Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

Item	Value
geneid	6756
ensemblid	ENSG00000126752.8
hgncid	11335
symbol	SSX1
name	SSX family member 1
refseq_nuc	NM_005635.4
refseq_prot	NP_005626.1
ensembl_nuc	ENST00000376919.4
ensembl_prot	ENSP00000366118.3
mane_status	MANE Select
chr	chrX
start	48255392
end	48267444
strand	+
ver	v1.2
region	chrX:48255392-48267444
region5000	chrX:48250392-48272444
regionname0	SSX1_chrX_48255392_48267444
regionname5000	SSX1_chrX_48250392_48272444

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	188	317	62	50	157	13	33	124	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0002	0/0	188	13	13	0	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0003	0/0	188	2	0	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0004	0/0	188	2	0	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0005	0/0	188	2	0	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0006	0/0	188	1	1	0	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0007	0/0	179	1	0	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0008	0/0	148	1	0	0	1	0	0	1	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	567	167	21	27	94	6	19	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
c0002	1/1	567	150	41	23	63	7	14	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
c0003	0/0	567	13	13	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
c0004	0/0	567	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
c0005	0/0	567	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
c0006	0/0	567	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
c0007	0/0	540	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
c0008	0/0	568	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
c0009	0/0	567	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	657	149	40	25	62	7	13	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0002	0/0	672	91	5	18	52	6	10	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0003	0/0	657	63	7	12	34	0	10	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0004	0/0	655	12	12	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0005	0/0	672	10	7	0	3	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0006	0/0	657	3	0	0	3	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0007	0/0	655	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0008	0/0	656	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0009	0/0	672	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0010	0/0	672	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0011	0/0	675	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0012	0/0	674	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0013	0/0	672	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0014	0/0	659	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
t0015	0/0	657	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	41	13	5	18	1	4	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0002	0/0	33	1	7	17	4	4	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0003	0/0	29	0	7	18	0	4	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0004	0/0	13	0	3	10	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0005	0/0	9	0	0	9	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0006	0/0	8	0	0	8	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0007	0/0	8	0	1	7	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0008	1/0	6	4	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0009	0/0	6	0	3	0	3	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0010	0/0	5	5	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0011	0/0	5	4	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0012	0/0	5	1	1	2	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0013	0/0	5	1	2	1	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0014	0/0	4	4	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0015	0/0	4	4	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0016	0/0	4	0	3	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0017	0/0	4	3	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0018	0/1	4	0	2	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0019	0/0	4	0	1	2	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0020	0/0	4	0	0	2	0	2	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0021	0/0	3	0	1	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0022	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0023	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0024	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0025	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0026	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0027	0/0	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0028	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0029	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0030	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0031	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0032	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0033	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0034	0/0	2	0	0	1	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0035	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0036	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0037	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0038	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0039	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0040	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0041	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0042	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0043	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0044	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0045	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0046	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0047	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0048	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0049	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0050	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0051	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0052	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0053	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0054	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0055	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0056	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0057	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0058	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0059	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0060	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0061	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0062	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0063	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0064	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0065	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0066	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0067	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0068	0/0	1	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0069	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0070	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0071	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0072	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0073	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0074	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0075	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0076	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0077	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0078	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0079	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0080	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0081	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0082	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0083	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0084	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0085	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0086	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0087	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0088	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0089	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0090	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0091	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0092	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0093	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0094	0/0	1	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0095	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0096	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0097	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0098	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0099	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0100	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0101	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0102	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0103	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0104	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0105	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0106	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0107	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0108	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0109	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0110	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0111	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0112	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0113	0/0	1	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0114	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0115	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0116	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0117	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0118	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0119	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0120	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0121	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0122	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0123	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0124	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0125	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0126	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0127	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0128	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0129	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0130	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0131	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0132	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0133	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0134	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0135	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0136	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0137	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0138	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0139	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0140	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
g0141	0/0	1	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	567	167	21	27	94	6	19	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0002	1/1	567	150	41	23	63	7	14	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0002c0003	0/0	567	13	13	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0003c0006	0/0	567	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0004c0004	0/0	567	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0005c0005	0/0	567	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0006c0009	0/0	567	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0007c0007	0/0	540	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0008c0008	0/0	568	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1223	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0001t0002	0/0	1238	89	5	16	52	6	10	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0001t0003	0/0	1223	60	7	10	34	0	9	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0001t0005	0/0	1238	10	7	0	3	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0001t0006	0/0	1223	3	0	0	3	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0001t0010	0/0	1238	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0001t0011	0/0	1241	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0001t0012	0/0	1240	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0001t0013	0/0	1238	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0002t0001	1/1	1223	146	39	23	62	7	13	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0002t0008	0/0	1222	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0002t0014	0/0	1225	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0001c0002t0015	0/0	1223	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0002c0003t0004	0/0	1221	11	11	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0002c0003t0007	0/0	1221	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0003c0006t0003	0/0	1223	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0004c0004t0002	0/0	1238	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0005c0005t0001	0/0	1223	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0006c0009t0004	0/0	1221	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0007c0007t0003	0/0	1196	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444
a0008c0008t0009	0/0	1239	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	copy fasta	chrX	48250392	48272444

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0037	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0002	0/0	31	1	6	16	4	4	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0004	0/0	11	0	3	8	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0006	0/0	7	0	0	7	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0014	0/0	4	4	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0016	0/0	3	0	2	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0024	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0025	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0036	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0041	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0042	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0043	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0044	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0048	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0055	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0056	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0057	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0058	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0059	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0061	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0062	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0063	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0064	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0065	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0066	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0067	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0068	0/0	1	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0069	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0071	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0072	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0073	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0074	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0075	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0126	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0128	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0002g0141	0/0	1	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0003	0/0	25	0	6	15	0	4	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0011	0/0	5	4	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0020	0/0	4	0	0	2	0	2	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0026	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0027	0/0	2	0	2	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0028	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0033	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0034	0/0	2	0	0	1	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0038	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0039	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0077	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0078	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0079	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0080	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0081	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0082	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0083	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0084	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0085	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0086	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0087	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0117	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0119	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0003g0122	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0005g0002	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0005g0006	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0005g0010	0/0	5	5	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0005g0060	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0005g0124	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0005g0129	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0006g0003	0/0	3	0	0	3	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0010g0127	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0011g0004	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0012g0004	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0001t0013g0070	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0001	0/0	40	13	4	18	1	4	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0005	0/0	9	0	0	9	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0007	0/0	8	0	1	7	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0008	1/0	6	4	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0009	0/0	6	0	3	0	3	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0012	0/0	5	1	1	2	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0013	0/0	5	1	2	1	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0017	0/0	3	3	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0018	0/1	4	0	2	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0019	0/0	4	0	1	2	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0021	0/0	3	0	1	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0029	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0031	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0032	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0035	0/0	2	0	0	2	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0045	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0046	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0047	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0049	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0088	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0089	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0091	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0092	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0093	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0094	0/0	1	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0095	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0096	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0097	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0098	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0099	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0100	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0101	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0102	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0103	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0104	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0105	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0106	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0107	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0108	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0109	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0110	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0111	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0112	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0113	0/0	1	0	0	0	1	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0114	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0116	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0120	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0121	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0123	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0130	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0131	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0132	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0133	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0134	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0135	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0136	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0137	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0138	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0139	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0001g0140	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0008g0030	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0014g0090	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0001c0002t0015g0115	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0004g0015	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0004g0022	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0004g0023	0/0	2	2	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0004g0040	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0004g0050	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0004g0051	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0004g0052	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0004g0053	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0007g0015	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0002c0003t0007g0054	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0003c0006t0003g0003	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0003c0006t0003g0076	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0004c0004t0002g0002	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0004c0004t0002g0016	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0005c0005t0001g0001	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0005c0005t0001g0017	0/0	1	0	1	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0006c0009t0004g0015	0/0	1	1	0	0	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0007c0007t0003g0118	0/0	1	0	0	0	0	1	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
a0008c0008t0009g0125	0/0	1	0	0	1	0	0	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0002	g0002	EUR	GBR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00099	hp2	a0001	c0001	t0002	g0002	EUR	GBR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00140	hp1	a0001	c0002	t0001	g0018	EUR	GBR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00280	hp1	a0001	c0002	t0001	g0009	EUR	FIN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00323	hp1	a0001	c0001	t0002	g0068	EUR	FIN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00323	hp2	a0001	c0002	t0001	g0113	EUR	FIN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00408	hp1	a0001	c0002	t0001	g0005	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00408	hp2	a0001	c0001	t0003	g0079	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00423	hp1	a0001	c0001	t0003	g0003	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00423	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00438	hp1	a0001	c0001	t0003	g0020	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00438	hp2	a0001	c0002	t0001	g0012	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00544	hp1	a0001	c0002	t0001	g0007	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00544	hp2	a0001	c0002	t0001	g0021	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00558	hp1	a0001	c0002	t0001	g0005	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00558	hp2	a0001	c0001	t0002	g0004	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00597	hp1	a0001	c0001	t0006	g0003	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00597	hp2	a0001	c0002	t0001	g0005	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00609	hp1	a0001	c0001	t0002	g0006	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00621	hp1	a0001	c0001	t0002	g0069	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00642	hp1	a0001	c0002	t0001	g0009	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00673	hp1	a0001	c0002	t0001	g0013	EAS	CHS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00738	hp1	a0001	c0001	t0013	g0070	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00741	hp1	a0001	c0002	t0001	g0135	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG00741	hp2	a0001	c0002	t0001	g0132	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01069	hp1	a0001	c0001	t0003	g0027	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01070	hp1	a0001	c0001	t0002	g0071	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01070	hp2	a0001	c0002	t0001	g0104	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01071	hp1	a0001	c0001	t0002	g0073	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01071	hp2	a0001	c0001	t0003	g0027	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01074	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01081	hp1	a0001	c0002	t0001	g0001	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01081	hp2	a0001	c0002	t0001	g0009	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01099	hp1	a0001	c0002	t0001	g0001	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01106	hp1	a0001	c0002	t0001	g0013	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01109	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01167	hp1	a0005	c0005	t0001	g0017	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01168	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01168	hp2	a0001	c0002	t0001	g0018	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01169	hp1	a0005	c0005	t0001	g0001	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01169	hp2	a0001	c0001	t0002	g0055	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01175	hp1	a0001	c0002	t0001	g0009	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01175	hp2	a0001	c0002	t0001	g0012	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01192	hp1	a0004	c0004	t0002	g0016	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01243	hp1	a0001	c0002	t0001	g0008	AMR	PUR	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01255	hp1	a0001	c0001	t0002	g0044	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01256	hp1	a0001	c0001	t0002	g0004	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01257	hp1	a0003	c0006	t0003	g0003	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01257	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01258	hp1	a0003	c0006	t0003	g0076	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01261	hp1	a0001	c0001	t0003	g0077	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01346	hp1	a0001	c0002	t0001	g0001	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01346	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01358	hp1	a0001	c0002	t0001	g0121	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01361	hp1	a0001	c0002	t0001	g0019	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01361	hp2	a0001	c0002	t0001	g0140	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01433	hp1	a0004	c0004	t0002	g0002	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01515	hp1	a0001	c0002	t0001	g0009	EUR	IBS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01516	hp1	a0001	c0001	t0002	g0002	EUR	IBS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01516	hp2	a0001	c0002	t0001	g0094	EUR	IBS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01517	hp1	a0001	c0001	t0002	g0002	EUR	IBS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01517	hp2	a0001	c0002	t0001	g0009	EUR	IBS	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01884	hp1	a0001	c0002	t0001	g0088	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01884	hp2	a0001	c0001	t0005	g0060	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01891	hp1	a0001	c0002	t0001	g0001	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01891	hp2	a0002	c0003	t0004	g0052	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01928	hp1	a0001	c0002	t0001	g0131	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01934	hp1	a0001	c0002	t0001	g0046	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01943	hp1	a0001	c0002	t0001	g0021	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01952	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01975	hp1	a0001	c0001	t0002	g0016	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01975	hp2	a0001	c0001	t0003	g0003	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01978	hp1	a0001	c0001	t0002	g0074	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01978	hp2	a0001	c0001	t0003	g0003	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01981	hp1	a0001	c0001	t0003	g0085	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01981	hp2	a0001	c0002	t0001	g0001	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01993	hp1	a0001	c0001	t0002	g0004	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01993	hp2	a0001	c0001	t0003	g0003	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02004	hp1	a0001	c0001	t0003	g0003	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02004	hp2	a0001	c0001	t0002	g0004	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02015	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02027	hp1	a0001	c0002	t0001	g0098	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02040	hp1	a0001	c0001	t0003	g0084	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02055	hp1	a0001	c0001	t0003	g0081	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02056	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02071	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02074	hp1	a0001	c0002	t0001	g0021	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02080	hp1	a0001	c0001	t0005	g0006	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02080	hp2	a0001	c0002	t0001	g0001	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02083	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02129	hp1	a0001	c0002	t0001	g0001	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02132	hp1	a0001	c0002	t0001	g0007	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02135	hp1	a0001	c0001	t0003	g0083	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02145	hp1	a0001	c0002	t0001	g0120	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02155	hp1	a0001	c0001	t0003	g0011	EAS	CDX	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02155	hp2	a0001	c0002	t0001	g0019	EAS	CDX	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02257	hp1	a0001	c0002	t0001	g0029	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02257	hp2	a0001	c0002	t0001	g0091	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02258	hp1	a0002	c0003	t0004	g0051	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02273	hp1	a0001	c0002	t0001	g0007	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02273	hp2	a0001	c0001	t0003	g0003	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02280	hp1	a0001	c0002	t0001	g0031	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02280	hp2	a0001	c0002	t0001	g0017	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02293	hp1	a0001	c0002	t0001	g0013	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02293	hp2	a0001	c0001	t0003	g0003	AMR	PEL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02451	hp1	a0002	c0003	t0007	g0015	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02451	hp2	a0001	c0002	t0001	g0045	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02523	hp1	a0001	c0001	t0006	g0003	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02523	hp2	a0001	c0002	t0001	g0007	EAS	KHV	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02572	hp1	a0001	c0001	t0010	g0127	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02602	hp1	a0001	c0002	t0001	g0137	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02615	hp1	a0001	c0002	t0001	g0008	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02615	hp2	a0002	c0003	t0004	g0040	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02622	hp1	a0002	c0003	t0007	g0054	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02622	hp2	a0002	c0003	t0004	g0023	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02630	hp1	a0001	c0002	t0001	g0008	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02630	hp2	a0001	c0002	t0001	g0031	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02647	hp1	a0002	c0003	t0004	g0050	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02683	hp1	a0001	c0002	t0001	g0012	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02683	hp2	a0001	c0001	t0002	g0002	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02698	hp1	a0001	c0001	t0002	g0065	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02717	hp1	a0001	c0002	t0001	g0001	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02723	hp1	a0001	c0001	t0003	g0011	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02723	hp2	a0001	c0002	t0001	g0001	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02735	hp1	a0001	c0002	t0001	g0001	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02738	hp1	a0001	c0002	t0001	g0133	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02809	hp1	a0001	c0002	t0001	g0101	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02809	hp2	a0001	c0001	t0005	g0124	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02818	hp1	a0001	c0001	t0003	g0087	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02818	hp2	a0001	c0002	t0001	g0110	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02886	hp1	a0001	c0002	t0001	g0017	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02886	hp2	a0001	c0001	t0005	g0010	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02895	hp1	a0001	c0002	t0001	g0017	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02896	hp1	a0001	c0002	t0001	g0001	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02896	hp2	a0001	c0002	t0008	g0030	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02897	hp1	a0001	c0002	t0008	g0030	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02897	hp2	a0001	c0002	t0001	g0001	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02965	hp1	a0001	c0002	t0001	g0001	AFR	ESN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02970	hp1	a0001	c0002	t0001	g0097	AFR	ESN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02970	hp2	a0002	c0003	t0004	g0015	AFR	ESN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03017	hp1	a0001	c0002	t0001	g0001	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03041	hp1	a0001	c0002	t0001	g0095	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03041	hp2	a0001	c0001	t0003	g0011	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03098	hp1	a0001	c0001	t0003	g0011	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03130	hp1	a0001	c0002	t0001	g0001	AFR	ESN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03139	hp1	a0001	c0001	t0003	g0080	AFR	ESN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03195	hp1	a0001	c0001	t0003	g0011	AFR	ESN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03195	hp2	a0001	c0002	t0001	g0001	AFR	ESN	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03209	hp1	a0002	c0003	t0004	g0015	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03225	hp1	a0001	c0002	t0001	g0001	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03239	hp1	a0001	c0001	t0002	g0059	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03239	hp2	a0001	c0002	t0001	g0106	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03453	hp1	a0001	c0002	t0001	g0001	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03453	hp2	a0001	c0002	t0001	g0001	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03486	hp1	a0001	c0001	t0002	g0014	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03486	hp2	a0006	c0009	t0004	g0015	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03490	hp1	a0001	c0001	t0002	g0062	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03491	hp1	a0001	c0002	t0001	g0001	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03491	hp2	a0001	c0001	t0003	g0003	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03492	hp1	a0001	c0001	t0003	g0003	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03540	hp1	a0001	c0002	t0001	g0001	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03540	hp2	a0001	c0001	t0005	g0010	AFR	GWD	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03579	hp1	a0001	c0002	t0001	g0105	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03654	hp1	a0001	c0002	t0001	g0103	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03669	hp1	a0001	c0002	t0001	g0001	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03669	hp2	a0001	c0001	t0003	g0003	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03688	hp1	a0001	c0001	t0003	g0034	SAS	STU	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03704	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03704	hp2	a0001	c0001	t0002	g0063	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03710	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03831	hp1	a0001	c0001	t0003	g0003	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03831	hp2	a0001	c0002	t0001	g0013	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03834	hp1	a0001	c0002	t0001	g0096	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03834	hp2	a0001	c0001	t0003	g0020	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03927	hp1	a0001	c0001	t0003	g0020	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03927	hp2	a0001	c0001	t0002	g0041	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03942	hp1	a0001	c0001	t0002	g0058	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG04115	hp1	a0007	c0007	t0003	g0118	SAS	STU	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG04184	hp1	a0001	c0002	t0001	g0019	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG04184	hp2	a0001	c0002	t0001	g0109	SAS	BEB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG04199	hp1	a0001	c0002	t0014	g0090	SAS	STU	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG04204	hp1	a0001	c0001	t0003	g0082	SAS	STU	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG04228	hp1	a0001	c0001	t0003	g0078	SAS	STU	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18522	hp1	a0001	c0002	t0001	g0008	AFR	YRI	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18612	hp1	a0001	c0002	t0001	g0001	EAS	CHB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18747	hp1	a0001	c0002	t0001	g0007	EAS	CHB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18906	hp1	a0002	c0003	t0004	g0022	AFR	YRI	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18906	hp2	a0001	c0002	t0001	g0112	AFR	YRI	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18940	hp1	a0001	c0002	t0001	g0134	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18941	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18941	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18942	hp1	a0001	c0001	t0002	g0061	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18942	hp2	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18943	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18944	hp1	a0001	c0002	t0001	g0007	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18945	hp1	a0001	c0001	t0002	g0064	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18948	hp1	a0001	c0001	t0003	g0026	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18949	hp1	a0001	c0002	t0001	g0032	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18949	hp2	a0001	c0002	t0001	g0007	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18950	hp1	a0001	c0001	t0002	g0048	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18950	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18952	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18953	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18954	hp1	a0001	c0002	t0001	g0099	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18954	hp2	a0001	c0001	t0002	g0006	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18956	hp1	a0001	c0001	t0003	g0039	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18956	hp2	a0001	c0002	t0001	g0139	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18957	hp1	a0001	c0001	t0003	g0117	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18957	hp2	a0001	c0002	t0001	g0012	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18959	hp1	a0001	c0001	t0002	g0043	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18960	hp1	a0001	c0001	t0012	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18961	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18962	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18963	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18963	hp2	a0001	c0001	t0002	g0128	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18964	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18964	hp2	a0001	c0002	t0015	g0115	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18965	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18966	hp1	a0001	c0001	t0002	g0006	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18967	hp1	a0001	c0002	t0001	g0111	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18968	hp1	a0001	c0001	t0003	g0122	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18968	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18969	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18969	hp2	a0001	c0001	t0002	g0006	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18970	hp1	a0001	c0002	t0001	g0005	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18971	hp1	a0001	c0002	t0001	g0019	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18972	hp1	a0001	c0001	t0003	g0034	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18972	hp2	a0001	c0002	t0001	g0130	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18973	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18973	hp2	a0001	c0002	t0001	g0107	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18974	hp1	a0001	c0002	t0001	g0049	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18975	hp1	a0001	c0002	t0001	g0005	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18975	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18977	hp1	a0001	c0001	t0002	g0057	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18979	hp1	a0001	c0002	t0001	g0116	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18979	hp2	a0001	c0001	t0002	g0072	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18980	hp1	a0001	c0001	t0002	g0006	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18980	hp2	a0001	c0002	t0001	g0005	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18981	hp1	a0001	c0002	t0001	g0035	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18981	hp2	a0001	c0001	t0003	g0028	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18982	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18983	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18984	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18985	hp1	a0001	c0002	t0001	g0108	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18986	hp1	a0001	c0002	t0001	g0005	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18987	hp1	a0001	c0001	t0002	g0036	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18987	hp2	a0001	c0001	t0003	g0026	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18988	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18989	hp1	a0001	c0001	t0003	g0119	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18990	hp1	a0001	c0001	t0005	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18992	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18992	hp2	a0001	c0002	t0001	g0123	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18994	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18995	hp1	a0001	c0001	t0002	g0016	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18997	hp1	a0001	c0001	t0002	g0025	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18997	hp2	a0001	c0002	t0001	g0092	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18998	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18998	hp2	a0001	c0001	t0003	g0086	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18999	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18999	hp2	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19000	hp1	a0001	c0001	t0003	g0028	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19002	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19002	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19003	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19003	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19004	hp1	a0001	c0001	t0002	g0006	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19005	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19006	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19007	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19009	hp1	a0001	c0001	t0002	g0066	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19010	hp1	a0001	c0002	t0001	g0035	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19010	hp2	a0001	c0001	t0002	g0036	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19012	hp1	a0001	c0002	t0001	g0100	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19030	hp1	a0001	c0002	t0001	g0138	AFR	LWK	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19030	hp2	a0001	c0001	t0002	g0014	AFR	LWK	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19043	hp1	a0002	c0003	t0004	g0023	AFR	LWK	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19054	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19054	hp2	a0001	c0001	t0011	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19055	hp1	a0008	c0008	t0009	g0125	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19056	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19058	hp1	a0001	c0001	t0003	g0033	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19060	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19062	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19063	hp1	a0001	c0001	t0002	g0056	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19064	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19064	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19065	hp1	a0001	c0002	t0001	g0005	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19065	hp2	a0001	c0001	t0002	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19066	hp1	a0001	c0002	t0001	g0001	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19067	hp1	a0001	c0001	t0003	g0020	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19068	hp1	a0001	c0002	t0001	g0005	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19070	hp1	a0001	c0001	t0002	g0006	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19072	hp1	a0001	c0001	t0002	g0042	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19074	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19074	hp2	a0001	c0002	t0001	g0047	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19075	hp1	a0001	c0002	t0001	g0136	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19076	hp1	a0001	c0001	t0005	g0129	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19077	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19077	hp2	a0001	c0001	t0003	g0033	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19078	hp1	a0001	c0001	t0002	g0075	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19078	hp2	a0001	c0002	t0001	g0032	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19079	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19081	hp1	a0001	c0002	t0001	g0007	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19081	hp2	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19082	hp1	a0001	c0002	t0001	g0114	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19083	hp1	a0001	c0001	t0003	g0038	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19085	hp1	a0001	c0001	t0002	g0004	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19086	hp1	a0001	c0001	t0002	g0126	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19087	hp1	a0001	c0001	t0002	g0024	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19087	hp2	a0001	c0002	t0001	g0089	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19088	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19089	hp1	a0001	c0001	t0002	g0024	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19090	hp1	a0001	c0001	t0006	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19090	hp2	a0001	c0001	t0002	g0025	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19091	hp1	a0001	c0001	t0002	g0067	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19240	hp1	a0002	c0003	t0004	g0053	AFR	YRI	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA19240	hp2	a0001	c0002	t0001	g0012	AFR	YRI	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA20129	hp1	a0001	c0001	t0002	g0002	AFR	ASW	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA20129	hp2	a0001	c0001	t0005	g0010	AFR	ASW	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA20752	hp1	a0001	c0001	t0002	g0141	EUR	TSI	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA20805	hp1	a0001	c0002	t0001	g0001	EUR	TSI	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA20905	hp1	a0001	c0001	t0002	g0002	SAS	GIH	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01123	hp1	a0001	c0001	t0002	g0016	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG01123	hp2	a0001	c0002	t0001	g0018	AMR	CLM	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02109	hp1	a0001	c0001	t0002	g0014	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02109	hp2	a0001	c0002	t0001	g0008	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02486	hp1	a0001	c0001	t0005	g0010	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02559	hp1	a0001	c0001	t0002	g0014	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG02559	hp2	a0001	c0002	t0001	g0029	AFR	ACB	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG03471	hp1	a0001	c0001	t0005	g0010	AFR	MSL	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG06807	hp1	a0002	c0003	t0004	g0022	AFR	USA	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
HG06807	hp2	a0001	c0002	t0001	g0001	AFR	USA	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA18955	hp1	a0001	c0001	t0003	g0003	EAS	JPT	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA20300	hp1	a0001	c0002	t0001	g0013	AFR	USA	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA20300	hp2	a0001	c0002	t0001	g0102	AFR	USA	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA21309	hp1	a0001	c0002	t0001	g0093	AFR	LWK	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
NA21309	hp2	a0001	c0001	t0001	g0037	AFR	LWK	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
homoSapiens_chm13v2	hp1	a0001	c0002	t0001	g0018	REF	REF	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444
homoSapiens_grch38	hp1	a0001	c0002	t0001	g0008	REF	REF	SSX1_chrX_48250392_48272444	SSX1	chrX	48250392	48272444

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:48258568	A A	G G	1	a0003 a0003	2	HG01257.hp1 HG01258.hp1 HG01257.hp1 HG01258.hp1	missense_variant	MODERATE	c.217A>G c.217A>G	p.Asn73Asp p.Asn73Asp	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/8	278/1223	217/567	73/188		chrX	48258568
chrX:48261787	T T	G G	1	a0004 a0004	2	HG01192.hp1 HG01433.hp1 HG01192.hp1 HG01433.hp1	missense_variant	MODERATE	c.302T>G c.302T>G	p.Phe101Cys p.Phe101Cys	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/8	363/1223	302/567	101/188		chrX	48261787
chrX:48263819	C C	T T	2	a0002 a0006 a0002 a0006	14	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(11): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	missense_variant	MODERATE	c.368C>T c.368C>T	p.Ser123Leu p.Ser123Leu	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/8	429/1223	368/567	123/188		chrX	48263819
chrX:48263843	G G	GC GC	1	a0008 a0008	1	NA19055.hp1 NA19055.hp1	frameshift_variant	HIGH	c.395dupC c.395dupC	p.Gln133fs p.Gln133fs	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/8	457/1223	396/567	132/188	INFO_REALIGN_3_PRIME	chrX	48263843
chrX:48266158	TGTGAAAA others(148): Show TGTGAAAAACTGGATAAAGAAGGCCCATGGGCACTTGGGAGGGAGGAGGC ATCTCCTTTTTTTGAGAAAACAGAGCCTAACACTCTTCAACGTACCCAAC CCTCATCTTCCAACTCTTCTCCATCATAGGACCCAAAAGGGGGAAACATG CCTGGA	T T	1	a0007 a0007	1	HG04115.hp1 HG04115.hp1	splice_acceptor_variant&disruptive_inframe_deletion&splice_region_variant&intron_variant	HIGH	c.467-128_493del c.467-128_493del	p.Gly156_Thr165delin others(4): Show p.Gly156_Thr165delinsAla	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	7/8		467/567	156/188		chrX	48266158
chrX:48266325	C C	A A	1	a0005 a0005	2	HG01167.hp1 HG01169.hp1 HG01167.hp1 HG01169.hp1	missense_variant	MODERATE	c.505C>A c.505C>A	p.Arg169Ser p.Arg169Ser	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	7/8	566/1223	505/567	169/188		chrX	48266325
chrX:48266356	A A	G G	1	a0006 a0006	1	HG03486.hp2 HG03486.hp2	missense_variant	MODERATE	c.536A>G c.536A>G	p.Glu179Gly p.Glu179Gly	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	7/8	597/1223	536/567	179/188		chrX	48266356

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:48266363	T T	C C	7	a0001c0001 a0002c0003 a0003c0006 others(4): Show a0001c0001 a0002c0003 a0003c0006 a0004c0004 a0006c0009 a0007c0007 a0008c0008	187	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(184): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18945.hp1 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18972.hp1 NA18973.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19058.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19067.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp2	synonymous_variant	LOW	c.543T>C c.543T>C	p.Ser181Ser p.Ser181Ser	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	7/8	604/1223	543/567	181/188			chrX	48266363

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:48255412	A A	C C	2	a0001c0001t0006 a0001c0002t0015 a0001c0001t0006 a0001c0002t0015	4	HG00597.hp1 HG02523.hp1 NA18964.hp2 others(1): Show HG00597.hp1 HG02523.hp1 NA18964.hp2 NA19090.hp1	5_prime_UTR_variant	MODIFIER	c.-41A>C c.-41A>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/8	1830		chrX	48255412
chrX:48266979	G G	GA GA	11	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 others(8): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0002c0003t0004 a0002c0003t0007 a0004c0004t0002 a0006c0009t0004 a0008c0008t0009	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.133dupA c.133dupA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	596	INFO_REALIGN_3_PRIME	chrX	48266979
chrX:48266983	C C	G G	11	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 others(8): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0002c0003t0004 a0002c0003t0007 a0004c0004t0002 a0006c0009t0004 a0008c0008t0009	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.134C>G c.134C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	596		chrX	48266983
chrX:48267054	C C	T T	1	a0002c0003t0007 a0002c0003t0007	2	HG02451.hp1 HG02622.hp1 HG02451.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.205C>T c.205C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	667		chrX	48267054
chrX:48267157	G G	T T	1	a0001c0001t0013 a0001c0001t0013	1	HG00738.hp1 HG00738.hp1	3_prime_UTR_variant	MODIFIER	c.308G>T c.308G>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	770		chrX	48267157
chrX:48267167	C C	G G	11	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 others(8): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0002c0003t0004 a0002c0003t0007 a0004c0004t0002 a0006c0009t0004 a0008c0008t0009	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.318C>G c.318C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	780		chrX	48267167
chrX:48267246	C C	CCT CCT	1	a0008c0008t0009 a0008c0008t0009	1	NA19055.hp1 NA19055.hp1	3_prime_UTR_variant	MODIFIER	c.400_401dupCT c.400_401dupCT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	864	INFO_REALIGN_3_PRIME	chrX	48267246
chrX:48267256	T T	TAC TAC	1	a0001c0002t0014 a0001c0002t0014	1	HG04199.hp1 HG04199.hp1	3_prime_UTR_variant	MODIFIER	c.428_429dupAC c.428_429dupAC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	892	INFO_REALIGN_3_PRIME	chrX	48267256
chrX:48267256	TAC TAC	T T	3	a0002c0003t0004 a0002c0003t0007 a0006c0009t0004 a0002c0003t0004 a0002c0003t0007 a0006c0009t0004	14	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(11): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.428_429delAC c.428_429delAC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	890	INFO_REALIGN_3_PRIME	chrX	48267256
chrX:48267278	C C	CACACACA others(7): Show CACACACACACAGAG	1	a0001c0001t0010 a0001c0001t0010	1	HG02572.hp1 HG02572.hp1	3_prime_UTR_variant	MODIFIER	c.429_430insACACAC others(8): Show c.429_430insACACACACACAGAG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	892		chrX	48267278
chrX:48267278	C C	CACACACA others(7): Show CACACACACAGAGAG	2	a0001c0001t0005 a0001c0001t0013 a0001c0001t0005 a0001c0001t0013	11	HG00738.hp1 HG01884.hp2 HG02080.hp1 others(8): Show HG00738.hp1 HG01884.hp2 HG02080.hp1 HG02486.hp1 HG02809.hp2 HG02886.hp2 HG03471.hp1 HG03540.hp2 NA18990.hp1 NA19076.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.429_430insACACAC others(8): Show c.429_430insACACACACAGAGAG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	892		chrX	48267278
chrX:48267278	C C	CACACACA others(9): Show CACACACACAGAGAGAG	2	a0001c0001t0011 a0001c0001t0012 a0001c0001t0011 a0001c0001t0012	2	NA18960.hp1 NA19054.hp2 NA18960.hp1 NA19054.hp2	3_prime_UTR_variant	MODIFIER	c.429_430insACACAC others(10): Show c.429_430insACACACACAGAGAGAG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	892		chrX	48267278
chrX:48267278	C C	CACACACA others(7): Show CACACACAGAGAGAG	2	a0001c0001t0002 a0004c0004t0002 a0001c0001t0002 a0004c0004t0002	91	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(88): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02083.hp1 HG02109.hp1 HG02559.hp1 HG02683.hp2 HG02698.hp1 HG03239.hp1 HG03486.hp1 HG03490.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20752.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.429_430insACACAC others(8): Show c.429_430insACACACAGAGAGAG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	892		chrX	48267278
chrX:48267279	G G	A A	8	a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 others(5): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0004c0004t0002 a0008c0008t0009	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.430G>A c.430G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	892		chrX	48267279
chrX:48267280	C C	CACACAGA others(5): Show CACACAGAGAGAG	1	a0008c0008t0009 a0008c0008t0009	1	NA19055.hp1 NA19055.hp1	3_prime_UTR_variant	MODIFIER	c.436_437insGAGAGA others(6): Show c.436_437insGAGAGAGACACA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	899	INFO_REALIGN_3_PRIME	chrX	48267280
chrX:48267341	T T	TC TC	1	a0001c0001t0011 a0001c0001t0011	1	NA19054.hp2 NA19054.hp2	3_prime_UTR_variant	MODIFIER	c.494dupC c.494dupC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	957	INFO_REALIGN_3_PRIME	chrX	48267341
chrX:48267357	CT CT	C C	3	a0002c0003t0004 a0002c0003t0007 a0006c0009t0004 a0002c0003t0004 a0002c0003t0007 a0006c0009t0004	14	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(11): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.509delT c.509delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	971		chrX	48267357
chrX:48267373	T T	G G	4	a0001c0001t0003 a0001c0001t0006 a0003c0006t0003 others(1): Show a0001c0001t0003 a0001c0001t0006 a0003c0006t0003 a0007c0007t0003	66	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(63): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1	3_prime_UTR_variant	MODIFIER	c.524T>G c.524T>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	986		chrX	48267373
chrX:48267392	A A	C C	1	a0001c0002t0008 a0001c0002t0008	2	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	3_prime_UTR_variant	MODIFIER	c.543A>C c.543A>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	1005		chrX	48267392
chrX:48267395	C C	T T	1	a0001c0002t0008 a0001c0002t0008	2	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	3_prime_UTR_variant	MODIFIER	c.546C>T c.546C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	1008		chrX	48267395
chrX:48267403	CT CT	C C	1	a0001c0002t0008 a0001c0002t0008	2	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	3_prime_UTR_variant	MODIFIER	c.555delT c.555delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	8/8	1017		chrX	48267403

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:48255453	A A	C C	1	a0001c0001t0002g0141 a0001c0001t0002g0141	1	NA20752.hp1 NA20752.hp1	intron_variant	MODIFIER	c.-21+21A>C c.-21+21A>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255453
chrX:48255523	T T	A A	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.-21+91T>A c.-21+91T>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255523
chrX:48255525	C C	T T	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.-21+93C>T c.-21+93C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255525
chrX:48255604	T T	A A	2	a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0038 a0001c0001t0003g0039	2	NA18956.hp1 NA19083.hp1 NA18956.hp1 NA19083.hp1	intron_variant	MODIFIER	c.-21+172T>A c.-21+172T>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255604
chrX:48255616	T T	C C	1	a0002c0003t0004g0040 a0002c0003t0004g0040	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.-21+184T>C c.-21+184T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255616
chrX:48255631	G G	GT GT	19	a0001c0001t0001g0037 a0001c0001t0002g0036 a0001c0001t0002g0126 others(16): Show a0001c0001t0001g0037 a0001c0001t0002g0036 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0003g0020 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0136 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0008c0008t0009g0125	23	HG00438.hp1 HG00741.hp1 HG00741.hp2 others(20): Show HG00438.hp1 HG00741.hp1 HG00741.hp2 HG01928.hp1 HG02572.hp1 HG02602.hp1 HG02738.hp1 HG02809.hp2 HG03834.hp2 HG03927.hp1 NA18940.hp1 NA18956.hp2 NA18963.hp2 NA18972.hp2 NA18987.hp1 NA19010.hp2 NA19030.hp1 NA19055.hp1 NA19067.hp1 NA19075.hp1 NA19076.hp1 NA19086.hp1 NA21309.hp2	intron_variant	MODIFIER	c.-21+218dupT c.-21+218dupT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48255631
chrX:48255631	G G	GTT GTT	2	a0001c0002t0001g0140 a0002c0003t0004g0040 a0001c0002t0001g0140 a0002c0003t0004g0040	2	HG01361.hp2 HG02615.hp2 HG01361.hp2 HG02615.hp2	intron_variant	MODIFIER	c.-21+217_-21+218dup others(2): Show c.-21+217_-21+218dupTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48255631
chrX:48255631	GT GT	G G	7	a0001c0001t0002g0014 a0001c0001t0002g0042 a0001c0001t0002g0043 others(4): Show a0001c0001t0002g0014 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0047	10	HG01255.hp1 HG01934.hp1 HG02109.hp1 others(7): Show HG01255.hp1 HG01934.hp1 HG02109.hp1 HG02451.hp2 HG02559.hp1 HG03486.hp1 NA18959.hp1 NA19030.hp2 NA19072.hp1 NA19074.hp2	intron_variant	MODIFIER	c.-21+218delT c.-21+218delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48255631
chrX:48255631	GTTT GTTT	G G	1	a0001c0001t0002g0041 a0001c0001t0002g0041	1	HG03927.hp2 HG03927.hp2	intron_variant	MODIFIER	c.-21+216_-21+218del others(3): Show c.-21+216_-21+218delTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48255631
chrX:48255660	G G	C C	1	a0001c0001t0002g0048 a0001c0001t0002g0048	1	NA18950.hp1 NA18950.hp1	intron_variant	MODIFIER	c.-21+228G>C c.-21+228G>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255660
chrX:48255662	G G	A A	1	a0001c0002t0001g0049 a0001c0002t0001g0049	1	NA18974.hp1 NA18974.hp1	intron_variant	MODIFIER	c.-21+230G>A c.-21+230G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255662
chrX:48255717	C C	T T	2	a0001c0002t0001g0123 a0001c0002t0001g0139 a0001c0002t0001g0123 a0001c0002t0001g0139	2	NA18956.hp2 NA18992.hp2 NA18956.hp2 NA18992.hp2	intron_variant	MODIFIER	c.-21+285C>T c.-21+285C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255717
chrX:48255718	G G	A A	11	a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 others(8): Show a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0006c0009t0004g0015	14	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(11): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-21+286G>A c.-21+286G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255718
chrX:48255765	T T	A A	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-21+333T>A c.-21+333T>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255765
chrX:48255893	G G	T T	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.-21+461G>T c.-21+461G>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255893
chrX:48255894	C C	CT CT	17	a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 others(14): Show a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0128 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0002t0001g0035 a0001c0002t0001g0120 a0001c0002t0001g0121 a0001c0002t0001g0139 a0002c0003t0004g0023 a0002c0003t0007g0054 a0007c0007t0003g0118	21	HG01070.hp1 HG01071.hp1 HG01358.hp1 others(18): Show HG01070.hp1 HG01071.hp1 HG01358.hp1 HG01978.hp1 HG02145.hp1 HG02622.hp1 HG02622.hp2 HG03688.hp1 HG04115.hp1 NA18956.hp2 NA18957.hp1 NA18963.hp2 NA18972.hp1 NA18979.hp2 NA18981.hp1 NA18989.hp1 NA19010.hp1 NA19043.hp1 NA19058.hp1 NA19077.hp2 NA19078.hp1	intron_variant	MODIFIER	c.-21+481dupT c.-21+481dupT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48255894
chrX:48255894	C C	CTT CTT	2	a0001c0001t0005g0129 a0001c0002t0001g0138 a0001c0001t0005g0129 a0001c0002t0001g0138	2	NA19030.hp1 NA19076.hp1 NA19030.hp1 NA19076.hp1	intron_variant	MODIFIER	c.-21+480_-21+481dup others(2): Show c.-21+480_-21+481dupTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48255894
chrX:48255894	C C	G G	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.-21+462C>G c.-21+462C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255894
chrX:48255894	CT CT	C C	2	a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0055 a0001c0001t0002g0056	2	HG01169.hp2 NA19063.hp1 HG01169.hp2 NA19063.hp1	intron_variant	MODIFIER	c.-21+481delT c.-21+481delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48255894
chrX:48255895	T T	C C	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.-21+463T>C c.-21+463T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48255895
chrX:48256015	C C	T T	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-21+583C>T c.-21+583C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256015
chrX:48256016	G G	GC GC	1	a0001c0001t0005g0129 a0001c0001t0005g0129	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.-21+588dupC c.-21+588dupC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256016
chrX:48256069	A A	T T	1	a0001c0002t0001g0137 a0001c0002t0001g0137	1	HG02602.hp1 HG02602.hp1	intron_variant	MODIFIER	c.-21+637A>T c.-21+637A>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256069
chrX:48256077	C C	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-21+645C>A c.-21+645C>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256077
chrX:48256082	TG TG	T T	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.-21+653delG c.-21+653delG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256082
chrX:48256255	C C	T T	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-21+823C>T c.-21+823C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256255
chrX:48256285	C C	T T	1	a0001c0001t0013g0070 a0001c0001t0013g0070	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.-21+853C>T c.-21+853C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256285
chrX:48256383	G G	GC GC	1	a0001c0001t0005g0129 a0001c0001t0005g0129	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.-20-832dupC c.-20-832dupC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256383
chrX:48256389	C C	G G	1	a0001c0001t0013g0070 a0001c0001t0013g0070	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.-20-833C>G c.-20-833C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256389
chrX:48256445	T T	TTG TTG	1	a0001c0001t0002g0075 a0001c0001t0002g0075	1	NA19078.hp1 NA19078.hp1	intron_variant	MODIFIER	c.-20-772_-20-771dup others(2): Show c.-20-772_-20-771dupTG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256445
chrX:48256455	G G	GT GT	56	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(53): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0072 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0001c0002t0001g0013 a0001c0002t0001g0032 a0001c0002t0001g0049 a0001c0002t0001g0100 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0001g0103 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0110 a0001c0002t0001g0111 a0001c0002t0001g0120 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0138 a0001c0002t0001g0139 a0002c0003t0004g0015 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0006c0009t0004g0015	116	HG00099.hp1 HG00099.hp2 HG00423.hp2 others(113): Show HG00099.hp1 HG00099.hp2 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01074.hp1 HG01106.hp1 HG01109.hp1 HG01168.hp1 HG01169.hp2 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02145.hp1 HG02293.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02622.hp1 HG02683.hp2 HG02698.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03927.hp2 HG03942.hp1 HG04184.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18949.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18956.hp2 NA18959.hp1 NA18960.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18969.hp2 NA18973.hp2 NA18974.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18985.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19054.hp2 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19077.hp1 NA19078.hp2 NA19085.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-20-742dupT c.-20-742dupT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256455
chrX:48256455	G G	GTT GTT	22	a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 others(19): Show a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0044 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0002t0001g0112 a0002c0003t0004g0023 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0004c0004t0002g0016 a0008c0008t0009g0125	27	HG00323.hp1 HG00621.hp1 HG01071.hp1 others(24): Show HG00323.hp1 HG00621.hp1 HG01071.hp1 HG01123.hp1 HG01192.hp1 HG01255.hp1 HG01891.hp2 HG01975.hp1 HG01978.hp1 HG02258.hp1 HG02572.hp1 HG02622.hp2 HG02647.hp1 NA18906.hp2 NA18963.hp2 NA18995.hp1 NA18997.hp1 NA19009.hp1 NA19043.hp1 NA19055.hp1 NA19076.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-20-743_-20-742dup others(2): Show c.-20-743_-20-742dupTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256455
chrX:48256455	G G	GTTT GTTT	1	a0002c0003t0004g0022 a0002c0003t0004g0022	2	HG06807.hp1 NA18906.hp1 HG06807.hp1 NA18906.hp1	intron_variant	MODIFIER	c.-20-744_-20-742dup others(3): Show c.-20-744_-20-742dupTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256455
chrX:48256455	G G	GTTTT GTTTT	1	a0002c0003t0004g0040 a0002c0003t0004g0040	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.-20-745_-20-742dup others(4): Show c.-20-745_-20-742dupTTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256455
chrX:48256455	G G	GTTTTT GTTTTT	6	a0001c0002t0001g0021 a0001c0002t0001g0047 a0001c0002t0001g0113 others(3): Show a0001c0002t0001g0021 a0001c0002t0001g0047 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0121 a0001c0002t0001g0136	8	HG00323.hp2 HG00544.hp2 HG01358.hp1 others(5): Show HG00323.hp2 HG00544.hp2 HG01358.hp1 HG01943.hp1 HG02074.hp1 NA19074.hp2 NA19075.hp1 NA19082.hp1	intron_variant	MODIFIER	c.-20-746_-20-742dup others(5): Show c.-20-746_-20-742dupTTTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256455
chrX:48256455	G G	GTTTTTT GTTTTTT	4	a0001c0002t0001g0019 a0001c0002t0001g0116 a0001c0002t0001g0137 others(1): Show a0001c0002t0001g0019 a0001c0002t0001g0116 a0001c0002t0001g0137 a0001c0002t0015g0115	7	HG01361.hp1 HG02155.hp2 HG02602.hp1 others(4): Show HG01361.hp1 HG02155.hp2 HG02602.hp1 HG04184.hp1 NA18964.hp2 NA18971.hp1 NA18979.hp1	intron_variant	MODIFIER	c.-20-747_-20-742dup others(6): Show c.-20-747_-20-742dupTTTTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256455
chrX:48256455	GT GT	G G	2	a0001c0001t0003g0038 a0001c0001t0003g0122 a0001c0001t0003g0038 a0001c0001t0003g0122	2	NA18968.hp1 NA19083.hp1 NA18968.hp1 NA19083.hp1	intron_variant	MODIFIER	c.-20-742delT c.-20-742delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256455
chrX:48256465	T T	TG TG	3	a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087	3	HG01981.hp1 HG02818.hp1 NA18998.hp2 HG01981.hp1 HG02818.hp1 NA18998.hp2	intron_variant	MODIFIER	c.-20-757_-20-756ins others(1): Show c.-20-757_-20-756insG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256465
chrX:48256466	T T	G G	23	a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 others(20): Show a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0006g0003 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	61	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(58): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19088.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-20-756T>G c.-20-756T>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256466
chrX:48256467	T T	G G	2	a0001c0001t0003g0038 a0001c0001t0003g0122 a0001c0001t0003g0038 a0001c0001t0003g0122	2	NA18968.hp1 NA19083.hp1 NA18968.hp1 NA19083.hp1	intron_variant	MODIFIER	c.-20-755T>G c.-20-755T>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256467
chrX:48256482	T T	G G	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-20-740T>G c.-20-740T>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256482
chrX:48256552	C C	T T	1	a0001c0002t0001g0138 a0001c0002t0001g0138	1	NA19030.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-20-670C>T c.-20-670C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48256552
chrX:48256557	TC TC	T T	1	a0001c0001t0003g0038 a0001c0001t0003g0038	1	NA19083.hp1 NA19083.hp1	intron_variant	MODIFIER	c.-20-662delC c.-20-662delC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256557
chrX:48256764	AC AC	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-20-451delC c.-20-451delC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256764
chrX:48256851	T T	TG TG	1	a0001c0001t0002g0075 a0001c0001t0002g0075	1	NA19078.hp1 NA19078.hp1	intron_variant	MODIFIER	c.-20-366dupG c.-20-366dupG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7	INFO_REALIGN_3_PRIME	chrX	48256851
chrX:48257002	G G	A A	2	a0001c0001t0002g0024 a0001c0001t0002g0057 a0001c0001t0002g0024 a0001c0001t0002g0057	3	NA18977.hp1 NA19087.hp1 NA19089.hp1 NA18977.hp1 NA19087.hp1 NA19089.hp1	intron_variant	MODIFIER	c.-20-220G>A c.-20-220G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48257002
chrX:48257008	C C	T T	1	a0002c0003t0004g0040 a0002c0003t0004g0040	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.-20-214C>T c.-20-214C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48257008
chrX:48257019	A A	G G	6	a0001c0002t0001g0007 a0001c0002t0001g0099 a0001c0002t0001g0111 others(3): Show a0001c0002t0001g0007 a0001c0002t0001g0099 a0001c0002t0001g0111 a0001c0002t0001g0123 a0001c0002t0001g0131 a0001c0002t0001g0139	13	HG00544.hp1 HG01928.hp1 HG02132.hp1 others(10): Show HG00544.hp1 HG01928.hp1 HG02132.hp1 HG02273.hp1 HG02523.hp2 NA18747.hp1 NA18944.hp1 NA18949.hp2 NA18954.hp1 NA18956.hp2 NA18967.hp1 NA18992.hp2 NA19081.hp1	intron_variant	MODIFIER	c.-20-203A>G c.-20-203A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48257019
chrX:48257028	T T	C C	28	a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 others(25): Show a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0006g0003 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	66	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(63): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-20-194T>C c.-20-194T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48257028
chrX:48257148	G G	A A	28	a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 others(25): Show a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0006g0003 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	66	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(63): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1	intron_variant	MODIFIER	c.-20-74G>A c.-20-74G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	1/7		chrX	48257148
chrX:48257351	C C	G G	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.69+41C>G c.69+41C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	2/7		chrX	48257351
chrX:48257520	G G	C C	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.69+210G>C c.69+210G>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	2/7		chrX	48257520
chrX:48257735	A A	AT AT	1	a0001c0001t0005g0129 a0001c0001t0005g0129	1	NA19076.hp1 NA19076.hp1	splice_acceptor_variant&intron_variant	HIGH	c.70-3dupT c.70-3dupT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	2/7	INFO_REALIGN_3_PRIME	chrX	48257735
chrX:48257915	C C	G G	1	a0001c0001t0003g0084 a0001c0001t0003g0084	1	HG02040.hp1 HG02040.hp1	intron_variant	MODIFIER	c.184+55C>G c.184+55C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7		chrX	48257915
chrX:48257994	TG TG	T T	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.184+139delG c.184+139delG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48257994
chrX:48258169	CT CT	C C	1	a0001c0001t0002g0075 a0001c0001t0002g0075	1	NA19078.hp1 NA19078.hp1	intron_variant	MODIFIER	c.184+312delT c.184+312delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258169
chrX:48258185	C C	CT CT	24	a0001c0001t0002g0006 a0001c0001t0002g0025 a0001c0001t0002g0064 others(21): Show a0001c0001t0002g0006 a0001c0001t0002g0025 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0069 a0001c0001t0002g0075 a0001c0001t0003g0038 a0001c0001t0003g0083 a0001c0001t0003g0119 a0001c0001t0005g0006 a0001c0001t0010g0127 a0001c0001t0013g0070 a0001c0002t0001g0012 a0001c0002t0001g0097 a0001c0002t0001g0098 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0111 a0001c0002t0001g0114 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0138 a0007c0007t0003g0118	35	HG00438.hp2 HG00609.hp1 HG00621.hp1 others(32): Show HG00438.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01175.hp2 HG01928.hp1 HG02027.hp1 HG02080.hp1 HG02135.hp1 HG02572.hp1 HG02683.hp1 HG02698.hp1 HG02970.hp1 HG04115.hp1 HG04184.hp2 NA18945.hp1 NA18954.hp2 NA18957.hp2 NA18966.hp1 NA18967.hp1 NA18969.hp2 NA18972.hp2 NA18973.hp2 NA18980.hp1 NA18985.hp1 NA18989.hp1 NA18997.hp1 NA19004.hp1 NA19030.hp1 NA19070.hp1 NA19078.hp1 NA19082.hp1 NA19083.hp1 NA19090.hp2 NA19240.hp2	intron_variant	MODIFIER	c.185-327dupT c.185-327dupT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258185
chrX:48258185	C C	CTT CTT	2	a0001c0001t0005g0129 a0001c0002t0001g0116 a0001c0001t0005g0129 a0001c0002t0001g0116	2	NA18979.hp1 NA19076.hp1 NA18979.hp1 NA19076.hp1	intron_variant	MODIFIER	c.185-328_185-327dup others(2): Show c.185-328_185-327dupTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258185
chrX:48258185	C C	CTTT CTTT	1	a0001c0002t0001g0110 a0001c0002t0001g0110	1	HG02818.hp2 HG02818.hp2	intron_variant	MODIFIER	c.185-329_185-327dup others(3): Show c.185-329_185-327dupTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258185
chrX:48258185	CT CT	C C	10	a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0003g0026 others(7): Show a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0003g0026 a0001c0001t0003g0033 a0001c0002t0001g0017 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0100 a0001c0002t0015g0115 a0005c0005t0001g0017	14	HG01167.hp1 HG01169.hp2 HG01884.hp1 others(11): Show HG01167.hp1 HG01169.hp2 HG01884.hp1 HG02280.hp2 HG02886.hp1 HG02895.hp1 HG03942.hp1 NA18948.hp1 NA18964.hp2 NA18987.hp2 NA19012.hp1 NA19058.hp1 NA19077.hp2 NA19087.hp2	intron_variant	MODIFIER	c.185-327delT c.185-327delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258185
chrX:48258185	CTTTT CTTTT	C C	1	a0002c0003t0004g0040 a0002c0003t0004g0040	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.185-330_185-327del others(4): Show c.185-330_185-327delTTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258185
chrX:48258187	T T	TTTTC TTTTC	3	a0002c0003t0004g0023 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0004g0023 a0002c0003t0004g0052 a0002c0003t0004g0053	4	HG01891.hp2 HG02622.hp2 NA19043.hp1 others(1): Show HG01891.hp2 HG02622.hp2 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.184+330_184+331ins others(4): Show c.184+330_184+331insCTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258187
chrX:48258188	T T	TTTC TTTC	4	a0002c0003t0004g0015 a0002c0003t0007g0015 a0002c0003t0007g0054 others(1): Show a0002c0003t0004g0015 a0002c0003t0007g0015 a0002c0003t0007g0054 a0006c0009t0004g0015	5	HG02451.hp1 HG02622.hp1 HG02970.hp2 others(2): Show HG02451.hp1 HG02622.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2	intron_variant	MODIFIER	c.184+330_184+331ins others(3): Show c.184+330_184+331insCTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258188
chrX:48258189	T T	TTC TTC	3	a0002c0003t0004g0022 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0022 a0002c0003t0004g0050 a0002c0003t0004g0051	4	HG02258.hp1 HG02647.hp1 HG06807.hp1 others(1): Show HG02258.hp1 HG02647.hp1 HG06807.hp1 NA18906.hp1	intron_variant	MODIFIER	c.184+330_184+331ins others(2): Show c.184+330_184+331insCT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258189
chrX:48258195	T T	C C	1	a0002c0003t0004g0040 a0002c0003t0004g0040	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.184+335T>C c.184+335T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7		chrX	48258195
chrX:48258328	A A	C C	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.185-208A>C c.185-208A>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7		chrX	48258328
chrX:48258481	AC AC	A A	1	a0003c0006t0003g0076 a0003c0006t0003g0076	1	HG01258.hp1 HG01258.hp1	intron_variant	MODIFIER	c.185-53delC c.185-53delC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	3/7	INFO_REALIGN_3_PRIME	chrX	48258481
chrX:48258810	A A	AAC AAC	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+180_280+181ins others(2): Show c.280+180_280+181insCA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48258810
chrX:48258885	G G	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+254G>A c.280+254G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48258885
chrX:48258897	T T	C C	1	a0001c0002t0001g0029 a0001c0002t0001g0029	2	HG02257.hp1 HG02559.hp2 HG02257.hp1 HG02559.hp2	intron_variant	MODIFIER	c.280+266T>C c.280+266T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48258897
chrX:48258919	G G	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+288G>A c.280+288G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48258919
chrX:48258976	G G	GTGTTT GTGTTT	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+356_280+360dup others(5): Show c.280+356_280+360dupTGTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48258976
chrX:48259001	T T	TTGTTTTT others(5): Show TTGTTTTTGTTTC	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+381_280+382ins others(12): Show c.280+381_280+382insCTGTTTTTGTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48259001
chrX:48259091	G G	A A	1	a0001c0001t0003g0077 a0001c0001t0003g0077	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.280+460G>A c.280+460G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259091
chrX:48259098	A A	G G	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+467A>G c.280+467A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259098
chrX:48259099	C C	A A	10	a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 others(7): Show a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0006c0009t0004g0015	13	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(10): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.280+468C>A c.280+468C>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259099
chrX:48259186	G G	A A	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+555G>A c.280+555G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259186
chrX:48259203	A A	G G	1	a0001c0002t0001g0096 a0001c0002t0001g0096	1	HG03834.hp1 HG03834.hp1	intron_variant	MODIFIER	c.280+572A>G c.280+572A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259203
chrX:48259209	C C	T T	1	a0001c0001t0002g0063 a0001c0001t0002g0063	1	HG03704.hp2 HG03704.hp2	intron_variant	MODIFIER	c.280+578C>T c.280+578C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259209
chrX:48259277	G G	C C	1	a0001c0002t0001g0123 a0001c0002t0001g0123	1	NA18992.hp2 NA18992.hp2	intron_variant	MODIFIER	c.280+646G>C c.280+646G>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259277
chrX:48259396	T T	C C	1	a0001c0002t0014g0090 a0001c0002t0014g0090	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.280+765T>C c.280+765T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259396
chrX:48259397	A A	T T	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+766A>T c.280+766A>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259397
chrX:48259454	G G	GT GT	3	a0001c0002t0001g0018 a0001c0002t0001g0106 a0002c0003t0004g0052 a0001c0002t0001g0018 a0001c0002t0001g0106 a0002c0003t0004g0052	6	HG00140.hp1 HG01123.hp2 HG01168.hp2 others(3): Show HG00140.hp1 HG01123.hp2 HG01168.hp2 HG01891.hp2 HG03239.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.280+832dupT c.280+832dupT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48259454
chrX:48259454	G G	GTT GTT	57	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(54): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	118	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(115): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+831_280+832dup others(2): Show c.280+831_280+832dupTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48259454
chrX:48259454	G G	GTTT GTTT	1	a0001c0001t0010g0127 a0001c0001t0010g0127	1	HG02572.hp1 HG02572.hp1	intron_variant	MODIFIER	c.280+830_280+832dup others(3): Show c.280+830_280+832dupTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48259454
chrX:48259541	G G	A A	1	a0001c0002t0008g0030 a0001c0002t0008g0030	2	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	intron_variant	MODIFIER	c.280+910G>A c.280+910G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259541
chrX:48259672	A A	G G	1	a0001c0001t0002g0062 a0001c0001t0002g0062	1	HG03490.hp1 HG03490.hp1	intron_variant	MODIFIER	c.280+1041A>G c.280+1041A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259672
chrX:48259749	A A	G G	1	a0001c0002t0001g0095 a0001c0002t0001g0095	1	HG03041.hp1 HG03041.hp1	intron_variant	MODIFIER	c.280+1118A>G c.280+1118A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259749
chrX:48259877	G G	T T	1	a0001c0002t0001g0094 a0001c0002t0001g0094	1	HG01516.hp2 HG01516.hp2	intron_variant	MODIFIER	c.280+1246G>T c.280+1246G>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259877
chrX:48259901	A A	C C	1	a0001c0001t0002g0065 a0001c0001t0002g0065	1	HG02698.hp1 HG02698.hp1	intron_variant	MODIFIER	c.280+1270A>C c.280+1270A>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259901
chrX:48259913	T T	C C	1	a0002c0003t0004g0040 a0002c0003t0004g0040	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.280+1282T>C c.280+1282T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259913
chrX:48259968	G G	C C	1	a0001c0001t0001g0037 a0001c0001t0001g0037	1	NA21309.hp2 NA21309.hp2	intron_variant	MODIFIER	c.280+1337G>C c.280+1337G>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48259968
chrX:48260010	T T	C C	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.280+1379T>C c.280+1379T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48260010
chrX:48260022	T T	G G	1	a0001c0002t0001g0029 a0001c0002t0001g0029	2	HG02257.hp1 HG02559.hp2 HG02257.hp1 HG02559.hp2	intron_variant	MODIFIER	c.280+1391T>G c.280+1391T>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48260022
chrX:48260110	C C	T T	1	a0001c0001t0003g0082 a0001c0001t0003g0082	1	HG04204.hp1 HG04204.hp1	intron_variant	MODIFIER	c.280+1479C>T c.280+1479C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48260110
chrX:48260233	A A	G G	43	a0001c0002t0001g0001 a0001c0002t0001g0005 a0001c0002t0001g0007 others(40): Show a0001c0002t0001g0001 a0001c0002t0001g0005 a0001c0002t0001g0007 a0001c0002t0001g0009 a0001c0002t0001g0012 a0001c0002t0001g0013 a0001c0002t0001g0017 a0001c0002t0001g0018 a0001c0002t0001g0029 a0001c0002t0001g0032 a0001c0002t0001g0035 a0001c0002t0001g0046 a0001c0002t0001g0049 a0001c0002t0001g0089 a0001c0002t0001g0092 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0096 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0001g0100 a0001c0002t0001g0103 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0111 a0001c0002t0001g0123 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0008g0030 a0001c0002t0014g0090 a0005c0005t0001g0001 a0005c0005t0001g0017	119	HG00140.hp1 HG00280.hp1 HG00408.hp1 others(116): Show HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp2 HG00642.hp1 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01346.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01981.hp2 HG02027.hp1 HG02080.hp2 HG02129.hp1 HG02132.hp1 HG02257.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp1 HG02523.hp2 HG02559.hp2 HG02683.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG03017.hp1 HG03130.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03491.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03831.hp2 HG03834.hp1 HG04184.hp2 HG04199.hp1 HG06807.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp2 NA18944.hp1 NA18949.hp1 NA18949.hp2 NA18954.hp1 NA18956.hp2 NA18957.hp2 NA18961.hp1 NA18962.hp1 NA18963.hp1 NA18964.hp1 NA18967.hp1 NA18970.hp1 NA18972.hp2 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18983.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18992.hp2 NA18994.hp1 NA18997.hp2 NA18999.hp2 NA19010.hp1 NA19012.hp1 NA19030.hp1 NA19054.hp1 NA19056.hp1 NA19060.hp1 NA19062.hp1 NA19065.hp1 NA19066.hp1 NA19068.hp1 NA19078.hp2 NA19081.hp1 NA19087.hp2 NA19240.hp2 NA20300.hp1 NA20805.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.281-1533A>G c.281-1533A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48260233
chrX:48260296	GTTGT GTTGT	G G	1	a0001c0001t0003g0081 a0001c0001t0003g0081	1	HG02055.hp1 HG02055.hp1	intron_variant	MODIFIER	c.281-1463_281-1460d others(6): Show c.281-1463_281-1460delGTTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48260296
chrX:48260303	GT GT	G G	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.281-1456delT c.281-1456delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48260303
chrX:48260376	CA CA	C C	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.281-1385delA c.281-1385delA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48260376
chrX:48260555	GA GA	G G	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.281-1207delA c.281-1207delA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48260555
chrX:48260771	C C	T T	1	a0001c0002t0001g0112 a0001c0002t0001g0112	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.281-995C>T c.281-995C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48260771
chrX:48260784	GA GA	G G	58	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(55): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	119	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(116): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.281-973delA c.281-973delA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48260784
chrX:48260858	T T	C C	24	a0001c0001t0003g0003 a0001c0001t0003g0020 a0001c0001t0003g0026 others(21): Show a0001c0001t0003g0003 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0006g0003 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	58	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(55): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02135.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1	intron_variant	MODIFIER	c.281-908T>C c.281-908T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48260858
chrX:48260948	A A	T T	148	a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 others(145): Show a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0006g0003 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0001c0002t0001g0001 a0001c0002t0001g0005 a0001c0002t0001g0007 a0001c0002t0001g0009 a0001c0002t0001g0012 a0001c0002t0001g0013 a0001c0002t0001g0017 a0001c0002t0001g0018 a0001c0002t0001g0019 a0001c0002t0001g0021 a0001c0002t0001g0029 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0035 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0049 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0091 a0001c0002t0001g0092 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0096 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0001g0100 a0001c0002t0001g0102 a0001c0002t0001g0103 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0110 a0001c0002t0001g0111 a0001c0002t0001g0112 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0116 a0001c0002t0001g0121 a0001c0002t0001g0123 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0136 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0008g0030 a0001c0002t0014g0090 a0001c0002t0015g0115 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0003c0006t0003g0003 a0003c0006t0003g0076 a0004c0004t0002g0002 a0004c0004t0002g0016 a0005c0005t0001g0001 a0005c0005t0001g0017 a0006c0009t0004g0015 a0007c0007t0003g0118 a0008c0008t0009g0125	329	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(326): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.281-818A>T c.281-818A>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48260948
chrX:48261009	C C	T T	1	a0001c0002t0001g0093 a0001c0002t0001g0093	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.281-757C>T c.281-757C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261009
chrX:48261119	A A	AG AG	1	a0001c0001t0002g0075 a0001c0001t0002g0075	1	NA19078.hp1 NA19078.hp1	intron_variant	MODIFIER	c.281-643dupG c.281-643dupG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48261119
chrX:48261201	ATC ATC	A A	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.281-561_281-560del others(2): Show c.281-561_281-560delCT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7	INFO_REALIGN_3_PRIME	chrX	48261201
chrX:48261218	G G	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.281-548G>A c.281-548G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261218
chrX:48261228	C C	A A	1	a0001c0001t0003g0078 a0001c0001t0003g0078	1	HG04228.hp1 HG04228.hp1	intron_variant	MODIFIER	c.281-538C>A c.281-538C>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261228
chrX:48261256	A A	G G	1	a0001c0001t0003g0087 a0001c0001t0003g0087	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.281-510A>G c.281-510A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261256
chrX:48261358	C C	G G	3	a0001c0002t0001g0009 a0001c0002t0001g0109 a0001c0002t0001g0135 a0001c0002t0001g0009 a0001c0002t0001g0109 a0001c0002t0001g0135	8	HG00280.hp1 HG00642.hp1 HG00741.hp1 others(5): Show HG00280.hp1 HG00642.hp1 HG00741.hp1 HG01081.hp2 HG01175.hp1 HG01515.hp1 HG01517.hp2 HG04184.hp2	intron_variant	MODIFIER	c.281-408C>G c.281-408C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261358
chrX:48261503	A A	G G	1	a0001c0001t0002g0068 a0001c0001t0002g0068	1	HG00323.hp1 HG00323.hp1	intron_variant	MODIFIER	c.281-263A>G c.281-263A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261503
chrX:48261567	T T	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.281-199T>A c.281-199T>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261567
chrX:48261575	A A	T T	1	a0002c0003t0004g0053 a0002c0003t0004g0053	1	NA19240.hp1 NA19240.hp1	intron_variant	MODIFIER	c.281-191A>T c.281-191A>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261575
chrX:48261650	C C	T T	1	a0001c0001t0003g0117 a0001c0001t0003g0117	1	NA18957.hp1 NA18957.hp1	intron_variant	MODIFIER	c.281-116C>T c.281-116C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	4/7		chrX	48261650
chrX:48261906	C C	T T	10	a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 others(7): Show a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0006c0009t0004g0015	13	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(10): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.330+91C>T c.330+91C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48261906
chrX:48262058	TC TC	T T	1	a0008c0008t0009g0125 a0008c0008t0009g0125	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.330+245delC c.330+245delC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	48262058
chrX:48262257	A A	G G	10	a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 others(7): Show a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0006c0009t0004g0015	13	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(10): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.330+442A>G c.330+442A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262257
chrX:48262277	G G	T T	28	a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 others(25): Show a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0006g0003 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	66	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(63): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1	intron_variant	MODIFIER	c.330+462G>T c.330+462G>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262277
chrX:48262304	TG TG	T T	1	a0008c0008t0009g0125 a0008c0008t0009g0125	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.330+493delG c.330+493delG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	48262304
chrX:48262316	T T	G G	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.330+501T>G c.330+501T>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262316
chrX:48262326	T T	C C	1	a0001c0001t0003g0027 a0001c0001t0003g0027	2	HG01069.hp1 HG01071.hp2 HG01069.hp1 HG01071.hp2	intron_variant	MODIFIER	c.330+511T>C c.330+511T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262326
chrX:48262363	C C	T T	28	a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 others(25): Show a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0006g0003 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	66	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(63): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1	intron_variant	MODIFIER	c.330+548C>T c.330+548C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262363
chrX:48262542	C C	T T	1	a0001c0001t0002g0043 a0001c0001t0002g0043	1	NA18959.hp1 NA18959.hp1	intron_variant	MODIFIER	c.330+727C>T c.330+727C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262542
chrX:48262604	C C	A A	1	a0001c0001t0002g0059 a0001c0001t0002g0059	1	HG03239.hp1 HG03239.hp1	intron_variant	MODIFIER	c.330+789C>A c.330+789C>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262604
chrX:48262630	T T	C C	1	a0001c0002t0001g0103 a0001c0002t0001g0103	1	HG03654.hp1 HG03654.hp1	intron_variant	MODIFIER	c.330+815T>C c.330+815T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262630
chrX:48262864	G G	A A	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331-918G>A c.331-918G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262864
chrX:48262875	A A	G G	1	a0001c0002t0001g0098 a0001c0002t0001g0098	1	HG02027.hp1 HG02027.hp1	intron_variant	MODIFIER	c.331-907A>G c.331-907A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262875
chrX:48262901	T T	C C	88	a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 others(85): Show a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0006g0003 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0003c0006t0003g0003 a0003c0006t0003g0076 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0007c0007t0003g0118 a0008c0008t0009g0125	187	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(184): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18945.hp1 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18972.hp1 NA18973.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19058.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19067.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.331-881T>C c.331-881T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262901
chrX:48262902	G G	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331-880G>A c.331-880G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262902
chrX:48262931	C C	G G	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331-851C>G c.331-851C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48262931
chrX:48263092	C C	T T	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331-690C>T c.331-690C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263092
chrX:48263101	T T	C C	1	a0002c0003t0004g0050 a0002c0003t0004g0050	1	HG02647.hp1 HG02647.hp1	intron_variant	MODIFIER	c.331-681T>C c.331-681T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263101
chrX:48263123	A A	AC AC	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.331-658dupC c.331-658dupC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	48263123
chrX:48263130	C C	CA CA	30	a0001c0001t0001g0037 a0001c0001t0002g0041 a0001c0001t0003g0003 others(27): Show a0001c0001t0001g0037 a0001c0001t0002g0041 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0006g0003 a0001c0002t0001g0092 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	68	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(65): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1 NA21309.hp2	intron_variant	MODIFIER	c.331-639dupA c.331-639dupA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	48263130
chrX:48263163	GT GT	G G	29	a0001c0001t0001g0037 a0001c0001t0003g0003 a0001c0001t0003g0011 others(26): Show a0001c0001t0001g0037 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0006g0003 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	67	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(64): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1 NA21309.hp2	intron_variant	MODIFIER	c.331-618delT c.331-618delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263163
chrX:48263230	G G	A A	2	a0001c0001t0002g0064 a0001c0001t0002g0075 a0001c0001t0002g0064 a0001c0001t0002g0075	2	NA18945.hp1 NA19078.hp1 NA18945.hp1 NA19078.hp1	intron_variant	MODIFIER	c.331-552G>A c.331-552G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263230
chrX:48263364	T T	C C	1	a0002c0003t0004g0051 a0002c0003t0004g0051	1	HG02258.hp1 HG02258.hp1	intron_variant	MODIFIER	c.331-418T>C c.331-418T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263364
chrX:48263367	TC TC	T T	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.331-411delC c.331-411delC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	48263367
chrX:48263412	G G	A A	1	a0001c0001t0005g0060 a0001c0001t0005g0060	1	HG01884.hp2 HG01884.hp2	intron_variant	MODIFIER	c.331-370G>A c.331-370G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263412
chrX:48263423	G G	A A	1	a0002c0003t0004g0040 a0002c0003t0004g0040	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.331-359G>A c.331-359G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263423
chrX:48263446	C C	T T	3	a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124	7	HG01884.hp2 HG02486.hp1 HG02809.hp2 others(4): Show HG01884.hp2 HG02486.hp1 HG02809.hp2 HG02886.hp2 HG03471.hp1 HG03540.hp2 NA20129.hp2	intron_variant	MODIFIER	c.331-336C>T c.331-336C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263446
chrX:48263463	CT CT	C C	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331-317delT c.331-317delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7	INFO_REALIGN_3_PRIME	chrX	48263463
chrX:48263515	C C	G G	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331-267C>G c.331-267C>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263515
chrX:48263704	G G	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.331-78G>A c.331-78G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	5/7		chrX	48263704
chrX:48264011	T T	TG TG	1	a0008c0008t0009g0125 a0008c0008t0009g0125	1	NA19055.hp1 NA19055.hp1	intron_variant	MODIFIER	c.466+97dupG c.466+97dupG	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	48264011
chrX:48264108	C C	A A	2	a0001c0002t0001g0104 a0001c0002t0001g0132 a0001c0002t0001g0104 a0001c0002t0001g0132	2	HG00741.hp2 HG01070.hp2 HG00741.hp2 HG01070.hp2	intron_variant	MODIFIER	c.466+191C>A c.466+191C>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48264108
chrX:48264134	A A	C C	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.466+217A>C c.466+217A>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48264134
chrX:48264145	C C	T T	1	a0001c0001t0003g0080 a0001c0001t0003g0080	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.466+228C>T c.466+228C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48264145
chrX:48264151	AT AT	A A	1	a0001c0002t0001g0099 a0001c0002t0001g0099	1	NA18954.hp1 NA18954.hp1	intron_variant	MODIFIER	c.466+236delT c.466+236delT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	48264151
chrX:48264188	T T	C C	1	a0001c0002t0001g0113 a0001c0002t0001g0113	1	HG00323.hp2 HG00323.hp2	intron_variant	MODIFIER	c.466+271T>C c.466+271T>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48264188
chrX:48264298	G G	T T	1	a0001c0001t0002g0067 a0001c0001t0002g0067	1	NA19091.hp1 NA19091.hp1	intron_variant	MODIFIER	c.466+381G>T c.466+381G>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48264298
chrX:48264638	TA TA	T T	1	a0001c0002t0001g0099 a0001c0002t0001g0099	1	NA18954.hp1 NA18954.hp1	intron_variant	MODIFIER	c.466+725delA c.466+725delA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	48264638
chrX:48264638	TAAAAG TAAAAG	T T	1	a0001c0001t0003g0079 a0001c0001t0003g0079	1	HG00408.hp2 HG00408.hp2	intron_variant	MODIFIER	c.466+724_466+728del others(5): Show c.466+724_466+728delAAGAA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	48264638
chrX:48264766	T T	A A	1	a0001c0002t0001g0113 a0001c0002t0001g0113	1	HG00323.hp2 HG00323.hp2	intron_variant	MODIFIER	c.466+849T>A c.466+849T>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48264766
chrX:48264800	A A	T T	3	a0001c0001t0003g0011 a0001c0001t0003g0080 a0001c0001t0003g0087 a0001c0001t0003g0011 a0001c0001t0003g0080 a0001c0001t0003g0087	7	HG02155.hp1 HG02723.hp1 HG02818.hp1 others(4): Show HG02155.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1	intron_variant	MODIFIER	c.466+883A>T c.466+883A>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48264800
chrX:48264817	G G	A A	88	a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 others(85): Show a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0006g0003 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0003c0006t0003g0003 a0003c0006t0003g0076 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0007c0007t0003g0118 a0008c0008t0009g0125	187	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(184): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18945.hp1 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18972.hp1 NA18973.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19058.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19067.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.466+900G>A c.466+900G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48264817
chrX:48265382	ATT ATT	A A	1	a0001c0001t0003g0085 a0001c0001t0003g0085	1	HG01981.hp1 HG01981.hp1	intron_variant	MODIFIER	c.467-903_467-902del others(2): Show c.467-903_467-902delTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	48265382
chrX:48265530	ATTACGTT others(7): Show ATTACGTTCGTTATC	A A	48	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(45): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0004c0004t0002g0002 a0004c0004t0002g0016 a0008c0008t0009g0125	106	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.467-754_467-741del others(14): Show c.467-754_467-741delACGTTCGTTATCTT	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	48265530
chrX:48265539	G G	A A	2	a0001c0002t0001g0031 a0001c0002t0001g0088 a0001c0002t0001g0031 a0001c0002t0001g0088	3	HG01884.hp1 HG02280.hp1 HG02630.hp2 HG01884.hp1 HG02280.hp1 HG02630.hp2	intron_variant	MODIFIER	c.467-748G>A c.467-748G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265539
chrX:48265574	G G	A A	148	a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 others(145): Show a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0006g0003 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0001c0002t0001g0001 a0001c0002t0001g0005 a0001c0002t0001g0007 a0001c0002t0001g0009 a0001c0002t0001g0012 a0001c0002t0001g0013 a0001c0002t0001g0017 a0001c0002t0001g0018 a0001c0002t0001g0019 a0001c0002t0001g0021 a0001c0002t0001g0029 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0035 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0049 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0091 a0001c0002t0001g0092 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0096 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0001g0100 a0001c0002t0001g0102 a0001c0002t0001g0103 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0110 a0001c0002t0001g0111 a0001c0002t0001g0112 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0116 a0001c0002t0001g0121 a0001c0002t0001g0123 a0001c0002t0001g0130 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0133 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0136 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0008g0030 a0001c0002t0014g0090 a0001c0002t0015g0115 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0003c0006t0003g0003 a0003c0006t0003g0076 a0004c0004t0002g0002 a0004c0004t0002g0016 a0005c0005t0001g0001 a0005c0005t0001g0017 a0006c0009t0004g0015 a0007c0007t0003g0118 a0008c0008t0009g0125	329	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(326): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.467-713G>A c.467-713G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265574
chrX:48265606	A A	G G	28	a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 others(25): Show a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0006g0003 a0003c0006t0003g0003 a0003c0006t0003g0076 a0007c0007t0003g0118	66	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(63): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp1 HG01069.hp1 HG01071.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02135.hp1 HG02155.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02723.hp1 HG02818.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 NA18943.hp1 NA18948.hp1 NA18950.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18968.hp1 NA18969.hp1 NA18972.hp1 NA18973.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp2 NA18989.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19005.hp1 NA19006.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19090.hp1	intron_variant	MODIFIER	c.467-681A>G c.467-681A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265606
chrX:48265610	A A	C C	1	a0001c0002t0001g0103 a0001c0002t0001g0103	1	HG03654.hp1 HG03654.hp1	intron_variant	MODIFIER	c.467-677A>C c.467-677A>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265610
chrX:48265611	T T	G G	1	a0001c0002t0001g0107 a0001c0002t0001g0107	1	NA18973.hp2 NA18973.hp2	intron_variant	MODIFIER	c.467-676T>G c.467-676T>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265611
chrX:48265864	G G	A A	59	a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 others(56): Show a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0008c0008t0009g0125	120	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(117): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02258.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18969.hp2 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18987.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19078.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.467-423G>A c.467-423G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265864
chrX:48265916	TC TC	T T	1	a0001c0001t0002g0061 a0001c0001t0002g0061	1	NA18942.hp1 NA18942.hp1	intron_variant	MODIFIER	c.467-365delC c.467-365delC	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	48265916
chrX:48265922	CA CA	C C	2	a0001c0001t0003g0028 a0001c0001t0003g0086 a0001c0001t0003g0028 a0001c0001t0003g0086	3	NA18981.hp2 NA18998.hp2 NA19000.hp1 NA18981.hp2 NA18998.hp2 NA19000.hp1	intron_variant	MODIFIER	c.467-359delA c.467-359delA	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7	INFO_REALIGN_3_PRIME	chrX	48265922
chrX:48265934	G G	C C	1	a0001c0002t0001g0113 a0001c0002t0001g0113	1	HG00323.hp2 HG00323.hp2	intron_variant	MODIFIER	c.467-353G>C c.467-353G>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265934
chrX:48265936	G G	A A	88	a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 others(85): Show a0001c0001t0001g0037 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0036 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0048 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0020 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0083 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0117 a0001c0001t0003g0119 a0001c0001t0003g0122 a0001c0001t0005g0002 a0001c0001t0005g0006 a0001c0001t0005g0010 a0001c0001t0005g0060 a0001c0001t0005g0124 a0001c0001t0005g0129 a0001c0001t0006g0003 a0001c0001t0010g0127 a0001c0001t0011g0004 a0001c0001t0012g0004 a0001c0001t0013g0070 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0040 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0003c0006t0003g0003 a0003c0006t0003g0076 a0004c0004t0002g0002 a0004c0004t0002g0016 a0006c0009t0004g0015 a0007c0007t0003g0118 a0008c0008t0009g0125	187	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(184): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01109.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01433.hp1 HG01516.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02135.hp1 HG02155.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02970.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18945.hp1 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18959.hp1 NA18960.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18972.hp1 NA18973.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp1 NA18981.hp2 NA18984.hp1 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19058.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19067.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1 NA21309.hp2	intron_variant	MODIFIER	c.467-351G>A c.467-351G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265936
chrX:48265978	A A	G G	1	a0001c0001t0003g0122 a0001c0001t0003g0122	1	NA18968.hp1 NA18968.hp1	intron_variant	MODIFIER	c.467-309A>G c.467-309A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48265978
chrX:48266116	A A	T T	5	a0001c0002t0001g0005 a0001c0002t0001g0032 a0001c0002t0001g0089 others(2): Show a0001c0002t0001g0005 a0001c0002t0001g0032 a0001c0002t0001g0089 a0001c0002t0001g0100 a0001c0002t0001g0134	14	HG00408.hp1 HG00558.hp1 HG00597.hp2 others(11): Show HG00408.hp1 HG00558.hp1 HG00597.hp2 NA18940.hp1 NA18949.hp1 NA18970.hp1 NA18975.hp1 NA18980.hp2 NA18986.hp1 NA19012.hp1 NA19065.hp1 NA19068.hp1 NA19078.hp2 NA19087.hp2	intron_variant	MODIFIER	c.467-171A>T c.467-171A>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48266116
chrX:48266162	A A	G G	1	a0002c0003t0004g0053 a0002c0003t0004g0053	1	NA19240.hp1 NA19240.hp1	intron_variant	MODIFIER	c.467-125A>G c.467-125A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48266162
chrX:48266256	A A	C C	10	a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 others(7): Show a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0006c0009t0004g0015	13	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(10): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.467-31A>C c.467-31A>C	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	6/7		chrX	48266256
chrX:48266615	A A	T T	1	a0001c0002t0001g0105 a0001c0002t0001g0105	1	HG03579.hp1 HG03579.hp1	intron_variant	MODIFIER	c.4+224A>T c.4+224A>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	7/7		chrX	48266615
chrX:48266620	A A	G G	13	a0001c0001t0002g0004 a0001c0001t0002g0024 a0001c0001t0002g0036 others(10): Show a0001c0001t0002g0004 a0001c0001t0002g0024 a0001c0001t0002g0036 a0001c0001t0002g0042 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0061 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0002g0074 a0001c0001t0002g0128 a0001c0001t0011g0004 a0001c0001t0012g0004	25	HG00558.hp2 HG00621.hp1 HG01256.hp1 others(22): Show HG00558.hp2 HG00621.hp1 HG01256.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp2 NA18942.hp1 NA18953.hp1 NA18960.hp1 NA18963.hp2 NA18975.hp2 NA18977.hp1 NA18987.hp1 NA19002.hp2 NA19003.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19054.hp2 NA19063.hp1 NA19065.hp2 NA19072.hp1 NA19085.hp1 NA19087.hp1 NA19089.hp1	intron_variant	MODIFIER	c.4+229A>G c.4+229A>G	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	7/7		chrX	48266620
chrX:48266716	C C	T T	1	a0001c0001t0005g0129 a0001c0001t0005g0129	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.5-138C>T c.5-138C>T	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	7/7		chrX	48266716
chrX:48266818	G G	A A	11	a0001c0001t0010g0127 a0002c0003t0004g0015 a0002c0003t0004g0022 others(8): Show a0001c0001t0010g0127 a0002c0003t0004g0015 a0002c0003t0004g0022 a0002c0003t0004g0023 a0002c0003t0004g0050 a0002c0003t0004g0051 a0002c0003t0004g0052 a0002c0003t0004g0053 a0002c0003t0007g0015 a0002c0003t0007g0054 a0006c0009t0004g0015	14	HG01891.hp2 HG02258.hp1 HG02451.hp1 others(11): Show HG01891.hp2 HG02258.hp1 HG02451.hp1 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02970.hp2 HG03209.hp1 HG03486.hp2 HG06807.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.5-36G>A c.5-36G>A	SSX1	ENSG00000126752.8	transcript	ENST00000376919.4	protein_coding	7/7		chrX	48266818

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JoGo Online Haplotype Explorer SSX1_chrX_48250392_48272444

JoGo Local Haplotype Explorer (on iGV) SSX1_chrX_48250392_48272444

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 8)

CCoding Level Haplotype Info (Total: 9)

TTranscript Level Haplotype Info (Total: 15)

GGenebody Level Haplotype Info (Total: 141)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 9)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 21)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 153)

Haplotype Details by Sample (Haploid Level) (Total: 339)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 7)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (Exon) (Total: 21)

GGenebody Level Haplotype Variants (Intron) (Total: 177)

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Annotation (Repeats)

Annotation (SNP Array)