Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 22829 |
| ensemblid | ENSG00000165246.15 |
| hgncid | 15529 |
| symbol | NLGN4Y |
| name | neuroligin 4 Y-linked |
| refseq_nuc | NM_001365588.1 |
| refseq_prot | NP_001352517.1 |
| ensembl_nuc | ENST00000684976.1 |
| ensembl_prot | ENSP00000510011.1 |
| mane_status | MANE Select |
| chr | chrY |
| start | 14524529 |
| end | 14845654 |
| strand | + |
| ver | v1.2 |
| region | chrY:14524529-14845654 |
| region5000 | chrY:14519529-14850654 |
| regionname0 | NLGN4Y_chrY_14524529_14845654 |
| regionname5000 | NLGN4Y_chrY_14519529_14850654 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 836 | 120 | 18 | 20 | 60 | 5 | 15 | 45 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | MLRPQ others(831): Show |
chrY | 14519529 | 14850654 |
| a0002 | 0/0 | 836 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | MLRPQ others(831): Show |
chrY | 14519529 | 14850654 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 2508 | 118 | 18 | 20 | 58 | 5 | 15 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ATGTT others(2503): Show |
chrY | 14519529 | 14850654 | ||
| a0001c0002 | 0/0 | 2508 | 2 | 0 | 0 | 2 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ATGTT others(2503): Show |
chrY | 14519529 | 14850654 | ||
| a0002c0003 | 0/0 | 2508 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ATGTT others(2503): Show |
chrY | 14519529 | 14850654 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/1 | 7194 | 81 | 16 | 20 | 23 | 5 | 15 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ACAGT others(7189): Show |
chrY | 14519529 | 14850654 |
| a0001c0001t0002 | 0/0 | 7194 | 33 | 0 | 0 | 33 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ACAGT others(7189): Show |
chrY | 14519529 | 14850654 |
| a0001c0001t0003 | 0/0 | 7194 | 2 | 0 | 0 | 2 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ACAGT others(7189): Show |
chrY | 14519529 | 14850654 |
| a0001c0001t0004 | 0/0 | 7198 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ACAGT others(7193): Show |
chrY | 14519529 | 14850654 |
| a0001c0001t0005 | 0/0 | 7194 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ACAGT others(7189): Show |
chrY | 14519529 | 14850654 |
| a0001c0002t0001 | 0/0 | 7194 | 2 | 0 | 0 | 2 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ACAGT others(7189): Show |
chrY | 14519529 | 14850654 |
| a0002c0003t0001 | 0/0 | 7194 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | ACAGT others(7189): Show |
chrY | 14519529 | 14850654 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0002 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0004 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0006 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0007 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0008 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0009 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0010 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0011 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0012 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0013 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0014 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0015 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0016 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0018 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0022 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0023 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0028 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0031 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0032 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0034 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0035 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0036 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0037 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0038 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0039 | 0/1 | 1 | 0 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0041 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0042 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0043 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0055 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0056 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0057 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0059 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0060 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0061 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0062 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0063 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0064 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0065 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0066 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0067 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0068 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0069 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0070 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0071 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0072 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0073 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0074 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0075 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0076 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0079 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0080 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0081 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0082 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0083 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0084 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0085 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0087 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0088 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0089 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0091 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0092 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0093 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0108 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0109 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0111 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0112 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0113 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0115 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0116 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0117 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0001g0121 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0027 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0047 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0049 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0094 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0095 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0096 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0097 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0098 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0099 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0100 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0101 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0102 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0103 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0104 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0105 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0106 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0107 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0118 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0002g0120 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0003g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0003g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0004g0114 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0001t0005g0077 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0002t0001g0003 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0001c0002t0001g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| a0002c0003t0001g0110 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00140 | hp1 | a0001 | c0001 | t0001 | g0036 | EUR | GBR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00280 | hp1 | a0001 | c0001 | t0001 | g0080 | EUR | FIN | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00609 | hp1 | a0001 | c0001 | t0002 | g0046 | EAS | CHS | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00621 | hp1 | a0001 | c0001 | t0002 | g0050 | EAS | CHS | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00642 | hp1 | a0001 | c0001 | t0001 | g0056 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00673 | hp1 | a0001 | c0001 | t0002 | g0027 | EAS | CHS | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0061 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0030 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0032 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01099 | hp1 | a0001 | c0001 | t0001 | g0028 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01106 | hp1 | a0001 | c0001 | t0001 | g0057 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0035 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0112 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01192 | hp1 | a0001 | c0001 | t0001 | g0042 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01243 | hp1 | a0001 | c0001 | t0001 | g0073 | AMR | PUR | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01255 | hp1 | a0001 | c0001 | t0001 | g0065 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01256 | hp1 | a0001 | c0001 | t0001 | g0064 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0063 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01261 | hp1 | a0001 | c0001 | t0001 | g0069 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0072 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0038 | AMR | CLM | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01515 | hp1 | a0001 | c0001 | t0001 | g0071 | EUR | IBS | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01928 | hp1 | a0001 | c0001 | t0001 | g0074 | AMR | PEL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01934 | hp1 | a0001 | c0001 | t0001 | g0070 | AMR | PEL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0058 | AMR | PEL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0062 | AMR | PEL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02015 | hp1 | a0001 | c0001 | t0002 | g0033 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02027 | hp1 | a0001 | c0001 | t0002 | g0053 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0021 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02055 | hp1 | a0001 | c0001 | t0001 | g0090 | AFR | ACB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02056 | hp1 | a0001 | c0001 | t0002 | g0078 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02071 | hp1 | a0001 | c0001 | t0002 | g0045 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02074 | hp1 | a0001 | c0001 | t0002 | g0024 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02083 | hp1 | a0001 | c0001 | t0003 | g0025 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02129 | hp1 | a0001 | c0001 | t0002 | g0120 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02132 | hp1 | a0001 | c0001 | t0001 | g0022 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02135 | hp1 | a0001 | c0001 | t0002 | g0119 | EAS | KHV | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02145 | hp1 | a0001 | c0001 | t0001 | g0083 | AFR | ACB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02258 | hp1 | a0001 | c0001 | t0001 | g0121 | AFR | ACB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0082 | AFR | GWD | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02602 | hp1 | a0001 | c0001 | t0001 | g0075 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02647 | hp1 | a0001 | c0001 | t0004 | g0114 | AFR | GWD | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02698 | hp1 | a0001 | c0001 | t0001 | g0113 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02717 | hp1 | a0001 | c0001 | t0001 | g0088 | AFR | GWD | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0055 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02738 | hp1 | a0001 | c0001 | t0001 | g0068 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02895 | hp1 | a0001 | c0001 | t0001 | g0086 | AFR | GWD | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02965 | hp1 | a0001 | c0001 | t0001 | g0084 | AFR | ESN | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0079 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0117 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03130 | hp1 | a0001 | c0001 | t0001 | g0092 | AFR | ESN | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03139 | hp1 | a0001 | c0001 | t0001 | g0085 | AFR | ESN | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0087 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03225 | hp1 | a0001 | c0001 | t0005 | g0077 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03490 | hp1 | a0001 | c0001 | t0001 | g0054 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03492 | hp1 | a0001 | c0001 | t0001 | g0066 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0037 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03654 | hp1 | a0001 | c0001 | t0001 | g0108 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0043 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0031 | SAS | PJL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG04115 | hp1 | a0001 | c0001 | t0001 | g0076 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0041 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0034 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0067 | SAS | STU | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0089 | AFR | YRI | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0111 | EAS | CHB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0081 | EAS | CHB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18940 | hp1 | a0001 | c0001 | t0001 | g0018 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18943 | hp1 | a0001 | c0001 | t0002 | g0105 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0006 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18945 | hp1 | a0001 | c0001 | t0002 | g0051 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18952 | hp1 | a0001 | c0001 | t0001 | g0016 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18953 | hp1 | a0001 | c0001 | t0002 | g0107 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18959 | hp1 | a0001 | c0001 | t0002 | g0029 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18960 | hp1 | a0001 | c0001 | t0001 | g0020 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0019 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18962 | hp1 | a0001 | c0001 | t0002 | g0094 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18965 | hp1 | a0001 | c0001 | t0002 | g0100 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18966 | hp1 | a0001 | c0001 | t0001 | g0017 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0013 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0015 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0115 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0116 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18977 | hp1 | a0001 | c0001 | t0002 | g0096 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18982 | hp1 | a0001 | c0001 | t0002 | g0047 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18983 | hp1 | a0001 | c0001 | t0001 | g0010 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18984 | hp1 | a0001 | c0001 | t0002 | g0044 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18986 | hp1 | a0001 | c0001 | t0002 | g0095 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0011 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18990 | hp1 | a0001 | c0001 | t0002 | g0104 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18994 | hp1 | a0001 | c0001 | t0002 | g0101 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA18995 | hp1 | a0001 | c0002 | t0001 | g0005 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19000 | hp1 | a0001 | c0001 | t0002 | g0102 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19004 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19005 | hp1 | a0001 | c0001 | t0002 | g0098 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19007 | hp1 | a0001 | c0001 | t0002 | g0097 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19009 | hp1 | a0001 | c0001 | t0003 | g0026 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0023 | AFR | LWK | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19058 | hp1 | a0001 | c0001 | t0001 | g0014 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19060 | hp1 | a0001 | c0001 | t0002 | g0118 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19062 | hp1 | a0001 | c0001 | t0002 | g0048 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19063 | hp1 | a0001 | c0002 | t0001 | g0003 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19066 | hp1 | a0001 | c0001 | t0002 | g0106 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19070 | hp1 | a0001 | c0001 | t0002 | g0099 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19079 | hp1 | a0002 | c0003 | t0001 | g0110 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19082 | hp1 | a0001 | c0001 | t0001 | g0012 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19083 | hp1 | a0001 | c0001 | t0002 | g0040 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19085 | hp1 | a0001 | c0001 | t0002 | g0049 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19086 | hp1 | a0001 | c0001 | t0002 | g0052 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19088 | hp1 | a0001 | c0001 | t0002 | g0103 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA19091 | hp1 | a0001 | c0001 | t0001 | g0109 | EAS | JPT | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA20752 | hp1 | a0001 | c0001 | t0001 | g0059 | EUR | TSI | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0002 | SAS | GIH | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG02486 | hp1 | a0001 | c0001 | t0001 | g0091 | AFR | ACB | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| HG03471 | hp1 | a0001 | c0001 | t0001 | g0093 | AFR | MSL | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| homoSapiens | chm13v2 | a0001 | c0001 | t0001 | g0039 | REF | REF | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| homoSapiens | grch38p0 | a0001 | c0001 | t0001 | g0060 | REF | REF | NLGN4Y_chrY_14519529_14850654 | NLGN4Y | chrY | 14519529 | 14850654 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:14622316 | T | C | 1 | a0002 | 1 | NA19079.hp1 | missense_variant | MODERATE | c.197T>C | p.Ile66Thr | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/7 | 488/7194 | 197/2511 | 66/836 | chrY | 14622316 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:14723127 | A | G | 1 | a0001c0002 | 2 | NA18995.hp1 NA19063.hp1 |
synonymous_variant | LOW | c.543A>G | p.Glu181Glu | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/7 | 834/7194 | 543/2511 | 181/836 | chrY | 14723127 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:14841746 | A | G | 1 | a0001c0001t0005 | 1 | HG03225.hp1 | 3_prime_UTR_variant | MODIFIER | c.*484A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 7/7 | 484 | chrY | 14841746 | ||||||
| chrY:14842230 | A | T | 2 | a0001c0001t0002 a0001c0001t0003 |
35 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(32): Show |
3_prime_UTR_variant | MODIFIER | c.*968A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 7/7 | 968 | chrY | 14842230 | ||||||
| chrY:14842485 | G | A | 1 | a0001c0001t0003 | 2 | HG02083.hp1 NA19009.hp1 |
3_prime_UTR_variant | MODIFIER | c.*1223G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 7/7 | 1223 | chrY | 14842485 | ||||||
| chrY:14845174 | T | TTAAG | 1 | a0001c0001t0004 | 1 | HG02647.hp1 | 3_prime_UTR_variant | MODIFIER | c.*3913_*3914insAAGT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 7/7 | 3914 | INFO_REALIGN_3_PRIME | chrY | 14845174 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY:14524963 | C | T | 1 | a0001c0001t0001g0121 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.-112+255C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14524963 | |||||||
| chrY:14525232 | A | G | 2 | a0001c0001t0002g0119 a0001c0001t0002g0120 |
2 | HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.-112+524A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14525232 | |||||||
| chrY:14526077 | A | T | 1 | a0001c0001t0002g0118 | 1 | NA19060.hp1 | intron_variant | MODIFIER | c.-112+1369A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14526077 | |||||||
| chrY:14526275 | G | C | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.-112+1567G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14526275 | |||||||
| chrY:14526436 | C | CTG | 3 | a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 |
3 | HG03098.hp1 NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+1752_-112+175 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14526436 | ||||||
| chrY:14526436 | CTG | C | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-112+1752_-112+175 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14526436 | ||||||
| chrY:14526578 | T | TTG | 2 | a0001c0001t0001g0113 a0001c0001t0004g0114 |
2 | HG02647.hp1 HG02698.hp1 |
intron_variant | MODIFIER | c.-112+1888_-112+188 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14526578 | ||||||
| chrY:14526924 | A | G | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+2216A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14526924 | |||||||
| chrY:14527109 | T | C | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-112+2401T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14527109 | |||||||
| chrY:14527555 | A | G | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-112+2847A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14527555 | |||||||
| chrY:14527902 | TC | T | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.-112+3195delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14527902 | |||||||
| chrY:14528421 | G | T | 15 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(12): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.-112+3713G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14528421 | |||||||
| chrY:14528949 | G | T | 15 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(12): Show |
15 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(12): Show |
intron_variant | MODIFIER | c.-112+4241G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14528949 | |||||||
| chrY:14529334 | A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+4626A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14529334 | |||||||
| chrY:14529506 | C | T | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-112+4798C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14529506 | |||||||
| chrY:14529651 | T | TC | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.-112+4945dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14529651 | ||||||
| chrY:14529992 | C | CAT | 5 | a0001c0001t0001g0006 a0001c0001t0001g0021 a0001c0001t0001g0109 others(2): Show |
5 | HG02040.hp1 NA18612.hp1 NA18944.hp1 others(2): Show |
intron_variant | MODIFIER | c.-112+5307_-112+530 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14529992 | ||||||
| chrY:14529992 | CATAT | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+5305_-112+530 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14529992 | ||||||
| chrY:14530630 | G | C | 2 | a0001c0001t0001g0022 a0001c0001t0001g0113 |
2 | HG02132.hp1 HG02698.hp1 |
intron_variant | MODIFIER | c.-112+5922G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14530630 | |||||||
| chrY:14531367 | T | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-112+6659T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14531367 | |||||||
| chrY:14531394 | A | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+6686A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14531394 | |||||||
| chrY:14532367 | A | T | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-112+7659A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14532367 | |||||||
| chrY:14532446 | C | G | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.-112+7738C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14532446 | |||||||
| chrY:14532570 | T | C | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-112+7862T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14532570 | |||||||
| chrY:14533243 | C | CT | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+8544dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14533243 | ||||||
| chrY:14533322 | C | T | 2 | a0001c0001t0001g0080 a0001c0001t0001g0081 |
2 | HG00280.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-112+8614C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14533322 | |||||||
| chrY:14533713 | G | C | 3 | a0001c0001t0002g0024 a0001c0001t0003g0025 a0001c0001t0003g0026 |
3 | HG02074.hp1 HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.-112+9005G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14533713 | |||||||
| chrY:14533778 | G | T | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-112+9070G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14533778 | |||||||
| chrY:14534179 | C | A | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-112+9471C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14534179 | |||||||
| chrY:14534215 | G | A | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-112+9507G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14534215 | |||||||
| chrY:14534316 | C | T | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-112+9608C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14534316 | |||||||
| chrY:14534768 | C | CGT | 57 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0021 others(54): Show |
57 | HG00140.hp1 HG00609.hp1 HG00621.hp1 others(54): Show |
intron_variant | MODIFIER | c.-112+10097_-112+10 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | ||||||
| chrY:14534768 | C | CGTGT | 9 | a0001c0001t0001g0004 a0001c0001t0001g0019 a0001c0001t0001g0028 others(6): Show |
9 | HG00280.hp1 HG01099.hp1 HG02074.hp1 others(6): Show |
intron_variant | MODIFIER | c.-112+10095_-112+10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | ||||||
| chrY:14534768 | C | CGTGTGT | 7 | a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 others(4): Show |
7 | HG01167.hp1 NA18940.hp1 NA18952.hp1 others(4): Show |
intron_variant | MODIFIER | c.-112+10093_-112+10 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | ||||||
| chrY:14534768 | C | CGTGTGTG others(1): Show |
9 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(6): Show |
9 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(6): Show |
intron_variant | MODIFIER | c.-112+10091_-112+10 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | ||||||
| chrY:14534768 | CGT | C | 2 | a0001c0001t0002g0078 a0001c0001t0005g0077 |
2 | HG02056.hp1 HG03225.hp1 |
intron_variant | MODIFIER | c.-112+10097_-112+10 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | ||||||
| chrY:14534768 | CGTGT | C | 5 | a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0115 others(2): Show |
5 | HG03654.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.-112+10095_-112+10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | ||||||
| chrY:14534768 | CGTGTGTG others(1): Show |
C | 1 | a0001c0001t0001g0111 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.-112+10091_-112+10 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14534768 | ||||||
| chrY:14534806 | T | TGTG | 1 | a0001c0001t0002g0027 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.-112+10098_-112+10 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14534806 | |||||||
| chrY:14535427 | A | C | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.-112+10719A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14535427 | |||||||
| chrY:14535930 | GATTTATT others(15): Show |
G | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-112+11224_-112+11 others(28): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14535930 | ||||||
| chrY:14536177 | A | G | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-112+11469A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14536177 | |||||||
| chrY:14536235 | G | GT | 34 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 others(31): Show |
34 | HG00280.hp1 HG01192.hp1 HG01243.hp1 others(31): Show |
intron_variant | MODIFIER | c.-112+11556dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14536235 | ||||||
| chrY:14536235 | G | GTT | 18 | a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0018 others(15): Show |
18 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(15): Show |
intron_variant | MODIFIER | c.-112+11555_-112+11 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14536235 | ||||||
| chrY:14536235 | G | GTTT | 2 | a0001c0001t0002g0052 a0001c0001t0002g0053 |
2 | HG02027.hp1 NA19086.hp1 |
intron_variant | MODIFIER | c.-112+11554_-112+11 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14536235 | ||||||
| chrY:14536235 | GT | G | 12 | a0001c0001t0001g0023 a0001c0001t0001g0030 a0001c0001t0001g0054 others(9): Show |
12 | HG01069.hp1 HG02486.hp1 HG02717.hp1 others(9): Show |
intron_variant | MODIFIER | c.-112+11556delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14536235 | ||||||
| chrY:14536784 | C | G | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.-112+12076C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14536784 | |||||||
| chrY:14537600 | C | A | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+12892C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14537600 | |||||||
| chrY:14539152 | G | A | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.-112+14444G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14539152 | |||||||
| chrY:14539553 | C | CT | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-112+14861dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14539553 | ||||||
| chrY:14539553 | CT | C | 2 | a0001c0001t0001g0054 a0001c0001t0001g0055 |
2 | HG02735.hp1 HG03490.hp1 |
intron_variant | MODIFIER | c.-112+14861delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14539553 | ||||||
| chrY:14540099 | G | GGT | 4 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0023 others(1): Show |
4 | HG02735.hp1 NA19043.hp1 NA20805.hp1 others(1): Show |
intron_variant | MODIFIER | c.-112+15415_-112+15 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14540099 | ||||||
| chrY:14540124 | G | GT | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.-112+15416_-112+15 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14540124 | |||||||
| chrY:14540134 | C | CG | 2 | a0001c0001t0001g0043 a0001c0001t0001g0116 |
2 | HG03688.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+15434dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14540134 | ||||||
| chrY:14540138 | G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-112+15430G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14540138 | |||||||
| chrY:14540804 | C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-112+16096C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14540804 | |||||||
| chrY:14541082 | A | G | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-112+16374A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14541082 | |||||||
| chrY:14543106 | TATGTACC others(5): Show |
T | 1 | a0001c0001t0002g0027 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.-112+18404_-112+18 others(18): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14543106 | ||||||
| chrY:14544139 | G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-112+19431G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14544139 | |||||||
| chrY:14544244 | C | G | 1 | a0001c0001t0001g0035 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.-112+19536C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14544244 | |||||||
| chrY:14544271 | C | T | 1 | a0001c0001t0002g0120 | 1 | HG02129.hp1 | intron_variant | MODIFIER | c.-112+19563C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14544271 | |||||||
| chrY:14544778 | C | CT | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.-112+20084dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14544778 | ||||||
| chrY:14544778 | C | CTT | 2 | a0001c0001t0001g0069 a0001c0001t0001g0070 |
2 | HG01261.hp1 HG01934.hp1 |
intron_variant | MODIFIER | c.-112+20083_-112+20 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14544778 | ||||||
| chrY:14544931 | T | TC | 1 | a0001c0001t0002g0078 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.-112+20229dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14544931 | ||||||
| chrY:14545535 | T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+20827T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14545535 | |||||||
| chrY:14545724 | G | C | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.-112+21016G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14545724 | |||||||
| chrY:14546095 | G | A | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-112+21387G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14546095 | |||||||
| chrY:14546096 | G | A | 2 | a0001c0001t0001g0030 a0001c0001t0001g0038 |
2 | HG01069.hp1 HG01433.hp1 |
intron_variant | MODIFIER | c.-112+21388G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14546096 | |||||||
| chrY:14546362 | T | C | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.-112+21654T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14546362 | |||||||
| chrY:14546442 | T | C | 1 | a0001c0001t0002g0045 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.-112+21734T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14546442 | |||||||
| chrY:14547230 | G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-112+22522G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14547230 | |||||||
| chrY:14547489 | C | T | 7 | a0001c0001t0001g0034 a0001c0001t0001g0054 a0001c0001t0001g0066 others(4): Show |
7 | HG02602.hp1 HG02738.hp1 HG03490.hp1 others(4): Show |
intron_variant | MODIFIER | c.-112+22781C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14547489 | |||||||
| chrY:14548000 | G | A | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.-112+23292G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14548000 | |||||||
| chrY:14548481 | A | C | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+23773A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14548481 | |||||||
| chrY:14549116 | TC | T | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-112+24411delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14549116 | ||||||
| chrY:14549227 | T | G | 43 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(40): Show |
43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.-112+24519T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14549227 | |||||||
| chrY:14549674 | G | T | 2 | a0001c0001t0001g0007 a0001c0001t0001g0018 |
2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.-112+24966G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14549674 | |||||||
| chrY:14549763 | G | C | 5 | a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0016 others(2): Show |
5 | NA18940.hp1 NA18952.hp1 NA18961.hp1 others(2): Show |
intron_variant | MODIFIER | c.-112+25055G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14549763 | |||||||
| chrY:14549784 | G | GC | 43 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(40): Show |
43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.-112+25076_-112+25 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14549784 | |||||||
| chrY:14550306 | TC | T | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.-112+25604delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14550306 | ||||||
| chrY:14550671 | A | G | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-112+25963A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14550671 | |||||||
| chrY:14551411 | T | TC | 1 | a0001c0001t0003g0026 | 1 | NA19009.hp1 | intron_variant | MODIFIER | c.-112+26704dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14551411 | ||||||
| chrY:14551847 | C | T | 1 | a0001c0001t0002g0051 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.-112+27139C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14551847 | |||||||
| chrY:14552123 | G | A | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-112+27415G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14552123 | |||||||
| chrY:14552841 | T | C | 1 | a0001c0001t0001g0006 | 1 | NA18944.hp1 | intron_variant | MODIFIER | c.-112+28133T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14552841 | |||||||
| chrY:14553130 | A | G | 3 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 |
3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.-112+28422A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14553130 | |||||||
| chrY:14553566 | C | CTG | 13 | a0001c0001t0001g0022 a0001c0001t0001g0030 a0001c0001t0001g0036 others(10): Show |
13 | HG00140.hp1 HG01069.hp1 HG01255.hp1 others(10): Show |
intron_variant | MODIFIER | c.-112+28892_-112+28 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | ||||||
| chrY:14553566 | C | CTGTGTG | 2 | a0001c0001t0001g0032 a0001c0001t0001g0035 |
2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.-112+28888_-112+28 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | ||||||
| chrY:14553566 | C | CTGTGTGT others(1): Show |
1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-112+28886_-112+28 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | ||||||
| chrY:14553566 | CTG | C | 9 | a0001c0001t0001g0020 a0001c0001t0001g0028 a0001c0001t0001g0031 others(6): Show |
9 | HG01099.hp1 HG01106.hp1 HG02071.hp1 others(6): Show |
intron_variant | MODIFIER | c.-112+28892_-112+28 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | ||||||
| chrY:14553566 | CTGTG | C | 6 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0055 others(3): Show |
6 | HG00609.hp1 HG02572.hp1 HG02735.hp1 others(3): Show |
intron_variant | MODIFIER | c.-112+28890_-112+28 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553566 | ||||||
| chrY:14553646 | ATATAT | A | 2 | a0001c0001t0001g0080 a0001c0001t0001g0081 |
2 | HG00280.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-112+28951_-112+28 others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553646 | ||||||
| chrY:14553661 | TTAA | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+28955_-112+28 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14553661 | ||||||
| chrY:14554199 | A | AT | 62 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(59): Show |
62 | HG00609.hp1 HG00621.hp1 HG00642.hp1 others(59): Show |
intron_variant | MODIFIER | c.-112+29516dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14554199 | ||||||
| chrY:14554199 | A | ATT | 8 | a0001c0001t0001g0012 a0001c0001t0001g0088 a0001c0001t0001g0093 others(5): Show |
8 | HG02717.hp1 HG03471.hp1 NA18953.hp1 others(5): Show |
intron_variant | MODIFIER | c.-112+29515_-112+29 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14554199 | ||||||
| chrY:14554199 | A | ATTTTTTT others(24): Show |
1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+29516_-112+29 others(37): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14554199 | ||||||
| chrY:14554199 | AT | A | 7 | a0001c0001t0001g0021 a0001c0001t0001g0038 a0001c0001t0001g0054 others(4): Show |
7 | HG01433.hp1 HG01515.hp1 HG01943.hp1 others(4): Show |
intron_variant | MODIFIER | c.-112+29516delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14554199 | ||||||
| chrY:14557602 | G | T | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.-112+32894G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14557602 | |||||||
| chrY:14558447 | T | A | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.-112+33739T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14558447 | |||||||
| chrY:14558653 | ACACT | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-112+33949_-112+33 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14558653 | ||||||
| chrY:14558823 | C | T | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+34115C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14558823 | |||||||
| chrY:14559132 | A | G | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.-112+34424A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14559132 | |||||||
| chrY:14559478 | C | A | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+34770C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14559478 | |||||||
| chrY:14559827 | G | A | 2 | a0001c0001t0002g0029 a0001c0001t0002g0078 |
2 | HG02056.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.-112+35119G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14559827 | |||||||
| chrY:14561004 | A | AT | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+36301dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14561004 | ||||||
| chrY:14561512 | A | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+36804A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14561512 | |||||||
| chrY:14561760 | A | G | 1 | a0001c0001t0002g0047 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.-112+37052A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14561760 | |||||||
| chrY:14562040 | G | GT | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+37335dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14562040 | ||||||
| chrY:14562330 | TC | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+37626delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14562330 | ||||||
| chrY:14562455 | C | CT | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+37749dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14562455 | ||||||
| chrY:14562680 | A | G | 7 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0030 others(4): Show |
7 | HG00140.hp1 HG01069.hp1 HG01167.hp1 others(4): Show |
intron_variant | MODIFIER | c.-112+37972A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14562680 | |||||||
| chrY:14562857 | C | T | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-112+38149C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14562857 | |||||||
| chrY:14562858 | G | A | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+38150G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14562858 | |||||||
| chrY:14563107 | A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-112+38399A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14563107 | |||||||
| chrY:14563159 | A | C | 1 | a0001c0001t0001g0055 | 1 | HG02735.hp1 | intron_variant | MODIFIER | c.-112+38451A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14563159 | |||||||
| chrY:14563498 | GT | G | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.-112+38793delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14563498 | ||||||
| chrY:14564131 | T | C | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-112+39423T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564131 | |||||||
| chrY:14564295 | AG | A | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.-112+39593delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14564295 | ||||||
| chrY:14564470 | G | C | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.-112+39762G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564470 | |||||||
| chrY:14564684 | C | T | 5 | a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 others(2): Show |
5 | HG00621.hp1 NA18945.hp1 NA19062.hp1 others(2): Show |
intron_variant | MODIFIER | c.-112+39976C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564684 | |||||||
| chrY:14564882 | C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+40174C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564882 | |||||||
| chrY:14564996 | T | A | 2 | a0001c0001t0001g0062 a0001c0001t0001g0074 |
2 | HG01928.hp1 HG01952.hp1 |
intron_variant | MODIFIER | c.-112+40288T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14564996 | |||||||
| chrY:14565073 | C | T | 1 | a0001c0001t0002g0106 | 1 | NA19066.hp1 | intron_variant | MODIFIER | c.-112+40365C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14565073 | |||||||
| chrY:14565330 | C | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-112+40622C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14565330 | |||||||
| chrY:14565445 | A | G | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-112+40737A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14565445 | |||||||
| chrY:14565727 | C | A | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.-112+41019C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14565727 | |||||||
| chrY:14565852 | T | TG | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.-112+41151dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14565852 | ||||||
| chrY:14566697 | CCCCAAAT others(96): Show |
C | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-112+42050_-112+42 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14566697 | ||||||
| chrY:14566827 | C | A | 15 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(12): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.-112+42119C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14566827 | |||||||
| chrY:14567219 | A | AT | 14 | a0001c0001t0001g0011 a0001c0001t0001g0041 a0001c0001t0001g0061 others(11): Show |
14 | HG00280.hp1 HG00738.hp1 HG01934.hp1 others(11): Show |
intron_variant | MODIFIER | c.-112+42536dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567219 | ||||||
| chrY:14567219 | A | ATT | 2 | a0001c0001t0002g0029 a0001c0001t0002g0078 |
2 | HG02056.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.-112+42535_-112+42 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567219 | ||||||
| chrY:14567219 | AT | A | 6 | a0001c0001t0001g0030 a0001c0001t0001g0115 a0001c0001t0002g0048 others(3): Show |
6 | HG00621.hp1 HG01069.hp1 NA18971.hp1 others(3): Show |
intron_variant | MODIFIER | c.-112+42536delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567219 | ||||||
| chrY:14567361 | T | A | 3 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 |
3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.-112+42653T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14567361 | |||||||
| chrY:14567524 | A | AT | 3 | a0001c0001t0001g0004 a0001c0001t0001g0032 a0001c0001t0001g0035 |
3 | HG01074.hp1 HG01109.hp1 NA19004.hp1 |
intron_variant | MODIFIER | c.-112+42834dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567524 | ||||||
| chrY:14567524 | AT | A | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.-112+42834delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567524 | ||||||
| chrY:14567710 | AT | A | 97 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(94): Show |
97 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(94): Show |
intron_variant | MODIFIER | c.-112+43009delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14567710 | ||||||
| chrY:14567982 | T | A | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.-112+43274T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14567982 | |||||||
| chrY:14568144 | C | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.-112+43436C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14568144 | |||||||
| chrY:14568167 | A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.-112+43459A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14568167 | |||||||
| chrY:14568770 | AT | A | 1 | a0001c0001t0002g0048 | 1 | NA19062.hp1 | intron_variant | MODIFIER | c.-112+44070delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14568770 | ||||||
| chrY:14568772 | T | A | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-112+44064T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14568772 | |||||||
| chrY:14569709 | A | G | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-112+45001A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14569709 | |||||||
| chrY:14569785 | G | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-112+45077G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14569785 | |||||||
| chrY:14570287 | C | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-112+45579C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14570287 | |||||||
| chrY:14570970 | G | A | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+46262G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14570970 | |||||||
| chrY:14571568 | A | G | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.-112+46860A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14571568 | |||||||
| chrY:14571917 | A | G | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47209A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14571917 | |||||||
| chrY:14572098 | C | T | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47390C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572098 | |||||||
| chrY:14572099 | A | G | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.-112+47391A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572099 | |||||||
| chrY:14572145 | A | G | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47437A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572145 | |||||||
| chrY:14572183 | C | T | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47475C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572183 | |||||||
| chrY:14572222 | G | A | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-112+47514G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572222 | |||||||
| chrY:14572742 | G | C | 3 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 |
3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.-112+48034G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572742 | |||||||
| chrY:14572953 | G | A | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-112+48245G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14572953 | |||||||
| chrY:14573284 | G | C | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-112+48576G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14573284 | |||||||
| chrY:14573682 | T | A | 1 | a0001c0001t0003g0026 | 1 | NA19009.hp1 | intron_variant | MODIFIER | c.-111-48327T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14573682 | |||||||
| chrY:14573877 | G | C | 3 | a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0091 |
3 | HG02486.hp1 HG02965.hp1 HG03139.hp1 |
intron_variant | MODIFIER | c.-111-48132G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14573877 | |||||||
| chrY:14574372 | T | A | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-111-47637T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14574372 | |||||||
| chrY:14574583 | G | T | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.-111-47426G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14574583 | |||||||
| chrY:14575085 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-46924G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14575085 | |||||||
| chrY:14575696 | G | GT | 1 | a0001c0001t0002g0101 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.-111-46306dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14575696 | ||||||
| chrY:14575993 | GC | G | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-111-46012delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14575993 | ||||||
| chrY:14576354 | G | A | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-111-45655G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14576354 | |||||||
| chrY:14576678 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-45331G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14576678 | |||||||
| chrY:14578131 | G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-111-43878G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14578131 | |||||||
| chrY:14578220 | GATA | G | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-111-43777_-111-43 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14578220 | ||||||
| chrY:14578640 | C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-43369C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14578640 | |||||||
| chrY:14578900 | C | T | 43 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(40): Show |
43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.-111-43109C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14578900 | |||||||
| chrY:14578904 | T | G | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.-111-43105T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14578904 | |||||||
| chrY:14579942 | G | T | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-111-42067G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14579942 | |||||||
| chrY:14580148 | C | T | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-111-41861C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14580148 | |||||||
| chrY:14580227 | G | GAAAAAAA others(7): Show |
18 | a0001c0001t0001g0028 a0001c0001t0001g0037 a0001c0001t0001g0038 others(15): Show |
18 | HG00621.hp1 HG01099.hp1 HG01433.hp1 others(15): Show |
intron_variant | MODIFIER | c.-111-41773_-111-41 others(20): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580227 | ||||||
| chrY:14580237 | C | CA | 1 | a0001c0001t0001g0061 | 1 | HG00738.hp1 | intron_variant | MODIFIER | c.-111-41744dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580237 | ||||||
| chrY:14580237 | C | CAAAAAAA others(8): Show |
3 | a0001c0001t0001g0031 a0001c0001t0002g0040 a0001c0001t0002g0052 |
3 | HG03710.hp1 NA19083.hp1 NA19086.hp1 |
intron_variant | MODIFIER | c.-111-41760_-111-41 others(21): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580237 | ||||||
| chrY:14580237 | CA | C | 3 | a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0075 |
3 | HG01515.hp1 HG02602.hp1 HG02738.hp1 |
intron_variant | MODIFIER | c.-111-41744delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580237 | ||||||
| chrY:14580237 | CAA | C | 6 | a0001c0001t0001g0034 a0001c0001t0001g0054 a0001c0001t0001g0056 others(3): Show |
6 | HG00642.hp1 HG03490.hp1 HG03492.hp1 others(3): Show |
intron_variant | MODIFIER | c.-111-41745_-111-41 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580237 | ||||||
| chrY:14580238 | A | AAAAAAAA others(6): Show |
57 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0019 others(54): Show |
57 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(54): Show |
intron_variant | MODIFIER | c.-111-41760_-111-41 others(19): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580238 | ||||||
| chrY:14580239 | A | AAAAAAAA others(5): Show |
25 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(22): Show |
25 | HG03017.hp1 NA18612.hp1 NA18940.hp1 others(22): Show |
intron_variant | MODIFIER | c.-111-41760_-111-41 others(18): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580239 | ||||||
| chrY:14580532 | G | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-41477G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14580532 | |||||||
| chrY:14580802 | G | T | 2 | a0001c0001t0001g0080 a0001c0001t0001g0081 |
2 | HG00280.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-111-41207G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14580802 | |||||||
| chrY:14580877 | G | GA | 27 | a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0013 others(24): Show |
27 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(24): Show |
intron_variant | MODIFIER | c.-111-41105dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | ||||||
| chrY:14580877 | G | GAA | 4 | a0001c0001t0001g0007 a0001c0001t0001g0042 a0001c0001t0001g0083 others(1): Show |
4 | HG01192.hp1 HG02145.hp1 NA18994.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-41106_-111-41 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | ||||||
| chrY:14580877 | G | GAAA | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.-111-41107_-111-41 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | ||||||
| chrY:14580877 | GA | G | 5 | a0001c0001t0001g0011 a0001c0001t0001g0030 a0001c0001t0001g0055 others(2): Show |
5 | HG01069.hp1 HG02698.hp1 HG02735.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-41105delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | ||||||
| chrY:14580877 | GAAAAAAA | G | 4 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 others(1): Show |
4 | HG01099.hp1 HG03579.hp1 HG03688.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-41111_-111-41 others(13): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | ||||||
| chrY:14580877 | GAAAAAAA others(1): Show |
G | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.-111-41112_-111-41 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14580877 | ||||||
| chrY:14581377 | C | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-40632C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14581377 | |||||||
| chrY:14582518 | T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-39491T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14582518 | |||||||
| chrY:14582721 | T | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-39288T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14582721 | |||||||
| chrY:14583229 | T | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-38780T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14583229 | |||||||
| chrY:14583872 | T | C | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-38137T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14583872 | |||||||
| chrY:14584329 | T | G | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.-111-37680T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14584329 | |||||||
| chrY:14584828 | G | A | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.-111-37181G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14584828 | |||||||
| chrY:14586287 | A | C | 1 | a0001c0001t0001g0086 | 1 | HG02895.hp1 | intron_variant | MODIFIER | c.-111-35722A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586287 | |||||||
| chrY:14586588 | C | T | 3 | a0001c0001t0001g0004 a0001c0002t0001g0003 a0001c0002t0001g0005 |
3 | NA18995.hp1 NA19004.hp1 NA19063.hp1 |
intron_variant | MODIFIER | c.-111-35421C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586588 | |||||||
| chrY:14586600 | C | T | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-111-35409C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586600 | |||||||
| chrY:14586601 | G | A | 2 | a0001c0001t0001g0023 a0001c0001t0005g0077 |
2 | HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.-111-35408G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586601 | |||||||
| chrY:14586657 | G | A | 1 | a0001c0001t0001g0015 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.-111-35352G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14586657 | |||||||
| chrY:14587955 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-34054G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14587955 | |||||||
| chrY:14588233 | C | G | 1 | a0001c0001t0001g0089 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.-111-33776C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14588233 | |||||||
| chrY:14588415 | T | C | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.-111-33594T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14588415 | |||||||
| chrY:14588745 | G | A | 2 | a0001c0001t0001g0001 a0001c0001t0001g0055 |
2 | HG02735.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.-111-33264G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14588745 | |||||||
| chrY:14588967 | T | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-111-33042T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14588967 | |||||||
| chrY:14589441 | G | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-32568G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589441 | |||||||
| chrY:14589646 | A | C | 8 | a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 others(5): Show |
8 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(5): Show |
intron_variant | MODIFIER | c.-111-32363A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589646 | |||||||
| chrY:14589738 | C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-32271C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589738 | |||||||
| chrY:14589819 | C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-111-32190C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589819 | |||||||
| chrY:14589927 | G | C | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.-111-32082G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589927 | |||||||
| chrY:14589958 | A | G | 1 | a0001c0001t0001g0030 | 1 | HG01069.hp1 | intron_variant | MODIFIER | c.-111-32051A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14589958 | |||||||
| chrY:14590025 | G | A | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-111-31984G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14590025 | |||||||
| chrY:14590089 | G | A | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-111-31920G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14590089 | |||||||
| chrY:14590138 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-31871G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14590138 | |||||||
| chrY:14590159 | T | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-31850T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14590159 | |||||||
| chrY:14591612 | T | A | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-111-30397T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14591612 | |||||||
| chrY:14592015 | G | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.-111-29994G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14592015 | |||||||
| chrY:14593036 | G | A | 2 | a0001c0001t0001g0030 a0001c0001t0001g0038 |
2 | HG01069.hp1 HG01433.hp1 |
intron_variant | MODIFIER | c.-111-28973G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593036 | |||||||
| chrY:14593398 | T | C | 1 | a0001c0001t0001g0004 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.-111-28611T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593398 | |||||||
| chrY:14593664 | A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.-111-28345A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593664 | |||||||
| chrY:14593882 | G | A | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.-111-28127G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593882 | |||||||
| chrY:14593971 | A | T | 4 | a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0002g0119 others(1): Show |
4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-28038A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14593971 | |||||||
| chrY:14594059 | CTCAGA | C | 3 | a0001c0001t0001g0004 a0001c0002t0001g0003 a0001c0002t0001g0005 |
3 | NA18995.hp1 NA19004.hp1 NA19063.hp1 |
intron_variant | MODIFIER | c.-111-27948_-111-27 others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14594059 | ||||||
| chrY:14594896 | G | A | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.-111-27113G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14594896 | |||||||
| chrY:14595180 | G | A | 1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.-111-26829G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14595180 | |||||||
| chrY:14595181 | G | T | 1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.-111-26828G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14595181 | |||||||
| chrY:14595751 | C | T | 15 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(12): Show |
15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.-111-26258C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14595751 | |||||||
| chrY:14596444 | A | C | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.-111-25565A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14596444 | |||||||
| chrY:14596494 | C | T | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-111-25515C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14596494 | |||||||
| chrY:14596618 | G | A | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-111-25391G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14596618 | |||||||
| chrY:14596811 | C | T | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.-111-25198C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14596811 | |||||||
| chrY:14597190 | C | T | 1 | a0001c0001t0003g0025 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-111-24819C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597190 | |||||||
| chrY:14597452 | C | A | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.-111-24557C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597452 | |||||||
| chrY:14597584 | C | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-24425C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597584 | |||||||
| chrY:14597629 | A | G | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-111-24380A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597629 | |||||||
| chrY:14597851 | T | C | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24158T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597851 | |||||||
| chrY:14597858 | A | G | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24151A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597858 | |||||||
| chrY:14597859 | C | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24150C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597859 | |||||||
| chrY:14597876 | G | A | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24133G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597876 | |||||||
| chrY:14597896 | T | G | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24113T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597896 | |||||||
| chrY:14597898 | C | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24111C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597898 | |||||||
| chrY:14597907 | C | A | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24102C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14597907 | |||||||
| chrY:14597910 | T | TCA | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-24098_-111-24 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14597910 | ||||||
| chrY:14598270 | G | A | 1 | a0001c0001t0002g0027 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.-111-23739G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598270 | |||||||
| chrY:14598390 | G | A | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.-111-23619G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598390 | |||||||
| chrY:14598397 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-23612G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598397 | |||||||
| chrY:14598479 | C | T | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-111-23530C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598479 | |||||||
| chrY:14598548 | C | A | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-111-23461C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598548 | |||||||
| chrY:14598713 | C | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-23296C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598713 | |||||||
| chrY:14598715 | A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-23294A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598715 | |||||||
| chrY:14598849 | AG | A | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.-111-23157delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598849 | ||||||
| chrY:14598883 | G | GTA | 48 | a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0034 others(45): Show |
48 | HG01243.hp1 HG02040.hp1 HG02055.hp1 others(45): Show |
intron_variant | MODIFIER | c.-111-23098_-111-23 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598883 | ||||||
| chrY:14598883 | G | GTATA | 4 | a0001c0001t0001g0042 a0001c0001t0001g0075 a0001c0001t0002g0033 others(1): Show |
4 | HG01192.hp1 HG02015.hp1 HG02602.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-23100_-111-23 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598883 | ||||||
| chrY:14598883 | G | GTATATA | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.-111-23102_-111-23 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598883 | ||||||
| chrY:14598883 | GTATATA | G | 3 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 |
3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.-111-23102_-111-23 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14598883 | ||||||
| chrY:14598956 | G | C | 1 | a0001c0001t0001g0038 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.-111-23053G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14598956 | |||||||
| chrY:14599229 | T | C | 1 | a0001c0001t0001g0058 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.-111-22780T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14599229 | |||||||
| chrY:14600068 | C | T | 2 | a0001c0001t0001g0007 a0001c0001t0001g0018 |
2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.-111-21941C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14600068 | |||||||
| chrY:14600082 | C | T | 2 | a0001c0001t0001g0023 a0001c0001t0005g0077 |
2 | HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.-111-21927C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14600082 | |||||||
| chrY:14600167 | C | G | 2 | a0001c0001t0001g0032 a0001c0001t0001g0035 |
2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.-111-21842C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14600167 | |||||||
| chrY:14601278 | G | GT | 3 | a0001c0001t0001g0002 a0001c0001t0001g0043 a0001c0001t0001g0068 |
3 | HG02738.hp1 HG03688.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.-111-20722dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14601278 | ||||||
| chrY:14601407 | A | G | 97 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(94): Show |
97 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(94): Show |
intron_variant | MODIFIER | c.-111-20602A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14601407 | |||||||
| chrY:14601438 | G | T | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.-111-20571G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14601438 | |||||||
| chrY:14601480 | A | G | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.-111-20529A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14601480 | |||||||
| chrY:14601571 | A | G | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-111-20438A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14601571 | |||||||
| chrY:14602805 | G | A | 2 | a0001c0001t0001g0080 a0001c0001t0001g0081 |
2 | HG00280.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-111-19204G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14602805 | |||||||
| chrY:14603154 | G | GGT | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-18836_-111-18 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14603154 | ||||||
| chrY:14603435 | G | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.-111-18574G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14603435 | |||||||
| chrY:14604239 | C | A | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.-111-17770C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14604239 | |||||||
| chrY:14604270 | G | A | 1 | a0001c0001t0001g0037 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.-111-17739G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14604270 | |||||||
| chrY:14604880 | C | G | 1 | a0001c0001t0002g0050 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.-111-17129C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14604880 | |||||||
| chrY:14605095 | T | C | 1 | a0001c0001t0001g0043 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.-111-16914T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14605095 | |||||||
| chrY:14606135 | A | G | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-111-15874A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14606135 | |||||||
| chrY:14606814 | T | C | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-15195T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14606814 | |||||||
| chrY:14606840 | T | C | 102 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(99): Show |
102 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(99): Show |
intron_variant | MODIFIER | c.-111-15169T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14606840 | |||||||
| chrY:14607013 | C | T | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.-111-14996C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14607013 | |||||||
| chrY:14607814 | C | T | 1 | a0001c0001t0003g0026 | 1 | NA19009.hp1 | intron_variant | MODIFIER | c.-111-14195C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14607814 | |||||||
| chrY:14607992 | G | A | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.-111-14017G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14607992 | |||||||
| chrY:14608133 | T | C | 118 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(115): Show |
118 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(115): Show |
intron_variant | MODIFIER | c.-111-13876T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14608133 | |||||||
| chrY:14609476 | T | G | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-111-12533T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14609476 | |||||||
| chrY:14609760 | A | G | 1 | a0001c0001t0001g0081 | 1 | NA18747.hp1 | intron_variant | MODIFIER | c.-111-12249A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14609760 | |||||||
| chrY:14611389 | TTC | T | 2 | a0001c0001t0001g0092 a0001c0001t0001g0111 |
2 | HG03130.hp1 NA18612.hp1 |
intron_variant | MODIFIER | c.-111-10618_-111-10 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611389 | ||||||
| chrY:14611390 | TC | T | 40 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(37): Show |
40 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(37): Show |
intron_variant | MODIFIER | c.-111-10618delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14611390 | |||||||
| chrY:14611391 | C | CT | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.-111-10605dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611391 | ||||||
| chrY:14611391 | C | T | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.-111-10618C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14611391 | |||||||
| chrY:14611391 | CT | C | 3 | a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0081 |
3 | HG03688.hp1 HG04199.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.-111-10605delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611391 | ||||||
| chrY:14611443 | C | T | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.-111-10566C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14611443 | |||||||
| chrY:14611541 | C | CTGTT | 4 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0002g0024 others(1): Show |
4 | HG02074.hp1 NA18612.hp1 NA19079.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-10454_-111-10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611541 | ||||||
| chrY:14611555 | G | GTTTA | 5 | a0001c0001t0001g0031 a0001c0001t0001g0036 a0001c0001t0001g0115 others(2): Show |
5 | HG00140.hp1 HG02071.hp1 HG03710.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-10418_-111-10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611555 | ||||||
| chrY:14611555 | GTTTA | G | 14 | a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0056 others(11): Show |
14 | HG00642.hp1 HG01167.hp1 HG01928.hp1 others(11): Show |
intron_variant | MODIFIER | c.-111-10418_-111-10 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14611555 | ||||||
| chrY:14611559 | A | G | 1 | a0001c0001t0002g0104 | 1 | NA18990.hp1 | intron_variant | MODIFIER | c.-111-10450A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14611559 | |||||||
| chrY:14612221 | A | G | 5 | a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 others(2): Show |
5 | HG00621.hp1 NA18945.hp1 NA19062.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-9788A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14612221 | |||||||
| chrY:14612368 | G | A | 16 | a0001c0001t0002g0027 a0001c0001t0002g0029 a0001c0001t0002g0040 others(13): Show |
16 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(13): Show |
intron_variant | MODIFIER | c.-111-9641G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14612368 | |||||||
| chrY:14612376 | T | C | 1 | a0001c0001t0001g0035 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.-111-9633T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14612376 | |||||||
| chrY:14613282 | C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-111-8727C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14613282 | |||||||
| chrY:14613653 | T | G | 1 | a0001c0001t0002g0029 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.-111-8356T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14613653 | |||||||
| chrY:14614401 | G | A | 5 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-7608G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14614401 | |||||||
| chrY:14614737 | A | G | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-111-7272A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14614737 | |||||||
| chrY:14614957 | G | T | 102 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(99): Show |
102 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(99): Show |
intron_variant | MODIFIER | c.-111-7052G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14614957 | |||||||
| chrY:14615001 | G | A | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.-111-7008G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14615001 | |||||||
| chrY:14615218 | C | T | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.-111-6791C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14615218 | |||||||
| chrY:14615694 | A | G | 1 | a0001c0001t0003g0025 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-111-6315A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14615694 | |||||||
| chrY:14616081 | CT | C | 1 | a0001c0001t0001g0109 | 1 | NA19091.hp1 | intron_variant | MODIFIER | c.-111-5921delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14616081 | ||||||
| chrY:14616088 | TG | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-111-5919delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14616088 | ||||||
| chrY:14616328 | TTC | T | 5 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-5675_-111-567 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14616328 | ||||||
| chrY:14616981 | G | A | 1 | a0001c0001t0002g0097 | 1 | NA19007.hp1 | intron_variant | MODIFIER | c.-111-5028G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14616981 | |||||||
| chrY:14617159 | GC | G | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-111-4849delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14617159 | |||||||
| chrY:14617274 | TTTC | T | 5 | a0001c0001t0001g0030 a0001c0001t0001g0038 a0001c0001t0001g0063 others(2): Show |
5 | HG01069.hp1 HG01255.hp1 HG01256.hp1 others(2): Show |
intron_variant | MODIFIER | c.-111-4723_-111-472 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14617274 | ||||||
| chrY:14617292 | G | GT | 24 | a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0013 others(21): Show |
24 | HG00280.hp1 HG01099.hp1 HG01192.hp1 others(21): Show |
intron_variant | MODIFIER | c.-111-4695dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14617292 | ||||||
| chrY:14617292 | G | GTT | 1 | a0001c0001t0001g0037 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.-111-4696_-111-469 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14617292 | ||||||
| chrY:14617292 | GT | G | 7 | a0001c0001t0001g0030 a0001c0001t0001g0038 a0001c0001t0001g0061 others(4): Show |
7 | HG00738.hp1 HG01069.hp1 HG01167.hp1 others(4): Show |
intron_variant | MODIFIER | c.-111-4695delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14617292 | ||||||
| chrY:14618098 | G | T | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.-111-3911G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14618098 | |||||||
| chrY:14618123 | G | GA | 3 | a0001c0001t0001g0018 a0001c0001t0002g0029 a0001c0001t0002g0078 |
3 | HG02056.hp1 NA18940.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.-111-3869dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14618123 | ||||||
| chrY:14618123 | G | GAA | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-111-3870_-111-386 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14618123 | ||||||
| chrY:14618123 | GA | G | 1 | a0001c0001t0002g0100 | 1 | NA18965.hp1 | intron_variant | MODIFIER | c.-111-3869delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14618123 | ||||||
| chrY:14619785 | C | T | 43 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(40): Show |
43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.-111-2224C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14619785 | |||||||
| chrY:14620424 | AT | A | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.-111-1582delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14620424 | ||||||
| chrY:14620886 | C | CT | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.-111-1122dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14620886 | ||||||
| chrY:14620957 | AC | A | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.-111-1049delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14620957 | ||||||
| chrY:14621081 | G | GT | 4 | a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0002g0119 others(1): Show |
4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.-111-914dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14621081 | ||||||
| chrY:14621081 | GT | G | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.-111-914delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chrY | 14621081 | ||||||
| chrY:14621173 | G | A | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-111-836G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621173 | |||||||
| chrY:14621323 | A | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.-111-686A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621323 | |||||||
| chrY:14621697 | G | A | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.-111-312G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621697 | |||||||
| chrY:14621836 | C | A | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.-111-173C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621836 | |||||||
| chrY:14621876 | A | C | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.-111-133A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621876 | |||||||
| chrY:14621906 | A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.-111-103A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 1/6 | chrY | 14621906 | |||||||
| chrY:14623582 | G | T | 4 | a0001c0001t0001g0022 a0001c0001t0001g0062 a0001c0001t0001g0074 others(1): Show |
4 | HG01928.hp1 HG01952.hp1 HG02132.hp1 others(1): Show |
intron_variant | MODIFIER | c.472+991G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14623582 | |||||||
| chrY:14624588 | G | A | 1 | a0001c0001t0002g0107 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.472+1997G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14624588 | |||||||
| chrY:14624747 | C | T | 1 | a0001c0001t0002g0104 | 1 | NA18990.hp1 | intron_variant | MODIFIER | c.472+2156C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14624747 | |||||||
| chrY:14624936 | C | G | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.472+2345C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14624936 | |||||||
| chrY:14625456 | G | T | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.472+2865G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14625456 | |||||||
| chrY:14625512 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+2921G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14625512 | |||||||
| chrY:14625867 | A | C | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.472+3276A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14625867 | |||||||
| chrY:14626156 | C | T | 1 | a0001c0001t0001g0034 | 1 | HG04204.hp1 | intron_variant | MODIFIER | c.472+3565C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14626156 | |||||||
| chrY:14626691 | TGCTGATT others(17): Show |
T | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.472+4118_472+4141d others(26): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14626691 | ||||||
| chrY:14626714 | G | T | 3 | a0001c0001t0002g0045 a0001c0001t0002g0119 a0001c0001t0002g0120 |
3 | HG02071.hp1 HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.472+4123G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14626714 | |||||||
| chrY:14626854 | C | G | 1 | a0001c0001t0001g0028 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.472+4263C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14626854 | |||||||
| chrY:14627189 | G | GA | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.472+4615dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14627189 | ||||||
| chrY:14627189 | GA | G | 1 | a0001c0001t0002g0100 | 1 | NA18965.hp1 | intron_variant | MODIFIER | c.472+4615delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14627189 | ||||||
| chrY:14627358 | G | A | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.472+4767G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14627358 | |||||||
| chrY:14627795 | C | T | 2 | a0001c0001t0001g0001 a0001c0001t0001g0055 |
2 | HG02735.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.472+5204C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14627795 | |||||||
| chrY:14628358 | G | A | 1 | a0001c0001t0002g0046 | 1 | HG00609.hp1 | intron_variant | MODIFIER | c.472+5767G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14628358 | |||||||
| chrY:14629037 | T | G | 1 | a0001c0001t0001g0043 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.472+6446T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14629037 | |||||||
| chrY:14629102 | T | A | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.472+6511T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14629102 | |||||||
| chrY:14629576 | C | A | 1 | a0001c0001t0001g0006 | 1 | NA18944.hp1 | intron_variant | MODIFIER | c.472+6985C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14629576 | |||||||
| chrY:14630344 | G | A | 103 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(100): Show |
103 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(100): Show |
intron_variant | MODIFIER | c.472+7753G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14630344 | |||||||
| chrY:14630912 | A | C | 1 | a0001c0001t0001g0076 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.472+8321A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14630912 | |||||||
| chrY:14631111 | G | C | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.472+8520G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14631111 | |||||||
| chrY:14631209 | G | T | 1 | a0001c0001t0002g0099 | 1 | NA19070.hp1 | intron_variant | MODIFIER | c.472+8618G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14631209 | |||||||
| chrY:14631414 | T | C | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.472+8823T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14631414 | |||||||
| chrY:14632629 | G | A | 2 | a0001c0001t0001g0032 a0001c0001t0001g0035 |
2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.472+10038G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14632629 | |||||||
| chrY:14635562 | T | TTTTA | 14 | a0001c0001t0001g0002 a0001c0001t0001g0032 a0001c0001t0001g0034 others(11): Show |
14 | HG00140.hp1 HG01074.hp1 HG01109.hp1 others(11): Show |
intron_variant | MODIFIER | c.472+13011_472+1301 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14635562 | ||||||
| chrY:14635562 | T | TTTTATTT others(1): Show |
1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.472+13007_472+1301 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14635562 | ||||||
| chrY:14635562 | TTTTA | T | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.472+13011_472+1301 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14635562 | ||||||
| chrY:14635847 | C | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.472+13256C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14635847 | |||||||
| chrY:14636115 | T | G | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.472+13524T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14636115 | |||||||
| chrY:14636446 | C | A | 2 | a0001c0001t0002g0046 a0001c0001t0002g0047 |
2 | HG00609.hp1 NA18982.hp1 |
intron_variant | MODIFIER | c.472+13855C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14636446 | |||||||
| chrY:14636755 | G | T | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.472+14164G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14636755 | |||||||
| chrY:14637187 | G | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.472+14596G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637187 | |||||||
| chrY:14637845 | G | GT | 5 | a0001c0001t0001g0018 a0001c0001t0001g0031 a0001c0001t0001g0076 others(2): Show |
5 | HG02056.hp1 HG02717.hp1 HG03710.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+15270dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637845 | ||||||
| chrY:14637845 | GT | G | 3 | a0001c0001t0001g0023 a0001c0001t0001g0043 a0001c0001t0004g0114 |
3 | HG02647.hp1 HG03688.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+15270delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637845 | ||||||
| chrY:14637845 | GTT | G | 2 | a0001c0001t0001g0081 a0001c0001t0005g0077 |
2 | HG03225.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.472+15269_472+1527 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637845 | ||||||
| chrY:14637858 | T | G | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.472+15267T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637858 | |||||||
| chrY:14637858 | T | TTG | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.472+15268_472+1526 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637858 | ||||||
| chrY:14637860 | T | G | 10 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0030 others(7): Show |
10 | HG01069.hp1 HG01256.hp1 HG01258.hp1 others(7): Show |
intron_variant | MODIFIER | c.472+15269T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637860 | |||||||
| chrY:14637860 | T | TG | 1 | a0001c0001t0001g0065 | 1 | HG01255.hp1 | intron_variant | MODIFIER | c.472+15269_472+1527 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637860 | |||||||
| chrY:14637860 | T | TTG | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.472+15292_472+1529 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14637860 | ||||||
| chrY:14637862 | G | T | 8 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 others(5): Show |
8 | HG00609.hp1 HG01099.hp1 HG02015.hp1 others(5): Show |
intron_variant | MODIFIER | c.472+15271G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14637862 | |||||||
| chrY:14638447 | T | A | 1 | a0001c0001t0002g0051 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.472+15856T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14638447 | |||||||
| chrY:14638975 | G | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+16384G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14638975 | |||||||
| chrY:14639115 | C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+16524C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639115 | |||||||
| chrY:14639120 | C | T | 2 | a0001c0001t0001g0036 a0001c0001t0001g0112 |
2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.472+16529C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639120 | |||||||
| chrY:14639121 | G | A | 16 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(13): Show |
16 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(13): Show |
intron_variant | MODIFIER | c.472+16530G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639121 | |||||||
| chrY:14639624 | G | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+17033G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639624 | |||||||
| chrY:14639847 | A | G | 5 | a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 others(2): Show |
5 | HG00621.hp1 NA18945.hp1 NA19062.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+17256A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639847 | |||||||
| chrY:14639945 | A | G | 112 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(109): Show |
112 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(109): Show |
intron_variant | MODIFIER | c.472+17354A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14639945 | |||||||
| chrY:14640468 | G | T | 1 | a0001c0001t0001g0028 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.472+17877G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14640468 | |||||||
| chrY:14641317 | A | G | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.472+18726A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14641317 | |||||||
| chrY:14641970 | G | A | 2 | a0001c0001t0001g0084 a0001c0001t0001g0091 |
2 | HG02486.hp1 HG02965.hp1 |
intron_variant | MODIFIER | c.472+19379G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14641970 | |||||||
| chrY:14643360 | A | G | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.472+20769A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14643360 | |||||||
| chrY:14643383 | A | G | 1 | a0001c0001t0002g0047 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.472+20792A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14643383 | |||||||
| chrY:14644890 | A | G | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.472+22299A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14644890 | |||||||
| chrY:14645163 | A | AT | 28 | a0001c0001t0001g0019 a0001c0001t0001g0031 a0001c0001t0001g0032 others(25): Show |
28 | HG00140.hp1 HG01074.hp1 HG01106.hp1 others(25): Show |
intron_variant | MODIFIER | c.472+22599dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14645163 | ||||||
| chrY:14645163 | A | ATT | 4 | a0001c0001t0001g0035 a0001c0001t0001g0083 a0001c0001t0001g0085 others(1): Show |
4 | HG01109.hp1 HG02145.hp1 HG03098.hp1 others(1): Show |
intron_variant | MODIFIER | c.472+22598_472+2259 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14645163 | ||||||
| chrY:14645163 | A | ATTTTTT | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+22594_472+2259 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14645163 | ||||||
| chrY:14645163 | AT | A | 2 | a0001c0001t0001g0023 a0001c0001t0001g0080 |
2 | HG00280.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+22599delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14645163 | ||||||
| chrY:14645207 | C | T | 15 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(12): Show |
15 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(12): Show |
intron_variant | MODIFIER | c.472+22616C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14645207 | |||||||
| chrY:14645216 | A | C | 1 | a0001c0001t0001g0093 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.472+22625A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14645216 | |||||||
| chrY:14646020 | C | T | 5 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+23429C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14646020 | |||||||
| chrY:14646318 | C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+23727C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14646318 | |||||||
| chrY:14647500 | T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+24909T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14647500 | |||||||
| chrY:14647652 | CA | C | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.472+25066delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14647652 | ||||||
| chrY:14648215 | G | A | 1 | a0001c0001t0001g0088 | 1 | HG02717.hp1 | intron_variant | MODIFIER | c.472+25624G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14648215 | |||||||
| chrY:14648357 | G | A | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.472+25766G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14648357 | |||||||
| chrY:14649004 | C | CA | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.472+26429dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14649004 | ||||||
| chrY:14649004 | CA | C | 2 | a0001c0001t0001g0023 a0001c0001t0002g0029 |
2 | NA18959.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+26429delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14649004 | ||||||
| chrY:14649031 | C | A | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.472+26440C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14649031 | |||||||
| chrY:14649037 | C | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+26446C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14649037 | |||||||
| chrY:14649625 | A | T | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.472+27034A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14649625 | |||||||
| chrY:14650571 | C | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+27980C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14650571 | |||||||
| chrY:14652775 | T | C | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.472+30184T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14652775 | |||||||
| chrY:14653040 | G | GTA | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.472+30461_472+3046 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14653040 | ||||||
| chrY:14653251 | C | CGT | 17 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(14): Show |
17 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(14): Show |
intron_variant | MODIFIER | c.472+30673_472+3067 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14653251 | ||||||
| chrY:14653264 | G | GTA | 1 | a0001c0001t0002g0050 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.472+30685_472+3068 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14653264 | ||||||
| chrY:14653536 | T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+30945T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14653536 | |||||||
| chrY:14653751 | C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+31160C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14653751 | |||||||
| chrY:14654511 | CT | C | 1 | a0001c0001t0002g0103 | 1 | NA19088.hp1 | intron_variant | MODIFIER | c.472+31931delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14654511 | ||||||
| chrY:14654587 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+31996G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14654587 | |||||||
| chrY:14654618 | A | AT | 5 | a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0016 others(2): Show |
5 | NA18940.hp1 NA18952.hp1 NA18961.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+32035dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14654618 | ||||||
| chrY:14655111 | A | AC | 3 | a0001c0001t0001g0013 a0001c0001t0001g0035 a0001c0001t0002g0027 |
3 | HG00673.hp1 HG01109.hp1 NA18967.hp1 |
intron_variant | MODIFIER | c.472+32524dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14655111 | ||||||
| chrY:14655273 | C | CT | 2 | a0001c0001t0001g0037 a0001c0001t0001g0058 |
2 | HG01943.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.472+32699dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14655273 | ||||||
| chrY:14655273 | CT | C | 3 | a0001c0001t0001g0018 a0001c0001t0001g0028 a0001c0001t0002g0033 |
3 | HG01099.hp1 HG02015.hp1 NA18940.hp1 |
intron_variant | MODIFIER | c.472+32699delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14655273 | ||||||
| chrY:14655508 | G | A | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.472+32917G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14655508 | |||||||
| chrY:14656624 | A | C | 28 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0015 others(25): Show |
28 | HG01069.hp1 HG01099.hp1 HG01192.hp1 others(25): Show |
intron_variant | MODIFIER | c.472+34033A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14656624 | |||||||
| chrY:14656671 | G | C | 1 | a0001c0001t0001g0015 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.472+34080G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14656671 | |||||||
| chrY:14656721 | C | CT | 3 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 |
3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.472+34147dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14656721 | ||||||
| chrY:14656721 | CT | C | 16 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0083 others(13): Show |
16 | HG01099.hp1 HG01167.hp1 HG02015.hp1 others(13): Show |
intron_variant | MODIFIER | c.472+34147delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14656721 | ||||||
| chrY:14656955 | C | T | 5 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+34364C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14656955 | |||||||
| chrY:14656971 | T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+34380T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14656971 | |||||||
| chrY:14657049 | T | C | 43 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(40): Show |
43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.472+34458T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14657049 | |||||||
| chrY:14657702 | G | A | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.472+35111G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14657702 | |||||||
| chrY:14657721 | C | CT | 97 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(94): Show |
97 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(94): Show |
intron_variant | MODIFIER | c.472+35130_472+3513 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14657721 | |||||||
| chrY:14658066 | G | A | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.472+35475G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14658066 | |||||||
| chrY:14658283 | A | T | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.472+35692A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14658283 | |||||||
| chrY:14658327 | A | G | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+35736A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14658327 | |||||||
| chrY:14660263 | G | T | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.472+37672G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14660263 | |||||||
| chrY:14660555 | A | AT | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.472+37981dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14660555 | ||||||
| chrY:14661990 | G | A | 110 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(107): Show |
110 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(107): Show |
intron_variant | MODIFIER | c.472+39399G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14661990 | |||||||
| chrY:14662230 | G | GTC | 43 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(40): Show |
43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.472+39641_472+3964 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14662230 | ||||||
| chrY:14662345 | TTATC | T | 4 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 others(1): Show |
4 | HG01255.hp1 HG01256.hp1 HG01258.hp1 others(1): Show |
intron_variant | MODIFIER | c.472+39774_472+3977 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14662345 | ||||||
| chrY:14662717 | G | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+40126G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14662717 | |||||||
| chrY:14663127 | C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.472+40536C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14663127 | |||||||
| chrY:14663454 | A | G | 1 | a0001c0001t0002g0098 | 1 | NA19005.hp1 | intron_variant | MODIFIER | c.472+40863A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14663454 | |||||||
| chrY:14663851 | G | GT | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.472+41266dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14663851 | ||||||
| chrY:14664708 | T | C | 1 | a0001c0001t0002g0050 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.472+42117T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14664708 | |||||||
| chrY:14665025 | A | AT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+42438dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665025 | ||||||
| chrY:14665131 | T | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.472+42540T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14665131 | |||||||
| chrY:14665246 | A | AT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+42658dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665246 | ||||||
| chrY:14665455 | C | T | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.472+42864C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14665455 | |||||||
| chrY:14665534 | A | AT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+42946dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665534 | ||||||
| chrY:14665730 | AG | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43142delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665730 | ||||||
| chrY:14665754 | TG | T | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43165delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665754 | ||||||
| chrY:14665767 | AG | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43180delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14665767 | ||||||
| chrY:14666078 | T | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43487T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14666078 | |||||||
| chrY:14666305 | TG | T | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43717delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14666305 | ||||||
| chrY:14666314 | G | A | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.472+43723G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14666314 | |||||||
| chrY:14666431 | AT | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43843delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14666431 | ||||||
| chrY:14666548 | GC | G | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43959delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14666548 | ||||||
| chrY:14666569 | AT | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+43985delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14666569 | ||||||
| chrY:14667127 | G | GA | 101 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(98): Show |
101 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(98): Show |
intron_variant | MODIFIER | c.472+44546dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14667127 | ||||||
| chrY:14667317 | TA | T | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+44729delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14667317 | ||||||
| chrY:14667415 | A | AC | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+44829dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14667415 | ||||||
| chrY:14667415 | A | C | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.472+44824A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14667415 | |||||||
| chrY:14667421 | A | C | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.472+44830A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14667421 | |||||||
| chrY:14668060 | C | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.472+45469C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668060 | |||||||
| chrY:14668103 | T | TG | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+45514dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14668103 | ||||||
| chrY:14668219 | T | TG | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+45630dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14668219 | ||||||
| chrY:14668335 | C | CT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+45748dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14668335 | ||||||
| chrY:14668349 | C | G | 1 | a0001c0001t0001g0067 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.472+45758C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668349 | |||||||
| chrY:14668402 | AT | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+45814delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14668402 | ||||||
| chrY:14668768 | C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.472+46177C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668768 | |||||||
| chrY:14668868 | C | G | 2 | a0001c0001t0001g0036 a0001c0001t0001g0112 |
2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.472+46277C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668868 | |||||||
| chrY:14668881 | A | AC | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+46290_472+4629 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668881 | |||||||
| chrY:14668929 | G | A | 5 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.472+46338G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668929 | |||||||
| chrY:14668960 | T | C | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.472+46369T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14668960 | |||||||
| chrY:14669047 | TA | T | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+46459delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14669047 | ||||||
| chrY:14669338 | AT | A | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+46751delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14669338 | ||||||
| chrY:14669440 | CT | C | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.472+46855delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14669440 | ||||||
| chrY:14669532 | A | T | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.472+46941A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14669532 | |||||||
| chrY:14669890 | A | C | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.472+47299A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14669890 | |||||||
| chrY:14671040 | C | T | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.473-48419C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14671040 | |||||||
| chrY:14671289 | G | A | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.473-48170G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14671289 | |||||||
| chrY:14671532 | T | TA | 12 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(9): Show |
12 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(9): Show |
intron_variant | MODIFIER | c.473-47914dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671532 | ||||||
| chrY:14671532 | T | TAA | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.473-47915_473-4791 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671532 | ||||||
| chrY:14671532 | TA | T | 1 | a0001c0001t0001g0030 | 1 | HG01069.hp1 | intron_variant | MODIFIER | c.473-47914delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671532 | ||||||
| chrY:14671846 | C | CA | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.473-47604dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671846 | ||||||
| chrY:14671913 | G | GT | 37 | a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0002g0024 others(34): Show |
37 | HG00280.hp1 HG00609.hp1 HG00621.hp1 others(34): Show |
intron_variant | MODIFIER | c.473-47544dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14671913 | ||||||
| chrY:14672492 | G | A | 1 | a0001c0001t0001g0111 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.473-46967G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14672492 | |||||||
| chrY:14672524 | C | CA | 4 | a0001c0001t0002g0048 a0001c0001t0002g0102 a0001c0001t0003g0025 others(1): Show |
4 | HG02083.hp1 NA19000.hp1 NA19009.hp1 others(1): Show |
intron_variant | MODIFIER | c.473-46917dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14672524 | ||||||
| chrY:14672524 | CA | C | 2 | a0001c0001t0002g0033 a0001c0001t0002g0096 |
2 | HG02015.hp1 NA18977.hp1 |
intron_variant | MODIFIER | c.473-46917delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14672524 | ||||||
| chrY:14672848 | C | CAG | 103 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(100): Show |
103 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(100): Show |
intron_variant | MODIFIER | c.473-46610_473-4660 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14672848 | ||||||
| chrY:14673114 | G | A | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.473-46345G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673114 | |||||||
| chrY:14673283 | A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.473-46176A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673283 | |||||||
| chrY:14673315 | C | T | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.473-46144C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673315 | |||||||
| chrY:14673354 | A | G | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.473-46105A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673354 | |||||||
| chrY:14673730 | G | A | 1 | a0001c0001t0001g0014 | 1 | NA19058.hp1 | intron_variant | MODIFIER | c.473-45729G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673730 | |||||||
| chrY:14673824 | A | G | 1 | a0001c0001t0001g0059 | 1 | NA20752.hp1 | intron_variant | MODIFIER | c.473-45635A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14673824 | |||||||
| chrY:14674040 | T | TG | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.473-45413dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14674040 | ||||||
| chrY:14674064 | T | C | 2 | a0001c0001t0001g0036 a0001c0001t0001g0112 |
2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.473-45395T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14674064 | |||||||
| chrY:14674333 | C | CT | 13 | a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0023 others(10): Show |
13 | HG01106.hp1 HG01109.hp1 HG01928.hp1 others(10): Show |
intron_variant | MODIFIER | c.473-45104dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14674333 | ||||||
| chrY:14674333 | CTTTTTTT | C | 1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.473-45110_473-4510 others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14674333 | ||||||
| chrY:14674501 | G | T | 1 | a0001c0001t0002g0052 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.473-44958G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14674501 | |||||||
| chrY:14675094 | C | G | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.473-44365C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14675094 | |||||||
| chrY:14675212 | A | T | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.473-44247A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14675212 | |||||||
| chrY:14676574 | G | A | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.473-42885G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14676574 | |||||||
| chrY:14676869 | CTT | C | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.473-42587_473-4258 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14676869 | ||||||
| chrY:14676900 | G | A | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.473-42559G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14676900 | |||||||
| chrY:14677407 | T | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.473-42052T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14677407 | |||||||
| chrY:14677440 | C | A | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.473-42019C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14677440 | |||||||
| chrY:14677674 | G | T | 1 | a0001c0001t0002g0100 | 1 | NA18965.hp1 | intron_variant | MODIFIER | c.473-41785G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14677674 | |||||||
| chrY:14678049 | A | G | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.473-41410A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678049 | |||||||
| chrY:14678061 | T | G | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.473-41398T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678061 | |||||||
| chrY:14678373 | C | T | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.473-41086C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678373 | |||||||
| chrY:14678750 | C | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.473-40709C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678750 | |||||||
| chrY:14678923 | G | A | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.473-40536G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14678923 | |||||||
| chrY:14679919 | T | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.473-39540T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14679919 | |||||||
| chrY:14680394 | G | A | 1 | a0001c0001t0001g0074 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.473-39065G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14680394 | |||||||
| chrY:14681850 | G | A | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.473-37609G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14681850 | |||||||
| chrY:14681891 | G | A | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.473-37568G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14681891 | |||||||
| chrY:14682105 | G | A | 1 | a0001c0001t0001g0086 | 1 | HG02895.hp1 | intron_variant | MODIFIER | c.473-37354G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14682105 | |||||||
| chrY:14684102 | G | A | 1 | a0001c0001t0002g0027 | 1 | HG00673.hp1 | intron_variant | MODIFIER | c.473-35357G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684102 | |||||||
| chrY:14684105 | C | A | 3 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 |
3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.473-35354C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684105 | |||||||
| chrY:14684110 | C | G | 3 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 |
3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.473-35349C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684110 | |||||||
| chrY:14684441 | A | G | 1 | a0001c0001t0001g0059 | 1 | NA20752.hp1 | intron_variant | MODIFIER | c.473-35018A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684441 | |||||||
| chrY:14684495 | C | G | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.473-34964C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684495 | |||||||
| chrY:14684792 | C | T | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.473-34667C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14684792 | |||||||
| chrY:14685333 | A | T | 1 | a0001c0001t0001g0088 | 1 | HG02717.hp1 | intron_variant | MODIFIER | c.473-34126A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14685333 | |||||||
| chrY:14686632 | G | T | 2 | a0001c0002t0001g0003 a0001c0002t0001g0005 |
2 | NA18995.hp1 NA19063.hp1 |
intron_variant | MODIFIER | c.473-32827G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14686632 | |||||||
| chrY:14687450 | A | G | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.473-32009A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14687450 | |||||||
| chrY:14687623 | C | A | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.473-31836C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14687623 | |||||||
| chrY:14688401 | A | G | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.473-31058A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14688401 | |||||||
| chrY:14688775 | G | T | 1 | a0001c0001t0001g0015 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.473-30684G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14688775 | |||||||
| chrY:14689472 | G | C | 4 | a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0002g0119 others(1): Show |
4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.473-29987G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14689472 | |||||||
| chrY:14690301 | A | G | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.473-29158A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14690301 | |||||||
| chrY:14690512 | A | C | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.473-28947A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14690512 | |||||||
| chrY:14690626 | G | T | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-28833G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14690626 | |||||||
| chrY:14691369 | A | C | 8 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0030 others(5): Show |
8 | HG01069.hp1 HG01255.hp1 HG01256.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-28090A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14691369 | |||||||
| chrY:14691404 | GA | G | 1 | a0001c0001t0001g0043 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.473-28053delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14691404 | ||||||
| chrY:14691688 | A | AAAT | 1 | a0001c0001t0001g0018 | 1 | NA18940.hp1 | intron_variant | MODIFIER | c.473-27771_473-2777 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14691688 | |||||||
| chrY:14692607 | C | T | 1 | a0001c0001t0001g0093 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.473-26852C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14692607 | |||||||
| chrY:14693912 | T | TA | 1 | a0001c0001t0001g0061 | 1 | HG00738.hp1 | intron_variant | MODIFIER | c.473-25533dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14693912 | ||||||
| chrY:14693912 | TA | T | 2 | a0001c0001t0002g0033 a0001c0001t0002g0106 |
2 | HG02015.hp1 NA19066.hp1 |
intron_variant | MODIFIER | c.473-25533delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14693912 | ||||||
| chrY:14694090 | AT | A | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.473-25366delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14694090 | ||||||
| chrY:14694318 | A | C | 15 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(12): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.473-25141A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14694318 | |||||||
| chrY:14696889 | C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.473-22570C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14696889 | |||||||
| chrY:14696979 | A | G | 3 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 |
3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.473-22480A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14696979 | |||||||
| chrY:14697206 | C | CAGAT | 41 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(38): Show |
41 | HG00140.hp1 HG00673.hp1 HG01099.hp1 others(38): Show |
intron_variant | MODIFIER | c.473-22212_473-2220 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697206 | ||||||
| chrY:14697206 | C | CAGATAGA others(1): Show |
7 | a0001c0001t0001g0023 a0001c0001t0002g0033 a0001c0001t0002g0044 others(4): Show |
7 | HG00621.hp1 HG02015.hp1 HG02083.hp1 others(4): Show |
intron_variant | MODIFIER | c.473-22216_473-2220 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697206 | ||||||
| chrY:14697206 | CAGAT | C | 7 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0081 others(4): Show |
7 | HG01074.hp1 HG01109.hp1 HG02027.hp1 others(4): Show |
intron_variant | MODIFIER | c.473-22212_473-2220 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697206 | ||||||
| chrY:14697343 | AAGAT | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.473-22095_473-2209 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697343 | ||||||
| chrY:14697492 | T | TGATA | 6 | a0001c0001t0001g0007 a0001c0001t0001g0018 a0001c0001t0001g0019 others(3): Show |
6 | HG01106.hp1 HG04228.hp1 NA18940.hp1 others(3): Show |
intron_variant | MODIFIER | c.473-21924_473-2192 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | ||||||
| chrY:14697492 | T | TGATAGAT others(1): Show |
1 | a0001c0001t0001g0015 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.473-21928_473-2192 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | ||||||
| chrY:14697492 | TGATA | T | 43 | a0001c0001t0001g0002 a0001c0001t0001g0023 a0001c0001t0001g0028 others(40): Show |
43 | HG00642.hp1 HG00738.hp1 HG01069.hp1 others(40): Show |
intron_variant | MODIFIER | c.473-21924_473-2192 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | ||||||
| chrY:14697492 | TGATAGAT others(1): Show |
T | 3 | a0001c0001t0001g0032 a0001c0001t0002g0097 a0001c0001t0002g0099 |
3 | HG01074.hp1 NA19007.hp1 NA19070.hp1 |
intron_variant | MODIFIER | c.473-21928_473-2192 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | ||||||
| chrY:14697492 | TGATAGAT others(5): Show |
T | 13 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(10): Show |
13 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(10): Show |
intron_variant | MODIFIER | c.473-21932_473-2192 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697492 | ||||||
| chrY:14697589 | T | TGAGA | 2 | a0001c0001t0001g0089 a0001c0001t0001g0092 |
2 | HG03130.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.473-21865_473-2186 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697589 | ||||||
| chrY:14697590 | G | GAGAT | 7 | a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 others(4): Show |
7 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(4): Show |
intron_variant | MODIFIER | c.473-21866_473-2186 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697590 | ||||||
| chrY:14697594 | G | GAGAGAGA others(1): Show |
7 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(4): Show |
7 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(4): Show |
intron_variant | MODIFIER | c.473-21862_473-2186 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | ||||||
| chrY:14697594 | G | GAGAGAGA others(5): Show |
2 | a0001c0001t0001g0091 a0001c0001t0001g0093 |
2 | HG02486.hp1 HG03471.hp1 |
intron_variant | MODIFIER | c.473-21862_473-2186 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | ||||||
| chrY:14697594 | G | GAGAGAGA others(9): Show |
1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.473-21862_473-2186 others(20): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | ||||||
| chrY:14697594 | G | GAGAT | 36 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0015 others(33): Show |
36 | HG00140.hp1 HG00280.hp1 HG00642.hp1 others(33): Show |
intron_variant | MODIFIER | c.473-21826_473-2182 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | ||||||
| chrY:14697594 | G | GAGATAGA others(1): Show |
29 | a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0021 others(26): Show |
29 | HG00609.hp1 HG00621.hp1 HG01099.hp1 others(26): Show |
intron_variant | MODIFIER | c.473-21830_473-2182 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | ||||||
| chrY:14697594 | G | GAGATAGA others(5): Show |
10 | a0001c0001t0002g0078 a0001c0001t0002g0095 a0001c0001t0002g0100 others(7): Show |
10 | HG02056.hp1 HG02129.hp1 HG02135.hp1 others(7): Show |
intron_variant | MODIFIER | c.473-21834_473-2182 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | ||||||
| chrY:14697594 | G | GAGATAGA others(9): Show |
2 | a0001c0001t0002g0102 a0001c0002t0001g0005 |
2 | NA18995.hp1 NA19000.hp1 |
intron_variant | MODIFIER | c.473-21838_473-2182 others(20): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | ||||||
| chrY:14697594 | G | T | 8 | a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 others(5): Show |
8 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-21865G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14697594 | |||||||
| chrY:14697594 | GAGAT | G | 8 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0055 others(5): Show |
8 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-21826_473-2182 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14697594 | ||||||
| chrY:14698389 | GTA | G | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.473-21068_473-2106 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14698389 | ||||||
| chrY:14698552 | G | A | 1 | a0001c0001t0001g0086 | 1 | HG02895.hp1 | intron_variant | MODIFIER | c.473-20907G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14698552 | |||||||
| chrY:14698607 | C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.473-20852C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14698607 | |||||||
| chrY:14698654 | G | A | 1 | a0001c0001t0002g0094 | 1 | NA18962.hp1 | intron_variant | MODIFIER | c.473-20805G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14698654 | |||||||
| chrY:14699361 | C | T | 15 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(12): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.473-20098C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14699361 | |||||||
| chrY:14699426 | C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.473-20033C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14699426 | |||||||
| chrY:14700599 | TCTGA | T | 1 | a0001c0001t0002g0101 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.473-18857_473-1885 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14700599 | ||||||
| chrY:14700990 | C | G | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.473-18469C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14700990 | |||||||
| chrY:14701195 | G | GCA | 3 | a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0083 |
3 | HG02145.hp1 HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.473-18234_473-1823 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14701195 | ||||||
| chrY:14701195 | GCA | G | 92 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(89): Show |
92 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(89): Show |
intron_variant | MODIFIER | c.473-18234_473-1823 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14701195 | ||||||
| chrY:14701195 | GCACACA | G | 2 | a0001c0001t0001g0109 a0001c0001t0001g0117 |
2 | HG03098.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.473-18238_473-1823 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14701195 | ||||||
| chrY:14701530 | C | T | 2 | a0001c0001t0001g0007 a0001c0001t0001g0018 |
2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.473-17929C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14701530 | |||||||
| chrY:14701981 | T | TTTTA | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.473-17454_473-1745 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14701981 | ||||||
| chrY:14702123 | G | C | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.473-17336G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702123 | |||||||
| chrY:14702210 | G | A | 1 | a0001c0001t0001g0065 | 1 | HG01255.hp1 | intron_variant | MODIFIER | c.473-17249G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702210 | |||||||
| chrY:14702303 | T | C | 9 | a0001c0001t0001g0112 a0001c0001t0002g0029 a0001c0001t0002g0040 others(6): Show |
9 | HG00621.hp1 HG01167.hp1 HG02056.hp1 others(6): Show |
intron_variant | MODIFIER | c.473-17156T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702303 | |||||||
| chrY:14702306 | TA | T | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.473-17152delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702306 | |||||||
| chrY:14702307 | A | ACCCCCT | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-17151_473-1714 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14702307 | ||||||
| chrY:14702307 | A | C | 8 | a0001c0001t0002g0029 a0001c0001t0002g0040 a0001c0001t0002g0048 others(5): Show |
8 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-17152A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702307 | |||||||
| chrY:14702313 | TA | T | 8 | a0001c0001t0002g0029 a0001c0001t0002g0040 a0001c0001t0002g0048 others(5): Show |
8 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-17145delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702313 | |||||||
| chrY:14702314 | A | C | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-17145A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702314 | |||||||
| chrY:14702367 | G | T | 1 | a0001c0001t0002g0053 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.473-17092G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702367 | |||||||
| chrY:14702440 | G | A | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.473-17019G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702440 | |||||||
| chrY:14702611 | G | A | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.473-16848G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702611 | |||||||
| chrY:14702848 | A | G | 8 | a0001c0001t0002g0029 a0001c0001t0002g0040 a0001c0001t0002g0048 others(5): Show |
8 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-16611A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14702848 | |||||||
| chrY:14703005 | G | T | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.473-16454G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14703005 | |||||||
| chrY:14704221 | C | A | 1 | a0001c0001t0001g0059 | 1 | NA20752.hp1 | intron_variant | MODIFIER | c.473-15238C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704221 | |||||||
| chrY:14704469 | T | C | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.473-14990T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704469 | |||||||
| chrY:14704722 | T | A | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.473-14737T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704722 | |||||||
| chrY:14704892 | G | A | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-14567G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704892 | |||||||
| chrY:14704998 | G | A | 1 | a0001c0001t0001g0084 | 1 | HG02965.hp1 | intron_variant | MODIFIER | c.473-14461G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14704998 | |||||||
| chrY:14705522 | C | T | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.473-13937C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14705522 | |||||||
| chrY:14706043 | T | G | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.473-13416T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706043 | |||||||
| chrY:14706438 | G | T | 1 | a0001c0001t0001g0074 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.473-13021G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706438 | |||||||
| chrY:14706789 | T | TAA | 2 | a0001c0001t0001g0023 a0001c0001t0001g0042 |
2 | HG01192.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.473-12662_473-1266 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14706789 | ||||||
| chrY:14706789 | T | TAAAA | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.473-12664_473-1266 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14706789 | ||||||
| chrY:14706798 | AT | A | 19 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(16): Show |
19 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(16): Show |
intron_variant | MODIFIER | c.473-12660delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706798 | |||||||
| chrY:14706799 | T | A | 78 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(75): Show |
78 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(75): Show |
intron_variant | MODIFIER | c.473-12660T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706799 | |||||||
| chrY:14706801 | T | A | 56 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(53): Show |
56 | HG00280.hp1 HG00609.hp1 HG00621.hp1 others(53): Show |
intron_variant | MODIFIER | c.473-12658T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706801 | |||||||
| chrY:14706803 | T | A | 6 | a0001c0001t0001g0004 a0001c0001t0002g0024 a0001c0001t0002g0040 others(3): Show |
6 | HG02027.hp1 HG02056.hp1 HG02074.hp1 others(3): Show |
intron_variant | MODIFIER | c.473-12656T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14706803 | |||||||
| chrY:14707091 | G | GTA | 42 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(39): Show |
42 | HG00621.hp1 HG01109.hp1 HG01167.hp1 others(39): Show |
intron_variant | MODIFIER | c.473-12326_473-1232 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | G | GTATA | 9 | a0001c0001t0001g0032 a0001c0001t0001g0062 a0001c0001t0001g0067 others(6): Show |
9 | HG00280.hp1 HG01074.hp1 HG01952.hp1 others(6): Show |
intron_variant | MODIFIER | c.473-12328_473-1232 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | G | GTATATA | 8 | a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0019 others(5): Show |
8 | HG02132.hp1 HG04115.hp1 HG04204.hp1 others(5): Show |
intron_variant | MODIFIER | c.473-12330_473-1232 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | G | GTATATAT others(1): Show |
3 | a0001c0001t0001g0056 a0001c0001t0001g0070 a0001c0001t0002g0044 |
3 | HG00642.hp1 HG01934.hp1 NA18984.hp1 |
intron_variant | MODIFIER | c.473-12332_473-1232 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | G | GTGTATAT others(5): Show |
1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.473-12367_473-1236 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | GTA | G | 18 | a0001c0001t0001g0007 a0001c0001t0001g0014 a0001c0001t0001g0021 others(15): Show |
18 | HG00609.hp1 HG00673.hp1 HG00738.hp1 others(15): Show |
intron_variant | MODIFIER | c.473-12326_473-1232 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | GTATA | G | 5 | a0001c0001t0001g0059 a0001c0001t0001g0063 a0001c0001t0001g0064 others(2): Show |
5 | HG01255.hp1 HG01256.hp1 HG01258.hp1 others(2): Show |
intron_variant | MODIFIER | c.473-12328_473-1232 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | GTATATAT others(1): Show |
G | 1 | a0001c0001t0001g0004 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.473-12332_473-1232 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | GTATATAT others(11): Show |
G | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.473-12342_473-1232 others(22): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707091 | GTATATAT others(25): Show |
G | 1 | a0001c0001t0001g0074 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.473-12356_473-1232 others(36): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707091 | ||||||
| chrY:14707246 | A | T | 1 | a0001c0001t0001g0009 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.473-12213A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14707246 | |||||||
| chrY:14707670 | C | CA | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.473-11781dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14707670 | ||||||
| chrY:14708021 | G | A | 1 | a0001c0001t0001g0037 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.473-11438G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14708021 | |||||||
| chrY:14708589 | A | G | 15 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(12): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.473-10870A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14708589 | |||||||
| chrY:14709712 | TA | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.473-9735delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14709712 | ||||||
| chrY:14709763 | C | CTG | 2 | a0001c0001t0001g0015 a0001c0001t0001g0019 |
2 | NA18961.hp1 NA18970.hp1 |
intron_variant | MODIFIER | c.473-9695_473-9694d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14709763 | ||||||
| chrY:14710131 | G | A | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.473-9328G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14710131 | |||||||
| chrY:14711321 | T | C | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.473-8138T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14711321 | |||||||
| chrY:14711342 | A | T | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.473-8117A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14711342 | |||||||
| chrY:14712072 | T | TA | 4 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 others(1): Show |
4 | HG01255.hp1 HG01256.hp1 HG01258.hp1 others(1): Show |
intron_variant | MODIFIER | c.473-7370dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14712072 | ||||||
| chrY:14712072 | TA | T | 1 | a0001c0001t0002g0095 | 1 | NA18986.hp1 | intron_variant | MODIFIER | c.473-7370delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14712072 | ||||||
| chrY:14712102 | A | G | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.473-7357A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14712102 | |||||||
| chrY:14712357 | G | A | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.473-7102G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14712357 | |||||||
| chrY:14712390 | T | C | 15 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(12): Show |
15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.473-7069T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14712390 | |||||||
| chrY:14712472 | T | G | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.473-6987T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14712472 | |||||||
| chrY:14714762 | G | A | 2 | a0001c0001t0001g0036 a0001c0001t0001g0112 |
2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.473-4697G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14714762 | |||||||
| chrY:14715747 | C | T | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.473-3712C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14715747 | |||||||
| chrY:14715846 | A | G | 1 | a0001c0001t0001g0121 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.473-3613A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14715846 | |||||||
| chrY:14716635 | C | T | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.473-2824C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14716635 | |||||||
| chrY:14718789 | C | T | 1 | a0001c0001t0001g0081 | 1 | NA18747.hp1 | intron_variant | MODIFIER | c.473-670C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14718789 | |||||||
| chrY:14719259 | G | C | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.473-200G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | chrY | 14719259 | |||||||
| chrY:14719390 | A | AT | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.473-63dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chrY | 14719390 | ||||||
| chrY:14719540 | C | T | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.532+22C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14719540 | |||||||
| chrY:14720055 | T | A | 1 | a0001c0001t0002g0052 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.532+537T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14720055 | |||||||
| chrY:14720421 | G | GT | 15 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(12): Show |
15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.532+910dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14720421 | ||||||
| chrY:14720421 | G | GTT | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.532+909_532+910dup others(2): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14720421 | ||||||
| chrY:14720883 | T | C | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.532+1365T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14720883 | |||||||
| chrY:14721775 | T | TAC | 5 | a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0023 others(2): Show |
5 | HG00738.hp1 HG03225.hp1 NA18960.hp1 others(2): Show |
intron_variant | MODIFIER | c.533-1309_533-1308d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14721775 | ||||||
| chrY:14721775 | T | TACAC | 14 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(11): Show |
14 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(11): Show |
intron_variant | MODIFIER | c.533-1311_533-1308d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14721775 | ||||||
| chrY:14721775 | T | TACACAC | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.533-1313_533-1308d others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14721775 | ||||||
| chrY:14721775 | TAC | T | 3 | a0001c0001t0001g0017 a0001c0001t0001g0042 a0001c0001t0001g0079 |
3 | HG01192.hp1 HG03017.hp1 NA18966.hp1 |
intron_variant | MODIFIER | c.533-1309_533-1308d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14721775 | ||||||
| chrY:14722389 | G | T | 1 | a0001c0001t0001g0009 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.533-728G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14722389 | |||||||
| chrY:14722585 | C | T | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.533-532C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14722585 | |||||||
| chrY:14722796 | GGCGGA | G | 1 | a0001c0001t0001g0087 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.533-318_533-314del others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722796 | ||||||
| chrY:14722861 | C | T | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.533-256C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14722861 | |||||||
| chrY:14722866 | C | CA | 23 | a0001c0001t0001g0009 a0001c0001t0001g0041 a0001c0001t0001g0043 others(20): Show |
23 | HG00621.hp1 HG00738.hp1 HG01106.hp1 others(20): Show |
intron_variant | MODIFIER | c.533-206dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAA | 6 | a0001c0001t0001g0021 a0001c0001t0002g0027 a0001c0001t0002g0045 others(3): Show |
6 | HG00673.hp1 HG02040.hp1 HG02071.hp1 others(3): Show |
intron_variant | MODIFIER | c.533-207_533-206dup others(2): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAA | 3 | a0001c0001t0001g0016 a0001c0001t0001g0054 a0001c0001t0003g0026 |
3 | HG03490.hp1 NA18952.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.533-208_533-206dup others(3): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAA | 6 | a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0034 others(3): Show |
6 | HG02602.hp1 HG03492.hp1 HG04204.hp1 others(3): Show |
intron_variant | MODIFIER | c.533-209_533-206dup others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAA | 4 | a0001c0001t0001g0007 a0001c0001t0001g0018 a0001c0001t0001g0056 others(1): Show |
4 | HG00642.hp1 HG04228.hp1 NA18940.hp1 others(1): Show |
intron_variant | MODIFIER | c.533-210_533-206dup others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAAA | 7 | a0001c0001t0001g0004 a0001c0001t0001g0084 a0001c0001t0001g0086 others(4): Show |
7 | HG02698.hp1 HG02895.hp1 HG02965.hp1 others(4): Show |
intron_variant | MODIFIER | c.533-211_533-206dup others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAAAA | 9 | a0001c0001t0001g0017 a0001c0001t0001g0031 a0001c0001t0001g0035 others(6): Show |
9 | HG01109.hp1 HG02145.hp1 HG02258.hp1 others(6): Show |
intron_variant | MODIFIER | c.533-212_533-206dup others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAAAA others(1): Show |
7 | a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0037 others(4): Show |
7 | HG01099.hp1 HG02055.hp1 HG02486.hp1 others(4): Show |
intron_variant | MODIFIER | c.533-213_533-206dup others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAAAA others(2): Show |
2 | a0001c0001t0001g0036 a0001c0001t0001g0076 |
2 | HG00140.hp1 HG04115.hp1 |
intron_variant | MODIFIER | c.533-214_533-206dup others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAAAA others(3): Show |
2 | a0001c0001t0001g0032 a0001c0001t0001g0089 |
2 | HG01074.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.533-215_533-206dup others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAAAA others(4): Show |
1 | a0001c0001t0001g0092 | 1 | HG03130.hp1 | intron_variant | MODIFIER | c.533-216_533-206dup others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAAAA others(5): Show |
1 | a0001c0001t0001g0115 | 1 | NA18971.hp1 | intron_variant | MODIFIER | c.533-217_533-206dup others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | C | CAAAAAAA others(6): Show |
1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.533-218_533-206dup others(13): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CA | C | 5 | a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0010 others(2): Show |
5 | NA18944.hp1 NA18948.hp1 NA18983.hp1 others(2): Show |
intron_variant | MODIFIER | c.533-206delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAA | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.533-209_533-206del others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA | C | 2 | a0001c0001t0001g0109 a0002c0003t0001g0110 |
2 | NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.533-212_533-206del others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA others(1): Show |
C | 1 | a0001c0001t0001g0111 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.533-213_533-206del others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA others(4): Show |
C | 2 | a0001c0001t0001g0019 a0001c0001t0002g0101 |
2 | NA18961.hp1 NA18994.hp1 |
intron_variant | MODIFIER | c.533-216_533-206del others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA others(9): Show |
C | 1 | a0001c0001t0002g0044 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.533-221_533-206del others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA others(11): Show |
C | 3 | a0001c0001t0001g0042 a0001c0001t0002g0119 a0001c0001t0002g0120 |
3 | HG01192.hp1 HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.533-223_533-206del others(18): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA others(14): Show |
C | 8 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0038 others(5): Show |
8 | HG01255.hp1 HG01256.hp1 HG01258.hp1 others(5): Show |
intron_variant | MODIFIER | c.533-226_533-206del others(21): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA others(15): Show |
C | 2 | a0001c0001t0001g0030 a0001c0001t0001g0112 |
2 | HG01069.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.533-227_533-206del others(22): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA others(17): Show |
C | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.533-229_533-206del others(24): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722866 | CAAAAAAA others(22): Show |
C | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.533-234_533-206del others(29): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chrY | 14722866 | ||||||
| chrY:14722889 | A | G | 2 | a0001c0001t0002g0098 a0001c0001t0002g0100 |
2 | NA18965.hp1 NA19005.hp1 |
intron_variant | MODIFIER | c.533-228A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 3/6 | chrY | 14722889 | |||||||
| chrY:14723376 | T | G | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+107T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14723376 | |||||||
| chrY:14723406 | T | C | 1 | a0001c0001t0001g0067 | 1 | HG04228.hp1 | intron_variant | MODIFIER | c.685+137T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14723406 | |||||||
| chrY:14723511 | G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+242G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14723511 | |||||||
| chrY:14724031 | G | GT | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.685+769dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14724031 | ||||||
| chrY:14724199 | C | A | 2 | a0001c0001t0001g0036 a0001c0001t0001g0112 |
2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.685+930C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14724199 | |||||||
| chrY:14724387 | G | GT | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+1129dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14724387 | ||||||
| chrY:14724547 | T | A | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.685+1278T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14724547 | |||||||
| chrY:14724668 | G | A | 2 | a0001c0001t0001g0036 a0001c0001t0001g0112 |
2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.685+1399G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14724668 | |||||||
| chrY:14725457 | C | G | 1 | a0001c0001t0001g0028 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.685+2188C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14725457 | |||||||
| chrY:14725689 | C | G | 4 | a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0002g0119 others(1): Show |
4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+2420C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14725689 | |||||||
| chrY:14726061 | G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+2792G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14726061 | |||||||
| chrY:14726165 | A | G | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.685+2896A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14726165 | |||||||
| chrY:14727082 | A | AAAAG | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+3833_685+3836d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14727082 | ||||||
| chrY:14727761 | T | A | 43 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(40): Show |
43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.685+4492T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14727761 | |||||||
| chrY:14727930 | C | T | 10 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0030 others(7): Show |
10 | HG00140.hp1 HG01069.hp1 HG01167.hp1 others(7): Show |
intron_variant | MODIFIER | c.685+4661C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14727930 | |||||||
| chrY:14728232 | CTT | C | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.685+4965_685+4966d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14728232 | ||||||
| chrY:14728379 | T | C | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+5110T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14728379 | |||||||
| chrY:14728891 | C | T | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.685+5622C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14728891 | |||||||
| chrY:14728937 | G | T | 15 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(12): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.685+5668G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14728937 | |||||||
| chrY:14729454 | G | A | 4 | a0001c0001t0001g0022 a0001c0001t0001g0062 a0001c0001t0001g0074 others(1): Show |
4 | HG01928.hp1 HG01952.hp1 HG02132.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+6185G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14729454 | |||||||
| chrY:14730197 | C | T | 17 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(14): Show |
17 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(14): Show |
intron_variant | MODIFIER | c.685+6928C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14730197 | |||||||
| chrY:14730916 | G | C | 2 | a0001c0001t0001g0062 a0001c0001t0001g0074 |
2 | HG01928.hp1 HG01952.hp1 |
intron_variant | MODIFIER | c.685+7647G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14730916 | |||||||
| chrY:14730987 | A | ATG | 29 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0018 others(26): Show |
29 | HG01069.hp1 HG01099.hp1 HG01106.hp1 others(26): Show |
intron_variant | MODIFIER | c.685+7762_685+7763d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | ||||||
| chrY:14730987 | A | ATGTG | 10 | a0001c0001t0001g0001 a0001c0001t0001g0055 a0001c0001t0001g0062 others(7): Show |
10 | HG00609.hp1 HG01928.hp1 HG01952.hp1 others(7): Show |
intron_variant | MODIFIER | c.685+7760_685+7763d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | ||||||
| chrY:14730987 | A | ATGTGTG | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.685+7758_685+7763d others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | ||||||
| chrY:14730987 | ATG | A | 22 | a0001c0001t0001g0042 a0001c0001t0001g0081 a0001c0001t0001g0112 others(19): Show |
22 | HG01167.hp1 HG01192.hp1 HG02074.hp1 others(19): Show |
intron_variant | MODIFIER | c.685+7762_685+7763d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | ||||||
| chrY:14730987 | ATGTG | A | 2 | a0001c0001t0001g0069 a0001c0001t0003g0025 |
2 | HG01261.hp1 HG02083.hp1 |
intron_variant | MODIFIER | c.685+7760_685+7763d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | ||||||
| chrY:14730987 | ATGTGTG | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+7758_685+7763d others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | ||||||
| chrY:14730987 | ATGTGTGT others(5): Show |
A | 2 | a0001c0001t0001g0116 a0001c0001t0002g0027 |
2 | HG00673.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.685+7752_685+7763d others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14730987 | ||||||
| chrY:14731031 | GTA | G | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.685+7765_685+7766d others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14731031 | ||||||
| chrY:14731893 | C | CA | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.685+8632dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14731893 | ||||||
| chrY:14731942 | C | T | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.685+8673C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14731942 | |||||||
| chrY:14732236 | A | G | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.685+8967A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14732236 | |||||||
| chrY:14732616 | G | GT | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+9351dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14732616 | ||||||
| chrY:14732651 | TA | T | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+9386delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14732651 | ||||||
| chrY:14732770 | C | T | 1 | a0001c0001t0003g0025 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.685+9501C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14732770 | |||||||
| chrY:14732796 | A | C | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.685+9527A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14732796 | |||||||
| chrY:14733256 | AT | A | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+9990delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14733256 | ||||||
| chrY:14733527 | A | AT | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+10266dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14733527 | ||||||
| chrY:14733650 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+10381G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14733650 | |||||||
| chrY:14733655 | TC | T | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+10389delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14733655 | ||||||
| chrY:14733927 | C | T | 1 | a0001c0001t0001g0089 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.685+10658C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14733927 | |||||||
| chrY:14734401 | G | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.685+11132G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14734401 | |||||||
| chrY:14734559 | C | A | 17 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(14): Show |
17 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(14): Show |
intron_variant | MODIFIER | c.685+11290C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14734559 | |||||||
| chrY:14735245 | A | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+11976A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14735245 | |||||||
| chrY:14735480 | C | A | 1 | a0001c0001t0001g0058 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.685+12211C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14735480 | |||||||
| chrY:14735921 | G | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.685+12652G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14735921 | |||||||
| chrY:14736179 | A | G | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.685+12910A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14736179 | |||||||
| chrY:14736204 | T | C | 3 | a0001c0001t0002g0024 a0001c0001t0003g0025 a0001c0001t0003g0026 |
3 | HG02074.hp1 HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.685+12935T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14736204 | |||||||
| chrY:14736616 | C | T | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.685+13347C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14736616 | |||||||
| chrY:14740161 | C | T | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.685+16892C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14740161 | |||||||
| chrY:14741673 | T | C | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.685+18404T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14741673 | |||||||
| chrY:14742598 | A | G | 1 | a0001c0001t0002g0107 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.685+19329A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14742598 | |||||||
| chrY:14742716 | C | T | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+19447C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14742716 | |||||||
| chrY:14742920 | C | T | 37 | a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0002g0024 others(34): Show |
37 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(34): Show |
intron_variant | MODIFIER | c.685+19651C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14742920 | |||||||
| chrY:14743066 | G | A | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+19797G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14743066 | |||||||
| chrY:14743492 | T | TA | 3 | a0001c0001t0001g0018 a0001c0001t0002g0040 a0001c0001t0002g0047 |
3 | NA18940.hp1 NA18982.hp1 NA19083.hp1 |
intron_variant | MODIFIER | c.685+20240dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14743492 | ||||||
| chrY:14743492 | TA | T | 7 | a0001c0001t0001g0007 a0001c0001t0001g0014 a0001c0001t0001g0022 others(4): Show |
7 | HG01069.hp1 HG02015.hp1 HG02132.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+20240delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14743492 | ||||||
| chrY:14743493 | A | T | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.685+20224A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14743493 | |||||||
| chrY:14743901 | C | T | 35 | a0001c0001t0002g0024 a0001c0001t0002g0027 a0001c0001t0002g0029 others(32): Show |
35 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(32): Show |
intron_variant | MODIFIER | c.685+20632C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14743901 | |||||||
| chrY:14744193 | C | T | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.685+20924C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14744193 | |||||||
| chrY:14744477 | C | T | 102 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(99): Show |
102 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(99): Show |
intron_variant | MODIFIER | c.685+21208C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14744477 | |||||||
| chrY:14744556 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+21287G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14744556 | |||||||
| chrY:14745251 | C | T | 3 | a0001c0001t0002g0024 a0001c0001t0003g0025 a0001c0001t0003g0026 |
3 | HG02074.hp1 HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.685+21982C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14745251 | |||||||
| chrY:14745974 | AT | A | 1 | a0001c0002t0001g0005 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.685+22716delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14745974 | ||||||
| chrY:14746186 | G | A | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.685+22917G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14746186 | |||||||
| chrY:14746313 | G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.685+23044G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14746313 | |||||||
| chrY:14746478 | A | T | 2 | a0001c0001t0001g0041 a0001c0001t0001g0043 |
2 | HG03688.hp1 HG04199.hp1 |
intron_variant | MODIFIER | c.685+23209A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14746478 | |||||||
| chrY:14747374 | A | G | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.685+24105A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14747374 | |||||||
| chrY:14747577 | A | G | 1 | a0001c0001t0002g0078 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.685+24308A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14747577 | |||||||
| chrY:14747851 | AT | A | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+24584delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14747851 | ||||||
| chrY:14748835 | G | A | 1 | a0001c0001t0002g0101 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.685+25566G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748835 | |||||||
| chrY:14748869 | C | CA | 2 | a0001c0001t0001g0061 a0001c0001t0001g0072 |
2 | HG00738.hp1 HG01358.hp1 |
intron_variant | MODIFIER | c.685+25624dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748869 | ||||||
| chrY:14748869 | CA | C | 3 | a0001c0001t0001g0001 a0001c0001t0001g0055 a0001c0001t0001g0058 |
3 | HG01943.hp1 HG02735.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.685+25624delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748869 | ||||||
| chrY:14748888 | A | G | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+25619A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748888 | |||||||
| chrY:14748890 | AAAAG | A | 5 | a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0090 others(2): Show |
5 | HG02055.hp1 HG02145.hp1 HG02486.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+25625_685+2562 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748890 | ||||||
| chrY:14748891 | AAAG | A | 2 | a0001c0001t0001g0068 a0001c0001t0001g0081 |
2 | HG02738.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.685+25625_685+2562 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748891 | ||||||
| chrY:14748894 | G | A | 20 | a0001c0001t0001g0017 a0001c0001t0001g0037 a0001c0001t0001g0080 others(17): Show |
20 | HG00280.hp1 HG02074.hp1 HG02135.hp1 others(17): Show |
intron_variant | MODIFIER | c.685+25625G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748894 | |||||||
| chrY:14748895 | A | G | 12 | a0001c0001t0001g0017 a0001c0001t0001g0037 a0001c0001t0001g0080 others(9): Show |
12 | HG00280.hp1 HG02074.hp1 HG02135.hp1 others(9): Show |
intron_variant | MODIFIER | c.685+25626A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748895 | |||||||
| chrY:14748896 | A | G | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.685+25627A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748896 | |||||||
| chrY:14748897 | A | G | 7 | a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 others(4): Show |
7 | HG02258.hp1 HG02895.hp1 HG02965.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+25628A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748897 | |||||||
| chrY:14748898 | A | G | 2 | a0001c0001t0001g0068 a0001c0001t0001g0081 |
2 | HG02738.hp1 NA18747.hp1 |
intron_variant | MODIFIER | c.685+25629A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748898 | |||||||
| chrY:14748900 | AAAAG | A | 11 | a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0038 others(8): Show |
11 | HG00642.hp1 HG01069.hp1 HG01167.hp1 others(8): Show |
intron_variant | MODIFIER | c.685+25667_685+2567 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748900 | ||||||
| chrY:14748900 | AAAAGAAA others(1): Show |
A | 73 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(70): Show |
73 | HG00140.hp1 HG00609.hp1 HG00621.hp1 others(70): Show |
intron_variant | MODIFIER | c.685+25663_685+2567 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748900 | ||||||
| chrY:14748901 | AAAGAAAG | A | 12 | a0001c0001t0001g0017 a0001c0001t0001g0037 a0001c0001t0001g0080 others(9): Show |
12 | HG00280.hp1 HG02074.hp1 HG02135.hp1 others(9): Show |
intron_variant | MODIFIER | c.685+25635_685+2564 others(11): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748901 | ||||||
| chrY:14748902 | A | G | 5 | a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0090 others(2): Show |
5 | HG02055.hp1 HG02145.hp1 HG02486.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+25633A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748902 | |||||||
| chrY:14748902 | AAGAAAG | A | 1 | a0002c0003t0001g0110 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.685+25635_685+2564 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14748902 | ||||||
| chrY:14748903 | AGAAAG | A | 7 | a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 others(4): Show |
7 | HG02258.hp1 HG02895.hp1 HG02965.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+25635_685+2563 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748903 | |||||||
| chrY:14748904 | G | A | 7 | a0001c0001t0001g0068 a0001c0001t0001g0081 a0001c0001t0001g0083 others(4): Show |
7 | HG02055.hp1 HG02145.hp1 HG02486.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+25635G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748904 | |||||||
| chrY:14748908 | G | A | 5 | a0001c0001t0001g0083 a0001c0001t0001g0088 a0001c0001t0001g0090 others(2): Show |
5 | HG02055.hp1 HG02145.hp1 HG02486.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+25639G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14748908 | |||||||
| chrY:14749228 | G | A | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.685+25959G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14749228 | |||||||
| chrY:14751047 | G | A | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.685+27778G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751047 | |||||||
| chrY:14751216 | G | T | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.685+27947G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751216 | |||||||
| chrY:14751379 | G | C | 38 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(35): Show |
38 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(35): Show |
intron_variant | MODIFIER | c.685+28110G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751379 | |||||||
| chrY:14751663 | A | AT | 4 | a0001c0001t0001g0002 a0001c0001t0001g0109 a0001c0001t0001g0111 others(1): Show |
4 | NA18612.hp1 NA19079.hp1 NA19091.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+28408dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14751663 | ||||||
| chrY:14751699 | A | G | 1 | a0001c0001t0001g0032 | 1 | HG01074.hp1 | intron_variant | MODIFIER | c.685+28430A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751699 | |||||||
| chrY:14751921 | G | T | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.685+28652G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14751921 | |||||||
| chrY:14752038 | C | A | 5 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+28769C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14752038 | |||||||
| chrY:14753568 | T | C | 1 | a0001c0001t0001g0038 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.685+30299T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14753568 | |||||||
| chrY:14753843 | G | A | 1 | a0001c0001t0001g0089 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.685+30574G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14753843 | |||||||
| chrY:14753877 | G | C | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.685+30608G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14753877 | |||||||
| chrY:14754621 | T | G | 1 | a0001c0001t0002g0029 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.685+31352T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14754621 | |||||||
| chrY:14755131 | G | A | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+31862G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14755131 | |||||||
| chrY:14755435 | C | T | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.685+32166C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14755435 | |||||||
| chrY:14755802 | T | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.685+32533T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14755802 | |||||||
| chrY:14756074 | T | C | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.685+32805T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756074 | |||||||
| chrY:14756426 | C | G | 2 | a0001c0001t0002g0119 a0001c0001t0002g0120 |
2 | HG02129.hp1 HG02135.hp1 |
intron_variant | MODIFIER | c.685+33157C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756426 | |||||||
| chrY:14756545 | C | T | 2 | a0001c0001t0001g0002 a0001c0001t0001g0021 |
2 | HG02040.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.685+33276C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756545 | |||||||
| chrY:14756581 | C | G | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.685+33312C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756581 | |||||||
| chrY:14756635 | C | G | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.685+33366C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756635 | |||||||
| chrY:14756693 | C | T | 1 | a0001c0001t0001g0074 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.685+33424C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756693 | |||||||
| chrY:14756751 | G | GTA | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.685+33494_685+3349 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756751 | ||||||
| chrY:14756866 | C | CAT | 1 | a0001c0001t0001g0035 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.685+33640_685+3364 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756866 | C | CATAT | 4 | a0001c0001t0001g0083 a0001c0001t0001g0115 a0001c0001t0001g0116 others(1): Show |
4 | HG02145.hp1 HG03225.hp1 NA18971.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+33638_685+3364 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756866 | C | CATATAT | 2 | a0001c0001t0001g0023 a0001c0001t0001g0041 |
2 | HG04199.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.685+33636_685+3364 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756866 | CAT | C | 4 | a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0086 others(1): Show |
4 | HG01074.hp1 HG02895.hp1 HG03710.hp1 others(1): Show |
intron_variant | MODIFIER | c.685+33640_685+3364 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756866 | CATAT | C | 20 | a0001c0001t0001g0028 a0001c0001t0001g0037 a0001c0001t0001g0056 others(17): Show |
20 | HG00280.hp1 HG00642.hp1 HG00738.hp1 others(17): Show |
intron_variant | MODIFIER | c.685+33638_685+3364 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756866 | CATATAT | C | 16 | a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0042 others(13): Show |
16 | HG01192.hp1 HG01255.hp1 HG01256.hp1 others(13): Show |
intron_variant | MODIFIER | c.685+33636_685+3364 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756866 | CATATATA others(1): Show |
C | 26 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(23): Show |
26 | HG00140.hp1 HG00609.hp1 HG00673.hp1 others(23): Show |
intron_variant | MODIFIER | c.685+33634_685+3364 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756866 | CATATATA others(3): Show |
C | 41 | a0001c0001t0001g0001 a0001c0001t0001g0021 a0001c0001t0001g0022 others(38): Show |
41 | HG00621.hp1 HG01167.hp1 HG01928.hp1 others(38): Show |
intron_variant | MODIFIER | c.685+33632_685+3364 others(14): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756866 | CATATATA others(5): Show |
C | 2 | a0001c0001t0001g0002 a0001c0001t0002g0040 |
2 | NA19083.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.685+33630_685+3364 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14756866 | ||||||
| chrY:14756893 | A | T | 7 | a0001c0001t0002g0029 a0001c0001t0002g0048 a0001c0001t0002g0049 others(4): Show |
7 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+33624A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756893 | |||||||
| chrY:14756894 | T | C | 7 | a0001c0001t0002g0029 a0001c0001t0002g0048 a0001c0001t0002g0049 others(4): Show |
7 | HG00621.hp1 HG02056.hp1 NA18945.hp1 others(4): Show |
intron_variant | MODIFIER | c.685+33625T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756894 | |||||||
| chrY:14756895 | A | T | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+33626A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756895 | |||||||
| chrY:14756896 | T | C | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.685+33627T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14756896 | |||||||
| chrY:14757150 | T | G | 3 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 |
3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.685+33881T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14757150 | |||||||
| chrY:14757678 | G | T | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.685+34409G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14757678 | |||||||
| chrY:14757790 | C | T | 2 | a0001c0001t0001g0007 a0001c0001t0001g0018 |
2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.685+34521C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14757790 | |||||||
| chrY:14757793 | A | G | 1 | a0001c0001t0002g0097 | 1 | NA19007.hp1 | intron_variant | MODIFIER | c.685+34524A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14757793 | |||||||
| chrY:14758075 | G | C | 8 | a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 others(5): Show |
8 | NA18944.hp1 NA18948.hp1 NA18967.hp1 others(5): Show |
intron_variant | MODIFIER | c.685+34806G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14758075 | |||||||
| chrY:14758112 | G | A | 1 | a0001c0001t0001g0036 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.685+34843G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14758112 | |||||||
| chrY:14759107 | G | C | 35 | a0001c0001t0002g0024 a0001c0001t0002g0027 a0001c0001t0002g0029 others(32): Show |
35 | HG00609.hp1 HG00621.hp1 HG00673.hp1 others(32): Show |
intron_variant | MODIFIER | c.685+35838G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14759107 | |||||||
| chrY:14759290 | T | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.685+36021T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14759290 | |||||||
| chrY:14759929 | C | A | 5 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+36660C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14759929 | |||||||
| chrY:14759954 | A | G | 1 | a0001c0001t0001g0004 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.685+36685A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14759954 | |||||||
| chrY:14761523 | C | T | 1 | a0001c0001t0002g0049 | 1 | NA19085.hp1 | intron_variant | MODIFIER | c.685+38254C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14761523 | |||||||
| chrY:14761764 | C | T | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.685+38495C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14761764 | |||||||
| chrY:14762322 | G | A | 1 | a0001c0001t0002g0048 | 1 | NA19062.hp1 | intron_variant | MODIFIER | c.685+39053G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14762322 | |||||||
| chrY:14763888 | A | G | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.685+40619A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14763888 | |||||||
| chrY:14765018 | C | A | 2 | a0001c0001t0002g0029 a0001c0001t0002g0078 |
2 | HG02056.hp1 NA18959.hp1 |
intron_variant | MODIFIER | c.685+41749C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14765018 | |||||||
| chrY:14765026 | CAT | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.685+41759_685+4176 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14765026 | ||||||
| chrY:14765210 | A | G | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.685+41941A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14765210 | |||||||
| chrY:14766870 | A | C | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.685+43601A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14766870 | |||||||
| chrY:14767022 | A | C | 1 | a0001c0001t0001g0092 | 1 | HG03130.hp1 | intron_variant | MODIFIER | c.685+43753A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14767022 | |||||||
| chrY:14768205 | C | T | 5 | a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 others(2): Show |
5 | HG00621.hp1 NA18945.hp1 NA19062.hp1 others(2): Show |
intron_variant | MODIFIER | c.685+44936C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14768205 | |||||||
| chrY:14768723 | G | T | 15 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(12): Show |
15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.685+45454G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14768723 | |||||||
| chrY:14769075 | A | C | 1 | a0001c0001t0002g0045 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.685+45806A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14769075 | |||||||
| chrY:14769262 | C | T | 3 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 |
3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.685+45993C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14769262 | |||||||
| chrY:14769684 | A | AC | 1 | a0001c0001t0001g0076 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.685+46419dupC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14769684 | ||||||
| chrY:14769821 | A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.685+46552A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14769821 | |||||||
| chrY:14769900 | G | A | 1 | a0001c0001t0001g0028 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.685+46631G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14769900 | |||||||
| chrY:14770688 | C | T | 102 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(99): Show |
102 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(99): Show |
intron_variant | MODIFIER | c.685+47419C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14770688 | |||||||
| chrY:14770736 | T | G | 1 | a0001c0001t0001g0062 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.685+47467T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14770736 | |||||||
| chrY:14770942 | G | A | 1 | a0001c0001t0002g0048 | 1 | NA19062.hp1 | intron_variant | MODIFIER | c.685+47673G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14770942 | |||||||
| chrY:14771247 | A | G | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.685+47978A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14771247 | |||||||
| chrY:14772119 | C | T | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.685+48850C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14772119 | |||||||
| chrY:14773560 | G | GA | 1 | a0001c0001t0001g0068 | 1 | HG02738.hp1 | intron_variant | MODIFIER | c.685+50301dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14773560 | ||||||
| chrY:14773694 | A | T | 3 | a0001c0001t0002g0044 a0001c0001t0002g0046 a0001c0001t0002g0047 |
3 | HG00609.hp1 NA18982.hp1 NA18984.hp1 |
intron_variant | MODIFIER | c.685+50425A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14773694 | |||||||
| chrY:14773870 | C | T | 7 | a0001c0001t0001g0034 a0001c0001t0001g0054 a0001c0001t0001g0066 others(4): Show |
7 | HG02602.hp1 HG02738.hp1 HG03490.hp1 others(4): Show |
intron_variant | MODIFIER | c.686-50318C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14773870 | |||||||
| chrY:14774581 | C | T | 3 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 |
3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.686-49607C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14774581 | |||||||
| chrY:14775031 | C | T | 12 | a0001c0001t0002g0027 a0001c0001t0002g0029 a0001c0001t0002g0040 others(9): Show |
12 | HG00621.hp1 HG00673.hp1 HG02056.hp1 others(9): Show |
intron_variant | MODIFIER | c.686-49157C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14775031 | |||||||
| chrY:14775183 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-49005G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14775183 | |||||||
| chrY:14775326 | T | C | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.686-48862T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14775326 | |||||||
| chrY:14775904 | C | G | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.686-48284C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14775904 | |||||||
| chrY:14776204 | A | C | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.686-47984A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776204 | |||||||
| chrY:14776340 | A | G | 5 | a0001c0001t0001g0030 a0001c0001t0001g0038 a0001c0001t0001g0063 others(2): Show |
5 | HG01069.hp1 HG01255.hp1 HG01256.hp1 others(2): Show |
intron_variant | MODIFIER | c.686-47848A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776340 | |||||||
| chrY:14776611 | T | C | 1 | a0001c0001t0002g0033 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.686-47577T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776611 | |||||||
| chrY:14776977 | G | T | 1 | a0001c0001t0002g0099 | 1 | NA19070.hp1 | intron_variant | MODIFIER | c.686-47211G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776977 | |||||||
| chrY:14776994 | C | T | 1 | a0001c0001t0001g0083 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.686-47194C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14776994 | |||||||
| chrY:14777463 | C | G | 1 | a0001c0001t0001g0079 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.686-46725C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14777463 | |||||||
| chrY:14778034 | T | TATAA | 86 | a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(83): Show |
86 | HG00280.hp1 HG00609.hp1 HG00621.hp1 others(83): Show |
intron_variant | MODIFIER | c.686-46113_686-4611 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14778034 | ||||||
| chrY:14778034 | T | TATAAATA others(1): Show |
5 | a0001c0001t0001g0004 a0001c0001t0001g0036 a0001c0001t0001g0042 others(2): Show |
5 | HG00140.hp1 HG01192.hp1 HG01928.hp1 others(2): Show |
intron_variant | MODIFIER | c.686-46117_686-4611 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14778034 | ||||||
| chrY:14778034 | T | TATAAATA others(5): Show |
1 | a0001c0001t0002g0101 | 1 | NA18994.hp1 | intron_variant | MODIFIER | c.686-46121_686-4611 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14778034 | ||||||
| chrY:14778994 | G | A | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.686-45194G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14778994 | |||||||
| chrY:14779159 | C | T | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-45029C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14779159 | |||||||
| chrY:14779888 | C | T | 1 | a0001c0001t0001g0009 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.686-44300C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14779888 | |||||||
| chrY:14781000 | T | A | 15 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(12): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.686-43188T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14781000 | |||||||
| chrY:14781847 | C | A | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.686-42341C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14781847 | |||||||
| chrY:14782740 | C | T | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.686-41448C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14782740 | |||||||
| chrY:14783309 | A | G | 3 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 |
3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.686-40879A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14783309 | |||||||
| chrY:14783397 | C | T | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-40791C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14783397 | |||||||
| chrY:14783684 | A | G | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-40504A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14783684 | |||||||
| chrY:14783755 | CAT | C | 4 | a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0002g0119 others(1): Show |
4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-40432_686-4043 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14783755 | |||||||
| chrY:14784268 | G | A | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.686-39920G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14784268 | |||||||
| chrY:14784477 | G | A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-39711G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14784477 | |||||||
| chrY:14784659 | C | CA | 2 | a0001c0001t0001g0117 a0001c0001t0004g0114 |
2 | HG02647.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.686-39512dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14784659 | ||||||
| chrY:14784659 | C | CAA | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.686-39513_686-3951 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14784659 | ||||||
| chrY:14784659 | CA | C | 3 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 |
3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.686-39512delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14784659 | ||||||
| chrY:14785338 | C | CT | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.686-38848dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14785338 | ||||||
| chrY:14785738 | T | A | 15 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 others(12): Show |
15 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(12): Show |
intron_variant | MODIFIER | c.686-38450T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14785738 | |||||||
| chrY:14785763 | C | CA | 13 | a0001c0001t0001g0013 a0001c0001t0001g0021 a0001c0001t0001g0035 others(10): Show |
13 | HG00280.hp1 HG01109.hp1 HG01192.hp1 others(10): Show |
intron_variant | MODIFIER | c.686-38402dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14785763 | ||||||
| chrY:14785763 | CA | C | 4 | a0001c0001t0001g0008 a0001c0001t0001g0064 a0001c0001t0001g0112 others(1): Show |
4 | HG01167.hp1 HG01256.hp1 HG02647.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-38402delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14785763 | ||||||
| chrY:14785932 | GAAAAA | G | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.686-38252_686-3824 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14785932 | ||||||
| chrY:14786275 | T | C | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.686-37913T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14786275 | |||||||
| chrY:14787580 | T | G | 1 | a0001c0001t0001g0057 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.686-36608T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14787580 | |||||||
| chrY:14787620 | T | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-36568T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14787620 | |||||||
| chrY:14788367 | G | A | 3 | a0001c0001t0001g0023 a0001c0001t0004g0114 a0001c0001t0005g0077 |
3 | HG02647.hp1 HG03225.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.686-35821G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14788367 | |||||||
| chrY:14788648 | A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-35540A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14788648 | |||||||
| chrY:14788691 | T | C | 1 | a0001c0001t0001g0021 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.686-35497T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14788691 | |||||||
| chrY:14790031 | A | AT | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.686-34147dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14790031 | ||||||
| chrY:14790190 | A | G | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.686-33998A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14790190 | |||||||
| chrY:14790554 | A | G | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.686-33634A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14790554 | |||||||
| chrY:14790783 | C | T | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.686-33405C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14790783 | |||||||
| chrY:14791171 | A | T | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.686-33017A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14791171 | |||||||
| chrY:14791202 | G | C | 3 | a0001c0001t0002g0024 a0001c0001t0003g0025 a0001c0001t0003g0026 |
3 | HG02074.hp1 HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.686-32986G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14791202 | |||||||
| chrY:14792631 | G | GA | 2 | a0001c0001t0001g0030 a0001c0001t0001g0038 |
2 | HG01069.hp1 HG01433.hp1 |
intron_variant | MODIFIER | c.686-31548dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792631 | ||||||
| chrY:14792784 | C | CA | 23 | a0001c0001t0001g0002 a0001c0001t0001g0032 a0001c0001t0001g0035 others(20): Show |
23 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(20): Show |
intron_variant | MODIFIER | c.686-31364dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | C | CAA | 10 | a0001c0001t0001g0034 a0001c0001t0001g0054 a0001c0001t0001g0068 others(7): Show |
10 | HG00673.hp1 HG02071.hp1 HG02135.hp1 others(7): Show |
intron_variant | MODIFIER | c.686-31365_686-3136 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | C | CAAA | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.686-31366_686-3136 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | C | CAAAAA | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.686-31368_686-3136 others(9): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | C | CAAAAAA | 1 | a0001c0001t0001g0017 | 1 | NA18966.hp1 | intron_variant | MODIFIER | c.686-31369_686-3136 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | CA | C | 27 | a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(24): Show |
27 | HG00280.hp1 HG01167.hp1 HG01943.hp1 others(24): Show |
intron_variant | MODIFIER | c.686-31364delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | CAA | C | 16 | a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0014 others(13): Show |
16 | HG00140.hp1 HG01069.hp1 HG01255.hp1 others(13): Show |
intron_variant | MODIFIER | c.686-31365_686-3136 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | CAAA | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-31366_686-3136 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | CAAAAAAA others(4): Show |
C | 1 | a0001c0001t0001g0082 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.686-31374_686-3136 others(15): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | CAAAAAAA others(5): Show |
C | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.686-31375_686-3136 others(16): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792784 | CAAAAAAA others(16): Show |
C | 1 | a0001c0001t0002g0046 | 1 | HG00609.hp1 | intron_variant | MODIFIER | c.686-31386_686-3136 others(27): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792784 | ||||||
| chrY:14792840 | A | AAG | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.686-31337_686-3133 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792840 | ||||||
| chrY:14792849 | A | AGT | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.686-31338_686-3133 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792849 | ||||||
| chrY:14792851 | A | AGAGT | 2 | a0001c0001t0001g0042 a0001c0001t0001g0087 |
2 | HG01192.hp1 HG03209.hp1 |
intron_variant | MODIFIER | c.686-31336_686-3133 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | ||||||
| chrY:14792851 | A | AGAGTGT | 3 | a0001c0001t0001g0057 a0001c0001t0001g0089 a0001c0001t0001g0090 |
3 | HG01106.hp1 HG02055.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.686-31336_686-3133 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | ||||||
| chrY:14792851 | A | AGT | 27 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0007 others(24): Show |
27 | HG00140.hp1 HG00642.hp1 HG01069.hp1 others(24): Show |
intron_variant | MODIFIER | c.686-31298_686-3129 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | ||||||
| chrY:14792851 | A | AGTGT | 30 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 others(27): Show |
30 | HG01515.hp1 HG01928.hp1 HG01952.hp1 others(27): Show |
intron_variant | MODIFIER | c.686-31300_686-3129 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | ||||||
| chrY:14792851 | A | AGTGTGT | 5 | a0001c0001t0001g0012 a0001c0001t0001g0032 a0001c0001t0001g0035 others(2): Show |
5 | HG01074.hp1 HG01109.hp1 HG01433.hp1 others(2): Show |
intron_variant | MODIFIER | c.686-31302_686-3129 others(10): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | ||||||
| chrY:14792851 | A | T | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.686-31337A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14792851 | |||||||
| chrY:14792851 | AGT | A | 4 | a0001c0001t0001g0061 a0001c0001t0001g0079 a0001c0001t0001g0081 others(1): Show |
4 | HG00738.hp1 HG02083.hp1 HG03017.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-31298_686-3129 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | ||||||
| chrY:14792851 | AGTGTGTG others(1): Show |
A | 4 | a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0002g0119 others(1): Show |
4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-31304_686-3129 others(12): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | ||||||
| chrY:14792851 | AGTGTGTG others(13): Show |
A | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-31316_686-3129 others(24): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14792851 | ||||||
| chrY:14792853 | T | A | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.686-31335T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14792853 | |||||||
| chrY:14792933 | A | T | 1 | a0001c0001t0001g0109 | 1 | NA19091.hp1 | intron_variant | MODIFIER | c.686-31255A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14792933 | |||||||
| chrY:14793446 | C | A | 1 | a0001c0001t0002g0049 | 1 | NA19085.hp1 | intron_variant | MODIFIER | c.686-30742C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14793446 | |||||||
| chrY:14793802 | C | G | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.686-30386C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14793802 | |||||||
| chrY:14793990 | C | CA | 10 | a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0083 others(7): Show |
10 | HG00621.hp1 HG02145.hp1 HG02258.hp1 others(7): Show |
intron_variant | MODIFIER | c.686-30173dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14793990 | ||||||
| chrY:14793990 | CA | C | 11 | a0001c0001t0001g0007 a0001c0001t0001g0023 a0001c0001t0001g0032 others(8): Show |
11 | HG00280.hp1 HG00673.hp1 HG01074.hp1 others(8): Show |
intron_variant | MODIFIER | c.686-30173delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14793990 | ||||||
| chrY:14794255 | T | TA | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29931dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794255 | ||||||
| chrY:14794258 | T | A | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29930T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794258 | |||||||
| chrY:14794260 | C | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29928C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794260 | |||||||
| chrY:14794267 | TA | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29918delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794267 | ||||||
| chrY:14794287 | C | A | 1 | a0001c0001t0001g0004 | 1 | NA19004.hp1 | intron_variant | MODIFIER | c.686-29901C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794287 | |||||||
| chrY:14794312 | G | GA | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29873dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794312 | ||||||
| chrY:14794472 | GT | G | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29711delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794472 | ||||||
| chrY:14794531 | T | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-29657T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794531 | |||||||
| chrY:14794555 | TC | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29631delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794555 | ||||||
| chrY:14794750 | A | AG | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29438_686-2943 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794750 | |||||||
| chrY:14794753 | GT | G | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29431delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794753 | ||||||
| chrY:14794772 | C | CA | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29415dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794772 | ||||||
| chrY:14794803 | A | G | 43 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(40): Show |
43 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(40): Show |
intron_variant | MODIFIER | c.686-29385A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14794803 | |||||||
| chrY:14794855 | T | TG | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29332dupG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794855 | ||||||
| chrY:14794877 | TA | T | 1 | a0001c0001t0001g0012 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.686-29303delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14794877 | ||||||
| chrY:14795015 | C | T | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-29173C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14795015 | |||||||
| chrY:14795208 | A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-28980A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14795208 | |||||||
| chrY:14796082 | A | T | 4 | a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0002g0119 others(1): Show |
4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.686-28106A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796082 | |||||||
| chrY:14796544 | G | T | 1 | a0001c0001t0001g0001 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.686-27644G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796544 | |||||||
| chrY:14796571 | T | TA | 11 | a0001c0001t0001g0034 a0001c0001t0001g0057 a0001c0001t0001g0063 others(8): Show |
11 | HG01106.hp1 HG01255.hp1 HG01256.hp1 others(8): Show |
intron_variant | MODIFIER | c.686-27596dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796571 | ||||||
| chrY:14796571 | T | TAA | 1 | a0001c0001t0001g0030 | 1 | HG01069.hp1 | intron_variant | MODIFIER | c.686-27597_686-2759 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796571 | ||||||
| chrY:14796571 | T | TAAA | 1 | a0001c0001t0001g0038 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.686-27598_686-2759 others(7): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796571 | ||||||
| chrY:14796571 | TA | T | 2 | a0001c0001t0001g0076 a0001c0002t0001g0003 |
2 | HG04115.hp1 NA19063.hp1 |
intron_variant | MODIFIER | c.686-27596delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796571 | ||||||
| chrY:14796589 | A | G | 1 | a0001c0001t0001g0022 | 1 | HG02132.hp1 | intron_variant | MODIFIER | c.686-27599A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796589 | |||||||
| chrY:14796721 | G | C | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.686-27467G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796721 | |||||||
| chrY:14796783 | CAA | C | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-27403_686-2740 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14796783 | ||||||
| chrY:14796969 | T | A | 1 | a0001c0001t0001g0020 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.686-27219T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14796969 | |||||||
| chrY:14797298 | C | CT | 2 | a0001c0001t0001g0012 a0001c0001t0004g0114 |
2 | HG02647.hp1 NA19082.hp1 |
intron_variant | MODIFIER | c.686-26874dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14797298 | ||||||
| chrY:14797298 | CT | C | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.686-26874delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14797298 | ||||||
| chrY:14797364 | T | G | 1 | a0001c0001t0001g0034 | 1 | HG04204.hp1 | intron_variant | MODIFIER | c.686-26824T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14797364 | |||||||
| chrY:14797838 | T | C | 1 | a0001c0001t0001g0068 | 1 | HG02738.hp1 | intron_variant | MODIFIER | c.686-26350T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14797838 | |||||||
| chrY:14798209 | G | A | 2 | a0001c0001t0001g0034 a0001c0001t0001g0075 |
2 | HG02602.hp1 HG04204.hp1 |
intron_variant | MODIFIER | c.686-25979G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14798209 | |||||||
| chrY:14800584 | A | C | 6 | a0001c0001t0001g0023 a0001c0001t0001g0082 a0001c0001t0001g0115 others(3): Show |
6 | HG02572.hp1 HG03098.hp1 NA18971.hp1 others(3): Show |
intron_variant | MODIFIER | c.686-23604A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14800584 | |||||||
| chrY:14800843 | T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-23345T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14800843 | |||||||
| chrY:14801233 | G | A | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.686-22955G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14801233 | |||||||
| chrY:14801542 | C | CA | 2 | a0001c0001t0001g0076 a0001c0001t0002g0101 |
2 | HG04115.hp1 NA18994.hp1 |
intron_variant | MODIFIER | c.686-22625dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14801542 | ||||||
| chrY:14801542 | CA | C | 41 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(38): Show |
41 | HG01074.hp1 HG01106.hp1 HG01109.hp1 others(38): Show |
intron_variant | MODIFIER | c.686-22625delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14801542 | ||||||
| chrY:14801542 | CAA | C | 2 | a0001c0001t0001g0086 a0001c0001t0001g0089 |
2 | HG02895.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.686-22626_686-2262 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14801542 | ||||||
| chrY:14801562 | A | AG | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-22626_686-2262 others(5): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14801562 | |||||||
| chrY:14801562 | A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-22626A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14801562 | |||||||
| chrY:14801797 | C | T | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-22391C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14801797 | |||||||
| chrY:14802084 | TC | T | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.686-22101delC | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14802084 | ||||||
| chrY:14802522 | A | G | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-21666A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14802522 | |||||||
| chrY:14802672 | TTTTAAAT others(36): Show |
T | 97 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(94): Show |
97 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(94): Show |
intron_variant | MODIFIER | c.686-21505_686-2146 others(47): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14802672 | ||||||
| chrY:14803618 | T | G | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.686-20570T>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14803618 | |||||||
| chrY:14803921 | C | T | 1 | a0001c0001t0001g0056 | 1 | HG00642.hp1 | intron_variant | MODIFIER | c.686-20267C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14803921 | |||||||
| chrY:14804195 | CA | C | 1 | a0001c0001t0001g0013 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.686-19991delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14804195 | ||||||
| chrY:14804709 | C | A | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.686-19479C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14804709 | |||||||
| chrY:14806148 | A | G | 1 | a0001c0001t0002g0045 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.686-18040A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14806148 | |||||||
| chrY:14806233 | T | C | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-17955T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14806233 | |||||||
| chrY:14806837 | G | GA | 3 | a0001c0001t0001g0036 a0001c0001t0001g0112 a0001c0001t0002g0053 |
3 | HG00140.hp1 HG01167.hp1 HG02027.hp1 |
intron_variant | MODIFIER | c.686-17340dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14806837 | ||||||
| chrY:14806991 | A | T | 1 | a0001c0002t0001g0003 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.686-17197A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14806991 | |||||||
| chrY:14807416 | T | C | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.686-16772T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14807416 | |||||||
| chrY:14808712 | A | G | 1 | a0001c0001t0001g0117 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.686-15476A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14808712 | |||||||
| chrY:14809466 | C | CA | 1 | a0001c0001t0002g0024 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.686-14715dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14809466 | ||||||
| chrY:14809551 | AT | A | 1 | a0001c0001t0001g0009 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.686-14623delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14809551 | ||||||
| chrY:14809958 | C | A | 1 | a0001c0001t0002g0052 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.686-14230C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14809958 | |||||||
| chrY:14810903 | T | C | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.686-13285T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14810903 | |||||||
| chrY:14811790 | A | G | 2 | a0001c0001t0001g0032 a0001c0001t0001g0035 |
2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.686-12398A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14811790 | |||||||
| chrY:14812758 | T | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-11430T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14812758 | |||||||
| chrY:14812832 | CT | C | 1 | a0001c0001t0001g0116 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.686-11352delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14812832 | ||||||
| chrY:14812926 | TCTTC | T | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.686-11248_686-1124 others(8): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14812926 | ||||||
| chrY:14812935 | C | T | 1 | a0001c0001t0001g0121 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.686-11253C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14812935 | |||||||
| chrY:14812966 | C | T | 3 | a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 |
3 | HG01255.hp1 HG01256.hp1 HG01258.hp1 |
intron_variant | MODIFIER | c.686-11222C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14812966 | |||||||
| chrY:14813220 | C | T | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.686-10968C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14813220 | |||||||
| chrY:14813423 | G | A | 2 | a0001c0001t0001g0032 a0001c0001t0001g0035 |
2 | HG01074.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.686-10765G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14813423 | |||||||
| chrY:14813829 | T | C | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.686-10359T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14813829 | |||||||
| chrY:14814004 | A | C | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.686-10184A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14814004 | |||||||
| chrY:14814358 | C | A | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.686-9830C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14814358 | |||||||
| chrY:14814373 | G | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.686-9815G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14814373 | |||||||
| chrY:14814427 | A | G | 1 | a0001c0001t0001g0112 | 1 | HG01167.hp1 | intron_variant | MODIFIER | c.686-9761A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14814427 | |||||||
| chrY:14815202 | A | T | 12 | a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 others(9): Show |
12 | HG02055.hp1 HG02145.hp1 HG02258.hp1 others(9): Show |
intron_variant | MODIFIER | c.686-8986A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14815202 | |||||||
| chrY:14815946 | T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-8242T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14815946 | |||||||
| chrY:14816587 | G | T | 1 | a0001c0001t0001g0071 | 1 | HG01515.hp1 | intron_variant | MODIFIER | c.686-7601G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14816587 | |||||||
| chrY:14816865 | A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.686-7323A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14816865 | |||||||
| chrY:14817390 | C | T | 3 | a0001c0001t0001g0028 a0001c0001t0001g0031 a0001c0001t0001g0037 |
3 | HG01099.hp1 HG03579.hp1 HG03710.hp1 |
intron_variant | MODIFIER | c.686-6798C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14817390 | |||||||
| chrY:14817887 | C | G | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.686-6301C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14817887 | |||||||
| chrY:14817956 | G | A | 1 | a0001c0001t0002g0050 | 1 | HG00621.hp1 | intron_variant | MODIFIER | c.686-6232G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14817956 | |||||||
| chrY:14818067 | C | A | 15 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(12): Show |
15 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(12): Show |
intron_variant | MODIFIER | c.686-6121C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14818067 | |||||||
| chrY:14818150 | G | A | 2 | a0001c0001t0001g0082 a0001c0001t0001g0117 |
2 | HG02572.hp1 HG03098.hp1 |
intron_variant | MODIFIER | c.686-6038G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14818150 | |||||||
| chrY:14818962 | T | C | 1 | a0001c0001t0001g0031 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.686-5226T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14818962 | |||||||
| chrY:14819640 | T | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-4548T>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14819640 | |||||||
| chrY:14820055 | C | T | 1 | a0001c0001t0002g0045 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.686-4133C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14820055 | |||||||
| chrY:14820301 | C | T | 5 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0115 others(2): Show |
5 | NA18612.hp1 NA18971.hp1 NA18974.hp1 others(2): Show |
intron_variant | MODIFIER | c.686-3887C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14820301 | |||||||
| chrY:14820835 | G | C | 1 | a0001c0001t0002g0078 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.686-3353G>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14820835 | |||||||
| chrY:14821435 | C | G | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.686-2753C>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14821435 | |||||||
| chrY:14822051 | G | T | 7 | a0001c0001t0001g0034 a0001c0001t0001g0054 a0001c0001t0001g0066 others(4): Show |
7 | HG02602.hp1 HG02738.hp1 HG03490.hp1 others(4): Show |
intron_variant | MODIFIER | c.686-2137G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14822051 | |||||||
| chrY:14822724 | G | A | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.686-1464G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14822724 | |||||||
| chrY:14823021 | G | GA | 2 | a0001c0001t0001g0109 a0001c0001t0001g0111 |
2 | NA18612.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.686-1157dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chrY | 14823021 | ||||||
| chrY:14823496 | AG | A | 3 | a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0090 |
3 | HG02055.hp1 HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.686-691delG | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 4/6 | chrY | 14823496 | |||||||
| chrY:14825285 | CTCTG | C | 3 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0057 |
3 | HG01074.hp1 HG01106.hp1 HG01109.hp1 |
intron_variant | MODIFIER | c.871+916_871+919del others(4): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14825285 | ||||||
| chrY:14825672 | ACACTTTT others(19): Show |
A | 5 | a0001c0001t0001g0030 a0001c0001t0001g0038 a0001c0001t0001g0063 others(2): Show |
5 | HG01069.hp1 HG01255.hp1 HG01256.hp1 others(2): Show |
intron_variant | MODIFIER | c.871+1300_871+1325d others(28): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14825672 | |||||||
| chrY:14825693 | C | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.871+1320C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14825693 | |||||||
| chrY:14826013 | G | A | 18 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(15): Show |
18 | NA18940.hp1 NA18944.hp1 NA18948.hp1 others(15): Show |
intron_variant | MODIFIER | c.871+1640G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826013 | |||||||
| chrY:14826024 | A | G | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.871+1651A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826024 | |||||||
| chrY:14826338 | C | CT | 5 | a0001c0001t0001g0002 a0001c0001t0001g0084 a0001c0001t0001g0085 others(2): Show |
5 | HG02486.hp1 HG02965.hp1 HG03139.hp1 others(2): Show |
intron_variant | MODIFIER | c.871+1984dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14826338 | ||||||
| chrY:14826338 | C | CTTTT | 2 | a0001c0001t0001g0115 a0001c0001t0001g0116 |
2 | NA18971.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.871+1981_871+1984d others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14826338 | ||||||
| chrY:14826338 | CT | C | 8 | a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0023 others(5): Show |
8 | HG01099.hp1 HG02647.hp1 HG03225.hp1 others(5): Show |
intron_variant | MODIFIER | c.871+1984delT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14826338 | ||||||
| chrY:14826343 | T | C | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.871+1970T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826343 | |||||||
| chrY:14826455 | G | A | 1 | a0001c0001t0002g0052 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.871+2082G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826455 | |||||||
| chrY:14826932 | A | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.871+2559A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14826932 | |||||||
| chrY:14827526 | C | A | 103 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(100): Show |
103 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(100): Show |
intron_variant | MODIFIER | c.872-2204C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14827526 | |||||||
| chrY:14827914 | A | T | 2 | a0001c0001t0001g0036 a0001c0001t0001g0112 |
2 | HG00140.hp1 HG01167.hp1 |
intron_variant | MODIFIER | c.872-1816A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14827914 | |||||||
| chrY:14827936 | A | G | 1 | a0001c0001t0001g0080 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.872-1794A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14827936 | |||||||
| chrY:14828244 | A | G | 4 | a0001c0001t0002g0027 a0001c0001t0002g0045 a0001c0001t0002g0119 others(1): Show |
4 | HG00673.hp1 HG02071.hp1 HG02129.hp1 others(1): Show |
intron_variant | MODIFIER | c.872-1486A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14828244 | |||||||
| chrY:14828358 | C | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.872-1372C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14828358 | |||||||
| chrY:14828416 | C | T | 1 | a0001c0001t0001g0113 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.872-1314C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14828416 | |||||||
| chrY:14829017 | T | TA | 1 | a0001c0001t0002g0119 | 1 | HG02135.hp1 | intron_variant | MODIFIER | c.872-702dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14829017 | ||||||
| chrY:14829023 | A | C | 3 | a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0092 |
3 | HG01074.hp1 HG01109.hp1 HG03130.hp1 |
intron_variant | MODIFIER | c.872-707A>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14829023 | |||||||
| chrY:14829056 | A | T | 2 | a0001c0001t0001g0007 a0001c0001t0001g0018 |
2 | NA18940.hp1 NA19056.hp1 |
intron_variant | MODIFIER | c.872-674A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | chrY | 14829056 | |||||||
| chrY:14829508 | C | CGT | 23 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(20): Show |
23 | HG00280.hp1 HG02647.hp1 NA18747.hp1 others(20): Show |
intron_variant | MODIFIER | c.872-201_872-200dup others(2): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chrY | 14829508 | ||||||
| chrY:14830531 | T | C | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.1661+12T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14830531 | |||||||
| chrY:14830684 | A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.1661+165A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14830684 | |||||||
| chrY:14832173 | C | T | 103 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(100): Show |
103 | HG00140.hp1 HG00280.hp1 HG00609.hp1 others(100): Show |
intron_variant | MODIFIER | c.1661+1654C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14832173 | |||||||
| chrY:14832823 | C | T | 2 | a0001c0001t0001g0054 a0001c0001t0001g0066 |
2 | HG03490.hp1 HG03492.hp1 |
intron_variant | MODIFIER | c.1661+2304C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14832823 | |||||||
| chrY:14833093 | G | A | 1 | a0001c0001t0001g0108 | 1 | HG03654.hp1 | intron_variant | MODIFIER | c.1661+2574G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14833093 | |||||||
| chrY:14833622 | C | T | 1 | a0001c0001t0001g0081 | 1 | NA18747.hp1 | intron_variant | MODIFIER | c.1661+3103C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14833622 | |||||||
| chrY:14833993 | A | G | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.1661+3474A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14833993 | |||||||
| chrY:14834003 | T | TA | 2 | a0001c0001t0001g0092 a0001c0001t0002g0033 |
2 | HG02015.hp1 HG03130.hp1 |
intron_variant | MODIFIER | c.1661+3499dupA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14834003 | ||||||
| chrY:14834003 | TA | T | 2 | a0001c0001t0001g0002 a0001c0001t0001g0058 |
2 | HG01943.hp1 NA20905.hp1 |
intron_variant | MODIFIER | c.1661+3499delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14834003 | ||||||
| chrY:14834014 | A | G | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.1661+3495A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834014 | |||||||
| chrY:14834104 | T | C | 1 | a0001c0001t0001g0019 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.1661+3585T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834104 | |||||||
| chrY:14834133 | C | T | 1 | a0001c0001t0001g0002 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.1661+3614C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834133 | |||||||
| chrY:14834156 | C | T | 3 | a0001c0001t0001g0109 a0001c0001t0001g0111 a0002c0003t0001g0110 |
3 | NA18612.hp1 NA19079.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.1661+3637C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834156 | |||||||
| chrY:14834646 | G | A | 2 | a0001c0001t0002g0046 a0001c0001t0002g0047 |
2 | HG00609.hp1 NA18982.hp1 |
intron_variant | MODIFIER | c.1661+4127G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14834646 | |||||||
| chrY:14835021 | A | G | 1 | a0001c0001t0004g0114 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.1661+4502A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14835021 | |||||||
| chrY:14835793 | G | T | 1 | a0001c0001t0001g0085 | 1 | HG03139.hp1 | intron_variant | MODIFIER | c.1662-4620G>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14835793 | |||||||
| chrY:14836483 | C | CT | 1 | a0001c0001t0002g0102 | 1 | NA19000.hp1 | intron_variant | MODIFIER | c.1662-3916dupT | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14836483 | ||||||
| chrY:14836978 | C | A | 1 | a0001c0001t0002g0047 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.1662-3435C>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14836978 | |||||||
| chrY:14836979 | A | T | 1 | a0001c0001t0002g0047 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.1662-3434A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14836979 | |||||||
| chrY:14837047 | A | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.1662-3366A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14837047 | |||||||
| chrY:14837079 | GA | G | 1 | a0001c0001t0001g0016 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.1662-3328delA | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14837079 | ||||||
| chrY:14837516 | A | T | 1 | a0001c0001t0005g0077 | 1 | HG03225.hp1 | intron_variant | MODIFIER | c.1662-2897A>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14837516 | |||||||
| chrY:14837673 | T | C | 1 | a0001c0001t0001g0042 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.1662-2740T>C | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14837673 | |||||||
| chrY:14838223 | TAG | T | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.1662-2188_1662-218 others(6): Show |
NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chrY | 14838223 | ||||||
| chrY:14838227 | C | T | 2 | a0001c0001t0003g0025 a0001c0001t0003g0026 |
2 | HG02083.hp1 NA19009.hp1 |
intron_variant | MODIFIER | c.1662-2186C>T | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14838227 | |||||||
| chrY:14839562 | G | A | 1 | a0001c0001t0001g0023 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.1662-851G>A | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14839562 | |||||||
| chrY:14839995 | A | G | 15 | a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 others(12): Show |
15 | NA18943.hp1 NA18953.hp1 NA18962.hp1 others(12): Show |
intron_variant | MODIFIER | c.1662-418A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14839995 | |||||||
| chrY:14840059 | A | G | 1 | a0001c0001t0002g0040 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.1662-354A>G | NLGN4Y | ENSG00000165246.15 | transcript | ENST00000684976.1 | protein_coding | 6/6 | chrY | 14840059 |