Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	219431
ensemblid	ENSG00000174982.4
hgncid	15183
symbol	OR4S2
name	olfactory receptor family 4 subfamily S member 2
refseq_nuc	NM_001004059.3
refseq_prot	NP_001004059.2
ensembl_nuc	ENST00000641692.1
ensembl_prot	ENSP00000493389.1
mane_status	MANE Select
chr	chr11
start	55648327
end	55652854
strand	+
ver	v1.2
region	chr11:55648327-55652854
region5000	chr11:55643327-55657854
regionname0	OR4S2_chr11_55648327_55652854
regionname5000	OR4S2_chr11_55643327_55657854

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	311	141	46	20	57	3	13	49	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0002	0/0	311	65	15	6	31	4	9	25	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0003	0/0	311	6	6	0	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0004	0/0	311	4	4	0	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0005	0/0	311	3	1	1	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0006	0/0	311	3	3	0	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0007	0/0	311	2	0	0	0	2	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0008	0/0	311	2	2	0	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0009	0/0	311	1	1	0	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0010	0/0	311	1	0	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	936	137	43	20	56	3	13	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0002	0/0	936	64	15	6	30	4	9	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0003	0/0	936	6	6	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0004	0/0	936	4	4	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0005	0/0	936	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0006	0/0	936	3	1	1	0	1	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0007	0/0	936	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0008	0/0	936	2	2	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0009	0/0	936	2	0	0	0	2	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0010	0/0	936	1	0	1	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0011	0/0	936	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0012	0/0	936	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
c0013	0/0	936	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	1276	147	34	19	70	7	17	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0002	0/1	1276	30	5	4	17	0	3	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0003	1/0	1276	23	17	3	0	2	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0004	0/0	1276	6	6	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0005	0/0	1276	5	5	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0006	0/0	1276	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0007	0/0	1276	3	1	1	0	1	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0008	0/0	1276	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0009	0/0	1276	2	2	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0010	0/0	1276	2	0	0	0	0	2	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0011	0/0	1276	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0012	0/0	1276	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0013	0/0	1276	1	0	1	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
t0014	0/0	1276	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	73	38	11	15	4	3	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0002	0/0	64	14	8	33	1	8	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0003	0/0	40	13	3	17	2	5	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0004	0/0	25	1	4	14	2	4	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0005	0/0	8	0	0	8	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0006	0/0	6	6	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0007	0/0	4	4	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0008	0/0	3	1	1	0	1	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0009	0/0	2	0	1	0	0	1	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0010	0/0	1	0	0	0	0	1	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0011	0/0	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
g0012	0/0	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	936	137	43	20	56	3	13	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0007	0/0	936	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0013	0/0	936	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0002c0002	0/0	936	64	15	6	30	4	9	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0002c0012	0/0	936	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0003c0003	0/0	936	6	6	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0004c0004	0/0	936	4	4	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0005c0006	0/0	936	3	1	1	0	1	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0006c0005	0/0	936	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0007c0009	0/0	936	2	0	0	0	2	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0008c0008	0/0	936	2	2	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0009c0011	0/0	936	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0010c0010	0/0	936	1	0	1	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	2211	78	18	13	38	1	8	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0001t0002	0/1	2211	30	5	4	17	0	3	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0001t0003	1/0	2211	23	17	3	0	2	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0001t0009	0/0	2211	2	2	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0001t0010	0/0	2211	2	0	0	0	0	2	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0001t0012	0/0	2211	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0001t0014	0/0	2211	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0007t0001	0/0	2211	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0001c0013t0001	0/0	2211	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0002c0002t0001	0/0	2211	56	7	6	30	4	9	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0002c0002t0005	0/0	2211	5	5	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0002c0002t0006	0/0	2211	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0002c0012t0001	0/0	2211	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0003c0003t0004	0/0	2211	6	6	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0004c0004t0001	0/0	2211	4	4	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0005c0006t0007	0/0	2211	3	1	1	0	1	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0006c0005t0008	0/0	2211	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0007c0009t0001	0/0	2211	2	0	0	0	2	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0008c0008t0001	0/0	2211	2	2	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0009c0011t0011	0/0	2211	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854
a0010c0010t0013	0/0	2211	1	0	1	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	copy fasta	chr11	55643327	55657854

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	16	6	4	6	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0001g0002	0/0	58	12	8	31	1	6	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0001g0009	0/0	2	0	1	0	0	1	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0001g0010	0/0	1	0	0	0	0	1	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0001g0011	0/0	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0002g0001	0/1	22	5	4	9	0	3	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0002g0005	0/0	8	0	0	8	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0003g0001	1/0	23	17	3	0	2	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0009g0002	0/0	2	2	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0010g0002	0/0	2	0	0	0	0	2	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0012g0001	0/0	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0001t0014g0002	0/0	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0007t0001g0001	0/0	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0001c0013t0001g0002	0/0	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0002c0002t0001g0003	0/0	32	6	2	17	2	5	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0002c0002t0001g0004	0/0	24	1	4	13	2	4	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0002c0002t0005g0003	0/0	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0002c0002t0005g0007	0/0	4	4	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0002c0002t0006g0001	0/0	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0002c0012t0001g0004	0/0	1	0	0	1	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0003c0003t0004g0006	0/0	6	6	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0004c0004t0001g0003	0/0	4	4	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0005c0006t0007g0008	0/0	3	1	1	0	1	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0006c0005t0008g0001	0/0	3	3	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0007c0009t0001g0001	0/0	2	0	0	0	2	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0008c0008t0001g0003	0/0	2	2	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0009c0011t0011g0012	0/0	1	1	0	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
a0010c0010t0013g0003	0/0	1	0	1	0	0	0	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0002	c0002	t0001	g0004	EUR	GBR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00099	hp2	a0005	c0006	t0007	g0008	EUR	GBR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00597	hp1	a0002	c0002	t0001	g0004	EAS	CHS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00597	hp2	a0002	c0002	t0001	g0003	EAS	CHS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00609	hp1	a0001	c0001	t0002	g0001	EAS	CHS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00609	hp2	a0002	c0002	t0001	g0004	EAS	CHS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00733	hp1	a0001	c0001	t0002	g0001	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00733	hp2	a0002	c0002	t0001	g0003	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG00738	hp2	a0001	c0001	t0003	g0001	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01070	hp1	a0002	c0002	t0001	g0004	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01070	hp2	a0001	c0001	t0001	g0002	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01071	hp1	a0002	c0002	t0001	g0004	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01071	hp2	a0002	c0002	t0001	g0004	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01081	hp1	a0001	c0001	t0001	g0002	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01081	hp2	a0001	c0001	t0002	g0001	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01109	hp1	a0010	c0010	t0013	g0003	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01109	hp2	a0002	c0002	t0001	g0004	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01243	hp1	a0001	c0001	t0001	g0002	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01243	hp2	a0001	c0001	t0003	g0001	AMR	PUR	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01261	hp1	a0001	c0001	t0003	g0001	AMR	CLM	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01261	hp2	a0001	c0001	t0001	g0002	AMR	CLM	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01346	hp2	a0001	c0001	t0002	g0001	AMR	CLM	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01358	hp1	a0001	c0001	t0001	g0002	AMR	CLM	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01358	hp2	a0001	c0001	t0002	g0001	AMR	CLM	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01433	hp1	a0001	c0001	t0001	g0002	AMR	CLM	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01433	hp2	a0005	c0006	t0007	g0008	AMR	CLM	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01515	hp1	a0007	c0009	t0001	g0001	EUR	IBS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01515	hp2	a0001	c0001	t0003	g0001	EUR	IBS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01516	hp1	a0002	c0002	t0001	g0003	EUR	IBS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01516	hp2	a0001	c0001	t0001	g0002	EUR	IBS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01517	hp1	a0007	c0009	t0001	g0001	EUR	IBS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01517	hp2	a0002	c0002	t0001	g0003	EUR	IBS	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01884	hp1	a0001	c0001	t0001	g0002	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01891	hp1	a0001	c0001	t0001	g0002	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01891	hp2	a0006	c0005	t0008	g0001	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01981	hp1	a0001	c0001	t0001	g0009	AMR	PEL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01981	hp2	a0001	c0001	t0001	g0002	AMR	PEL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01993	hp1	a0002	c0002	t0001	g0003	AMR	PEL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG01993	hp2	a0001	c0001	t0001	g0002	AMR	PEL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02015	hp1	a0002	c0002	t0001	g0003	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02015	hp2	a0002	c0002	t0001	g0003	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02027	hp1	a0001	c0001	t0001	g0002	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02027	hp2	a0001	c0001	t0001	g0011	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02040	hp1	a0002	c0002	t0001	g0004	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02040	hp2	a0001	c0001	t0002	g0005	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02055	hp1	a0001	c0001	t0001	g0002	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02056	hp1	a0001	c0001	t0001	g0002	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02056	hp2	a0001	c0001	t0002	g0001	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02083	hp1	a0001	c0001	t0001	g0002	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02083	hp2	a0001	c0001	t0014	g0002	EAS	KHV	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02145	hp1	a0002	c0002	t0005	g0003	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02145	hp2	a0009	c0011	t0011	g0012	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02451	hp1	a0001	c0001	t0003	g0001	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02451	hp2	a0001	c0001	t0001	g0002	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02602	hp1	a0001	c0001	t0001	g0002	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02602	hp2	a0002	c0002	t0001	g0004	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02615	hp1	a0001	c0001	t0002	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02615	hp2	a0002	c0002	t0005	g0007	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02630	hp1	a0001	c0001	t0001	g0002	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02630	hp2	a0002	c0002	t0006	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02698	hp1	a0002	c0002	t0001	g0004	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02698	hp2	a0001	c0001	t0002	g0001	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02717	hp1	a0002	c0002	t0005	g0007	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02717	hp2	a0004	c0004	t0001	g0003	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02723	hp1	a0002	c0002	t0001	g0003	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02723	hp2	a0001	c0001	t0012	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02738	hp1	a0002	c0002	t0001	g0003	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02738	hp2	a0001	c0001	t0001	g0010	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02809	hp1	a0001	c0007	t0001	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02809	hp2	a0001	c0001	t0001	g0002	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02818	hp1	a0001	c0001	t0002	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02818	hp2	a0001	c0001	t0003	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02886	hp1	a0001	c0001	t0003	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02886	hp2	a0001	c0001	t0002	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02895	hp1	a0001	c0001	t0001	g0002	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02895	hp2	a0001	c0001	t0003	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02896	hp1	a0001	c0001	t0003	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02896	hp2	a0003	c0003	t0004	g0006	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02897	hp1	a0001	c0001	t0003	g0001	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02897	hp2	a0001	c0001	t0001	g0002	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02965	hp1	a0001	c0001	t0003	g0001	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02965	hp2	a0006	c0005	t0008	g0001	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02970	hp1	a0001	c0001	t0003	g0001	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02970	hp2	a0003	c0003	t0004	g0006	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02976	hp1	a0001	c0007	t0001	g0001	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02976	hp2	a0008	c0008	t0001	g0003	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03017	hp1	a0002	c0002	t0001	g0004	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03017	hp2	a0002	c0002	t0001	g0003	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03041	hp1	a0004	c0004	t0001	g0003	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03041	hp2	a0008	c0008	t0001	g0003	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03098	hp1	a0004	c0004	t0001	g0003	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03098	hp2	a0003	c0003	t0004	g0006	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03130	hp1	a0002	c0002	t0001	g0003	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03130	hp2	a0001	c0001	t0009	g0002	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03139	hp1	a0006	c0005	t0008	g0001	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03139	hp2	a0001	c0001	t0003	g0001	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03209	hp1	a0001	c0001	t0003	g0001	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03209	hp2	a0001	c0001	t0001	g0001	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03225	hp1	a0001	c0001	t0003	g0001	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03225	hp2	a0001	c0001	t0003	g0001	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03239	hp1	a0001	c0001	t0001	g0002	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03239	hp2	a0002	c0002	t0001	g0003	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03453	hp1	a0002	c0002	t0006	g0001	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03453	hp2	a0002	c0002	t0005	g0007	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03486	hp1	a0002	c0002	t0005	g0007	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03486	hp2	a0002	c0002	t0001	g0003	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03491	hp1	a0001	c0001	t0001	g0002	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03491	hp2	a0001	c0001	t0002	g0001	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03492	hp1	a0001	c0001	t0002	g0001	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03492	hp2	a0001	c0001	t0001	g0002	SAS	PJL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03516	hp1	a0001	c0001	t0003	g0001	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03516	hp2	a0001	c0001	t0003	g0001	AFR	ESN	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03540	hp1	a0001	c0001	t0001	g0002	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03540	hp2	a0002	c0002	t0001	g0003	AFR	GWD	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03579	hp1	a0003	c0003	t0004	g0006	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03579	hp2	a0002	c0002	t0006	g0001	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03831	hp1	a0001	c0001	t0010	g0002	SAS	BEB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03831	hp2	a0002	c0002	t0001	g0003	SAS	BEB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG04184	hp1	a0001	c0001	t0001	g0002	SAS	BEB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG04184	hp2	a0001	c0001	t0001	g0009	SAS	BEB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG04199	hp1	a0002	c0002	t0001	g0003	SAS	STU	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG04199	hp2	a0002	c0002	t0001	g0004	SAS	STU	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG04204	hp1	a0001	c0001	t0010	g0002	SAS	STU	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG04204	hp2	a0001	c0001	t0001	g0002	SAS	STU	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18522	hp1	a0002	c0002	t0001	g0003	AFR	YRI	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18522	hp2	a0001	c0001	t0001	g0001	AFR	YRI	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18941	hp1	a0001	c0001	t0002	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18941	hp2	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18944	hp1	a0001	c0001	t0002	g0005	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18944	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18945	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18945	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18948	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18948	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18951	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18953	hp1	a0001	c0001	t0002	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18953	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18954	hp1	a0001	c0001	t0002	g0005	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18954	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18957	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18957	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18959	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18959	hp2	a0001	c0001	t0002	g0005	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18961	hp1	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18961	hp2	a0001	c0001	t0002	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18963	hp1	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18963	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18967	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18967	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18970	hp1	a0001	c0001	t0002	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18970	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18973	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18973	hp2	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18974	hp1	a0001	c0001	t0002	g0005	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18974	hp2	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18975	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18975	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18981	hp1	a0001	c0001	t0002	g0005	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18981	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18982	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18982	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18986	hp1	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18986	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18987	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18987	hp2	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18988	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18990	hp1	a0002	c0012	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18995	hp1	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA18995	hp2	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19001	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19001	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19004	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19004	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19011	hp1	a0001	c0001	t0002	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19011	hp2	a0001	c0001	t0002	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19030	hp1	a0001	c0001	t0002	g0001	AFR	LWK	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19030	hp2	a0001	c0001	t0003	g0001	AFR	LWK	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19043	hp1	a0001	c0001	t0003	g0001	AFR	LWK	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19043	hp2	a0002	c0002	t0001	g0003	AFR	LWK	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19059	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19059	hp2	a0001	c0001	t0002	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19062	hp1	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19062	hp2	a0001	c0001	t0002	g0005	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19064	hp1	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19064	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19066	hp2	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19067	hp1	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19067	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19072	hp1	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19072	hp2	a0001	c0001	t0002	g0005	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19083	hp1	a0001	c0013	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19083	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19084	hp1	a0002	c0002	t0001	g0004	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19084	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19087	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19089	hp1	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19089	hp2	a0001	c0001	t0001	g0002	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19091	hp2	a0002	c0002	t0001	g0003	EAS	JPT	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19240	hp1	a0001	c0001	t0001	g0002	AFR	YRI	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA20129	hp1	a0001	c0001	t0001	g0002	AFR	ASW	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA20129	hp2	a0005	c0006	t0007	g0008	AFR	ASW	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA20752	hp1	a0001	c0001	t0003	g0001	EUR	TSI	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA20752	hp2	a0002	c0002	t0001	g0004	EUR	TSI	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02109	hp1	a0003	c0003	t0004	g0006	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02109	hp2	a0001	c0001	t0002	g0001	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02559	hp1	a0001	c0001	t0001	g0002	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03471	hp1	a0001	c0007	t0001	g0001	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG03471	hp2	a0001	c0001	t0003	g0001	AFR	MSL	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG06807	hp1	a0003	c0003	t0004	g0006	AFR	USA	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
HG06807	hp2	a0001	c0001	t0009	g0002	AFR	USA	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA20300	hp1	a0002	c0002	t0001	g0004	AFR	USA	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
NA20300	hp2	a0004	c0004	t0001	g0003	AFR	USA	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
homoSapiens_chm13v2	hp1	a0001	c0001	t0002	g0001	REF	REF	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854
homoSapiens_grch38	hp1	a0001	c0001	t0003	g0001	REF	REF	OR4S2_chr11_55643327_55657854	OR4S2	chr11	55643327	55657854

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr11:55651117	T T	A A	2	a0004 a0010 a0004 a0010	5	HG01109.hp1 HG02717.hp2 HG03041.hp1 others(2): Show HG01109.hp1 HG02717.hp2 HG03041.hp1 HG03098.hp1 NA20300.hp2	missense_variant	MODERATE	c.214T>A c.214T>A	p.Ser72Thr p.Ser72Thr	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	474/2211	214/936	72/311	chr11	55651117
chr11:55651142	T T	C C	1	a0010 a0010	1	HG01109.hp1 HG01109.hp1	missense_variant	MODERATE	c.239T>C c.239T>C	p.Ile80Thr p.Ile80Thr	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	499/2211	239/936	80/311	chr11	55651142
chr11:55651144	G G	A A	2	a0003 a0009 a0003 a0009	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	missense_variant	MODERATE	c.241G>A c.241G>A	p.Val81Ile p.Val81Ile	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	501/2211	241/936	81/311	chr11	55651144
chr11:55651201	T T	C C	1	a0006 a0006	3	HG01891.hp2 HG02965.hp2 HG03139.hp1 HG01891.hp2 HG02965.hp2 HG03139.hp1	missense_variant	MODERATE	c.298T>C c.298T>C	p.Phe100Leu p.Phe100Leu	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	558/2211	298/936	100/311	chr11	55651201
chr11:55651217	T T	C C	4	a0002 a0004 a0008 others(1): Show a0002 a0004 a0008 a0010	72	HG00099.hp1 HG00597.hp1 HG00597.hp2 others(69): Show HG00099.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00733.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01109.hp1 HG01109.hp2 HG01516.hp1 HG01517.hp2 HG01993.hp1 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02145.hp1 HG02602.hp2 HG02615.hp2 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03579.hp2 HG03831.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp1 NA18941.hp2 NA18954.hp2 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18967.hp2 NA18973.hp2 NA18974.hp2 NA18975.hp2 NA18982.hp2 NA18986.hp1 NA18987.hp2 NA18990.hp1 NA18995.hp1 NA18995.hp2 NA19001.hp2 NA19043.hp2 NA19062.hp1 NA19064.hp1 NA19066.hp2 NA19072.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19091.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2	missense_variant	MODERATE	c.314T>C c.314T>C	p.Phe105Ser p.Phe105Ser	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	574/2211	314/936	105/311	chr11	55651217
chr11:55651487	T T	G G	1	a0005 a0005	3	HG00099.hp2 HG01433.hp2 NA20129.hp2 HG00099.hp2 HG01433.hp2 NA20129.hp2	missense_variant	MODERATE	c.584T>G c.584T>G	p.Val195Gly p.Val195Gly	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	844/2211	584/936	195/311	chr11	55651487
chr11:55651541	T T	A A	1	a0009 a0009	1	HG02145.hp2 HG02145.hp2	missense_variant	MODERATE	c.638T>A c.638T>A	p.Leu213Gln p.Leu213Gln	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	898/2211	638/936	213/311	chr11	55651541
chr11:55651597	C C	T T	3	a0004 a0008 a0010 a0004 a0008 a0010	7	HG01109.hp1 HG02717.hp2 HG02976.hp2 others(4): Show HG01109.hp1 HG02717.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 NA20300.hp2	missense_variant	MODERATE	c.694C>T c.694C>T	p.Arg232Cys p.Arg232Cys	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	954/2211	694/936	232/311	chr11	55651597
chr11:55651675	C C	T T	1	a0007 a0007	2	HG01515.hp1 HG01517.hp1 HG01515.hp1 HG01517.hp1	missense_variant	MODERATE	c.772C>T c.772C>T	p.Arg258Cys p.Arg258Cys	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	1032/2211	772/936	258/311	chr11	55651675

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr11:55651398	C C	A A	1	a0001c0013 a0001c0013	1	NA19083.hp1 NA19083.hp1	synonymous_variant	LOW	c.495C>A c.495C>A	p.Pro165Pro p.Pro165Pro	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	755/2211	495/936	165/311	chr11	55651398
chr11:55651638	C C	T T	1	a0002c0012 a0002c0012	1	NA18990.hp1 NA18990.hp1	synonymous_variant	LOW	c.735C>T c.735C>T	p.Val245Val p.Val245Val	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	995/2211	735/936	245/311	chr11	55651638
chr11:55651671	C C	T T	1	a0001c0007 a0001c0007	3	HG02809.hp1 HG02976.hp1 HG03471.hp1 HG02809.hp1 HG02976.hp1 HG03471.hp1	synonymous_variant	LOW	c.768C>T c.768C>T	p.Tyr256Tyr p.Tyr256Tyr	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	1028/2211	768/936	256/311	chr11	55651671

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr11:55648409	G G	T T	1	a0006c0005t0008 a0006c0005t0008	3	HG01891.hp2 HG02965.hp2 HG03139.hp1 HG01891.hp2 HG02965.hp2 HG03139.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-178G>T c.-178G>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/2		chr11	55648409
chr11:55648427	C C	T T	1	a0005c0006t0007 a0005c0006t0007	3	HG00099.hp2 HG01433.hp2 NA20129.hp2 HG00099.hp2 HG01433.hp2 NA20129.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-160C>T c.-160C>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/2		chr11	55648427
chr11:55648456	T T	C C	2	a0003c0003t0004 a0009c0011t0011 a0003c0003t0004 a0009c0011t0011	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	5_prime_UTR_variant	MODIFIER	c.-131T>C c.-131T>C	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/2	2448	chr11	55648456
chr11:55648483	A A	C C	19	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 a0001c0007t0001 a0001c0013t0001 a0002c0002t0001 a0002c0002t0005 a0002c0002t0006 a0002c0012t0001 a0003c0003t0004 a0004c0004t0001 a0005c0006t0007 a0006c0005t0008 a0007c0009t0001 a0008c0008t0001 a0009c0011t0011 a0010c0010t0013	204	HG00099.hp1 HG00099.hp2 HG00597.hp1 others(201): Show HG00099.hp1 HG00099.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01243.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03831.hp1 HG03831.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18941.hp1 NA18941.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18967.hp1 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA19001.hp1 NA19001.hp2 NA19004.hp1 NA19004.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19059.hp1 NA19059.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19072.hp1 NA19072.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 homoSapiens_chm13v2.hp1	5_prime_UTR_variant	MODIFIER	c.-104A>C c.-104A>C	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/2	2421	chr11	55648483
chr11:55651991	T T	A A	1	a0002c0002t0005 a0002c0002t0005	5	HG02145.hp1 HG02615.hp2 HG02717.hp1 others(2): Show HG02145.hp1 HG02615.hp2 HG02717.hp1 HG03453.hp2 HG03486.hp1	3_prime_UTR_variant	MODIFIER	c.152T>A c.152T>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	152	chr11	55651991
chr11:55652008	T T	C C	1	a0001c0001t0009 a0001c0001t0009	2	HG03130.hp2 HG06807.hp2 HG03130.hp2 HG06807.hp2	3_prime_UTR_variant	MODIFIER	c.169T>C c.169T>C	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	169	chr11	55652008
chr11:55652118	G G	C C	1	a0001c0001t0012 a0001c0001t0012	1	HG02723.hp2 HG02723.hp2	3_prime_UTR_variant	MODIFIER	c.279G>C c.279G>C	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	279	chr11	55652118
chr11:55652183	A A	G G	1	a0001c0001t0002 a0001c0001t0002	30	HG00609.hp1 HG00733.hp1 HG01081.hp2 others(27): Show HG00609.hp1 HG00733.hp1 HG01081.hp2 HG01346.hp2 HG01358.hp2 HG02040.hp2 HG02056.hp2 HG02109.hp2 HG02615.hp1 HG02698.hp2 HG02818.hp1 HG02886.hp2 HG03491.hp2 HG03492.hp1 NA18941.hp1 NA18944.hp1 NA18953.hp1 NA18954.hp1 NA18959.hp2 NA18961.hp2 NA18970.hp1 NA18974.hp1 NA18981.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19059.hp2 NA19062.hp2 NA19072.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.344A>G c.344A>G	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	344	chr11	55652183
chr11:55652279	C C	T T	1	a0002c0002t0006 a0002c0002t0006	3	HG02630.hp2 HG03453.hp1 HG03579.hp2 HG02630.hp2 HG03453.hp1 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.440C>T c.440C>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	440	chr11	55652279
chr11:55652322	A A	G G	1	a0005c0006t0007 a0005c0006t0007	3	HG00099.hp2 HG01433.hp2 NA20129.hp2 HG00099.hp2 HG01433.hp2 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.483A>G c.483A>G	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	483	chr11	55652322
chr11:55652462	G G	A A	2	a0003c0003t0004 a0009c0011t0011 a0003c0003t0004 a0009c0011t0011	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.623G>A c.623G>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	623	chr11	55652462
chr11:55652467	C C	T T	1	a0001c0001t0014 a0001c0001t0014	1	HG02083.hp2 HG02083.hp2	3_prime_UTR_variant	MODIFIER	c.628C>T c.628C>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	628	chr11	55652467
chr11:55652468	G G	A A	1	a0001c0001t0010 a0001c0001t0010	2	HG03831.hp1 HG04204.hp1 HG03831.hp1 HG04204.hp1	3_prime_UTR_variant	MODIFIER	c.629G>A c.629G>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	629	chr11	55652468
chr11:55652578	T T	A A	1	a0002c0002t0006 a0002c0002t0006	3	HG02630.hp2 HG03453.hp1 HG03579.hp2 HG02630.hp2 HG03453.hp1 HG03579.hp2	3_prime_UTR_variant	MODIFIER	c.739T>A c.739T>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	739	chr11	55652578
chr11:55652644	A A	G G	1	a0003c0003t0004 a0003c0003t0004	6	HG02109.hp1 HG02896.hp2 HG02970.hp2 others(3): Show HG02109.hp1 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.805A>G c.805A>G	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	805	chr11	55652644
chr11:55652832	T T	G G	1	a0010c0010t0013 a0010c0010t0013	1	HG01109.hp1 HG01109.hp1	3_prime_UTR_variant	MODIFIER	c.993T>G c.993T>G	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	2/2	993	chr11	55652832

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr11:55648556	A A	AT AT	2	a0003c0003t0004g0006 a0009c0011t0011g0012 a0003c0003t0004g0006 a0009c0011t0011g0012	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-37+15dupT c.-37+15dupT	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr11	55648556
chr11:55648556	AT AT	A A	8	a0002c0002t0001g0003 a0002c0002t0001g0004 a0002c0002t0005g0003 others(5): Show a0002c0002t0001g0003 a0002c0002t0001g0004 a0002c0002t0005g0003 a0002c0002t0005g0007 a0002c0012t0001g0004 a0004c0004t0001g0003 a0008c0008t0001g0003 a0010c0010t0013g0003	69	HG00099.hp1 HG00597.hp1 HG00597.hp2 others(66): Show HG00099.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00733.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01109.hp1 HG01109.hp2 HG01516.hp1 HG01517.hp2 HG01993.hp1 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02145.hp1 HG02602.hp2 HG02615.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03831.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp1 NA18941.hp2 NA18954.hp2 NA18957.hp2 NA18961.hp1 NA18963.hp1 NA18967.hp2 NA18973.hp2 NA18974.hp2 NA18975.hp2 NA18982.hp2 NA18986.hp1 NA18987.hp2 NA18990.hp1 NA18995.hp1 NA18995.hp2 NA19001.hp2 NA19043.hp2 NA19062.hp1 NA19064.hp1 NA19066.hp2 NA19072.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19089.hp1 NA19091.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2	intron_variant	MODIFIER	c.-37+15delT c.-37+15delT	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr11	55648556
chr11:55648571	C C	T T	2	a0003c0003t0004g0006 a0009c0011t0011g0012 a0003c0003t0004g0006 a0009c0011t0011g0012	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-37+21C>T c.-37+21C>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55648571
chr11:55648739	G G	A A	2	a0002c0002t0001g0004 a0002c0012t0001g0004 a0002c0002t0001g0004 a0002c0012t0001g0004	25	HG00099.hp1 HG00597.hp1 HG00609.hp2 others(22): Show HG00099.hp1 HG00597.hp1 HG00609.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01109.hp2 HG02040.hp1 HG02602.hp2 HG02698.hp1 HG03017.hp1 HG04199.hp2 NA18941.hp2 NA18963.hp1 NA18973.hp2 NA18974.hp2 NA18987.hp2 NA18990.hp1 NA18995.hp1 NA18995.hp2 NA19062.hp1 NA19066.hp2 NA19084.hp1 NA20300.hp1 NA20752.hp2	intron_variant	MODIFIER	c.-37+189G>A c.-37+189G>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55648739
chr11:55649011	GA GA	G G	7	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0011 others(4): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0009g0002 a0001c0001t0010g0002 a0001c0001t0014g0002 a0001c0013t0001g0002	66	HG01070.hp2 HG01081.hp1 HG01243.hp1 others(63): Show HG01070.hp2 HG01081.hp1 HG01243.hp1 HG01261.hp2 HG01358.hp1 HG01433.hp1 HG01516.hp2 HG01884.hp1 HG01891.hp1 HG01981.hp2 HG01993.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02083.hp1 HG02083.hp2 HG02451.hp2 HG02559.hp1 HG02602.hp1 HG02630.hp1 HG02738.hp2 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG03130.hp2 HG03239.hp1 HG03491.hp1 HG03492.hp2 HG03540.hp1 HG03831.hp1 HG04184.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18953.hp2 NA18957.hp1 NA18959.hp1 NA18963.hp2 NA18967.hp1 NA18970.hp2 NA18973.hp1 NA18975.hp1 NA18981.hp2 NA18982.hp1 NA18986.hp2 NA18987.hp1 NA18988.hp2 NA19001.hp1 NA19004.hp1 NA19004.hp2 NA19059.hp1 NA19064.hp2 NA19067.hp1 NA19067.hp2 NA19083.hp1 NA19087.hp2 NA19089.hp2 NA19240.hp1 NA20129.hp1	intron_variant	MODIFIER	c.-37+471delA c.-37+471delA	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr11	55649011
chr11:55649170	T T	C C	1	a0001c0001t0001g0010 a0001c0001t0001g0010	1	HG02738.hp2 HG02738.hp2	intron_variant	MODIFIER	c.-37+620T>C c.-37+620T>C	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55649170
chr11:55649186	G G	A A	2	a0003c0003t0004g0006 a0009c0011t0011g0012 a0003c0003t0004g0006 a0009c0011t0011g0012	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-37+636G>A c.-37+636G>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55649186
chr11:55649290	A A	C C	1	a0003c0003t0004g0006 a0003c0003t0004g0006	6	HG02109.hp1 HG02896.hp2 HG02970.hp2 others(3): Show HG02109.hp1 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-37+740A>C c.-37+740A>C	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55649290
chr11:55649650	A A	T T	1	a0009c0011t0011g0012 a0009c0011t0011g0012	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.-37+1100A>T c.-37+1100A>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55649650
chr11:55649699	A A	T T	2	a0003c0003t0004g0006 a0009c0011t0011g0012 a0003c0003t0004g0006 a0009c0011t0011g0012	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-37+1149A>T c.-37+1149A>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55649699
chr11:55649866	A A	C C	2	a0003c0003t0004g0006 a0009c0011t0011g0012 a0003c0003t0004g0006 a0009c0011t0011g0012	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-36-1002A>C c.-36-1002A>C	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55649866
chr11:55650072	A A	G G	1	a0001c0001t0002g0005 a0001c0001t0002g0005	8	HG02040.hp2 NA18944.hp1 NA18954.hp1 others(5): Show HG02040.hp2 NA18944.hp1 NA18954.hp1 NA18959.hp2 NA18974.hp1 NA18981.hp1 NA19062.hp2 NA19072.hp2	intron_variant	MODIFIER	c.-36-796A>G c.-36-796A>G	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55650072
chr11:55650124	G G	GAA GAA	2	a0003c0003t0004g0006 a0009c0011t0011g0012 a0003c0003t0004g0006 a0009c0011t0011g0012	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-36-742_-36-741dup others(2): Show c.-36-742_-36-741dupAA	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1	INFO_REALIGN_3_PRIME	chr11	55650124
chr11:55650130	G G	T T	1	a0009c0011t0011g0012 a0009c0011t0011g0012	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.-36-738G>T c.-36-738G>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55650130
chr11:55650185	G G	A A	1	a0001c0001t0001g0009 a0001c0001t0001g0009	2	HG01981.hp1 HG04184.hp2 HG01981.hp1 HG04184.hp2	intron_variant	MODIFIER	c.-36-683G>A c.-36-683G>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55650185
chr11:55650214	T T	G G	2	a0003c0003t0004g0006 a0009c0011t0011g0012 a0003c0003t0004g0006 a0009c0011t0011g0012	7	HG02109.hp1 HG02145.hp2 HG02896.hp2 others(4): Show HG02109.hp1 HG02145.hp2 HG02896.hp2 HG02970.hp2 HG03098.hp2 HG03579.hp1 HG06807.hp1	intron_variant	MODIFIER	c.-36-654T>G c.-36-654T>G	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55650214
chr11:55650363	C C	T T	1	a0002c0002t0005g0007 a0002c0002t0005g0007	4	HG02615.hp2 HG02717.hp1 HG03453.hp2 others(1): Show HG02615.hp2 HG02717.hp1 HG03453.hp2 HG03486.hp1	intron_variant	MODIFIER	c.-36-505C>T c.-36-505C>T	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55650363
chr11:55650508	T T	A A	1	a0002c0002t0005g0007 a0002c0002t0005g0007	4	HG02615.hp2 HG02717.hp1 HG03453.hp2 others(1): Show HG02615.hp2 HG02717.hp1 HG03453.hp2 HG03486.hp1	intron_variant	MODIFIER	c.-36-360T>A c.-36-360T>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55650508
chr11:55650581	G G	A A	1	a0001c0001t0001g0011 a0001c0001t0001g0011	1	HG02027.hp2 HG02027.hp2	intron_variant	MODIFIER	c.-36-287G>A c.-36-287G>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55650581
chr11:55650706	G G	A A	1	a0005c0006t0007g0008 a0005c0006t0007g0008	3	HG00099.hp2 HG01433.hp2 NA20129.hp2 HG00099.hp2 HG01433.hp2 NA20129.hp2	intron_variant	MODIFIER	c.-36-162G>A c.-36-162G>A	OR4S2	ENSG00000174982.4	transcript	ENST00000641692.1	protein_coding	1/1		chr11	55650706

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 10)

CCoding Level Haplotype Info (Total: 13)

TTranscript Level Haplotype Info (Total: 14)

GGenebody Level Haplotype Info (Total: 12)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 13)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 21)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 28)

Haplotype Details by Sample (Haploid Level) (Total: 228)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 9)

CCoding Level Variants (Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 16)

GGenebody Level Haplotype Variants (Intron) (Total: 20)

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Annotation (Repeats)

Annotation (SNP Array)