delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665730 | |||||
| chrY:14665754
|
TG | T | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43165delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665754 | |||||
| chrY:14665767
|
AG | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43180delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665767 | |||||
| chrY:14666078
|
T | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43487T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14666078 | ||||||
| chrY:14666305
|
TG | T | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43717delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14666305 | |||||
| chrY:14666314
|
G | A | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.472+43723G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14666314 | ||||||
| chrY:14666431
|
AT | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43843delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14666431 | |||||
| chrY:14666548
|
GC | G | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43959delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14666548 | |||||
| chrY:14666569
|
AT | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43985delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14666569 | |||||
| chrY:14667127
|
G | GA | 102 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(99): Show | 102 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(99): Show |
intron_variant | MODIFIER | c.472+44546dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14667127 | |||||
| chrY:14667317
|
TA | T | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+44729delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14667317 | |||||
| chrY:14667415
|
A | AC | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+44829dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14667415 | |||||
| chrY:14667415
|
A | C | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+44824A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14667415 | ||||||
| chrY:14667421
|
A | C | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.472+44830A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14667421 | ||||||
| chrY:14668060
|
C | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.472+45469C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668060 | ||||||
| chrY:14668103
|
T | TG | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+45514dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14668103 | |||||
| chrY:14668219
|
T | TG | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+45630dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14668219 | |||||
| chrY:14668335
|
C | CT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+45748dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14668335 | |||||
| chrY:14668349
|
C | G | 1 | a0001c0001t0001g0067 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.472+45758C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668349 | ||||||
| chrY:14668402
|
AT | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+45814delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14668402 | |||||
| chrY:14668768
|
C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+46177C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668768 | ||||||
| chrY:14668868
|
C | G | 2 | a0001c0001t0001g0036a0001c0001t0001g0112 | 2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.472+46277C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668868 | ||||||
| chrY:14668881
|
A | AC | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+46290_472+4629 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668881 | ||||||
| chrY:14668929
|
G | A | 5 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0001g0115others(2): Show | 5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+46338G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668929 | ||||||
| chrY:14668960
|
T | C | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.472+46369T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668960 | ||||||
| chrY:14669047
|
TA | T | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+46459delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14669047 | |||||
| chrY:14669338
|
AT | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+46751delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14669338 | |||||
| chrY:14669440
|
CT | C | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+46855delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14669440 | |||||
| chrY:14669532
|
A | T | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.472+46941A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14669532 | ||||||
| chrY:14669890
|
A | C | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.472+47299A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14669890 | ||||||
| chrY:14671040
|
C | T | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.473-48419C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14671040 | ||||||
| chrY:14671289
|
G | A | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.473-48170G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14671289 | ||||||
| chrY:14671532
|
T | TA | 12 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0097others(9): Show | 12 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(9): Show |
intron_variant | MODIFIER | c.473-47914dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671532 | |||||
| chrY:14671532
|
T | TAA | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.473-47915_473-4791 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671532 | |||||
| chrY:14671532
|
TA | T | 1 | a0001c0001t0001g0030 | 1 | HG01069.hp1 | intron_variant | MODIFIER | c.473-47914delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671532 | |||||
| chrY:14671846
|
C | CA | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.473-47604dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671846 | |||||
| chrY:14671913
|
G | GT | 37 | a0001c0001t0001g0080a0001c0001t0001g0081a0001c0001t0002g0024others(34): Show | 37 | HG00280.hp1 HG00609.hp1 HG00621.hp1 others(34): Show |
intron_variant | MODIFIER | c.473-47544dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671913 | |||||
| chrY:14672492
|
G | A | 1 | a0001c0001t0001g0111 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.473-46967G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14672492 | ||||||
| chrY:14672524
|
C | CA | 4 | a0001c0001t0002g0048a0001c0001t0002g0102a0001c0001t0003g0025others(1): Show | 4 | HG02083.hp1 NA19000.hp1 NA19009.hp1 others(1): Show |
intron_variant | MODIFIER | c.473-46917dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14672524 | |||||
| chrY:14672524
|
CA | C | 2 | a0001c0001t0002g0033a0001c0001t0002g0098 | 2 | HG02015.hp1 NA18977.hp1 |
intron_variant | MODIFIER | c.473-46917delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14672524 | |||||
| chrY:14672848
|
C | CAG | 104 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(101): Show | 104 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(101): Show |
intron_variant | MODIFIER | c.473-46610_473-4660 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14672848 | |||||
| chrY:14673114
|
G | A | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.473-46345G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673114 | ||||||
| chrY:14673283
|
A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.473-46176A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673283 | ||||||
| chrY:14673315
|
C | T | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.473-46144C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673315 | ||||||
| chrY:14673354
|
A | G | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.473-46105A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673354 | ||||||
| chrY:14673730
|
G | A | 1 | a0001c0001t0001g0014 | 1 | NA19058.hp1 | intron_variant | MODIFIER | c.473-45729G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673730 | ||||||
| chrY:14673824
|
A | G | 1 | a0001c0001t0001g0059 | 1 | NA20752.hp1 | intron_variant | MODIFIER | c.473-45635A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673824 | ||||||
| chrY:14674040
|
T | TG | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.473-45413dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14674040 | |||||
| chrY:14674064
|
T | C | 2 | a0001c0001t0001g0036a0001c0001t0001g0112 | 2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.473-45395T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14674064 | ||||||
| chrY:14674333
|
C | CT | 13 | a0001c0001t0001g0009a0001c0001t0001g0017a0001c0001t0001g0023others(10): Show | 13 | HG01106.hp1 HG01109.hp1 HG01928.hp1 others(10): Show |
intron_variant | MODIFIER | c.473-45104dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14674333 | |||||
| chrY:14674333
|
CTTTTTTT | C | 1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.473-45110_473-4510 others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14674333 | |||||
| chrY:14674501
|
G | T | 1 | a0001c0001t0002g0052 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.473-44958G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14674501 | ||||||
| chrY:14675094
|
C | G | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.473-44365C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14675094 | ||||||
| chrY:14675212
|
A | T | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.473-44247A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14675212 | ||||||
| chrY:14676574
|
G | A | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.473-42885G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14676574 | ||||||
| chrY:14676869
|
CTT | C | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.473-42587_473-4258 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14676869 | |||||
| chrY:14676900
|
G | A | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.473-42559G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14676900 | ||||||
| chrY:14677407
|
T | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.473-42052T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14677407 | ||||||
| chrY:14677440
|
C | A | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.473-42019C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14677440 | ||||||
| chrY:14677674
|
G | T | 1 | a0001c0001t0002g0099 | 1 | NA18965.hp1 | intron_variant | MODIFIER | c.473-41785G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14677674 | ||||||
| chrY:14678049
|
A | G | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.473-41410A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678049 | ||||||
| chrY:14678061
|
T | G | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.473-41398T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678061 | ||||||
| chrY:14678373
|
C | T | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.473-41086C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678373 | ||||||
| chrY:14678750
|
C | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.473-40709C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678750 | ||||||
| chrY:14678923
|
G | A | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.473-40536G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678923 | ||||||
| chrY:14679919
|
T | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.473-39540T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14679919 | ||||||
| chrY:14680394
|
G | A | 1 | a0001c0001t0001g0074 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.473-39065G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14680394 | ||||||
| chrY:14681850
|
G | A | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.473-37609G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14681850 | ||||||
| chrY:14681891
|
G | A | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.473-37568G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14681891 | ||||||
| chrY:14682105
|
G | A | 1 | a0001c0001t0001g0086 | 1 | HG02895.hp1 | intron_variant | MODIFIER | c.473-37354G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14682105 | ||||||
| chrY:14684102
|
G | A | 1 | a0001c0001t0002g0027 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.473-35357G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684102 | ||||||
| chrY:14684105
|
C | A | 3 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065 | 3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.473-35354C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684105 | ||||||
| chrY:14684110
|
C | G | 3 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065 | 3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.473-35349C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684110 | ||||||
| chrY:14684441
|
A | G | 1 | a0001c0001t0001g0059 | 1 | NA20752.hp1 | intron_variant | MODIFIER | c.473-35018A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684441 | ||||||
| chrY:14684495
|
C | G | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.473-34964C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684495 | ||||||
| chrY:14684792
|
C | T | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.473-34667C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684792 | ||||||
| chrY:14685333
|
A | T | 1 | a0001c0001t0001g0088 | 1 | HG02717.hp1 | intron_variant | MODIFIER | c.473-34126A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14685333 | ||||||
| chrY:14686632
|
G | T | 2 | a0001c0002t0001g0003a0001c0002t0001g0005 | 2 | NA18995.hp1 NA19063.hp1 |
intron_variant | MODIFIER | c.473-32827G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14686632 | ||||||
| chrY:14687450
|
A | G | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.473-32009A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14687450 | ||||||
| chrY:14687623
|
C | A | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.473-31836C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14687623 | ||||||
| chrY:14688401
|
A | G | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.473-31058A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14688401 | ||||||
| chrY:14688775
|
G | T | 1 | a0001c0001t0001g0015 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.473-30684G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14688775 | ||||||
| chrY:14689472
|
G | C | 4 | a0001c0001t0002g0027a0001c0001t0002g0045a0001c0001t0002g0119others(1): Show | 4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.473-29987G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14689472 | ||||||
| chrY:14690301
|
A | G | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.473-29158A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14690301 | ||||||
| chrY:14690512
|
A | C | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.473-28947A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14690512 | ||||||
| chrY:14690626
|
G | T | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-28833G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14690626 | ||||||
| chrY:14691369
|
A | C | 9 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0030others(6): Show | 9 | HG01069.hp1 HG01255.hp1 HG01256.hp1 others(6): Show |
intron_variant | MODIFIER | c.473-28090A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14691369 | ||||||
| chrY:14691404
|
GA | G | 1 | a0001c0001t0001g0043 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.473-28053delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14691404 | |||||
| chrY:14691688
|
A | AAAT | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.473-27771_473-2777 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14691688 | ||||||
| chrY:14692607
|
C | T | 1 | a0001c0001t0001g0093 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.473-26852C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14692607 | ||||||
| chrY:14693912
|
T | TA | 1 | a0001c0001t0001g0061 | 1 | HG00738.hp1 | intron_variant | MODIFIER | c.473-25533dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14693912 | |||||
| chrY:14693912
|
TA | T | 2 | a0001c0001t0002g0033a0001c0001t0002g0106 | 2 | HG02015.hp1 NA19066.hp1 |
intron_variant | MODIFIER | c.473-25533delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14693912 | |||||
| chrY:14694090
|
AT | A | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.473-25366delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14694090 | |||||
| chrY:14694318
|
A | C | 15 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(12): Show | 15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.473-25141A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14694318 | ||||||
| chrY:14696889
|
C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.473-22570C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14696889 | ||||||
| chrY:14696979
|
A | G | 3 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057 | 3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.473-22480A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14696979 | ||||||
| chrY:14697206
|
C | CAGAT | 42 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(39): Show | 42 | HG00140.hp1 HG00673.hp1 HG01099.hp1 others(39): Show |
intron_variant | MODIFIER | c.473-22212_473-2220 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697206 | |||||
| chrY:14697206
|
C | CAGATAGA others(1): Show |
7 | a0001c0001t0001g0023a0001c0001t0002g0033a0001c0001t0002g0044others(4): Show | 7 | HG00621.hp1 HG02015.hp1 HG02083.hp1 others(4): Show |
intron_variant | MODIFIER | c.473-22216_473-2220 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697206 | |||||
| chrY:14697206
|
CAGAT | C | 7 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0081others(4): Show | 7 | HG01074.hp1 HG01109.hp1 HG02027.hp1 others(4): Show |
intron_variant | MODIFIER | c.473-22212_473-2220 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697206 | |||||
| chrY:14697343
|
AAGAT | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.473-22095_473-2209 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697343 | |||||
| chrY:14697492
|
T | TGATA | 6 | a0001c0001t0001g0007a0001c0001t0001g0018a0001c0001t0001g0019others(3): Show | 6 | HG01106.hp1 HG04228.hp1 NA18940.hp1 others(3): Show |
intron_variant | MODIFIER | c.473-21924_473-2192 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | |||||
| chrY:14697492
|
T | TGATAGAT others(1): Show |
1 | a0001c0001t0001g0015 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.473-21928_473-2192 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | |||||
| chrY:14697492
|
TGATA | T | 44 | a0001c0001t0001g0002a0001c0001t0001g0023a0001c0001t0001g0028others(41): Show | 44 | HG00642.hp1 HG00738.hp1 HG01069.hp1 others(41): Show |
intron_variant | MODIFIER | c.473-21924_473-2192 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | |||||
| chrY:14697492
|
TGATAGAT others(1): Show |
T | 3 | a0001c0001t0001g0032a0001c0001t0002g0096a0001c0001t0002g0100 | 3 | HG01074.hp1 NA19007.hp1 NA19070.hp1 |
intron_variant | MODIFIER | c.473-21928_473-2192 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | |||||
| chrY:14697492
|
TGATAGAT others(5): Show |
T | 13 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0097others(10): Show | 13 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(10): Show |
intron_variant | MODIFIER | c.473-21932_473-2192 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | |||||
| chrY:14697589
|
T | TGAGA | 2 | a0001c0001t0001g0089a0001c0001t0001g0092 | 2 | HG03130.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.473-21865_473-2186 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697589 | |||||
| chrY:14697590
|
G | GAGAT | 7 | a0001c0001t0001g0006a0001c0001t0001g0008a0001c0001t0001g0009others(4): Show | 7 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(4): Show |
intron_variant | MODIFIER | c.473-21866_473-2186 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697590 | |||||
| chrY:14697594
|
G | GAGAGAGA others(1): Show |
7 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(4): Show | 7 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(4): Show |
intron_variant | MODIFIER | c.473-21862_473-2186 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | |||||
| chrY:14697594
|
G | GAGAGAGA others(5): Show |
2 | a0001c0001t0001g0091a0001c0001t0001g0093 | 2 | HG02486.hp1 HG03471.hp1 |
intron_variant | MODIFIER | c.473-21862_473-2186 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | |||||
| chrY:14697594
|
G | GAGAGAGA others(9): Show |
1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.473-21862_473-2186 others(20): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | |||||
| chrY:14697594
|
G | GAGAT | 36 | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0015others(33): Show | 36 | HG00140.hp1 HG00280.hp1 HG00642.hp1 others(33): Show |
intron_variant | MODIFIER | c.473-21826_473-2182 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | |||||
| chrY:14697594
|
G | GAGATAGA others(1): Show |
30 | a0001c0001t0001g0017a0001c0001t0001g0020a0001c0001t0001g0021others(27): Show | 30 | HG00609.hp1 HG00621.hp1 HG01099.hp1 others(27): Show |
intron_variant | MODIFIER | c.473-21830_473-2182 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | |||||
| chrY:14697594
|
G | GAGATAGA others(5): Show |
10 | a0001c0001t0002g0078a0001c0001t0002g0095a0001c0001t0002g0099others(7): Show | 10 | HG02056.hp1 HG02129.hp1 HG02135.hp1 others(7): Show |
intron_variant | MODIFIER | c.473-21834_473-2182 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | |||||
| chrY:14697594
|
G | GAGATAGA others(9): Show |
2 | a0001c0001t0002g0102a0001c0002t0001g0005 | 2 | NA18995.hp1 NA19000.hp1 |
intron_variant | MODIFIER | c.473-21838_473-2182 others(20): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | |||||
| chrY:14697594
|
G | T | 8 | a0001c0001t0001g0006a0001c0001t0001g0008a0001c0001t0001g0009others(5): Show | 8 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-21865G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14697594 | ||||||
| chrY:14697594
|
GAGAT | G | 8 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0055others(5): Show | 8 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-21826_473-2182 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | |||||
| chrY:14698389
|
GTA | G | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.473-21068_473-2106 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14698389 | |||||
| chrY:14698552
|
G | A | 1 | a0001c0001t0001g0086 | 1 | HG02895.hp1 | intron_variant | MODIFIER | c.473-20907G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14698552 | ||||||
| chrY:14698607
|
C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.473-20852C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14698607 | ||||||
| chrY:14698654
|
G | A | 1 | a0001c0001t0002g0094 | 1 | NA18962.hp1 | intron_variant | MODIFIER | c.473-20805G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14698654 | ||||||
| chrY:14699361
|
C | T | 15 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(12): Show | 15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.473-20098C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14699361 | ||||||
| chrY:14699426
|
C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.473-20033C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14699426 | ||||||
| chrY:14700599
|
TCTGA | T | 1 | a0001c0001t0002g0101 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.473-18857_473-1885 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14700599 | |||||
| chrY:14700990
|
C | G | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.473-18469C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14700990 | ||||||
| chrY:14701195
|
G | GCA | 3 | a0001c0001t0001g0041a0001c0001t0001g0043a0001c0001t0001g0083 | 3 | HG02145.hp1 HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.473-18234_473-1823 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14701195 | |||||
| chrY:14701195
|
GCA | G | 93 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(90): Show | 93 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(90): Show |
intron_variant | MODIFIER | c.473-18234_473-1823 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14701195 | |||||
| chrY:14701195
|
GCACACA | G | 2 | a0001c0001t0001g0109a0001c0001t0001g0117 | 2 | HG03098.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.473-18238_473-1823 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14701195 | |||||
| chrY:14701530
|
C | T | 2 | a0001c0001t0001g0007a0001c0001t0001g0018 | 2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.473-17929C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14701530 | ||||||
| chrY:14701981
|
T | TTTTA | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.473-17454_473-1745 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14701981 | |||||
| chrY:14702123
|
G | C | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.473-17336G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702123 | ||||||
| chrY:14702210
|
G | A | 1 | a0001c0001t0001g0065 | 1 | HG01255.hp1 | intron_variant | MODIFIER | c.473-17249G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702210 | ||||||
| chrY:14702303
|
T | C | 9 | a0001c0001t0001g0112a0001c0001t0002g0029a0001c0001t0002g0040others(6): Show | 9 | HG00621.hp1 HG01167.hp1 HG02056.hp1 others(6): Show |
intron_variant | MODIFIER | c.473-17156T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702303 | ||||||
| chrY:14702306
|
TA | T | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.473-17152delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702306 | ||||||
| chrY:14702307
|
A | ACCCCCT | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-17151_473-1714 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14702307 | |||||
| chrY:14702307
|
A | C | 8 | a0001c0001t0002g0029a0001c0001t0002g0040a0001c0001t0002g0048others(5): Show | 8 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-17152A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702307 | ||||||
| chrY:14702313
|
TA | T | 8 | a0001c0001t0002g0029a0001c0001t0002g0040a0001c0001t0002g0048others(5): Show | 8 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-17145delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702313 | ||||||
| chrY:14702314
|
A | C | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-17145A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702314 | ||||||
| chrY:14702367
|
G | T | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.473-17092G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702367 | ||||||
| chrY:14702440
|
G | A | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.473-17019G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702440 | ||||||
| chrY:14702611
|
G | A | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.473-16848G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702611 | ||||||
| chrY:14702848
|
A | G | 8 | a0001c0001t0002g0029a0001c0001t0002g0040a0001c0001t0002g0048others(5): Show | 8 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-16611A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702848 | ||||||
| chrY:14703005
|
G | T | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.473-16454G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14703005 | ||||||
| chrY:14704221
|
C | A | 1 | a0001c0001t0001g0059 | 1 | NA20752.hp1 | intron_variant | MODIFIER | c.473-15238C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704221 | ||||||
| chrY:14704469
|
T | C | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.473-14990T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704469 | ||||||
| chrY:14704722
|
T | A | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.473-14737T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704722 | ||||||
| chrY:14704892
|
G | A | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-14567G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704892 | ||||||
| chrY:14704998
|
G | A | 1 | a0001c0001t0001g0084 | 1 | HG02965.hp1 | intron_variant | MODIFIER | c.473-14461G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704998 | ||||||
| chrY:14705522
|
C | T | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-13937C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14705522 | ||||||
| chrY:14706043
|
T | G | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.473-13416T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706043 | ||||||
| chrY:14706438
|
G | T | 1 | a0001c0001t0001g0074 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.473-13021G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706438 | ||||||
| chrY:14706789
|
T | TAA | 2 | a0001c0001t0001g0023a0001c0001t0001g0042 | 2 | HG01192.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.473-12662_473-1266 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14706789 | |||||
| chrY:14706789
|
T | TAAAA | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.473-12664_473-1266 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14706789 | |||||
| chrY:14706798
|
AT | A | 19 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(16): Show | 19 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(16): Show |
intron_variant | MODIFIER | c.473-12660delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706798 | ||||||
| chrY:14706799
|
T | A | 79 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(76): Show | 79 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(76): Show |
intron_variant | MODIFIER | c.473-12660T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706799 | ||||||
| chrY:14706801
|
T | A | 56 | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0006others(53): Show | 56 | HG00280.hp1 HG00609.hp1 HG00621.hp1 others(53): Show |
intron_variant | MODIFIER | c.473-12658T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706801 | ||||||
| chrY:14706803
|
T | A | 6 | a0001c0001t0001g0004a0001c0001t0002g0024a0001c0001t0002g0040others(3): Show | 6 | HG02027.hp1 HG02056.hp1 HG02074.hp1 others(3): Show |
intron_variant | MODIFIER | c.473-12656T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706803 | ||||||
| chrY:14707091
|
G | GTA | 43 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0006others(40): Show | 43 | HG00621.hp1 HG01109.hp1 HG01167.hp1 others(40): Show |
intron_variant | MODIFIER | c.473-12326_473-1232 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
G | GTATA | 9 | a0001c0001t0001g0032a0001c0001t0001g0062a0001c0001t0001g0067others(6): Show | 9 | HG00280.hp1 HG01074.hp1 HG01952.hp1 others(6): Show |
intron_variant | MODIFIER | c.473-12328_473-1232 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
G | GTATATA | 8 | a0001c0001t0001g0012a0001c0001t0001g0016a0001c0001t0001g0019others(5): Show | 8 | HG02132.hp1 HG04115.hp1 HG04204.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-12330_473-1232 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
G | GTATATAT others(1): Show |
3 | a0001c0001t0001g0056a0001c0001t0001g0070a0001c0001t0002g0044 | 3 | HG00642.hp1 HG01934.hp1 NA18984.hp1 |
intron_variant | MODIFIER | c.473-12332_473-1232 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
G | GTGTATAT others(5): Show |
1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.473-12367_473-1236 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
GTA | G | 18 | a0001c0001t0001g0007a0001c0001t0001g0014a0001c0001t0001g0021others(15): Show | 18 | HG00609.hp1 HG00673.hp1 HG00738.hp1 others(15): Show |
intron_variant | MODIFIER | c.473-12326_473-1232 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
GTATA | G | 5 | a0001c0001t0001g0059a0001c0001t0001g0063a0001c0001t0001g0064others(2): Show | 5 | HG01255.hp1 HG01256.hp1 HG01258.hp1 others(2): Show |
intron_variant | MODIFIER | c.473-12328_473-1232 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
GTATATAT others(1): Show |
G | 1 | a0001c0001t0001g0004 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.473-12332_473-1232 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
GTATATAT others(11): Show |
G | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.473-12342_473-1232 others(22): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707091
|
GTATATAT others(25): Show |
G | 1 | a0001c0001t0001g0074 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.473-12356_473-1232 others(36): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | |||||
| chrY:14707246
|
A | T | 1 | a0001c0001t0001g0009 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.473-12213A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14707246 | ||||||
| chrY:14707670
|
C | CA | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.473-11781dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707670 | |||||
| chrY:14708021
|
G | A | 1 | a0001c0001t0001g0037 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.473-11438G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14708021 | ||||||
| chrY:14708589
|
A | G | 15 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(12): Show | 15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.473-10870A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14708589 | ||||||
| chrY:14709712
|
TA | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.473-9735delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14709712 | |||||
| chrY:14709763
|
C | CTG | 2 | a0001c0001t0001g0015a0001c0001t0001g0019 | 2 | NA18961.hp1 NA18970.hp1 |
intron_variant | MODIFIER | c.473-9695_473-9694d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14709763 | |||||
| chrY:14710131
|
G | A | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.473-9328G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14710131 | ||||||
| chrY:14711321
|
T | C | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.473-8138T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14711321 | ||||||
| chrY:14711342
|
A | T | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.473-8117A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14711342 | ||||||
| chrY:14712072
|
T | TA | 4 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065others(1): Show | 4 | HG01255.hp1 HG01256.hp1 HG01258.hp1 others(1): Show |
intron_variant | MODIFIER | c.473-7370dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14712072 | |||||
| chrY:14712072
|
TA | T | 1 | a0001c0001t0002g0095 | 1 | NA18986.hp1 | intron_variant | MODIFIER | c.473-7370delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14712072 | |||||
| chrY:14712102
|
A | G | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.473-7357A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14712102 | ||||||
| chrY:14712357
|
G | A | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.473-7102G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14712357 | ||||||
| chrY:14712390
|
T | C | 15 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(12): Show | 15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.473-7069T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14712390 | ||||||
| chrY:14712472
|
T | G | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.473-6987T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14712472 | ||||||
| chrY:14714762
|
G | A | 2 | a0001c0001t0001g0036a0001c0001t0001g0112 | 2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.473-4697G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14714762 | ||||||
| chrY:14715747
|
C | T | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.473-3712C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14715747 | ||||||
| chrY:14715846
|
A | G | 1 | a0001c0001t0001g0121 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.473-3613A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14715846 | ||||||
| chrY:14716635
|
C | T | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.473-2824C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14716635 | ||||||
| chrY:14718789
|
C | T | 1 | a0001c0001t0001g0081 | 1 | NA18747.hp1 | intron_variant | MODIFIER | c.473-670C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14718789 | ||||||
| chrY:14719259
|
G | C | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.473-200G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14719259 | ||||||
| chrY:14719390
|
A | AT | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.473-63dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14719390 | |||||
| chrY:14719540
|
C | T | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.532+22C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14719540 | ||||||
| chrY:14720055
|
T | A | 1 | a0001c0001t0002g0052 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.532+537T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14720055 | ||||||
| chrY:14720421
|
G | GT | 15 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(12): Show | 15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.532+910dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14720421 | |||||
| chrY:14720421
|
G | GTT | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.532+909_532+910dup others(2): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14720421 | |||||
| chrY:14720883
|
T | C | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.532+1365T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14720883 | ||||||
| chrY:14721775
|
T | TAC | 5 | a0001c0001t0001g0009a0001c0001t0001g0020a0001c0001t0001g0023others(2): Show | 5 | HG00738.hp1 HG03225.hp1 NA18960.hp1 others(2): Show |
intron_variant | MODIFIER | c.533-1309_533-1308d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14721775 | |||||
| chrY:14721775
|
T | TACAC | 14 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(11): Show | 14 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(11): Show |
intron_variant | MODIFIER | c.533-1311_533-1308d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14721775 | |||||
| chrY:14721775
|
T | TACACAC | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.533-1313_533-1308d others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14721775 | |||||
| chrY:14721775
|
TAC | T | 3 | a0001c0001t0001g0017a0001c0001t0001g0042a0001c0001t0001g0079 | 3 | HG01192.hp1 HG03017.hp1 NA18966.hp1 |
intron_variant | MODIFIER | c.533-1309_533-1308d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14721775 | |||||
| chrY:14722389
|
G | T | 1 | a0001c0001t0001g0009 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.533-728G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14722389 | ||||||
| chrY:14722585
|
C | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.533-532C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14722585 | ||||||
| chrY:14722796
|
GGCGGA | G | 1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.533-318_533-314del others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722796 | |||||
| chrY:14722861
|
C | T | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.533-256C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14722861 | ||||||
| chrY:14722866
|
C | CA | 23 | a0001c0001t0001g0009a0001c0001t0001g0041a0001c0001t0001g0043others(20): Show | 23 | HG00621.hp1 HG00738.hp1 HG01106.hp1 others(20): Show |
intron_variant | MODIFIER | c.533-206dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAA | 6 | a0001c0001t0001g0021a0001c0001t0002g0027a0001c0001t0002g0045others(3): Show | 6 | HG00673.hp1 HG02040.hp1 HG02071.hp1 others(3): Show |
intron_variant | MODIFIER | c.533-207_533-206dup others(2): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAA | 3 | a0001c0001t0001g0016a0001c0001t0001g0054a0001c0001t0003g0026 | 3 | HG03490.hp1 NA18952.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.533-208_533-206dup others(3): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAA | 6 | a0001c0001t0001g0015a0001c0001t0001g0020a0001c0001t0001g0034others(3): Show | 6 | HG02602.hp1 HG03492.hp1 HG04204.hp1 others(3): Show |
intron_variant | MODIFIER | c.533-209_533-206dup others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAA | 4 | a0001c0001t0001g0007a0001c0001t0001g0018a0001c0001t0001g0056others(1): Show | 4 | HG00642.hp1 HG04228.hp1 NA18940.hp1 others(1): Show |
intron_variant | MODIFIER | c.533-210_533-206dup others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAAA | 7 | a0001c0001t0001g0004a0001c0001t0001g0084a0001c0001t0001g0086others(4): Show | 7 | HG02698.hp1 HG02895.hp1 HG02965.hp1 others(4): Show |
intron_variant | MODIFIER | c.533-211_533-206dup others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAAAA | 9 | a0001c0001t0001g0017a0001c0001t0001g0031a0001c0001t0001g0035others(6): Show | 9 | HG01109.hp1 HG02145.hp1 HG02258.hp1 others(6): Show |
intron_variant | MODIFIER | c.533-212_533-206dup others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAAAA others(1): Show |
7 | a0001c0001t0001g0023a0001c0001t0001g0028a0001c0001t0001g0037others(4): Show | 7 | HG01099.hp1 HG02055.hp1 HG02486.hp1 others(4): Show |
intron_variant | MODIFIER | c.533-213_533-206dup others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAAAA others(2): Show |
2 | a0001c0001t0001g0036a0001c0001t0001g0076 | 2 | HG00140.hp1 HG04115.hp1 |
intron_variant | MODIFIER | c.533-214_533-206dup others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAAAA others(3): Show |
2 | a0001c0001t0001g0032a0001c0001t0001g0089 | 2 | HG01074.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.533-215_533-206dup others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAAAA others(4): Show |
1 | a0001c0001t0001g0092 | 1 | HG03130.hp1 | intron_variant | MODIFIER | c.533-216_533-206dup others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAAAA others(5): Show |
1 | a0001c0001t0001g0115 | 1 | NA18971.hp1 | intron_variant | MODIFIER | c.533-217_533-206dup others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
C | CAAAAAAA others(6): Show |
1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.533-218_533-206dup others(13): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CA | C | 5 | a0001c0001t0001g0006a0001c0001t0001g0008a0001c0001t0001g0010others(2): Show | 5 | NA18944.hp1 NA18948.hp1 NA18983.hp1 others(2): Show |
intron_variant | MODIFIER | c.533-206delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAA | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.533-209_533-206del others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA | C | 2 | a0001c0001t0001g0109a0002c0003t0001g0110 | 2 | NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.533-212_533-206del others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA others(1): Show |
C | 1 | a0001c0001t0001g0111 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.533-213_533-206del others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA others(4): Show |
C | 2 | a0001c0001t0001g0019a0001c0001t0002g0101 | 2 | NA18961.hp1 NA18994.hp1 |
intron_variant | MODIFIER | c.533-216_533-206del others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA others(9): Show |
C | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.533-221_533-206del others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA others(11): Show |
C | 3 | a0001c0001t0001g0042a0001c0001t0002g0119a0001c0001t0002g0120 | 3 | HG01192.hp1 HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.533-223_533-206del others(18): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA others(14): Show |
C | 9 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0038others(6): Show | 9 | HG01255.hp1 HG01256.hp1 HG01258.hp1 others(6): Show |
intron_variant | MODIFIER | c.533-226_533-206del others(21): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA others(15): Show |
C | 2 | a0001c0001t0001g0030a0001c0001t0001g0112 | 2 | HG01069.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.533-227_533-206del others(22): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA others(17): Show |
C | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.533-229_533-206del others(24): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722866
|
CAAAAAAA others(22): Show |
C | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.533-234_533-206del others(29): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | |||||
| chrY:14722889
|
A | G | 2 | a0001c0001t0002g0097a0001c0001t0002g0099 | 2 | NA18965.hp1 NA19005.hp1 |
intron_variant | MODIFIER | c.533-228A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14722889 | ||||||
| chrY:14723376
|
T | G | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+107T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14723376 | ||||||
| chrY:14723406
|
T | C | 1 | a0001c0001t0001g0067 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.685+137T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14723406 | ||||||
| chrY:14723511
|
G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+242G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14723511 | ||||||
| chrY:14724031
|
G | GT | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.685+769dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14724031 | |||||
| chrY:14724199
|
C | A | 2 | a0001c0001t0001g0036a0001c0001t0001g0112 | 2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.685+930C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14724199 | ||||||
| chrY:14724387
|
G | GT | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+1129dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14724387 | |||||
| chrY:14724547
|
T | A | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.685+1278T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14724547 | ||||||
| chrY:14724668
|
G | A | 2 | a0001c0001t0001g0036a0001c0001t0001g0112 | 2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.685+1399G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14724668 | ||||||
| chrY:14725457
|
C | G | 1 | a0001c0001t0001g0028 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.685+2188C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14725457 | ||||||
| chrY:14725689
|
C | G | 4 | a0001c0001t0002g0027a0001c0001t0002g0045a0001c0001t0002g0119others(1): Show | 4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+2420C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14725689 | ||||||
| chrY:14726061
|
G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+2792G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14726061 | ||||||
| chrY:14726165
|
A | G | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.685+2896A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14726165 | ||||||
| chrY:14727082
|
A | AAAAG | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+3833_685+3836d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14727082 | |||||
| chrY:14727761
|
T | A | 43 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(40): Show | 43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.685+4492T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14727761 | ||||||
| chrY:14727930
|
C | T | 11 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0030others(8): Show | 11 | HG00140.hp1 HG01069.hp1 HG01167.hp1 others(8): Show |
intron_variant | MODIFIER | c.685+4661C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14727930 | ||||||
| chrY:14728232
|
CTT | C | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.685+4965_685+4966d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14728232 | |||||
| chrY:14728379
|
T | C | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+5110T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14728379 | ||||||
| chrY:14728891
|
C | T | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.685+5622C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14728891 | ||||||
| chrY:14728937
|
G | T | 15 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(12): Show | 15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.685+5668G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14728937 | ||||||
| chrY:14729454
|
G | A | 4 | a0001c0001t0001g0022a0001c0001t0001g0062a0001c0001t0001g0074others(1): Show | 4 | HG01928.hp1 HG01952.hp1 HG02132.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+6185G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14729454 | ||||||
| chrY:14730197
|
C | T | 17 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(14): Show | 17 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(14): Show |
intron_variant | MODIFIER | c.685+6928C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14730197 | ||||||
| chrY:14730916
|
G | C | 2 | a0001c0001t0001g0062a0001c0001t0001g0074 | 2 | HG01928.hp1 HG01952.hp1 |
intron_variant | MODIFIER | c.685+7647G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14730916 | ||||||
| chrY:14730987
|
A | ATG | 30 | a0001c0001t0001g0002a0001c0001t0001g0009a0001c0001t0001g0018others(27): Show | 30 | HG01069.hp1 HG01099.hp1 HG01106.hp1 others(27): Show |
intron_variant | MODIFIER | c.685+7762_685+7763d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | |||||
| chrY:14730987
|
A | ATGTG | 10 | a0001c0001t0001g0001a0001c0001t0001g0055a0001c0001t0001g0062others(7): Show | 10 | HG00609.hp1 HG01928.hp1 HG01952.hp1 others(7): Show |
intron_variant | MODIFIER | c.685+7760_685+7763d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | |||||
| chrY:14730987
|
A | ATGTGTG | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.685+7758_685+7763d others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | |||||
| chrY:14730987
|
ATG | A | 22 | a0001c0001t0001g0042a0001c0001t0001g0081a0001c0001t0001g0112others(19): Show | 22 | HG01167.hp1 HG01192.hp1 HG02074.hp1 others(19): Show |
intron_variant | MODIFIER | c.685+7762_685+7763d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | |||||
| chrY:14730987
|
ATGTG | A | 2 | a0001c0001t0001g0069a0001c0001t0003g0025 | 2 | HG01261.hp1 HG02083.hp1 |
intron_variant | MODIFIER | c.685+7760_685+7763d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | |||||
| chrY:14730987
|
ATGTGTG | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+7758_685+7763d others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | |||||
| chrY:14730987
|
ATGTGTGT others(5): Show |
A | 2 | a0001c0001t0001g0116a0001c0001t0002g0027 | 2 | HG00673.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.685+7752_685+7763d others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | |||||
| chrY:14731031
|
GTA | G | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.685+7765_685+7766d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14731031 | |||||
| chrY:14731893
|
C | CA | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.685+8632dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14731893 | |||||
| chrY:14731942
|
C | T | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.685+8673C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14731942 | ||||||
| chrY:14732236
|
A | G | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.685+8967A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14732236 | ||||||
| chrY:14732616
|
G | GT | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+9351dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14732616 | |||||
| chrY:14732651
|
TA | T | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+9386delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14732651 | |||||
| chrY:14732770
|
C | T | 1 | a0001c0001t0003g0025 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.685+9501C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14732770 | ||||||
| chrY:14732796
|
A | C | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.685+9527A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14732796 | ||||||
| chrY:14733256
|
AT | A | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+9990delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14733256 | |||||
| chrY:14733527
|
A | AT | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+10266dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14733527 | |||||
| chrY:14733650
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+10381G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14733650 | ||||||
| chrY:14733655
|
TC | T | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+10389delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14733655 | |||||
| chrY:14733927
|
C | T | 1 | a0001c0001t0001g0089 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.685+10658C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14733927 | ||||||
| chrY:14734401
|
G | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.685+11132G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14734401 | ||||||
| chrY:14734559
|
C | A | 17 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(14): Show | 17 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(14): Show |
intron_variant | MODIFIER | c.685+11290C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14734559 | ||||||
| chrY:14735245
|
A | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+11976A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14735245 | ||||||
| chrY:14735480
|
C | A | 1 | a0001c0001t0001g0058 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.685+12211C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14735480 | ||||||
| chrY:14735921
|
G | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.685+12652G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14735921 | ||||||
| chrY:14736179
|
A | G | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.685+12910A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14736179 | ||||||
| chrY:14736204
|
T | C | 3 | a0001c0001t0002g0024a0001c0001t0003g0025a0001c0001t0003g0026 | 3 | HG02074.hp1 HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.685+12935T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14736204 | ||||||
| chrY:14736616
|
C | T | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.685+13347C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14736616 | ||||||
| chrY:14740161
|
C | T | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.685+16892C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14740161 | ||||||
| chrY:14741673
|
T | C | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.685+18404T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14741673 | ||||||
| chrY:14742598
|
A | G | 1 | a0001c0001t0002g0107 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.685+19329A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14742598 | ||||||
| chrY:14742716
|
C | T | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+19447C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14742716 | ||||||
| chrY:14742920
|
C | T | 37 | a0001c0001t0001g0041a0001c0001t0001g0043a0001c0001t0002g0024others(34): Show | 37 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(34): Show |
intron_variant | MODIFIER | c.685+19651C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14742920 | ||||||
| chrY:14743066
|
G | A | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+19797G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14743066 | ||||||
| chrY:14743492
|
T | TA | 3 | a0001c0001t0001g0018a0001c0001t0002g0040a0001c0001t0002g0047 | 3 | NA18940.hp1 NA18982.hp1 NA19083.hp1 |
intron_variant | MODIFIER | c.685+20240dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14743492 | |||||
| chrY:14743492
|
TA | T | 7 | a0001c0001t0001g0007a0001c0001t0001g0014a0001c0001t0001g0022others(4): Show | 7 | HG01069.hp1 HG02015.hp1 HG02132.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+20240delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14743492 | |||||
| chrY:14743493
|
A | T | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.685+20224A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14743493 | ||||||
| chrY:14743901
|
C | T | 35 | a0001c0001t0002g0024a0001c0001t0002g0027a0001c0001t0002g0029others(32): Show | 35 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(32): Show |
intron_variant | MODIFIER | c.685+20632C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14743901 | ||||||
| chrY:14744193
|
C | T | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.685+20924C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14744193 | ||||||
| chrY:14744477
|
C | T | 103 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(100): Show | 103 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(100): Show |
intron_variant | MODIFIER | c.685+21208C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14744477 | ||||||
| chrY:14744556
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+21287G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14744556 | ||||||
| chrY:14745251
|
C | T | 3 | a0001c0001t0002g0024a0001c0001t0003g0025a0001c0001t0003g0026 | 3 | HG02074.hp1 HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.685+21982C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14745251 | ||||||
| chrY:14745974
|
AT | A | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.685+22716delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14745974 | |||||
| chrY:14746186
|
G | A | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.685+22917G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14746186 | ||||||
| chrY:14746313
|
G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+23044G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14746313 | ||||||
| chrY:14746478
|
A | T | 2 | a0001c0001t0001g0041a0001c0001t0001g0043 | 2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.685+23209A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14746478 | ||||||
| chrY:14747374
|
A | G | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.685+24105A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14747374 | ||||||
| chrY:14747577
|
A | G | 1 | a0001c0001t0002g0078 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.685+24308A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14747577 | ||||||
| chrY:14747851
|
AT | A | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+24584delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14747851 | |||||
| chrY:14748835
|
G | A | 1 | a0001c0001t0002g0101 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.685+25566G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748835 | ||||||
| chrY:14748869
|
C | CA | 2 | a0001c0001t0001g0061a0001c0001t0001g0072 | 2 | HG00738.hp1 HG01358.hp1 |
intron_variant | MODIFIER | c.685+25624dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748869 | |||||
| chrY:14748869
|
CA | C | 3 | a0001c0001t0001g0001a0001c0001t0001g0055a0001c0001t0001g0058 | 3 | HG01943.hp1 HG02735.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.685+25624delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748869 | |||||
| chrY:14748888
|
A | G | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+25619A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748888 | ||||||
| chrY:14748890
|
AAAAG | A | 5 | a0001c0001t0001g0083a0001c0001t0001g0088a0001c0001t0001g0090others(2): Show | 5 | HG02055.hp1 HG02145.hp1 HG02486.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+25625_685+2562 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748890 | |||||
| chrY:14748891
|
AAAG | A | 2 | a0001c0001t0001g0068a0001c0001t0001g0081 | 2 | HG02738.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.685+25625_685+2562 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748891 | |||||
| chrY:14748894
|
G | A | 20 | a0001c0001t0001g0017a0001c0001t0001g0037a0001c0001t0001g0080others(17): Show | 20 | HG00280.hp1 HG02074.hp1 HG02135.hp1 others(17): Show |
intron_variant | MODIFIER | c.685+25625G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748894 | ||||||
| chrY:14748895
|
A | G | 12 | a0001c0001t0001g0017a0001c0001t0001g0037a0001c0001t0001g0080others(9): Show | 12 | HG00280.hp1 HG02074.hp1 HG02135.hp1 others(9): Show |
intron_variant | MODIFIER | c.685+25626A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748895 | ||||||
| chrY:14748896
|
A | G | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.685+25627A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748896 | ||||||
| chrY:14748897
|
A | G | 7 | a0001c0001t0001g0084a0001c0001t0001g0085a0001c0001t0001g0086others(4): Show | 7 | HG02258.hp1 HG02895.hp1 HG02965.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+25628A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748897 | ||||||
| chrY:14748898
|
A | G | 2 | a0001c0001t0001g0068a0001c0001t0001g0081 | 2 | HG02738.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.685+25629A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748898 | ||||||
| chrY:14748900
|
AAAAG | A | 12 | a0001c0001t0001g0030a0001c0001t0001g0034a0001c0001t0001g0038others(9): Show | 12 | HG00642.hp1 HG01069.hp1 HG01167.hp1 others(9): Show |
intron_variant | MODIFIER | c.685+25667_685+2567 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748900 | |||||
| chrY:14748900
|
AAAAGAAA others(1): Show |
A | 73 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(70): Show | 73 | HG00140.hp1 HG00609.hp1 HG00621.hp1 others(70): Show |
intron_variant | MODIFIER | c.685+25663_685+2567 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748900 | |||||
| chrY:14748901
|
AAAGAAAG | A | 12 | a0001c0001t0001g0017a0001c0001t0001g0037a0001c0001t0001g0080others(9): Show | 12 | HG00280.hp1 HG02074.hp1 HG02135.hp1 others(9): Show |
intron_variant | MODIFIER | c.685+25635_685+2564 others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748901 | |||||
| chrY:14748902
|
A | G | 5 | a0001c0001t0001g0083a0001c0001t0001g0088a0001c0001t0001g0090others(2): Show | 5 | HG02055.hp1 HG02145.hp1 HG02486.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+25633A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748902 | ||||||
| chrY:14748902
|
AAGAAAG | A | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.685+25635_685+2564 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748902 | |||||
| chrY:14748903
|
AGAAAG | A | 7 | a0001c0001t0001g0084a0001c0001t0001g0085a0001c0001t0001g0086others(4): Show | 7 | HG02258.hp1 HG02895.hp1 HG02965.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+25635_685+2563 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748903 | ||||||
| chrY:14748904
|
G | A | 7 | a0001c0001t0001g0068a0001c0001t0001g0081a0001c0001t0001g0083others(4): Show | 7 | HG02055.hp1 HG02145.hp1 HG02486.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+25635G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748904 | ||||||
| chrY:14748908
|
G | A | 5 | a0001c0001t0001g0083a0001c0001t0001g0088a0001c0001t0001g0090others(2): Show | 5 | HG02055.hp1 HG02145.hp1 HG02486.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+25639G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748908 | ||||||
| chrY:14749228
|
G | A | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.685+25959G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14749228 | ||||||
| chrY:14751047
|
G | A | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.685+27778G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751047 | ||||||
| chrY:14751216
|
G | T | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.685+27947G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751216 | ||||||
| chrY:14751379
|
G | C | 38 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(35): Show | 38 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(35): Show |
intron_variant | MODIFIER | c.685+28110G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751379 | ||||||
| chrY:14751663
|
A | AT | 4 | a0001c0001t0001g0002a0001c0001t0001g0109a0001c0001t0001g0111others(1): Show | 4 | NA18612.hp1 NA19079.hp1 NA19091.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+28408dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14751663 | |||||
| chrY:14751699
|
A | G | 1 | a0001c0001t0001g0032 | 1 | HG01074.hp1 | intron_variant | MODIFIER | c.685+28430A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751699 | ||||||
| chrY:14751921
|
G | T | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.685+28652G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751921 | ||||||
| chrY:14752038
|
C | A | 5 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0001g0115others(2): Show | 5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+28769C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14752038 | ||||||
| chrY:14753568
|
T | C | 1 | a0001c0001t0001g0038 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.685+30299T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14753568 | ||||||
| chrY:14753843
|
G | A | 1 | a0001c0001t0001g0089 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.685+30574G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14753843 | ||||||
| chrY:14753877
|
G | C | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.685+30608G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14753877 | ||||||
| chrY:14754621
|
T | G | 1 | a0001c0001t0002g0029 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.685+31352T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14754621 | ||||||
| chrY:14755131
|
G | A | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+31862G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14755131 | ||||||
| chrY:14755435
|
C | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.685+32166C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14755435 | ||||||
| chrY:14755802
|
T | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.685+32533T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14755802 | ||||||
| chrY:14756074
|
T | C | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.685+32805T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756074 | ||||||
| chrY:14756426
|
C | G | 2 | a0001c0001t0002g0119a0001c0001t0002g0120 | 2 | HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.685+33157C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756426 | ||||||
| chrY:14756545
|
C | T | 2 | a0001c0001t0001g0002a0001c0001t0001g0021 | 2 | HG02040.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.685+33276C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756545 | ||||||
| chrY:14756581
|
C | G | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.685+33312C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756581 | ||||||
| chrY:14756635
|
C | G | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.685+33366C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756635 | ||||||
| chrY:14756693
|
C | T | 1 | a0001c0001t0001g0074 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.685+33424C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756693 | ||||||
| chrY:14756751
|
G | GTA | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.685+33494_685+3349 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756751 | |||||
| chrY:14756866
|
C | CAT | 1 | a0001c0001t0001g0035 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.685+33640_685+3364 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756866
|
C | CATAT | 4 | a0001c0001t0001g0083a0001c0001t0001g0115a0001c0001t0001g0116others(1): Show | 4 | HG02145.hp1 HG03225.hp1 NA18971.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+33638_685+3364 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756866
|
C | CATATAT | 2 | a0001c0001t0001g0023a0001c0001t0001g0041 | 2 | HG04199.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.685+33636_685+3364 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756866
|
CAT | C | 4 | a0001c0001t0001g0031a0001c0001t0001g0032a0001c0001t0001g0086others(1): Show | 4 | HG01074.hp1 HG02895.hp1 HG03710.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+33640_685+3364 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756866
|
CATAT | C | 20 | a0001c0001t0001g0028a0001c0001t0001g0037a0001c0001t0001g0056others(17): Show | 20 | HG00280.hp1 HG00642.hp1 HG00738.hp1 others(17): Show |
intron_variant | MODIFIER | c.685+33638_685+3364 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756866
|
CATATAT | C | 16 | a0001c0001t0001g0017a0001c0001t0001g0020a0001c0001t0001g0042others(13): Show | 16 | HG01192.hp1 HG01255.hp1 HG01256.hp1 others(13): Show |
intron_variant | MODIFIER | c.685+33636_685+3364 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756866
|
CATATATA others(1): Show |
C | 27 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(24): Show | 27 | HG00140.hp1 HG00609.hp1 HG00673.hp1 others(24): Show |
intron_variant | MODIFIER | c.685+33634_685+3364 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756866
|
CATATATA others(3): Show |
C | 41 | a0001c0001t0001g0001a0001c0001t0001g0021a0001c0001t0001g0022others(38): Show | 41 | HG00621.hp1 HG01167.hp1 HG01928.hp1 others(38): Show |
intron_variant | MODIFIER | c.685+33632_685+3364 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756866
|
CATATATA others(5): Show |
C | 2 | a0001c0001t0001g0002a0001c0001t0002g0040 | 2 | NA19083.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.685+33630_685+3364 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | |||||
| chrY:14756893
|
A | T | 7 | a0001c0001t0002g0029a0001c0001t0002g0048a0001c0001t0002g0049others(4): Show | 7 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+33624A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756893 | ||||||
| chrY:14756894
|
T | C | 7 | a0001c0001t0002g0029a0001c0001t0002g0048a0001c0001t0002g0049others(4): Show | 7 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+33625T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756894 | ||||||
| chrY:14756895
|
A | T | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+33626A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756895 | ||||||
| chrY:14756896
|
T | C | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+33627T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756896 | ||||||
| chrY:14757150
|
T | G | 3 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057 | 3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.685+33881T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14757150 | ||||||
| chrY:14757678
|
G | T | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.685+34409G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14757678 | ||||||
| chrY:14757790
|
C | T | 2 | a0001c0001t0001g0007a0001c0001t0001g0018 | 2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.685+34521C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14757790 | ||||||
| chrY:14757793
|
A | G | 1 | a0001c0001t0002g0096 | 1 | NA19007.hp1 | intron_variant | MODIFIER | c.685+34524A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14757793 | ||||||
| chrY:14758075
|
G | C | 8 | a0001c0001t0001g0006a0001c0001t0001g0008a0001c0001t0001g0009others(5): Show | 8 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(5): Show |
intron_variant | MODIFIER | c.685+34806G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14758075 | ||||||
| chrY:14758112
|
G | A | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.685+34843G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14758112 | ||||||
| chrY:14759107
|
G | C | 35 | a0001c0001t0002g0024a0001c0001t0002g0027a0001c0001t0002g0029others(32): Show | 35 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(32): Show |
intron_variant | MODIFIER | c.685+35838G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14759107 | ||||||
| chrY:14759290
|
T | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+36021T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14759290 | ||||||
| chrY:14759929
|
C | A | 5 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0001g0115others(2): Show | 5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+36660C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14759929 | ||||||
| chrY:14759954
|
A | G | 1 | a0001c0001t0001g0004 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.685+36685A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14759954 | ||||||
| chrY:14761523
|
C | T | 1 | a0001c0001t0002g0049 | 1 | NA19085.hp1 | intron_variant | MODIFIER | c.685+38254C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14761523 | ||||||
| chrY:14761764
|
C | T | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.685+38495C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14761764 | ||||||
| chrY:14762322
|
G | A | 1 | a0001c0001t0002g0048 | 1 | NA19062.hp1 | intron_variant | MODIFIER | c.685+39053G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14762322 | ||||||
| chrY:14763888
|
A | G | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.685+40619A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14763888 | ||||||
| chrY:14765018
|
C | A | 2 | a0001c0001t0002g0029a0001c0001t0002g0078 | 2 | HG02056.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.685+41749C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14765018 | ||||||
| chrY:14765026
|
CAT | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.685+41759_685+4176 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14765026 | |||||
| chrY:14765210
|
A | G | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.685+41941A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14765210 | ||||||
| chrY:14766870
|
A | C | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+43601A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14766870 | ||||||
| chrY:14767022
|
A | C | 1 | a0001c0001t0001g0092 | 1 | HG03130.hp1 | intron_variant | MODIFIER | c.685+43753A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14767022 | ||||||
| chrY:14768205
|
C | T | 5 | a0001c0001t0002g0048a0001c0001t0002g0049a0001c0001t0002g0050others(2): Show | 5 | HG00621.hp1 NA18945.hp1 NA19062.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+44936C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14768205 | ||||||
| chrY:14768723
|
G | T | 15 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(12): Show | 15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.685+45454G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14768723 | ||||||
| chrY:14769075
|
A | C | 1 | a0001c0001t0002g0045 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.685+45806A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14769075 | ||||||
| chrY:14769262
|
C | T | 3 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057 | 3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.685+45993C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14769262 | ||||||
| chrY:14769684
|
A | AC | 1 | a0001c0001t0001g0076 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.685+46419dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14769684 | |||||
| chrY:14769821
|
A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.685+46552A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14769821 | ||||||
| chrY:14769900
|
G | A | 1 | a0001c0001t0001g0028 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.685+46631G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14769900 | ||||||
| chrY:14770688
|
C | T | 103 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(100): Show | 103 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(100): Show |
intron_variant | MODIFIER | c.685+47419C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14770688 | ||||||
| chrY:14770736
|
T | G | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.685+47467T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14770736 | ||||||
| chrY:14770942
|
G | A | 1 | a0001c0001t0002g0048 | 1 | NA19062.hp1 | intron_variant | MODIFIER | c.685+47673G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14770942 | ||||||
| chrY:14771247
|
A | G | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.685+47978A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14771247 | ||||||
| chrY:14772119
|
C | T | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.685+48850C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14772119 | ||||||
| chrY:14773560
|
G | GA | 1 | a0001c0001t0001g0068 | 1 | HG02738.hp1 | intron_variant | MODIFIER | c.685+50301dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14773560 | |||||
| chrY:14773694
|
A | T | 3 | a0001c0001t0002g0044a0001c0001t0002g0046a0001c0001t0002g0047 | 3 | HG00609.hp1 NA18982.hp1 NA18984.hp1 |
intron_variant | MODIFIER | c.685+50425A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14773694 | ||||||
| chrY:14773870
|
C | T | 7 | a0001c0001t0001g0034a0001c0001t0001g0054a0001c0001t0001g0066others(4): Show | 7 | HG02602.hp1 HG02738.hp1 HG03490.hp1 others(4): Show |
intron_variant | MODIFIER | c.686-50318C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14773870 | ||||||
| chrY:14774581
|
C | T | 3 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057 | 3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.686-49607C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14774581 | ||||||
| chrY:14775031
|
C | T | 12 | a0001c0001t0002g0027a0001c0001t0002g0029a0001c0001t0002g0040others(9): Show | 12 | HG00621.hp1 HG00673.hp1 HG02056.hp1 others(9): Show |
intron_variant | MODIFIER | c.686-49157C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14775031 | ||||||
| chrY:14775183
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-49005G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14775183 | ||||||
| chrY:14775326
|
T | C | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.686-48862T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14775326 | ||||||
| chrY:14775904
|
C | G | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.686-48284C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14775904 | ||||||
| chrY:14776204
|
A | C | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.686-47984A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776204 | ||||||
| chrY:14776340
|
A | G | 6 | a0001c0001t0001g0030a0001c0001t0001g0038a0001c0001t0001g0039others(3): Show | 6 | HG01069.hp1 HG01255.hp1 HG01256.hp1 others(3): Show |
intron_variant | MODIFIER | c.686-47848A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776340 | ||||||
| chrY:14776611
|
T | C | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.686-47577T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776611 | ||||||
| chrY:14776977
|
G | T | 1 | a0001c0001t0002g0100 | 1 | NA19070.hp1 | intron_variant | MODIFIER | c.686-47211G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776977 | ||||||
| chrY:14776994
|
C | T | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.686-47194C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776994 | ||||||
| chrY:14777463
|
C | G | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.686-46725C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14777463 | ||||||
| chrY:14778034
|
T | TATAA | 87 | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0007others(84): Show | 87 | HG00280.hp1 HG00609.hp1 HG00621.hp1 others(84): Show |
intron_variant | MODIFIER | c.686-46113_686-4611 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14778034 | |||||
| chrY:14778034
|
T | TATAAATA others(1): Show |
5 | a0001c0001t0001g0004a0001c0001t0001g0036a0001c0001t0001g0042others(2): Show | 5 | HG00140.hp1 HG01192.hp1 HG01928.hp1 others(2): Show |
intron_variant | MODIFIER | c.686-46117_686-4611 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14778034 | |||||
| chrY:14778034
|
T | TATAAATA others(5): Show |
1 | a0001c0001t0002g0101 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.686-46121_686-4611 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14778034 | |||||
| chrY:14778994
|
G | A | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.686-45194G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14778994 | ||||||
| chrY:14779159
|
C | T | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-45029C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14779159 | ||||||
| chrY:14779888
|
C | T | 1 | a0001c0001t0001g0009 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.686-44300C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14779888 | ||||||
| chrY:14781000
|
T | A | 15 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(12): Show | 15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.686-43188T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14781000 | ||||||
| chrY:14781847
|
C | A | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.686-42341C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14781847 | ||||||
| chrY:14782740
|
C | T | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.686-41448C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14782740 | ||||||
| chrY:14783309
|
A | G | 3 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065 | 3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.686-40879A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14783309 | ||||||
| chrY:14783397
|
C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-40791C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14783397 | ||||||
| chrY:14783684
|
A | G | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-40504A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14783684 | ||||||
| chrY:14783755
|
CAT | C | 4 | a0001c0001t0002g0027a0001c0001t0002g0045a0001c0001t0002g0119others(1): Show | 4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-40432_686-4043 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14783755 | ||||||
| chrY:14784268
|
G | A | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.686-39920G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14784268 | ||||||
| chrY:14784477
|
G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-39711G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14784477 | ||||||
| chrY:14784659
|
C | CA | 2 | a0001c0001t0001g0117a0001c0001t0004g0114 | 2 | HG02647.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.686-39512dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14784659 | |||||
| chrY:14784659
|
C | CAA | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.686-39513_686-3951 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14784659 | |||||
| chrY:14784659
|
CA | C | 3 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065 | 3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.686-39512delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14784659 | |||||
| chrY:14785338
|
C | CT | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.686-38848dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14785338 | |||||
| chrY:14785738
|
T | A | 15 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057others(12): Show | 15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.686-38450T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14785738 | ||||||
| chrY:14785763
|
C | CA | 13 | a0001c0001t0001g0013a0001c0001t0001g0021a0001c0001t0001g0035others(10): Show | 13 | HG00280.hp1 HG01109.hp1 HG01192.hp1 others(10): Show |
intron_variant | MODIFIER | c.686-38402dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14785763 | |||||
| chrY:14785763
|
CA | C | 4 | a0001c0001t0001g0008a0001c0001t0001g0064a0001c0001t0001g0112others(1): Show | 4 | HG01167.hp1 HG01256.hp1 HG02647.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-38402delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14785763 | |||||
| chrY:14785932
|
GAAAAA | G | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.686-38252_686-3824 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14785932 | |||||
| chrY:14786275
|
T | C | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.686-37913T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14786275 | ||||||
| chrY:14787580
|
T | G | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.686-36608T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14787580 | ||||||
| chrY:14787620
|
T | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-36568T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14787620 | ||||||
| chrY:14788367
|
G | A | 3 | a0001c0001t0001g0023a0001c0001t0004g0114a0001c0001t0005g0077 | 3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.686-35821G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14788367 | ||||||
| chrY:14788648
|
A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-35540A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14788648 | ||||||
| chrY:14788691
|
T | C | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.686-35497T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14788691 | ||||||
| chrY:14790031
|
A | AT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.686-34147dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14790031 | |||||
| chrY:14790190
|
A | G | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.686-33998A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14790190 | ||||||
| chrY:14790554
|
A | G | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.686-33634A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14790554 | ||||||
| chrY:14790783
|
C | T | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.686-33405C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14790783 | ||||||
| chrY:14791171
|
A | T | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.686-33017A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14791171 | ||||||
| chrY:14791202
|
G | C | 3 | a0001c0001t0002g0024a0001c0001t0003g0025a0001c0001t0003g0026 | 3 | HG02074.hp1 HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.686-32986G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14791202 | ||||||
| chrY:14792631
|
G | GA | 3 | a0001c0001t0001g0030a0001c0001t0001g0038a0001c0001t0001g0039 | 3 | HG01069.hp1 HG01433.hp1 homoSapiens_chm13v2.hp1 |
intron_variant | MODIFIER | c.686-31548dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792631 | |||||
| chrY:14792784
|
C | CA | 23 | a0001c0001t0001g0002a0001c0001t0001g0032a0001c0001t0001g0035others(20): Show | 23 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(20): Show |
intron_variant | MODIFIER | c.686-31364dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
C | CAA | 10 | a0001c0001t0001g0034a0001c0001t0001g0054a0001c0001t0001g0068others(7): Show | 10 | HG00673.hp1 HG02071.hp1 HG02135.hp1 others(7): Show |
intron_variant | MODIFIER | c.686-31365_686-3136 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
C | CAAA | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.686-31366_686-3136 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
C | CAAAAA | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.686-31368_686-3136 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
C | CAAAAAA | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.686-31369_686-3136 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
CA | C | 28 | a0001c0001t0001g0001a0001c0001t0001g0008a0001c0001t0001g0009others(25): Show | 28 | HG00280.hp1 HG01167.hp1 HG01943.hp1 others(25): Show |
intron_variant | MODIFIER | c.686-31364delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
CAA | C | 16 | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0014others(13): Show | 16 | HG00140.hp1 HG01069.hp1 HG01255.hp1 others(13): Show |
intron_variant | MODIFIER | c.686-31365_686-3136 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
CAAA | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-31366_686-3136 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
CAAAAAAA others(4): Show |
C | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.686-31374_686-3136 others(15): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
CAAAAAAA others(5): Show |
C | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.686-31375_686-3136 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792784
|
CAAAAAAA others(16): Show |
C | 1 | a0001c0001t0002g0046 | 1 | HG00609.hp1 | intron_variant | MODIFIER | c.686-31386_686-3136 others(27): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | |||||
| chrY:14792840
|
A | AAG | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.686-31337_686-3133 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792840 | |||||
| chrY:14792849
|
A | AGT | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.686-31338_686-3133 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792849 | |||||
| chrY:14792851
|
A | AGAGT | 2 | a0001c0001t0001g0042a0001c0001t0001g0087 | 2 | HG01192.hp1 HG03209.hp1 |
intron_variant | MODIFIER | c.686-31336_686-3133 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | |||||
| chrY:14792851
|
A | AGAGTGT | 3 | a0001c0001t0001g0057a0001c0001t0001g0089a0001c0001t0001g0090 | 3 | HG01106.hp1 HG02055.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.686-31336_686-3133 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | |||||
| chrY:14792851
|
A | AGT | 28 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0007others(25): Show | 28 | HG00140.hp1 HG00642.hp1 HG01069.hp1 others(25): Show |
intron_variant | MODIFIER | c.686-31298_686-3129 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | |||||
| chrY:14792851
|
A | AGTGT | 30 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0008others(27): Show | 30 | HG01515.hp1 HG01928.hp1 HG01952.hp1 others(27): Show |
intron_variant | MODIFIER | c.686-31300_686-3129 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | |||||
| chrY:14792851
|
A | AGTGTGT | 5 | a0001c0001t0001g0012a0001c0001t0001g0032a0001c0001t0001g0035others(2): Show | 5 | HG01074.hp1 HG01109.hp1 HG01433.hp1 others(2): Show |
intron_variant | MODIFIER | c.686-31302_686-3129 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | |||||
| chrY:14792851
|
A | T | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.686-31337A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14792851 | ||||||
| chrY:14792851
|
AGT | A | 4 | a0001c0001t0001g0061a0001c0001t0001g0079a0001c0001t0001g0081others(1): Show | 4 | HG00738.hp1 HG02083.hp1 HG03017.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-31298_686-3129 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | |||||
| chrY:14792851
|
AGTGTGTG others(1): Show |
A | 4 | a0001c0001t0002g0027a0001c0001t0002g0045a0001c0001t0002g0119others(1): Show | 4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-31304_686-3129 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | |||||
| chrY:14792851
|
AGTGTGTG others(13): Show |
A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-31316_686-3129 others(24): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | |||||
| chrY:14792853
|
T | A | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.686-31335T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14792853 | ||||||
| chrY:14792933
|
A | T | 1 | a0001c0001t0001g0109 | 1 | NA19091.hp1 | intron_variant | MODIFIER | c.686-31255A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14792933 | ||||||
| chrY:14793446
|
C | A | 1 | a0001c0001t0002g0049 | 1 | NA19085.hp1 | intron_variant | MODIFIER | c.686-30742C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14793446 | ||||||
| chrY:14793802
|
C | G | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.686-30386C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14793802 | ||||||
| chrY:14793990
|
C | CA | 10 | a0001c0001t0001g0020a0001c0001t0001g0034a0001c0001t0001g0083others(7): Show | 10 | HG00621.hp1 HG02145.hp1 HG02258.hp1 others(7): Show |
intron_variant | MODIFIER | c.686-30173dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14793990 | |||||
| chrY:14793990
|
CA | C | 11 | a0001c0001t0001g0007a0001c0001t0001g0023a0001c0001t0001g0032others(8): Show | 11 | HG00280.hp1 HG00673.hp1 HG01074.hp1 others(8): Show |
intron_variant | MODIFIER | c.686-30173delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14793990 | |||||
| chrY:14794255
|
T | TA | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29931dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794255 | |||||
| chrY:14794258
|
T | A | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29930T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794258 | ||||||
| chrY:14794260
|
C | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29928C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794260 | ||||||
| chrY:14794267
|
TA | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29918delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794267 | |||||
| chrY:14794287
|
C | A | 1 | a0001c0001t0001g0004 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.686-29901C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794287 | ||||||
| chrY:14794312
|
G | GA | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29873dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794312 | |||||
| chrY:14794472
|
GT | G | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29711delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794472 | |||||
| chrY:14794531
|
T | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-29657T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794531 | ||||||
| chrY:14794555
|
TC | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29631delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794555 | |||||
| chrY:14794750
|
A | AG | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29438_686-2943 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794750 | ||||||
| chrY:14794753
|
GT | G | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29431delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794753 | |||||
| chrY:14794772
|
C | CA | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29415dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794772 | |||||
| chrY:14794803
|
A | G | 43 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(40): Show | 43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.686-29385A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794803 | ||||||
| chrY:14794855
|
T | TG | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29332dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794855 | |||||
| chrY:14794877
|
TA | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29303delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794877 | |||||
| chrY:14795015
|
C | T | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-29173C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14795015 | ||||||
| chrY:14795208
|
A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-28980A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14795208 | ||||||
| chrY:14796082
|
A | T | 4 | a0001c0001t0002g0027a0001c0001t0002g0045a0001c0001t0002g0119others(1): Show | 4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-28106A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796082 | ||||||
| chrY:14796544
|
G | T | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.686-27644G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796544 | ||||||
| chrY:14796571
|
T | TA | 11 | a0001c0001t0001g0034a0001c0001t0001g0057a0001c0001t0001g0063others(8): Show | 11 | HG01106.hp1 HG01255.hp1 HG01256.hp1 others(8): Show |
intron_variant | MODIFIER | c.686-27596dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796571 | |||||
| chrY:14796571
|
T | TAA | 2 | a0001c0001t0001g0030a0001c0001t0001g0039 | 2 | HG01069.hp1 homoSapiens_chm13v2.hp1 |
intron_variant | MODIFIER | c.686-27597_686-2759 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796571 | |||||
| chrY:14796571
|
T | TAAA | 1 | a0001c0001t0001g0038 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.686-27598_686-2759 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796571 | |||||
| chrY:14796571
|
TA | T | 2 | a0001c0001t0001g0076a0001c0002t0001g0003 | 2 | HG04115.hp1 NA19063.hp1 |
intron_variant | MODIFIER | c.686-27596delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796571 | |||||
| chrY:14796589
|
A | G | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.686-27599A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796589 | ||||||
| chrY:14796721
|
G | C | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.686-27467G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796721 | ||||||
| chrY:14796783
|
CAA | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-27403_686-2740 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796783 | |||||
| chrY:14796969
|
T | A | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.686-27219T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796969 | ||||||
| chrY:14797298
|
C | CT | 2 | a0001c0001t0001g0012a0001c0001t0004g0114 | 2 | HG02647.hp1 NA19082.hp1 |
intron_variant | MODIFIER | c.686-26874dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14797298 | |||||
| chrY:14797298
|
CT | C | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.686-26874delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14797298 | |||||
| chrY:14797364
|
T | G | 1 | a0001c0001t0001g0034 | 1 | HG04204.hp1 | intron_variant | MODIFIER | c.686-26824T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14797364 | ||||||
| chrY:14797838
|
T | C | 1 | a0001c0001t0001g0068 | 1 | HG02738.hp1 | intron_variant | MODIFIER | c.686-26350T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14797838 | ||||||
| chrY:14798209
|
G | A | 2 | a0001c0001t0001g0034a0001c0001t0001g0075 | 2 | HG02602.hp1 HG04204.hp1 |
intron_variant | MODIFIER | c.686-25979G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14798209 | ||||||
| chrY:14800584
|
A | C | 6 | a0001c0001t0001g0023a0001c0001t0001g0082a0001c0001t0001g0115others(3): Show | 6 | HG02572.hp1 HG03098.hp1 NA18971.hp1 others(3): Show |
intron_variant | MODIFIER | c.686-23604A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14800584 | ||||||
| chrY:14800843
|
T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-23345T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14800843 | ||||||
| chrY:14801233
|
G | A | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.686-22955G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14801233 | ||||||
| chrY:14801542
|
C | CA | 2 | a0001c0001t0001g0076a0001c0001t0002g0101 | 2 | HG04115.hp1 NA18994.hp1 |
intron_variant | MODIFIER | c.686-22625dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14801542 | |||||
| chrY:14801542
|
CA | C | 41 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(38): Show | 41 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(38): Show |
intron_variant | MODIFIER | c.686-22625delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14801542 | |||||
| chrY:14801542
|
CAA | C | 2 | a0001c0001t0001g0086a0001c0001t0001g0089 | 2 | HG02895.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.686-22626_686-2262 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14801542 | |||||
| chrY:14801562
|
A | AG | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-22626_686-2262 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14801562 | ||||||
| chrY:14801562
|
A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-22626A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14801562 | ||||||
| chrY:14801797
|
C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-22391C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14801797 | ||||||
| chrY:14802084
|
TC | T | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.686-22101delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14802084 | |||||
| chrY:14802522
|
A | G | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-21666A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14802522 | ||||||
| chrY:14802672
|
TTTTAAAT others(36): Show |
T | 98 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(95): Show | 98 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(95): Show |
intron_variant | MODIFIER | c.686-21505_686-2146 others(47): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14802672 | |||||
| chrY:14803618
|
T | G | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.686-20570T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14803618 | ||||||
| chrY:14803921
|
C | T | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.686-20267C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14803921 | ||||||
| chrY:14804195
|
CA | C | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.686-19991delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14804195 | |||||
| chrY:14804709
|
C | A | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.686-19479C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14804709 | ||||||
| chrY:14806148
|
A | G | 1 | a0001c0001t0002g0045 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.686-18040A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14806148 | ||||||
| chrY:14806233
|
T | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-17955T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14806233 | ||||||
| chrY:14806837
|
G | GA | 3 | a0001c0001t0001g0036a0001c0001t0001g0112a0001c0001t0002g0053 | 3 | HG00140.hp1 HG01167.hp1 HG02027.hp1 |
intron_variant | MODIFIER | c.686-17340dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14806837 | |||||
| chrY:14806991
|
A | T | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.686-17197A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14806991 | ||||||
| chrY:14807416
|
T | C | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.686-16772T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14807416 | ||||||
| chrY:14808712
|
A | G | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.686-15476A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14808712 | ||||||
| chrY:14809466
|
C | CA | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.686-14715dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14809466 | |||||
| chrY:14809551
|
AT | A | 1 | a0001c0001t0001g0009 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.686-14623delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14809551 | |||||
| chrY:14809958
|
C | A | 1 | a0001c0001t0002g0052 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.686-14230C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14809958 | ||||||
| chrY:14810903
|
T | C | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.686-13285T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14810903 | ||||||
| chrY:14811790
|
A | G | 2 | a0001c0001t0001g0032a0001c0001t0001g0035 | 2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.686-12398A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14811790 | ||||||
| chrY:14812758
|
T | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-11430T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14812758 | ||||||
| chrY:14812832
|
CT | C | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.686-11352delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14812832 | |||||
| chrY:14812926
|
TCTTC | T | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.686-11248_686-1124 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14812926 | |||||
| chrY:14812935
|
C | T | 1 | a0001c0001t0001g0121 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.686-11253C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14812935 | ||||||
| chrY:14812966
|
C | T | 3 | a0001c0001t0001g0063a0001c0001t0001g0064a0001c0001t0001g0065 | 3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.686-11222C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14812966 | ||||||
| chrY:14813220
|
C | T | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.686-10968C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14813220 | ||||||
| chrY:14813423
|
G | A | 2 | a0001c0001t0001g0032a0001c0001t0001g0035 | 2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.686-10765G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14813423 | ||||||
| chrY:14813829
|
T | C | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.686-10359T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14813829 | ||||||
| chrY:14814004
|
A | C | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.686-10184A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14814004 | ||||||
| chrY:14814358
|
C | A | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.686-9830C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14814358 | ||||||
| chrY:14814373
|
G | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-9815G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14814373 | ||||||
| chrY:14814427
|
A | G | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.686-9761A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14814427 | ||||||
| chrY:14815202
|
A | T | 12 | a0001c0001t0001g0083a0001c0001t0001g0084a0001c0001t0001g0085others(9): Show | 12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.686-8986A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14815202 | ||||||
| chrY:14815946
|
T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-8242T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14815946 | ||||||
| chrY:14816587
|
G | T | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.686-7601G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14816587 | ||||||
| chrY:14816865
|
A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-7323A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14816865 | ||||||
| chrY:14817390
|
C | T | 3 | a0001c0001t0001g0028a0001c0001t0001g0031a0001c0001t0001g0037 | 3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.686-6798C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14817390 | ||||||
| chrY:14817887
|
C | G | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.686-6301C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14817887 | ||||||
| chrY:14817956
|
G | A | 1 | a0001c0001t0002g0050 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.686-6232G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14817956 | ||||||
| chrY:14818067
|
C | A | 15 | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0008others(12): Show | 15 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(12): Show |
intron_variant | MODIFIER | c.686-6121C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14818067 | ||||||
| chrY:14818150
|
G | A | 2 | a0001c0001t0001g0082a0001c0001t0001g0117 | 2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.686-6038G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14818150 | ||||||
| chrY:14818962
|
T | C | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.686-5226T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14818962 | ||||||
| chrY:14819640
|
T | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-4548T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14819640 | ||||||
| chrY:14820055
|
C | T | 1 | a0001c0001t0002g0045 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.686-4133C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14820055 | ||||||
| chrY:14820301
|
C | T | 5 | a0001c0001t0001g0109a0001c0001t0001g0111a0001c0001t0001g0115others(2): Show | 5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.686-3887C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14820301 | ||||||
| chrY:14820835
|
G | C | 1 | a0001c0001t0002g0078 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.686-3353G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14820835 | ||||||
| chrY:14821435
|
C | G | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-2753C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14821435 | ||||||
| chrY:14822051
|
G | T | 7 | a0001c0001t0001g0034a0001c0001t0001g0054a0001c0001t0001g0066others(4): Show | 7 | HG02602.hp1 HG02738.hp1 HG03490.hp1 others(4): Show |
intron_variant | MODIFIER | c.686-2137G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14822051 | ||||||
| chrY:14822724
|
G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-1464G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14822724 | ||||||
| chrY:14823021
|
G | GA | 2 | a0001c0001t0001g0109a0001c0001t0001g0111 | 2 | NA18612.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.686-1157dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14823021 | |||||
| chrY:14823496
|
AG | A | 3 | a0001c0001t0001g0087a0001c0001t0001g0089a0001c0001t0001g0090 | 3 | HG02055.hp1 HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.686-691delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14823496 | ||||||
| chrY:14825285
|
CTCTG | C | 3 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0057 | 3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.871+916_871+919del others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14825285 | |||||
| chrY:14825672
|
ACACTTTT others(19): Show |
A | 6 | a0001c0001t0001g0030a0001c0001t0001g0038a0001c0001t0001g0039others(3): Show | 6 | HG01069.hp1 HG01255.hp1 HG01256.hp1 others(3): Show |
intron_variant | MODIFIER | c.871+1300_871+1325d others(28): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14825672 | ||||||
| chrY:14825693
|
C | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.871+1320C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14825693 | ||||||
| chrY:14826013
|
G | A | 18 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0007others(15): Show | 18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.871+1640G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826013 | ||||||
| chrY:14826024
|
A | G | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.871+1651A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826024 | ||||||
| chrY:14826338
|
C | CT | 5 | a0001c0001t0001g0002a0001c0001t0001g0084a0001c0001t0001g0085others(2): Show | 5 | HG02486.hp1 HG02965.hp1 HG03139.hp1 others(2): Show |
intron_variant | MODIFIER | c.871+1984dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14826338 | |||||
| chrY:14826338
|
C | CTTTT | 2 | a0001c0001t0001g0115a0001c0001t0001g0116 | 2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.871+1981_871+1984d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14826338 | |||||
| chrY:14826338
|
CT | C | 8 | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0023others(5): Show | 8 | HG01099.hp1 HG02647.hp1 HG03225.hp1 others(5): Show |
intron_variant | MODIFIER | c.871+1984delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14826338 | |||||
| chrY:14826343
|
T | C | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.871+1970T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826343 | ||||||
| chrY:14826455
|
G | A | 1 | a0001c0001t0002g0052 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.871+2082G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826455 | ||||||
| chrY:14826932
|
A | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.871+2559A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826932 | ||||||
| chrY:14827526
|
C | A | 104 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(101): Show | 104 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(101): Show |
intron_variant | MODIFIER | c.872-2204C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14827526 | ||||||
| chrY:14827914
|
A | T | 2 | a0001c0001t0001g0036a0001c0001t0001g0112 | 2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.872-1816A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14827914 | ||||||
| chrY:14827936
|
A | G | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.872-1794A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14827936 | ||||||
| chrY:14828244
|
A | G | 4 | a0001c0001t0002g0027a0001c0001t0002g0045a0001c0001t0002g0119others(1): Show | 4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.872-1486A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14828244 | ||||||
| chrY:14828358
|
C | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.872-1372C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14828358 | ||||||
| chrY:14828416
|
C | T | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.872-1314C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14828416 | ||||||
| chrY:14829017
|
T | TA | 1 | a0001c0001t0002g0119 | 1 | HG02135.hp1 | intron_variant | MODIFIER | c.872-702dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14829017 | |||||
| chrY:14829023
|
A | C | 3 | a0001c0001t0001g0032a0001c0001t0001g0035a0001c0001t0001g0092 | 3 | HG01074.hp1 HG01109.hp1 HG03130.hp1 |
intron_variant | MODIFIER | c.872-707A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14829023 | ||||||
| chrY:14829056
|
A | T | 2 | a0001c0001t0001g0007a0001c0001t0001g0018 | 2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.872-674A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14829056 | ||||||
| chrY:14829508
|
C | CGT | 23 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(20): Show | 23 | HG00280.hp1 HG02647.hp1 NA18747.hp1 others(20): Show |
intron_variant | MODIFIER | c.872-201_872-200dup others(2): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14829508 | |||||
| chrY:14830531
|
T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.1661+12T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14830531 | ||||||
| chrY:14830684
|
A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.1661+165A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14830684 | ||||||
| chrY:14832173
|
C | T | 104 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(101): Show | 104 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(101): Show |
intron_variant | MODIFIER | c.1661+1654C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14832173 | ||||||
| chrY:14832823
|
C | T | 2 | a0001c0001t0001g0054a0001c0001t0001g0066 | 2 | HG03490.hp1 HG03492.hp1 |
intron_variant | MODIFIER | c.1661+2304C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14832823 | ||||||
| chrY:14833093
|
G | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.1661+2574G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14833093 | ||||||
| chrY:14833622
|
C | T | 1 | a0001c0001t0001g0081 | 1 | NA18747.hp1 | intron_variant | MODIFIER | c.1661+3103C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14833622 | ||||||
| chrY:14833993
|
A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.1661+3474A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14833993 | ||||||
| chrY:14834003
|
T | TA | 2 | a0001c0001t0001g0092a0001c0001t0002g0033 | 2 | HG02015.hp1 HG03130.hp1 |
intron_variant | MODIFIER | c.1661+3499dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14834003 | |||||
| chrY:14834003
|
TA | T | 2 | a0001c0001t0001g0002a0001c0001t0001g0058 | 2 | HG01943.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.1661+3499delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14834003 | |||||
| chrY:14834014
|
A | G | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.1661+3495A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834014 | ||||||
| chrY:14834104
|
T | C | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.1661+3585T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834104 | ||||||
| chrY:14834133
|
C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.1661+3614C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834133 | ||||||
| chrY:14834156
|
C | T | 3 | a0001c0001t0001g0109a0001c0001t0001g0111a0002c0003t0001g0110 | 3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.1661+3637C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834156 | ||||||
| chrY:14834646
|
G | A | 2 | a0001c0001t0002g0046a0001c0001t0002g0047 | 2 | HG00609.hp1 NA18982.hp1 |
intron_variant | MODIFIER | c.1661+4127G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834646 | ||||||
| chrY:14835021
|
A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.1661+4502A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14835021 | ||||||
| chrY:14835793
|
G | T | 1 | a0001c0001t0001g0085 | 1 | HG03139.hp1 | intron_variant | MODIFIER | c.1662-4620G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14835793 | ||||||
| chrY:14836483
|
C | CT | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.1662-3916dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14836483 | |||||
| chrY:14836978
|
C | A | 1 | a0001c0001t0002g0047 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.1662-3435C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14836978 | ||||||
| chrY:14836979
|
A | T | 1 | a0001c0001t0002g0047 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.1662-3434A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14836979 | ||||||
| chrY:14837047
|
A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.1662-3366A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14837047 | ||||||
| chrY:14837079
|
GA | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.1662-3328delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14837079 | |||||
| chrY:14837516
|
A | T | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.1662-2897A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14837516 | ||||||
| chrY:14837673
|
T | C | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.1662-2740T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14837673 | ||||||
| chrY:14838223
|
TAG | T | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.1662-2188_1662-218 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14838223 | |||||
| chrY:14838227
|
C | T | 2 | a0001c0001t0003g0025a0001c0001t0003g0026 | 2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.1662-2186C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14838227 | ||||||
| chrY:14839562
|
G | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.1662-851G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14839562 | ||||||
| chrY:14839995
|
A | G | 15 | a0001c0001t0002g0094a0001c0001t0002g0095a0001c0001t0002g0096others(12): Show | 15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.1662-418A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14839995 | ||||||
| chrY:14840059
|
A | G | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.1662-354A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14840059 |