Joint Open Genome and Omics Platform (JoGo)

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geneid	102723859
ensemblid	ENSG00000278599.6
hgncid	27071
symbol	TBC1D3E
name	TBC1 domain family member 3E
refseq_nuc	NM_001291466.2
refseq_prot	NP_001278395.1
ensembl_nuc	ENST00000621587.2
ensembl_prot	ENSP00000483965.1
mane_status	MANE Select
chr	chr17
start	38127951
end	38138868
strand	+
ver	v1.2
region	chr17:38127951-38138868
region5000	chr17:38122951-38143868
regionname0	TBC1D3E_chr17_38127951_38138868
regionname5000	TBC1D3E_chr17_38122951_38143868

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	549	8	5	1	2	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002	0/0	549	8	7	0	1	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0003	0/0	549	6	0	1	5	3	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0004	0/0	549	5	5	0	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0005	0/0	549	3	3	0	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0006	0/0	549	2	2	0	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	regionname	genename	cseq	chr	start	end
c0001	0/0	1650	6	0	1	5	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0002	0/0	1650	3	3	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0003	0/0	1650	3	2	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0004	0/0	1650	3	1	1	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0005	0/0	1650	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0006	0/0	1650	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0007	0/0	1650	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0008	0/0	1650	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0009	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0010	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0011	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0012	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0013	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0014	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0015	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0016	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
c0017	0/0	1650	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	regionname	genename	tseq	chr	start	end
t0001	0/0	432	14	9	1	4	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
t0002	0/0	432	13	8	1	4	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
t0003	0/0	432	4	4	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
t0004	0/0	432	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	regionname	genename	chr	start	end
g0001	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0002	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0003	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0004	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0005	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0006	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0007	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0008	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0009	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0010	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0011	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0012	0/0	1	0	1	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0013	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0014	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0015	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0016	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0017	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0018	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0019	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0020	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0021	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0022	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0023	0/0	1	0	1	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0024	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0025	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0026	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0027	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0028	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0029	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0030	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0031	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
g0032	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	regionname	genename	cseq	chr	start	end
a0001c0004	0/0	1650	3	1	1	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0001c0005	0/0	1650	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0001c0007	0/0	1650	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0001c0017	0/0	1650	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002c0002	0/0	1650	3	3	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002c0003	0/0	1650	3	2	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002c0009	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002c0010	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0003c0001	0/0	1650	6	0	1	5	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0004c0006	0/0	1650	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0004c0008	0/0	1650	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0004c0015	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0005c0013	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0005c0014	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0005c0016	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0006c0011	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0006c0012	0/0	1650	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	regionname	genename	tseq	chr	start	end
a0001c0004t0001	0/0	2081	2	1	1	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0001c0004t0002	0/0	2081	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0001c0005t0002	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0001c0005t0004	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0001c0007t0002	0/0	2081	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0001c0017t0001	0/0	2081	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002c0002t0003	0/0	2081	3	3	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002c0003t0001	0/0	2081	3	2	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002c0009t0001	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0002c0010t0001	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0003c0001t0001	0/0	2081	2	0	0	2	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0003c0001t0002	0/0	2081	4	0	1	3	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0004c0006t0002	0/0	2081	2	2	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0004c0008t0001	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0004c0008t0002	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0004c0015t0002	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0005c0013t0001	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0005c0014t0002	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0005c0016t0001	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0006c0011t0003	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868
a0006c0012t0001	0/0	2081	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	copy fasta	chr17	38122951	38143868

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	regionname	genename	chr	start	end
a0001c0004t0001g0019	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0001c0004t0001g0023	0/0	1	0	1	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0001c0004t0002g0021	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0001c0005t0002g0010	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0001c0005t0004g0027	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0001c0007t0002g0009	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0001c0007t0002g0026	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0001c0017t0001g0005	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0002c0002t0003g0001	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0002c0002t0003g0002	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0002c0002t0003g0003	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0002c0003t0001g0004	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0002c0003t0001g0006	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0002c0003t0001g0030	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0002c0009t0001g0024	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0002c0010t0001g0029	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0003c0001t0001g0031	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0003c0001t0001g0032	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0003c0001t0002g0012	0/0	1	0	1	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0003c0001t0002g0013	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0003c0001t0002g0014	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0003c0001t0002g0015	0/0	1	0	0	1	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0004c0006t0002g0016	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0004c0006t0002g0017	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0004c0008t0001g0025	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0004c0008t0002g0011	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0004c0015t0002g0022	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0005c0013t0001g0028	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0005c0014t0002g0008	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0005c0016t0001g0018	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0006c0011t0003g0007	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
a0006c0012t0001g0020	0/0	1	1	0	0	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00738	hp1	a0003	c0001	t0002	g0012	AMR	PUR	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG00738	hp2	a0001	c0004	t0001	g0023	AMR	PUR	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02040	hp1	a0003	c0001	t0001	g0032	EAS	KHV	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02040	hp2	a0001	c0004	t0002	g0021	EAS	KHV	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02074	hp1	a0003	c0001	t0002	g0015	EAS	KHV	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02074	hp2	a0001	c0017	t0001	g0005	EAS	KHV	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02145	hp1	a0002	c0003	t0001	g0006	AFR	ACB	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02145	hp2	a0004	c0008	t0001	g0025	AFR	ACB	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02717	hp1	a0002	c0002	t0003	g0003	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02717	hp2	a0005	c0014	t0002	g0008	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02723	hp1	a0001	c0007	t0002	g0009	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02723	hp2	a0002	c0002	t0003	g0001	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02818	hp1	a0004	c0008	t0002	g0011	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02818	hp2	a0001	c0005	t0002	g0010	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02895	hp1	a0001	c0004	t0001	g0019	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02895	hp2	a0002	c0009	t0001	g0024	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02897	hp1	a0002	c0010	t0001	g0029	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02897	hp2	a0001	c0007	t0002	g0026	AFR	GWD	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG03098	hp1	a0002	c0002	t0003	g0002	AFR	MSL	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG03098	hp2	a0005	c0013	t0001	g0028	AFR	MSL	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG03209	hp1	a0002	c0003	t0001	g0004	AFR	MSL	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG03209	hp2	a0001	c0005	t0004	g0027	AFR	MSL	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG03453	hp1	a0006	c0011	t0003	g0007	AFR	MSL	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG03453	hp2	a0004	c0006	t0002	g0016	AFR	MSL	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
NA18946	hp1	a0003	c0001	t0001	g0031	EAS	JPT	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
NA18946	hp2	a0002	c0003	t0001	g0030	EAS	JPT	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
NA19066	hp1	a0003	c0001	t0002	g0013	EAS	JPT	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
NA19066	hp2	a0003	c0001	t0002	g0014	EAS	JPT	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
NA19240	hp1	a0004	c0006	t0002	g0017	AFR	YRI	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
NA19240	hp2	a0005	c0016	t0001	g0018	AFR	YRI	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02559	hp1	a0006	c0012	t0001	g0020	AFR	ACB	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868
HG02559	hp2	a0004	c0015	t0002	g0022	AFR	ACB	TBC1D3E_chr17_38122951_38143868	TBC1D3E	chr17	38122951	38143868

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr17:38132155	A A	G G	6	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	32	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(29): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1 NA19240.hp2	missense_variant	MODERATE	c.290A>G c.290A>G	p.Gln97Arg p.Gln97Arg	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	6/14	407/2082	290/1650	97/549	chr17	38132155
chr17:38132215	C C	T T	4	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	22	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(19): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp2 HG02559.hp2 HG02717.hp2 HG02723.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG03098.hp2 HG03209.hp2 HG03453.hp2 NA18946.hp1 NA19066.hp1 NA19066.hp2 NA19240.hp1 NA19240.hp2	missense_variant	MODERATE	c.350C>T c.350C>T	p.Thr117Ile p.Thr117Ile	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	6/14	467/2082	350/1650	117/549	chr17	38132215
chr17:38132604	A A	G G	6	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	32	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(29): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1 NA19240.hp2	missense_variant	MODERATE	c.410A>G c.410A>G	p.Lys137Arg p.Lys137Arg	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/14	527/2082	410/1650	137/549	chr17	38132604
chr17:38136982	A A	C C	2	a0004 a0006 a0004 a0006	7	HG02145.hp2 HG02559.hp1 HG02559.hp2 others(4): Show HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02818.hp1 HG03453.hp1 HG03453.hp2 NA19240.hp1	missense_variant	MODERATE	c.1060A>C c.1060A>C	p.Lys354Gln p.Lys354Gln	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	13/14	1177/2082	1060/1650	354/549	chr17	38136982
chr17:38138120	C C	T T	2	a0003 a0005 a0003 a0005	9	HG00738.hp1 HG02040.hp1 HG02074.hp1 others(6): Show HG00738.hp1 HG02040.hp1 HG02074.hp1 HG02717.hp2 HG03098.hp2 NA18946.hp1 NA19066.hp1 NA19066.hp2 NA19240.hp2	missense_variant	MODERATE	c.1217C>T c.1217C>T	p.Pro406Leu p.Pro406Leu	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	14/14	1334/2082	1217/1650	406/549	chr17	38138120
chr17:38138342	T T	C C	1	a0003 a0003	6	HG00738.hp1 HG02040.hp1 HG02074.hp1 others(3): Show HG00738.hp1 HG02040.hp1 HG02074.hp1 NA18946.hp1 NA19066.hp1 NA19066.hp2	missense_variant	MODERATE	c.1439T>C c.1439T>C	p.Val480Ala p.Val480Ala	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	14/14	1556/2082	1439/1650	480/549	chr17	38138342
chr17:38138354	C C	A A	1	a0003 a0003	6	HG00738.hp1 HG02040.hp1 HG02074.hp1 others(3): Show HG00738.hp1 HG02040.hp1 HG02074.hp1 NA18946.hp1 NA19066.hp1 NA19066.hp2	missense_variant	MODERATE	c.1451C>A c.1451C>A	p.Ser484Tyr p.Ser484Tyr	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	14/14	1568/2082	1451/1650	484/549	chr17	38138354

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr17:38132651	T T	C C	2	a0001c0005 a0002c0009 a0001c0005 a0002c0009	3	HG02818.hp2 HG02895.hp2 HG03209.hp2 HG02818.hp2 HG02895.hp2 HG03209.hp2	synonymous_variant	LOW	c.457T>C c.457T>C	p.Leu153Leu p.Leu153Leu	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/14	574/2082	457/1650	153/549	chr17	38132651
chr17:38133989	C C	T T	7	a0001c0004 a0001c0017 a0002c0003 others(4): Show a0001c0004 a0001c0017 a0002c0003 a0003c0001 a0004c0008 a0005c0016 a0006c0012	17	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(14): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02818.hp1 HG02895.hp1 HG03209.hp1 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp2	synonymous_variant	LOW	c.540C>T c.540C>T	p.Tyr180Tyr p.Tyr180Tyr	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	8/14	657/2082	540/1650	180/549	chr17	38133989
chr17:38134652	C C	T T	2	a0001c0017 a0006c0012 a0001c0017 a0006c0012	2	HG02074.hp2 HG02559.hp1 HG02074.hp2 HG02559.hp1	synonymous_variant	LOW	c.660C>T c.660C>T	p.Ser220Ser p.Ser220Ser	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/14	777/2082	660/1650	220/549	chr17	38134652
chr17:38136441	C C	T T	14	a0001c0004 a0001c0005 a0001c0007 others(11): Show a0001c0004 a0001c0005 a0001c0007 a0001c0017 a0002c0003 a0002c0009 a0002c0010 a0003c0001 a0004c0008 a0004c0015 a0005c0014 a0005c0016 a0006c0011 a0006c0012	26	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(23): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp2 HG02723.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp2	synonymous_variant	LOW	c.889C>T c.889C>T	p.Leu297Leu p.Leu297Leu	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	12/14	1006/2082	889/1650	297/549	chr17	38136441

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr17:38127953	C C	G G	9	a0001c0004t0002 a0001c0005t0002 a0001c0005t0004 others(6): Show a0001c0004t0002 a0001c0005t0002 a0001c0005t0004 a0001c0007t0002 a0003c0001t0002 a0004c0006t0002 a0004c0008t0002 a0004c0015t0002 a0005c0014t0002	14	HG00738.hp1 HG02040.hp2 HG02074.hp1 others(11): Show HG00738.hp1 HG02040.hp2 HG02074.hp1 HG02559.hp2 HG02717.hp2 HG02723.hp1 HG02818.hp1 HG02818.hp2 HG02897.hp2 HG03209.hp2 HG03453.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1	5_prime_UTR_variant	MODIFIER	c.-115C>G c.-115C>G		TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/14				1543		chr17	38127953
chr17:38138734	A A	G G	3	a0001c0005t0004 a0002c0002t0003 a0006c0011t0003 a0001c0005t0004 a0002c0002t0003 a0006c0011t0003	5	HG02717.hp1 HG02723.hp2 HG03098.hp1 others(2): Show HG02717.hp1 HG02723.hp2 HG03098.hp1 HG03209.hp2 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.181A>G c.181A>G		TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	14/14				181		chr17	38138734

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr17:38128125	G G	A A	4	a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 others(1): Show a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0004	4	HG02717.hp1 HG02723.hp2 HG03098.hp1 others(1): Show HG02717.hp1 HG02723.hp2 HG03098.hp1 HG03209.hp1	intron_variant	MODIFIER	c.-2+59G>A c.-2+59G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128125
chr17:38128185	C C	T T	3	a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032 a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032	3	HG02040.hp1 NA18946.hp1 NA18946.hp2 HG02040.hp1 NA18946.hp1 NA18946.hp2	intron_variant	MODIFIER	c.-2+119C>T c.-2+119C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128185
chr17:38128225	G G	A A	1	a0001c0017t0001g0005 a0001c0017t0001g0005	1	HG02074.hp2 HG02074.hp2	intron_variant	MODIFIER	c.-2+159G>A c.-2+159G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128225
chr17:38128275	C C	T T	1	a0002c0010t0001g0029 a0002c0010t0001g0029	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.-2+209C>T c.-2+209C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128275
chr17:38128334	T T	C C	31	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 others(28): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0009t0001g0024 a0002c0010t0001g0029 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0006t0002g0016 a0004c0006t0002g0017 a0004c0008t0001g0025 a0004c0008t0002g0011 a0004c0015t0002g0022 a0005c0014t0002g0008 a0005c0016t0001g0018 a0006c0011t0003g0007 a0006c0012t0001g0020	31	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(28): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.-2+268T>C c.-2+268T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128334
chr17:38128462	CAGAGCCA others(7): Show CAGAGCCACTGGTAT	C C	4	a0001c0005t0002g0010 a0001c0007t0002g0009 a0005c0014t0002g0008 others(1): Show a0001c0005t0002g0010 a0001c0007t0002g0009 a0005c0014t0002g0008 a0006c0011t0003g0007	4	HG02717.hp2 HG02723.hp1 HG02818.hp2 others(1): Show HG02717.hp2 HG02723.hp1 HG02818.hp2 HG03453.hp1	intron_variant	MODIFIER	c.-2+410_-2+423delTA others(12): Show c.-2+410_-2+423delTAGAGCCACTGGTA	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13	INFO_REALIGN_3_PRIME	chr17	38128462
chr17:38128473	G G	A A	1	a0002c0003t0001g0006 a0002c0003t0001g0006	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.-2+407G>A c.-2+407G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128473
chr17:38128584	GGGGGAGC others(11): Show GGGGGAGCCTGCTGCCCTT	G G	4	a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 others(1): Show a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0004c0008t0002g0011	4	HG02717.hp1 HG02723.hp2 HG02818.hp1 others(1): Show HG02717.hp1 HG02723.hp2 HG02818.hp1 HG03098.hp1	intron_variant	MODIFIER	c.-2+522_-2+539delGA others(16): Show c.-2+522_-2+539delGAGCCTGCTGCCCTTGGG	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13	INFO_REALIGN_3_PRIME	chr17	38128584
chr17:38128609	C C	G G	1	a0005c0013t0001g0028 a0005c0013t0001g0028	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.-2+543C>G c.-2+543C>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128609
chr17:38128716	C C	T T	1	a0002c0003t0001g0004 a0002c0003t0001g0004	1	HG03209.hp1 HG03209.hp1	intron_variant	MODIFIER	c.-2+650C>T c.-2+650C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128716
chr17:38128730	G G	A A	8	a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032 others(5): Show a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0006c0011t0003g0007	8	HG00738.hp1 HG02040.hp1 HG02074.hp1 others(5): Show HG00738.hp1 HG02040.hp1 HG02074.hp1 HG03453.hp1 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2	intron_variant	MODIFIER	c.-2+664G>A c.-2+664G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128730
chr17:38128789	C C	T T	3	a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032 a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032	3	HG02040.hp1 NA18946.hp1 NA18946.hp2 HG02040.hp1 NA18946.hp1 NA18946.hp2	intron_variant	MODIFIER	c.-1-706C>T c.-1-706C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128789
chr17:38128922	T T	C C	14	a0001c0004t0001g0019 a0001c0005t0002g0010 a0001c0007t0002g0009 others(11): Show a0001c0004t0001g0019 a0001c0005t0002g0010 a0001c0007t0002g0009 a0002c0003t0001g0030 a0002c0010t0001g0029 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0004c0006t0002g0016 a0004c0006t0002g0017 a0005c0013t0001g0028 a0005c0014t0002g0008 a0005c0016t0001g0018 a0006c0011t0003g0007	14	HG00738.hp1 HG02040.hp1 HG02717.hp2 others(11): Show HG00738.hp1 HG02040.hp1 HG02717.hp2 HG02723.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp1 HG03098.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.-1-573T>C c.-1-573T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128922
chr17:38128930	C C	T T	1	a0006c0011t0003g0007 a0006c0011t0003g0007	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.-1-565C>T c.-1-565C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38128930
chr17:38129002	C C	T T	2	a0001c0005t0004g0027 a0001c0007t0002g0026 a0001c0005t0004g0027 a0001c0007t0002g0026	2	HG02897.hp2 HG03209.hp2 HG02897.hp2 HG03209.hp2	intron_variant	MODIFIER	c.-1-493C>T c.-1-493C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38129002
chr17:38129254	A A	T T	1	a0003c0001t0002g0015 a0003c0001t0002g0015	1	HG02074.hp1 HG02074.hp1	intron_variant	MODIFIER	c.-1-241A>T c.-1-241A>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38129254
chr17:38129296	T T	C C	1	a0002c0003t0001g0004 a0002c0003t0001g0004	1	HG03209.hp1 HG03209.hp1	intron_variant	MODIFIER	c.-1-199T>C c.-1-199T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38129296
chr17:38129464	G G	A A	18	a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 others(15): Show a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0010t0001g0029 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0015 a0004c0006t0002g0016 a0004c0015t0002g0022 a0005c0014t0002g0008 a0006c0011t0003g0007 a0006c0012t0001g0020	18	HG00738.hp1 HG00738.hp2 HG02040.hp2 others(15): Show HG00738.hp1 HG00738.hp2 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02559.hp1 HG02559.hp2 HG02717.hp2 HG02723.hp1 HG02818.hp2 HG02897.hp1 HG02897.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA19066.hp1	intron_variant	MODIFIER	c.-1-31G>A c.-1-31G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	1/13		chr17	38129464
chr17:38129842	C C	T T	1	a0001c0005t0002g0010 a0001c0005t0002g0010	1	HG02818.hp2 HG02818.hp2	intron_variant	MODIFIER	c.158+27C>T c.158+27C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38129842
chr17:38129884	A A	T T	1	a0004c0008t0001g0025 a0004c0008t0001g0025	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.158+69A>T c.158+69A>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38129884
chr17:38130016	G G	A A	1	a0004c0008t0001g0025 a0004c0008t0001g0025	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.158+201G>A c.158+201G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130016
chr17:38130203	C C	G G	2	a0001c0007t0002g0009 a0005c0014t0002g0008 a0001c0007t0002g0009 a0005c0014t0002g0008	2	HG02717.hp2 HG02723.hp1 HG02717.hp2 HG02723.hp1	intron_variant	MODIFIER	c.158+388C>G c.158+388C>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130203
chr17:38130217	A A	G G	1	a0002c0003t0001g0006 a0002c0003t0001g0006	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.158+402A>G c.158+402A>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130217
chr17:38130547	A A	C C	1	a0002c0009t0001g0024 a0002c0009t0001g0024	1	HG02895.hp2 HG02895.hp2	intron_variant	MODIFIER	c.159-552A>C c.159-552A>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130547
chr17:38130564	T T	C C	5	a0001c0004t0002g0021 a0002c0002t0003g0001 a0002c0002t0003g0002 others(2): Show a0001c0004t0002g0021 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0006c0012t0001g0020	5	HG02040.hp2 HG02559.hp1 HG02717.hp1 others(2): Show HG02040.hp2 HG02559.hp1 HG02717.hp1 HG02723.hp2 HG03098.hp1	intron_variant	MODIFIER	c.159-535T>C c.159-535T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130564
chr17:38130625	G G	A A	2	a0001c0017t0001g0005 a0004c0008t0001g0025 a0001c0017t0001g0005 a0004c0008t0001g0025	2	HG02074.hp2 HG02145.hp2 HG02074.hp2 HG02145.hp2	intron_variant	MODIFIER	c.159-474G>A c.159-474G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130625
chr17:38130626	T T	C C	1	a0002c0009t0001g0024 a0002c0009t0001g0024	1	HG02895.hp2 HG02895.hp2	intron_variant	MODIFIER	c.159-473T>C c.159-473T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130626
chr17:38130825	C C	G G	2	a0001c0017t0001g0005 a0004c0008t0001g0025 a0001c0017t0001g0005 a0004c0008t0001g0025	2	HG02074.hp2 HG02145.hp2 HG02074.hp2 HG02145.hp2	intron_variant	MODIFIER	c.159-274C>G c.159-274C>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130825
chr17:38130924	C C	G G	3	a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032 a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032	3	HG02040.hp1 NA18946.hp1 NA18946.hp2 HG02040.hp1 NA18946.hp1 NA18946.hp2	intron_variant	MODIFIER	c.159-175C>G c.159-175C>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130924
chr17:38130983	G G	A A	1	a0006c0012t0001g0020 a0006c0012t0001g0020	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.159-116G>A c.159-116G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38130983
chr17:38131033	G G	A A	3	a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003	3	HG02717.hp1 HG02723.hp2 HG03098.hp1 HG02717.hp1 HG02723.hp2 HG03098.hp1	intron_variant	MODIFIER	c.159-66G>A c.159-66G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	3/13		chr17	38131033
chr17:38131232	C C	T T	1	a0002c0002t0003g0003 a0002c0002t0003g0003	1	HG02717.hp1 HG02717.hp1	intron_variant	MODIFIER	c.198+94C>T c.198+94C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	4/13		chr17	38131232
chr17:38131319	A A	G G	1	a0002c0010t0001g0029 a0002c0010t0001g0029	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.198+181A>G c.198+181A>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	4/13		chr17	38131319
chr17:38131365	C C	T T	3	a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003	3	HG02717.hp1 HG02723.hp2 HG03098.hp1 HG02717.hp1 HG02723.hp2 HG03098.hp1	intron_variant	MODIFIER	c.198+227C>T c.198+227C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	4/13		chr17	38131365
chr17:38131833	G G	A A	1	a0006c0012t0001g0020 a0006c0012t0001g0020	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.279+132G>A c.279+132G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	5/13		chr17	38131833
chr17:38131932	T T	G G	2	a0001c0004t0002g0021 a0002c0003t0001g0030 a0001c0004t0002g0021 a0002c0003t0001g0030	2	HG02040.hp2 NA18946.hp2 HG02040.hp2 NA18946.hp2	intron_variant	MODIFIER	c.280-213T>G c.280-213T>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	5/13		chr17	38131932
chr17:38132492	G G	A A	1	a0002c0010t0001g0029 a0002c0010t0001g0029	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.388-90G>A c.388-90G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	6/13		chr17	38132492
chr17:38132773	G G	A A	1	a0002c0003t0001g0006 a0002c0003t0001g0006	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.497+82G>A c.497+82G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38132773
chr17:38132994	T T	C C	32	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 others(29): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0009t0001g0024 a0002c0010t0001g0029 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0006t0002g0016 a0004c0006t0002g0017 a0004c0008t0001g0025 a0004c0008t0002g0011 a0004c0015t0002g0022 a0005c0013t0001g0028 a0005c0014t0002g0008 a0005c0016t0001g0018 a0006c0011t0003g0007 a0006c0012t0001g0020	32	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(29): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.497+303T>C c.497+303T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38132994
chr17:38133030	G G	C C	20	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 others(17): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0007t0002g0009 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0003t0001g0006 a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0006t0002g0016 a0004c0006t0002g0017 a0004c0015t0002g0022 a0005c0013t0001g0028 a0005c0014t0002g0008 a0005c0016t0001g0018	20	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(17): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02559.hp2 HG02717.hp2 HG02723.hp1 HG02895.hp1 HG02897.hp2 HG03098.hp2 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.497+339G>C c.497+339G>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38133030
chr17:38133452	A A	C C	13	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 others(10): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0017t0001g0005 a0002c0003t0001g0030 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0008t0001g0025 a0005c0016t0001g0018	13	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(10): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp2 HG02895.hp1 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp2	intron_variant	MODIFIER	c.498-495A>C c.498-495A>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38133452
chr17:38133522	C C	T T	1	a0002c0010t0001g0029 a0002c0010t0001g0029	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.498-425C>T c.498-425C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38133522
chr17:38133637	T T	C C	28	a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 others(25): Show a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0009t0001g0024 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0006t0002g0016 a0004c0006t0002g0017 a0004c0008t0001g0025 a0004c0008t0002g0011 a0004c0015t0002g0022 a0005c0013t0001g0028 a0005c0014t0002g0008 a0006c0011t0003g0007 a0006c0012t0001g0020	28	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(25): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp2 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1	intron_variant	MODIFIER	c.498-310T>C c.498-310T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38133637
chr17:38133696	GA GA	G G	12	a0001c0005t0002g0010 a0001c0007t0002g0009 a0002c0002t0003g0001 others(9): Show a0001c0005t0002g0010 a0001c0007t0002g0009 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0004c0008t0001g0025 a0004c0015t0002g0022 a0005c0014t0002g0008 a0005c0016t0001g0018	12	HG00738.hp1 HG02040.hp1 HG02145.hp2 others(9): Show HG00738.hp1 HG02040.hp1 HG02145.hp2 HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp2 HG03098.hp1 NA18946.hp1 NA19240.hp2	intron_variant	MODIFIER	c.498-234delA c.498-234delA	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13	INFO_REALIGN_3_PRIME	chr17	38133696
chr17:38133696	GAA GAA	G G	6	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 others(3): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0017t0001g0005 a0002c0010t0001g0029 a0006c0012t0001g0020	6	HG00738.hp2 HG02040.hp2 HG02074.hp2 others(3): Show HG00738.hp2 HG02040.hp2 HG02074.hp2 HG02559.hp1 HG02895.hp1 HG02897.hp1	intron_variant	MODIFIER	c.498-235_498-234del others(2): Show c.498-235_498-234delAA	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13	INFO_REALIGN_3_PRIME	chr17	38133696
chr17:38133696	GAAAAAAA GAAAAAAA	G G	5	a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0009t0001g0024 others(2): Show a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0009t0001g0024 a0004c0008t0002g0011 a0006c0011t0003g0007	5	HG02145.hp1 HG02818.hp1 HG02895.hp2 others(2): Show HG02145.hp1 HG02818.hp1 HG02895.hp2 HG03453.hp1 NA18946.hp2	intron_variant	MODIFIER	c.498-240_498-234del others(7): Show c.498-240_498-234delAAAAAAA	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13	INFO_REALIGN_3_PRIME	chr17	38133696
chr17:38133782	T T	A A	1	a0006c0012t0001g0020 a0006c0012t0001g0020	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.498-165T>A c.498-165T>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38133782
chr17:38133805	G G	A A	22	a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 others(19): Show a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0010t0001g0029 a0004c0006t0002g0016 a0004c0006t0002g0017 a0004c0008t0001g0025 a0004c0008t0002g0011 a0004c0015t0002g0022 a0005c0013t0001g0028 a0005c0014t0002g0008 a0006c0011t0003g0007 a0006c0012t0001g0020	22	HG00738.hp2 HG02040.hp2 HG02074.hp2 others(19): Show HG00738.hp2 HG02040.hp2 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp2 NA19240.hp1	intron_variant	MODIFIER	c.498-142G>A c.498-142G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38133805
chr17:38133846	A A	C C	1	a0002c0010t0001g0029 a0002c0010t0001g0029	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.498-101A>C c.498-101A>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	7/13		chr17	38133846
chr17:38134008	G G	A A	3	a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003	3	HG02717.hp1 HG02723.hp2 HG03098.hp1 HG02717.hp1 HG02723.hp2 HG03098.hp1	intron_variant	MODIFIER	c.546+13G>A c.546+13G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	8/13		chr17	38134008
chr17:38134083	A A	C C	12	a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 others(9): Show a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 a0001c0007t0002g0026 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0030 a0002c0009t0001g0024 a0004c0015t0002g0022 a0005c0014t0002g0008 a0006c0011t0003g0007	12	HG02559.hp2 HG02717.hp1 HG02717.hp2 others(9): Show HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp2 HG02895.hp2 HG02897.hp2 HG03098.hp1 HG03209.hp2 HG03453.hp1 NA18946.hp2	intron_variant	MODIFIER	c.546+88A>C c.546+88A>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	8/13		chr17	38134083
chr17:38134160	G G	A A	1	a0002c0010t0001g0029 a0002c0010t0001g0029	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.546+165G>A c.546+165G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	8/13		chr17	38134160
chr17:38134190	A A	G G	4	a0001c0005t0004g0027 a0004c0006t0002g0016 a0004c0006t0002g0017 others(1): Show a0001c0005t0004g0027 a0004c0006t0002g0016 a0004c0006t0002g0017 a0005c0013t0001g0028	4	HG03098.hp2 HG03209.hp2 HG03453.hp2 others(1): Show HG03098.hp2 HG03209.hp2 HG03453.hp2 NA19240.hp1	intron_variant	MODIFIER	c.546+195A>G c.546+195A>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	8/13		chr17	38134190
chr17:38134503	G G	A A	1	a0006c0012t0001g0020 a0006c0012t0001g0020	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.547-36G>A c.547-36G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	8/13		chr17	38134503
chr17:38134662	T T	A A	32	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 others(29): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0009t0001g0024 a0002c0010t0001g0029 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0006t0002g0016 a0004c0006t0002g0017 a0004c0008t0001g0025 a0004c0008t0002g0011 a0004c0015t0002g0022 a0005c0013t0001g0028 a0005c0014t0002g0008 a0005c0016t0001g0018 a0006c0011t0003g0007 a0006c0012t0001g0020	32	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(29): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1 NA19240.hp2	splice_region_variant&intron_variant	LOW	c.667+3T>A c.667+3T>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134662
chr17:38134721	A A	G G	1	a0002c0010t0001g0029 a0002c0010t0001g0029	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.667+62A>G c.667+62A>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134721
chr17:38134753	C C	T T	1	a0004c0008t0002g0011 a0004c0008t0002g0011	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.667+94C>T c.667+94C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134753
chr17:38134761	G G	A A	1	a0004c0008t0002g0011 a0004c0008t0002g0011	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.667+102G>A c.667+102G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134761
chr17:38134784	G G	A A	10	a0001c0004t0001g0019 a0002c0002t0003g0001 a0002c0002t0003g0002 others(7): Show a0001c0004t0001g0019 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0003c0001t0001g0031 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0005c0016t0001g0018	10	HG00738.hp1 HG02074.hp1 HG02717.hp1 others(7): Show HG00738.hp1 HG02074.hp1 HG02717.hp1 HG02723.hp2 HG02895.hp1 HG03098.hp1 NA18946.hp1 NA19066.hp1 NA19066.hp2 NA19240.hp2	intron_variant	MODIFIER	c.667+125G>A c.667+125G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134784
chr17:38134843	C C	T T	1	a0003c0001t0002g0015 a0003c0001t0002g0015	1	HG02074.hp1 HG02074.hp1	intron_variant	MODIFIER	c.667+184C>T c.667+184C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134843
chr17:38134848	C C	G G	13	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0005t0002g0010 others(10): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0005t0002g0010 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0006 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0004c0008t0002g0011 a0005c0016t0001g0018 a0006c0011t0003g0007	13	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(10): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02145.hp1 HG02717.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG03098.hp1 HG03453.hp1 NA18946.hp1 NA19240.hp2	intron_variant	MODIFIER	c.667+189C>G c.667+189C>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134848
chr17:38134871	T T	C C	1	a0002c0010t0001g0029 a0002c0010t0001g0029	1	HG02897.hp1 HG02897.hp1	intron_variant	MODIFIER	c.667+212T>C c.667+212T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134871
chr17:38134985	T T	C C	1	a0004c0008t0002g0011 a0004c0008t0002g0011	1	HG02818.hp1 HG02818.hp1	intron_variant	MODIFIER	c.667+326T>C c.667+326T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38134985
chr17:38135010	T T	C C	7	a0001c0004t0001g0019 a0002c0003t0001g0004 a0002c0003t0001g0006 others(4): Show a0001c0004t0001g0019 a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0010t0001g0029 a0005c0016t0001g0018 a0006c0011t0003g0007	7	HG02145.hp1 HG02895.hp1 HG02897.hp1 others(4): Show HG02145.hp1 HG02895.hp1 HG02897.hp1 HG03209.hp1 HG03453.hp1 NA18946.hp2 NA19240.hp2	intron_variant	MODIFIER	c.667+351T>C c.667+351T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38135010
chr17:38135016	G G	A A	1	a0006c0011t0003g0007 a0006c0011t0003g0007	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.667+357G>A c.667+357G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38135016
chr17:38135057	C C	T T	19	a0001c0004t0001g0019 a0001c0007t0002g0026 a0001c0017t0001g0005 others(16): Show a0001c0004t0001g0019 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0009t0001g0024 a0002c0010t0001g0029 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0008t0002g0011 a0005c0016t0001g0018 a0006c0011t0003g0007	19	HG00738.hp1 HG02040.hp1 HG02074.hp1 others(16): Show HG00738.hp1 HG02040.hp1 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02717.hp1 HG02723.hp2 HG02818.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03209.hp1 HG03453.hp1 NA18946.hp1 NA19066.hp1 NA19066.hp2 NA19240.hp2	intron_variant	MODIFIER	c.668-316C>T c.668-316C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38135057
chr17:38135116	A A	G G	1	a0003c0001t0002g0013 a0003c0001t0002g0013	1	NA19066.hp1 NA19066.hp1	intron_variant	MODIFIER	c.668-257A>G c.668-257A>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38135116
chr17:38135140	G G	T T	1	a0004c0008t0001g0025 a0004c0008t0001g0025	1	HG02145.hp2 HG02145.hp2	intron_variant	MODIFIER	c.668-233G>T c.668-233G>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38135140
chr17:38135212	GC GC	G G	2	a0001c0017t0001g0005 a0006c0012t0001g0020 a0001c0017t0001g0005 a0006c0012t0001g0020	2	HG02074.hp2 HG02559.hp1 HG02074.hp2 HG02559.hp1	intron_variant	MODIFIER	c.668-157delC c.668-157delC	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13	INFO_REALIGN_3_PRIME	chr17	38135212
chr17:38135256	C C	T T	24	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 others(21): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0017t0001g0005 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0009t0001g0024 a0002c0010t0001g0029 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0008t0001g0025 a0004c0008t0002g0011 a0004c0015t0002g0022 a0005c0016t0001g0018 a0006c0011t0003g0007 a0006c0012t0001g0020	24	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(21): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02559.hp2 HG02717.hp1 HG02723.hp2 HG02818.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG03098.hp1 HG03209.hp1 HG03453.hp1 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp2	intron_variant	MODIFIER	c.668-117C>T c.668-117C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	9/13		chr17	38135256
chr17:38135531	G G	C C	1	a0002c0009t0001g0024 a0002c0009t0001g0024	1	HG02895.hp2 HG02895.hp2	intron_variant	MODIFIER	c.762+64G>C c.762+64G>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	10/13		chr17	38135531
chr17:38135581	G G	T T	7	a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 others(4): Show a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0026 a0004c0008t0001g0025 a0004c0008t0002g0011	7	HG00738.hp2 HG02040.hp2 HG02145.hp2 others(4): Show HG00738.hp2 HG02040.hp2 HG02145.hp2 HG02818.hp1 HG02818.hp2 HG02897.hp2 HG03209.hp2	intron_variant	MODIFIER	c.762+114G>T c.762+114G>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	10/13		chr17	38135581
chr17:38135584	C C	T T	31	a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 others(28): Show a0001c0004t0001g0019 a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0009 a0001c0007t0002g0026 a0001c0017t0001g0005 a0002c0002t0003g0001 a0002c0002t0003g0002 a0002c0002t0003g0003 a0002c0003t0001g0004 a0002c0003t0001g0006 a0002c0003t0001g0030 a0002c0009t0001g0024 a0002c0010t0001g0029 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0004c0006t0002g0016 a0004c0006t0002g0017 a0004c0008t0001g0025 a0004c0008t0002g0011 a0005c0013t0001g0028 a0005c0014t0002g0008 a0005c0016t0001g0018 a0006c0011t0003g0007 a0006c0012t0001g0020	31	HG00738.hp1 HG00738.hp2 HG02040.hp1 others(28): Show HG00738.hp1 HG00738.hp2 HG02040.hp1 HG02040.hp2 HG02074.hp1 HG02074.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 NA18946.hp1 NA18946.hp2 NA19066.hp1 NA19066.hp2 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.762+117C>T c.762+117C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	10/13		chr17	38135584
chr17:38135677	G G	A A	6	a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 others(3): Show a0001c0004t0001g0023 a0001c0004t0002g0021 a0001c0005t0002g0010 a0001c0007t0002g0026 a0002c0003t0001g0030 a0004c0008t0001g0025	6	HG00738.hp2 HG02040.hp2 HG02145.hp2 others(3): Show HG00738.hp2 HG02040.hp2 HG02145.hp2 HG02818.hp2 HG02897.hp2 NA18946.hp2	intron_variant	MODIFIER	c.763-175G>A c.763-175G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	10/13		chr17	38135677
chr17:38135807	T T	G G	1	a0002c0002t0003g0001 a0002c0002t0003g0001	1	HG02723.hp2 HG02723.hp2	intron_variant	MODIFIER	c.763-45T>G c.763-45T>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	10/13		chr17	38135807
chr17:38136044	C C	T T	1	a0001c0007t0002g0009 a0001c0007t0002g0009	1	HG02723.hp1 HG02723.hp1	intron_variant	MODIFIER	c.828+127C>T c.828+127C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	11/13		chr17	38136044
chr17:38136152	A A	G G	10	a0001c0004t0001g0019 a0001c0007t0002g0009 a0003c0001t0001g0031 others(7): Show a0001c0004t0001g0019 a0001c0007t0002g0009 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0005c0014t0002g0008 a0005c0016t0001g0018	10	HG00738.hp1 HG02040.hp1 HG02074.hp1 others(7): Show HG00738.hp1 HG02040.hp1 HG02074.hp1 HG02717.hp2 HG02723.hp1 HG02895.hp1 NA18946.hp1 NA19066.hp1 NA19066.hp2 NA19240.hp2	intron_variant	MODIFIER	c.829-229A>G c.829-229A>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	11/13		chr17	38136152
chr17:38136167	G G	A A	1	a0002c0003t0001g0006 a0002c0003t0001g0006	1	HG02145.hp1 HG02145.hp1	intron_variant	MODIFIER	c.829-214G>A c.829-214G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	11/13		chr17	38136167
chr17:38136204	A A	G G	5	a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0026 others(2): Show a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0026 a0002c0003t0001g0004 a0004c0015t0002g0022	5	HG02559.hp2 HG02818.hp2 HG02897.hp2 others(2): Show HG02559.hp2 HG02818.hp2 HG02897.hp2 HG03209.hp1 HG03209.hp2	intron_variant	MODIFIER	c.829-177A>G c.829-177A>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	11/13		chr17	38136204
chr17:38136225	C C	T T	1	a0005c0013t0001g0028 a0005c0013t0001g0028	1	HG03098.hp2 HG03098.hp2	intron_variant	MODIFIER	c.829-156C>T c.829-156C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	11/13		chr17	38136225
chr17:38136692	G G	A A	2	a0001c0017t0001g0005 a0006c0012t0001g0020 a0001c0017t0001g0005 a0006c0012t0001g0020	2	HG02074.hp2 HG02559.hp1 HG02074.hp2 HG02559.hp1	intron_variant	MODIFIER	c.929-159G>A c.929-159G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	12/13		chr17	38136692
chr17:38136696	C C	T T	1	a0006c0012t0001g0020 a0006c0012t0001g0020	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.929-155C>T c.929-155C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	12/13		chr17	38136696
chr17:38136720	G G	A A	2	a0001c0017t0001g0005 a0006c0012t0001g0020 a0001c0017t0001g0005 a0006c0012t0001g0020	2	HG02074.hp2 HG02559.hp1 HG02074.hp2 HG02559.hp1	intron_variant	MODIFIER	c.929-131G>A c.929-131G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	12/13		chr17	38136720
chr17:38136722	G G	A A	4	a0001c0017t0001g0005 a0005c0013t0001g0028 a0006c0011t0003g0007 others(1): Show a0001c0017t0001g0005 a0005c0013t0001g0028 a0006c0011t0003g0007 a0006c0012t0001g0020	4	HG02074.hp2 HG02559.hp1 HG03098.hp2 others(1): Show HG02074.hp2 HG02559.hp1 HG03098.hp2 HG03453.hp1	intron_variant	MODIFIER	c.929-129G>A c.929-129G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	12/13		chr17	38136722
chr17:38136761	C C	G G	2	a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0001g0031 a0003c0001t0001g0032	2	HG02040.hp1 NA18946.hp1 HG02040.hp1 NA18946.hp1	intron_variant	MODIFIER	c.929-90C>G c.929-90C>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	12/13		chr17	38136761
chr17:38136762	C C	T T	10	a0001c0004t0001g0019 a0001c0007t0002g0009 a0003c0001t0001g0031 others(7): Show a0001c0004t0001g0019 a0001c0007t0002g0009 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0005c0014t0002g0008 a0005c0016t0001g0018	10	HG00738.hp1 HG02040.hp1 HG02074.hp1 others(7): Show HG00738.hp1 HG02040.hp1 HG02074.hp1 HG02717.hp2 HG02723.hp1 HG02895.hp1 NA18946.hp1 NA19066.hp1 NA19066.hp2 NA19240.hp2	intron_variant	MODIFIER	c.929-89C>T c.929-89C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	12/13		chr17	38136762
chr17:38137058	A A	G G	1	a0004c0015t0002g0022 a0004c0015t0002g0022	1	HG02559.hp2 HG02559.hp2	intron_variant	MODIFIER	c.1081+55A>G c.1081+55A>G	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	13/13		chr17	38137058
chr17:38137478	AGGGCACA others(11): Show AGGGCACAGGCGGGACCCC	A A	3	a0002c0009t0001g0024 a0002c0010t0001g0029 a0004c0008t0001g0025 a0002c0009t0001g0024 a0002c0010t0001g0029 a0004c0008t0001g0025	3	HG02145.hp2 HG02895.hp2 HG02897.hp1 HG02145.hp2 HG02895.hp2 HG02897.hp1	intron_variant	MODIFIER	c.1081+480_1082-485d others(20): Show c.1081+480_1082-485delACAGGCGGGACCCCGGGC	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	13/13	INFO_REALIGN_3_PRIME	chr17	38137478
chr17:38137532	T T	C C	3	a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0026 a0001c0005t0002g0010 a0001c0005t0004g0027 a0001c0007t0002g0026	3	HG02818.hp2 HG02897.hp2 HG03209.hp2 HG02818.hp2 HG02897.hp2 HG03209.hp2	intron_variant	MODIFIER	c.1082-453T>C c.1082-453T>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	13/13		chr17	38137532
chr17:38137641	G G	A A	3	a0001c0004t0001g0023 a0001c0004t0002g0021 a0002c0003t0001g0030 a0001c0004t0001g0023 a0001c0004t0002g0021 a0002c0003t0001g0030	3	HG00738.hp2 HG02040.hp2 NA18946.hp2 HG00738.hp2 HG02040.hp2 NA18946.hp2	intron_variant	MODIFIER	c.1082-344G>A c.1082-344G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	13/13		chr17	38137641
chr17:38137782	G G	C C	1	a0006c0011t0003g0007 a0006c0011t0003g0007	1	HG03453.hp1 HG03453.hp1	intron_variant	MODIFIER	c.1082-203G>C c.1082-203G>C	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	13/13		chr17	38137782
chr17:38137817	C C	T T	10	a0001c0004t0001g0019 a0001c0007t0002g0009 a0003c0001t0001g0031 others(7): Show a0001c0004t0001g0019 a0001c0007t0002g0009 a0003c0001t0001g0031 a0003c0001t0001g0032 a0003c0001t0002g0012 a0003c0001t0002g0013 a0003c0001t0002g0014 a0003c0001t0002g0015 a0005c0013t0001g0028 a0005c0014t0002g0008	10	HG00738.hp1 HG02040.hp1 HG02074.hp1 others(7): Show HG00738.hp1 HG02040.hp1 HG02074.hp1 HG02717.hp2 HG02723.hp1 HG02895.hp1 HG03098.hp2 NA18946.hp1 NA19066.hp1 NA19066.hp2	intron_variant	MODIFIER	c.1082-168C>T c.1082-168C>T	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	13/13		chr17	38137817
chr17:38137852	G G	A A	1	a0001c0004t0002g0021 a0001c0004t0002g0021	1	HG02040.hp2 HG02040.hp2	intron_variant	MODIFIER	c.1082-133G>A c.1082-133G>A	TBC1D3E	ENSG00000278599.6	transcript	ENST00000621587.2	protein_coding	13/13		chr17	38137852

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🧬 JoGo Online Haplotype Explorer TBC1D3E_chr17_38122951_38143868

JoGo Local Haplotype Explorer (on iGV) TBC1D3E_chr17_38122951_38143868

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 6)

CCoding Level Haplotype Info (Total: 17)

TTranscript Level Haplotype Info (Total: 4)

GGenebody Level Haplotype Info (Total: 32)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 17)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 21)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 32)

Haplotype Details by Sample (Haploid Level) (Total: 32)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 7)

CCoding Level Variants (Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 2)

GGenebody Level Haplotype Variants (Intron) (Total: 93)

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Annotation (Repeats)

Annotation (SNP Array)