Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	2543
ensemblid	ENSG00000205777.19
hgncid	4098
symbol	GAGE1
name	G antigen 1
refseq_nuc	NM_001040663.4
refseq_prot	NP_001035753.1
ensembl_nuc	ENST00000381700.11
ensembl_prot	ENSP00000371119.5
mane_status	MANE Select
chr	chrX
start	49599020
end	49608538
strand	+
ver	v1.2
region	chrX:49599020-49608538
region5000	chrX:49594020-49613538
regionname0	GAGE1_chrX_49599020_49608538
regionname5000	GAGE1_chrX_49594020_49613538

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/0	117	193	67	32	75	4	14	56	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002	0/1	116	98	4	22	51	6	14	40	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0003	0/0	116	7	1	1	2	0	3	2	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0004	0/0	117	4	2	0	2	0	0	2	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0005	0/0	117	2	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0006	0/0	116	1	1	0	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0007	0/0	34	1	1	0	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0008	0/0	57	1	1	0	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0009	0/0	117	1	0	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0010	0/0	107	1	0	0	1	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0011	0/0	117	1	0	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0012	0/0	117	1	0	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538

chapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/0	354	193	67	32	75	4	14	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0002	0/1	351	98	4	22	51	6	14	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0003	0/0	351	7	1	1	2	0	3	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0004	0/0	354	4	2	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0005	0/0	354	2	1	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0006	0/0	351	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0007	0/0	354	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0008	0/0	354	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0009	0/0	354	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0010	0/0	354	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0011	0/0	352	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
c0012	0/0	354	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538

thapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	2640	174	54	30	74	5	10	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0002	0/0	2640	49	3	6	30	2	8	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0003	0/1	2640	47	1	17	18	4	6	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0004	0/0	2640	12	10	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0005	0/0	2640	3	0	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0006	0/0	2640	3	0	0	0	0	3	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0007	0/0	2640	3	3	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0008	0/0	2640	2	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0009	0/0	2640	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0010	0/0	2642	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0011	0/0	2640	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0012	0/0	2638	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0013	0/0	2640	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0014	0/0	2640	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0015	0/0	2640	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0016	0/0	2640	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0017	0/0	2640	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0018	0/0	2640	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0019	0/0	2640	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0020	0/0	2640	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0021	0/0	2640	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0022	0/0	2640	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0023	0/0	2640	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0024	0/0	2640	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0025	0/0	2638	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
t0026	0/0	2640	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538

ghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	49	5	6	32	1	5	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0002	0/0	21	0	0	17	0	4	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0003	0/1	14	1	4	5	2	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0004	0/0	10	10	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0005	0/0	10	9	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0006	0/0	8	0	0	8	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0007	0/0	7	4	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0008	0/0	6	0	5	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0009	0/0	5	0	3	0	2	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0010	0/0	5	0	5	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0011	0/0	5	0	0	5	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0012	0/0	4	0	1	2	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0013	0/0	4	0	0	4	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0014	0/0	4	4	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0015	0/0	3	3	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0016	0/0	3	0	2	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0017	0/0	3	0	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0018	0/0	3	2	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0019	0/0	3	3	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0020	0/0	3	0	0	0	0	3	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0021	0/0	3	2	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0022	0/0	3	0	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0023	0/0	3	0	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0024	1/0	3	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0025	0/0	3	3	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0026	0/0	3	1	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0027	0/0	2	0	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0028	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0029	0/0	2	0	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0030	0/0	2	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0031	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0032	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0033	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0034	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0035	0/0	2	0	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0036	0/0	2	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0037	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0038	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0039	0/0	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0040	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0041	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0042	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0043	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0044	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0045	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0046	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0047	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0048	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0049	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0050	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0051	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0052	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0053	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0054	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0055	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0056	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0057	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0058	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0059	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0060	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0061	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0062	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0063	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0064	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0065	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0066	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0067	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0068	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0069	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0070	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0071	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0072	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0073	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0074	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0075	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0076	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0077	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0078	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0079	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0080	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0081	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0082	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0083	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0084	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0085	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0086	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0087	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0088	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0089	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0090	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0091	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0092	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0093	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0094	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0095	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0096	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0097	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0098	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0099	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0100	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0101	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0102	0/0	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0103	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0104	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0105	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0106	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0107	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0108	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0109	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0110	0/0	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0111	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0112	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0113	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0114	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0115	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0116	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0117	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0118	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0119	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0120	0/0	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0121	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0122	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0123	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0124	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0125	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0126	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0127	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0128	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0129	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0130	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0131	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0132	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0133	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0134	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0135	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0136	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0137	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0138	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
g0139	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/0	354	193	67	32	75	4	14	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002	0/1	351	98	4	22	51	6	14	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0003c0003	0/0	351	7	1	1	2	0	3	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0004c0004	0/0	354	4	2	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0005c0005	0/0	354	2	1	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0006c0006	0/0	351	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0007c0012	0/0	354	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0008c0010	0/0	354	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0009c0009	0/0	354	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0010c0011	0/0	352	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0011c0008	0/0	354	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0012c0007	0/0	354	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	2993	163	49	29	71	4	9	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0004	0/0	2993	12	10	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0006	0/0	2993	3	0	0	0	0	3	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0007	0/0	2993	3	3	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0008	0/0	2993	2	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0010	0/0	2995	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0013	0/0	2993	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0017	0/0	2993	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0018	0/0	2993	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0019	0/0	2993	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0020	0/0	2993	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0021	0/0	2993	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0022	0/0	2993	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0025	0/0	2991	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0001c0001t0026	0/0	2993	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002t0002	0/0	2990	44	3	6	28	2	5	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002t0003	0/1	2990	46	1	16	18	4	6	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002t0005	0/0	2990	3	0	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002t0009	0/0	2990	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002t0014	0/0	2990	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002t0015	0/0	2990	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002t0016	0/0	2990	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0002c0002t0023	0/0	2990	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0003c0003t0002	0/0	2990	5	0	0	2	0	3	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0003c0003t0003	0/0	2990	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0003c0003t0024	0/0	2990	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0004c0004t0001	0/0	2993	4	2	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0005c0005t0001	0/0	2993	2	1	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0006c0006t0011	0/0	2990	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0007c0012t0001	0/0	2993	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0008c0010t0001	0/0	2993	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0009c0009t0001	0/0	2993	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0010c0011t0012	0/0	2989	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0011c0008t0001	0/0	2993	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538
a0012c0007t0001	0/0	2993	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	copy fasta	chrX	49594020	49613538

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	43	3	6	29	1	4	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0005	0/0	9	8	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0006	0/0	7	0	0	7	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0007	0/0	6	3	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0008	0/0	6	0	5	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0010	0/0	5	0	5	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0011	0/0	5	0	0	5	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0014	0/0	4	4	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0018	0/0	3	2	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0019	0/0	2	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0021	0/0	3	2	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0022	0/0	3	0	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0023	0/0	2	0	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0024	1/0	3	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0025	0/0	3	3	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0026	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0030	0/0	2	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0032	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0033	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0034	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0035	0/0	2	0	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0061	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0077	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0078	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0079	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0083	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0084	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0085	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0086	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0087	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0088	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0090	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0091	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0092	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0093	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0094	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0095	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0096	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0097	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0098	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0099	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0100	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0101	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0102	0/0	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0104	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0105	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0106	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0107	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0108	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0109	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0110	0/0	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0112	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0114	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0115	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0116	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0117	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0119	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0121	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0122	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0123	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0124	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0125	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0126	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0130	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0131	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0133	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0001g0136	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0004g0004	0/0	9	9	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0004g0031	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0004g0082	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0006g0020	0/0	3	0	0	0	0	3	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0007g0001	0/0	2	2	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0007g0007	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0008g0134	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0008g0135	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0010g0023	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0013g0001	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0017g0006	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0018g0001	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0019g0103	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0020g0004	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0021g0111	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0022g0113	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0025g0059	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0001c0001t0026g0036	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0002	0/0	16	0	0	15	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0009	0/0	5	0	3	0	2	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0013	0/0	4	0	0	4	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0015	0/0	3	3	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0029	0/0	2	0	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0041	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0060	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0064	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0065	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0066	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0067	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0068	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0069	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0071	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0073	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0074	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0075	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0127	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0002g0129	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0003	0/1	12	1	4	3	2	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0012	0/0	4	0	1	2	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0016	0/0	3	0	2	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0017	0/0	3	0	0	3	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0027	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0028	0/0	2	0	2	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0037	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0038	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0039	0/0	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0040	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0042	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0043	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0044	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0045	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0046	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0047	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0048	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0049	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0051	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0052	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0053	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0055	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0056	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0057	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0058	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0072	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0003g0132	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0005g0003	0/0	2	0	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0005g0138	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0009g0002	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0014g0027	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0015g0137	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0016g0054	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0002c0002t0023g0002	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0003c0003t0002g0002	0/0	3	0	0	1	0	2	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0003c0003t0002g0070	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0003c0003t0002g0128	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0003c0003t0003g0050	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0003c0003t0024g0139	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0004c0004t0001g0005	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0004c0004t0001g0019	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0004c0004t0001g0026	0/0	2	0	0	2	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0005c0005t0001g0001	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0005c0005t0001g0089	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0006c0006t0011g0063	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0007c0012t0001g0081	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0008c0010t0001g0080	0/0	1	1	0	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0009c0009t0001g0001	0/0	1	0	0	0	0	1	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0010c0011t0012g0062	0/0	1	0	0	1	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0011c0008t0001g0118	0/0	1	0	1	0	0	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
a0012c0007t0001g0120	0/0	1	0	0	0	1	0	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0110	EUR	GBR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00099	hp2	a0002	c0002	t0003	g0016	EUR	GBR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00140	hp1	a0002	c0002	t0003	g0039	EUR	GBR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00280	hp1	a0002	c0002	t0003	g0003	EUR	FIN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00323	hp1	a0001	c0001	t0001	g0102	EUR	FIN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00408	hp1	a0002	c0002	t0002	g0013	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00423	hp1	a0001	c0001	t0001	g0092	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00423	hp2	a0002	c0002	t0002	g0002	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00544	hp1	a0001	c0001	t0001	g0035	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00544	hp2	a0005	c0005	t0001	g0001	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00597	hp1	a0002	c0002	t0002	g0075	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00597	hp2	a0001	c0001	t0001	g0123	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00609	hp1	a0002	c0002	t0003	g0003	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00621	hp1	a0002	c0002	t0002	g0002	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00639	hp1	a0001	c0001	t0001	g0008	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00639	hp2	a0002	c0002	t0003	g0037	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00642	hp1	a0002	c0002	t0003	g0016	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00673	hp1	a0001	c0001	t0001	g0008	EAS	CHS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00733	hp1	a0002	c0002	t0003	g0012	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00733	hp2	a0002	c0002	t0003	g0003	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00735	hp1	a0001	c0001	t0001	g0008	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00735	hp2	a0002	c0002	t0003	g0038	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00738	hp1	a0001	c0001	t0004	g0031	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00741	hp1	a0001	c0001	t0004	g0031	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG00741	hp2	a0011	c0008	t0001	g0118	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01069	hp2	a0001	c0001	t0001	g0033	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01071	hp1	a0002	c0002	t0002	g0009	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01071	hp2	a0001	c0001	t0001	g0033	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01081	hp1	a0001	c0001	t0001	g0018	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01081	hp2	a0002	c0002	t0003	g0016	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01099	hp1	a0003	c0003	t0003	g0050	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01106	hp1	a0002	c0002	t0003	g0046	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01167	hp1	a0001	c0001	t0001	g0034	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01168	hp1	a0002	c0002	t0003	g0028	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01169	hp1	a0001	c0001	t0001	g0034	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01169	hp2	a0002	c0002	t0003	g0028	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01175	hp2	a0002	c0002	t0003	g0056	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01192	hp1	a0002	c0002	t0003	g0053	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01243	hp2	a0001	c0001	t0001	g0005	AMR	PUR	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01255	hp1	a0002	c0002	t0002	g0041	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01256	hp2	a0001	c0001	t0001	g0008	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01257	hp1	a0001	c0001	t0001	g0032	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01257	hp2	a0001	c0001	t0001	g0010	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01258	hp2	a0001	c0001	t0001	g0032	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01261	hp2	a0001	c0001	t0001	g0061	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01346	hp1	a0001	c0001	t0001	g0121	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01346	hp2	a0002	c0002	t0003	g0003	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01358	hp2	a0001	c0001	t0001	g0001	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01433	hp1	a0002	c0002	t0003	g0003	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01496	hp1	a0001	c0001	t0001	g0010	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01496	hp2	a0001	c0001	t0001	g0008	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01515	hp1	a0002	c0002	t0002	g0009	EUR	IBS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01517	hp1	a0002	c0002	t0002	g0009	EUR	IBS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01517	hp2	a0012	c0007	t0001	g0120	EUR	IBS	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01884	hp1	a0001	c0001	t0001	g0096	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01884	hp2	a0001	c0001	t0004	g0004	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01891	hp1	a0001	c0001	t0001	g0136	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01891	hp2	a0005	c0005	t0001	g0089	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01928	hp2	a0001	c0001	t0001	g0010	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01934	hp2	a0001	c0001	t0001	g0097	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01943	hp1	a0001	c0001	t0001	g0008	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01952	hp1	a0002	c0002	t0003	g0132	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01978	hp1	a0002	c0002	t0003	g0047	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01978	hp2	a0002	c0002	t0002	g0069	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01993	hp1	a0002	c0002	t0002	g0009	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01993	hp2	a0001	c0001	t0001	g0093	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02004	hp1	a0001	c0001	t0021	g0111	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02004	hp2	a0001	c0001	t0001	g0010	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02027	hp2	a0001	c0001	t0001	g0023	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02040	hp1	a0002	c0002	t0002	g0002	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02055	hp1	a0001	c0001	t0008	g0134	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02074	hp1	a0001	c0001	t0001	g0106	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02080	hp1	a0001	c0001	t0001	g0022	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02080	hp2	a0002	c0002	t0002	g0002	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02083	hp1	a0002	c0002	t0002	g0002	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02129	hp1	a0002	c0002	t0014	g0027	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02132	hp2	a0001	c0001	t0001	g0035	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02135	hp2	a0002	c0002	t0002	g0013	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02148	hp1	a0002	c0002	t0003	g0003	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02148	hp2	a0001	c0001	t0001	g0091	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02165	hp1	a0001	c0001	t0001	g0006	EAS	CDX	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02165	hp2	a0001	c0001	t0001	g0105	EAS	CDX	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02257	hp1	a0001	c0001	t0001	g0024	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02257	hp2	a0001	c0001	t0026	g0036	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02258	hp1	a0001	c0001	t0001	g0131	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02280	hp1	a0007	c0012	t0001	g0081	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02280	hp2	a0001	c0001	t0004	g0004	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02293	hp1	a0001	c0001	t0001	g0010	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02451	hp1	a0006	c0006	t0011	g0063	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02451	hp2	a0001	c0001	t0007	g0001	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02523	hp1	a0001	c0001	t0001	g0023	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02572	hp1	a0001	c0001	t0001	g0014	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02602	hp1	a0001	c0001	t0001	g0095	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02615	hp1	a0001	c0001	t0001	g0005	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02615	hp2	a0001	c0001	t0001	g0007	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02622	hp1	a0003	c0003	t0024	g0139	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02622	hp2	a0001	c0001	t0001	g0025	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02630	hp1	a0001	c0001	t0001	g0094	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02630	hp2	a0001	c0001	t0001	g0108	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02647	hp1	a0001	c0001	t0004	g0004	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02683	hp1	a0001	c0001	t0001	g0115	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02683	hp2	a0002	c0002	t0002	g0073	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02698	hp2	a0001	c0001	t0025	g0059	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02717	hp2	a0001	c0001	t0001	g0014	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02735	hp1	a0002	c0002	t0002	g0002	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02738	hp1	a0002	c0002	t0016	g0054	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02809	hp1	a0001	c0001	t0001	g0125	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02809	hp2	a0002	c0002	t0002	g0015	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02818	hp1	a0002	c0002	t0002	g0015	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02818	hp2	a0001	c0001	t0001	g0099	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02886	hp1	a0001	c0001	t0004	g0004	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02886	hp2	a0001	c0001	t0001	g0124	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02895	hp1	a0001	c0001	t0004	g0004	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02896	hp1	a0001	c0001	t0001	g0005	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02896	hp2	a0001	c0001	t0004	g0082	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02897	hp1	a0001	c0001	t0004	g0004	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02897	hp2	a0001	c0001	t0001	g0005	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02922	hp1	a0001	c0001	t0001	g0014	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02922	hp2	a0001	c0001	t0001	g0014	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02965	hp1	a0001	c0001	t0001	g0025	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02970	hp1	a0001	c0001	t0007	g0001	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02970	hp2	a0001	c0001	t0001	g0005	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02976	hp1	a0001	c0001	t0001	g0007	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02976	hp2	a0001	c0001	t0001	g0079	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03017	hp1	a0002	c0002	t0002	g0067	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03041	hp1	a0001	c0001	t0001	g0005	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03041	hp2	a0004	c0004	t0001	g0019	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03098	hp1	a0004	c0004	t0001	g0005	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03130	hp1	a0001	c0001	t0004	g0004	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03139	hp1	a0001	c0001	t0001	g0077	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03195	hp1	a0001	c0001	t0004	g0004	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03195	hp2	a0001	c0001	t0001	g0030	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03209	hp1	a0001	c0001	t0001	g0019	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03225	hp1	a0002	c0002	t0002	g0015	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03453	hp1	a0001	c0001	t0001	g0024	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03453	hp2	a0001	c0001	t0008	g0135	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03486	hp1	a0001	c0001	t0001	g0098	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03486	hp2	a0001	c0001	t0001	g0126	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03490	hp1	a0002	c0002	t0015	g0137	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03491	hp1	a0001	c0001	t0006	g0020	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03491	hp2	a0009	c0009	t0001	g0001	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03492	hp1	a0001	c0001	t0006	g0020	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03516	hp1	a0001	c0001	t0001	g0084	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03516	hp2	a0002	c0002	t0003	g0003	AFR	ESN	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03540	hp1	a0001	c0001	t0001	g0005	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03540	hp2	a0001	c0001	t0001	g0019	AFR	GWD	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03579	hp2	a0001	c0001	t0001	g0005	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03654	hp1	a0002	c0002	t0003	g0003	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03669	hp1	a0002	c0002	t0003	g0048	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03669	hp2	a0003	c0003	t0002	g0002	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03688	hp1	a0002	c0002	t0003	g0045	SAS	STU	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03704	hp2	a0001	c0001	t0019	g0103	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03710	hp2	a0001	c0001	t0001	g0088	SAS	PJL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03831	hp1	a0001	c0001	t0001	g0085	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03834	hp1	a0002	c0002	t0002	g0071	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03834	hp2	a0002	c0002	t0023	g0002	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03927	hp1	a0002	c0002	t0002	g0129	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03927	hp2	a0003	c0003	t0002	g0128	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG04115	hp1	a0002	c0002	t0003	g0040	SAS	STU	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG04184	hp1	a0002	c0002	t0003	g0012	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG04184	hp2	a0001	c0001	t0001	g0087	SAS	BEB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG04199	hp1	a0002	c0002	t0003	g0049	SAS	STU	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG04228	hp1	a0001	c0001	t0006	g0020	SAS	STU	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18522	hp2	a0001	c0001	t0001	g0007	AFR	YRI	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18612	hp1	a0002	c0002	t0003	g0027	EAS	CHB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18906	hp1	a0001	c0001	t0001	g0005	AFR	YRI	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18906	hp2	a0001	c0001	t0004	g0004	AFR	YRI	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18940	hp1	a0001	c0001	t0001	g0006	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18941	hp1	a0002	c0002	t0002	g0060	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18941	hp2	a0002	c0002	t0005	g0138	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18942	hp1	a0001	c0001	t0001	g0011	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18942	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18943	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18945	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18948	hp2	a0001	c0001	t0001	g0006	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18949	hp1	a0001	c0001	t0001	g0086	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18950	hp1	a0002	c0002	t0009	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18952	hp1	a0002	c0002	t0005	g0003	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18953	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18954	hp2	a0001	c0001	t0001	g0022	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18956	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18957	hp1	a0001	c0001	t0001	g0109	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18957	hp2	a0002	c0002	t0003	g0051	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18959	hp1	a0002	c0002	t0003	g0012	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18960	hp1	a0001	c0001	t0001	g0011	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18961	hp1	a0002	c0002	t0002	g0068	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18963	hp1	a0001	c0001	t0001	g0100	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18963	hp2	a0001	c0001	t0001	g0083	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18964	hp1	a0001	c0001	t0018	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18964	hp2	a0002	c0002	t0003	g0012	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18965	hp1	a0002	c0002	t0003	g0017	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18966	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18967	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18968	hp1	a0001	c0001	t0001	g0114	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18968	hp2	a0001	c0001	t0001	g0104	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18969	hp2	a0003	c0003	t0002	g0070	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18970	hp2	a0001	c0001	t0001	g0006	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18975	hp1	a0001	c0001	t0001	g0011	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18975	hp2	a0001	c0001	t0017	g0006	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18977	hp1	a0002	c0002	t0002	g0013	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18978	hp1	a0001	c0001	t0001	g0006	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18978	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18979	hp1	a0002	c0002	t0002	g0064	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18981	hp1	a0002	c0002	t0003	g0044	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18981	hp2	a0001	c0001	t0001	g0022	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18982	hp2	a0001	c0001	t0013	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18984	hp1	a0002	c0002	t0002	g0074	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18985	hp1	a0002	c0002	t0003	g0058	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18989	hp1	a0002	c0002	t0003	g0052	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18990	hp2	a0001	c0001	t0001	g0090	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18994	hp1	a0002	c0002	t0002	g0013	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18995	hp1	a0002	c0002	t0003	g0072	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18998	hp1	a0001	c0001	t0001	g0130	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18998	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19000	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19003	hp1	a0002	c0002	t0003	g0003	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19003	hp2	a0003	c0003	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19004	hp1	a0002	c0002	t0003	g0055	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19005	hp2	a0001	c0001	t0001	g0133	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19007	hp2	a0001	c0001	t0001	g0007	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19009	hp2	a0001	c0001	t0010	g0023	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19010	hp1	a0002	c0002	t0003	g0017	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19012	hp1	a0001	c0001	t0001	g0101	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19030	hp1	a0008	c0010	t0001	g0080	AFR	LWK	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19030	hp2	a0001	c0001	t0001	g0021	AFR	LWK	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19043	hp1	a0001	c0001	t0001	g0025	AFR	LWK	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19056	hp1	a0002	c0002	t0002	g0066	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19058	hp1	a0002	c0002	t0002	g0029	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19059	hp1	a0002	c0002	t0003	g0057	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19059	hp2	a0001	c0001	t0001	g0076	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19060	hp2	a0001	c0001	t0001	g0011	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19062	hp1	a0004	c0004	t0001	g0026	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19063	hp2	a0001	c0001	t0001	g0011	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19064	hp1	a0002	c0002	t0005	g0003	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19065	hp1	a0001	c0001	t0001	g0006	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19065	hp2	a0001	c0001	t0001	g0007	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19066	hp2	a0004	c0004	t0001	g0026	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19067	hp1	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19068	hp1	a0002	c0002	t0002	g0127	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19074	hp1	a0001	c0001	t0001	g0117	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19074	hp2	a0002	c0002	t0003	g0003	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19076	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19077	hp1	a0010	c0011	t0012	g0062	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19077	hp2	a0002	c0002	t0002	g0029	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19081	hp1	a0001	c0001	t0001	g0006	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19081	hp2	a0002	c0002	t0002	g0002	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19082	hp1	a0001	c0001	t0001	g0112	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19083	hp1	a0002	c0002	t0003	g0042	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19085	hp2	a0001	c0001	t0001	g0107	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19086	hp1	a0002	c0002	t0003	g0017	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19087	hp1	a0001	c0001	t0001	g0116	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19087	hp2	a0002	c0002	t0003	g0043	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19091	hp1	a0001	c0001	t0001	g0007	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19240	hp1	a0001	c0001	t0001	g0018	AFR	YRI	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA19240	hp2	a0001	c0001	t0022	g0113	AFR	YRI	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA20129	hp1	a0001	c0001	t0001	g0021	AFR	ASW	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA20752	hp2	a0001	c0001	t0001	g0021	EUR	TSI	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA20805	hp1	a0002	c0002	t0003	g0003	EUR	TSI	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA20905	hp1	a0003	c0003	t0002	g0002	SAS	GIH	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01123	hp1	a0002	c0002	t0002	g0009	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG01123	hp2	a0002	c0002	t0002	g0065	AMR	CLM	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02109	hp1	a0001	c0001	t0001	g0119	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02109	hp2	a0001	c0001	t0001	g0030	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02559	hp1	a0001	c0001	t0001	g0122	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG02559	hp2	a0001	c0001	t0001	g0036	AFR	ACB	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG03471	hp1	a0001	c0001	t0001	g0078	AFR	MSL	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG06807	hp1	a0001	c0001	t0020	g0004	AFR	USA	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
HG06807	hp2	a0001	c0001	t0001	g0018	AFR	USA	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA20300	hp1	a0001	c0001	t0007	g0007	AFR	USA	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
NA21309	hp2	a0001	c0001	t0001	g0026	AFR	LWK	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
homoSapiens_chm13v2	hp1	a0002	c0002	t0003	g0003	REF	REF	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0024	REF	REF	GAGE1_chrX_49594020_49613538	GAGE1	chrX	49594020	49613538

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:49600167	T T	TG TG	1	a0010 a0010	1	NA19077.hp1 NA19077.hp1	splice_region_variant	LOW	c.-7dupG c.-7dupG		GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/5				INFO_REALIGN_3_PRIME	chrX	49600167
chrX:49600198	CTAT CTAT	C C	3	a0002 a0003 a0006 a0002 a0003 a0006	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	disruptive_inframe_deletion	MODERATE	c.29_31delATT c.29_31delATT	p.Tyr10del p.Tyr10del	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/5	145/2993	29/354	10/117	INFO_REALIGN_3_PRIME	chrX	49600198
chrX:49600205	T T	C C	3	a0002 a0003 a0006 a0002 a0003 a0006	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.31T>C c.31T>C	p.Trp11Arg p.Trp11Arg	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/5	147/2993	31/354	11/117		chrX	49600205
chrX:49600229	C C	G G	3	a0002 a0003 a0006 a0002 a0003 a0006	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.55C>G c.55C>G	p.Gln19Glu p.Gln19Glu	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/5	171/2993	55/354	19/117		chrX	49600229
chrX:49600235	C C	T T	1	a0012 a0012	1	HG01517.hp2 HG01517.hp2	missense_variant	MODERATE	c.61C>T c.61C>T	p.Pro21Ser p.Pro21Ser	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/5	177/2993	61/354	21/117		chrX	49600235
chrX:49600727	G G	A A	1	a0011 a0011	1	HG00741.hp2 HG00741.hp2	missense_variant	MODERATE	c.88G>A c.88G>A	p.Glu30Lys p.Glu30Lys	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/5	204/2993	88/354	30/117		chrX	49600727
chrX:49600742	G G	T T	1	a0007 a0007	1	HG02280.hp1 HG02280.hp1	stop_gained	HIGH	c.103G>T c.103G>T	p.Glu35* p.Glu35*	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/5	219/2993	103/354	35/117		chrX	49600742
chrX:49600752	CA CA	C C	1	a0010 a0010	1	NA19077.hp1 NA19077.hp1	frameshift_variant	HIGH	c.114delA c.114delA	p.Ala39fs p.Ala39fs	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/5	230/2993	114/354	38/117		chrX	49600752
chrX:49600811	G G	T T	1	a0008 a0008	1	NA19030.hp1 NA19030.hp1	stop_gained	HIGH	c.172G>T c.172G>T	p.Glu58* p.Glu58*	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/5	288/2993	172/354	58/117		chrX	49600811
chrX:49600813	G G	C C	1	a0006 a0006	1	HG02451.hp1 HG02451.hp1	missense_variant	MODERATE	c.174G>C c.174G>C	p.Glu58Asp p.Glu58Asp	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/5	290/2993	174/354	58/117		chrX	49600813
chrX:49600817	G G	C C	1	a0005 a0005	2	HG00544.hp2 HG01891.hp2 HG00544.hp2 HG01891.hp2	missense_variant	MODERATE	c.178G>C c.178G>C	p.Glu60Gln p.Glu60Gln	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/5	294/2993	178/354	60/117		chrX	49600817
chrX:49603666	A A	AG AG	1	a0002 a0002	1	NA18985.hp1 NA18985.hp1	frameshift_variant&splice_region_variant	HIGH	c.207dupG c.207dupG	p.Pro70fs p.Pro70fs	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/5	324/2993	208/354	70/117	INFO_REALIGN_3_PRIME	chrX	49603666
chrX:49603683	C C	A A	1	a0009 a0009	1	HG03491.hp2 HG03491.hp2	missense_variant	MODERATE	c.221C>A c.221C>A	p.Ala74Asp p.Ala74Asp	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/5	337/2993	221/354	74/117		chrX	49603683
chrX:49603685	G G	C C	2	a0003 a0004 a0003 a0004	11	HG01099.hp1 HG02622.hp1 HG03041.hp2 others(8): Show HG01099.hp1 HG02622.hp1 HG03041.hp2 HG03098.hp1 HG03669.hp2 HG03927.hp2 NA18969.hp2 NA19003.hp2 NA19062.hp1 NA19066.hp2 NA20905.hp1	missense_variant	MODERATE	c.223G>C c.223G>C	p.Asp75His p.Asp75His	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/5	339/2993	223/354	75/117		chrX	49603685
chrX:49603765	TC TC	T T	1	a0010 a0010	1	NA19077.hp1 NA19077.hp1	frameshift_variant	HIGH	c.305delC c.305delC	p.Pro102fs p.Pro102fs	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/5	421/2993	305/354	102/117	INFO_REALIGN_3_PRIME	chrX	49603765

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:49600219	G G	A A	3	a0002c0002 a0003c0003 a0006c0006 a0002c0002 a0003c0003 a0006c0006	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.45G>A c.45G>A	p.Arg15Arg p.Arg15Arg	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/5	161/2993	45/354	15/117	chrX	49600219
chrX:49600225	T T	C C	3	a0002c0002 a0003c0003 a0006c0006 a0002c0002 a0003c0003 a0006c0006	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.51T>C c.51T>C	p.Tyr17Tyr p.Tyr17Tyr	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/5	167/2993	51/354	17/117	chrX	49600225
chrX:49600234	T T	C C	1	a0012c0007 a0012c0007	1	HG01517.hp2 HG01517.hp2	synonymous_variant	LOW	c.60T>C c.60T>C	p.Pro20Pro p.Pro20Pro	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/5	176/2993	60/354	20/117	chrX	49600234

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:49599031	G G	A A	1	a0002c0002t0009 a0002c0002t0009	1	NA18950.hp1 NA18950.hp1	5_prime_UTR_variant	MODIFIER	c.-105G>A c.-105G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/5	1144		chrX	49599031
chrX:49599032	G G	GA GA	1	a0001c0001t0010 a0001c0001t0010	1	NA19009.hp2 NA19009.hp2	5_prime_UTR_variant	MODIFIER	c.-104_-103insA c.-104_-103insA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/5	1142		chrX	49599032
chrX:49599034	C C	A A	1	a0006c0006t0011 a0006c0006t0011	1	HG02451.hp1 HG02451.hp1	5_prime_UTR_variant	MODIFIER	c.-102C>A c.-102C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/5	1141		chrX	49599034
chrX:49599045	C C	T T	1	a0001c0001t0026 a0001c0001t0026	1	HG02257.hp2 HG02257.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-91C>T c.-91C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/5			chrX	49599045
chrX:49599048	GA GA	G G	1	a0001c0001t0025 a0001c0001t0025	1	HG02698.hp2 HG02698.hp2	5_prime_UTR_variant	MODIFIER	c.-86delA c.-86delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/5	1125	INFO_REALIGN_3_PRIME	chrX	49599048
chrX:49599102	C C	CT CT	1	a0001c0001t0010 a0001c0001t0010	1	NA19009.hp2 NA19009.hp2	5_prime_UTR_variant	MODIFIER	c.-29dupT c.-29dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/5	1067	INFO_REALIGN_3_PRIME	chrX	49599102
chrX:49599102	CT CT	C C	1	a0001c0001t0025 a0001c0001t0025	1	HG02698.hp2 HG02698.hp2	5_prime_UTR_variant	MODIFIER	c.-29delT c.-29delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/5	1068	INFO_REALIGN_3_PRIME	chrX	49599102
chrX:49606016	A A	T T	1	a0003c0003t0024 a0003c0003t0024	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.1A>T c.1A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1		chrX	49606016
chrX:49606042	C C	G G	1	a0002c0002t0023 a0002c0002t0023	1	HG03834.hp2 HG03834.hp2	3_prime_UTR_variant	MODIFIER	c.27C>G c.27C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	27		chrX	49606042
chrX:49606061	T T	C C	1	a0001c0001t0013 a0001c0001t0013	1	NA18982.hp2 NA18982.hp2	3_prime_UTR_variant	MODIFIER	c.46T>C c.46T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	46		chrX	49606061
chrX:49606175	C C	A A	13	a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 others(10): Show a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 a0002c0002t0005 a0002c0002t0009 a0002c0002t0014 a0002c0002t0015 a0002c0002t0016 a0002c0002t0023 a0003c0003t0002 a0003c0003t0003 a0003c0003t0024 a0006c0006t0011	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.160C>A c.160C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	160		chrX	49606175
chrX:49606175	C C	G G	1	a0001c0001t0022 a0001c0001t0022	1	NA19240.hp2 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.160C>G c.160C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	160		chrX	49606175
chrX:49606184	A A	T T	12	a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 others(9): Show a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 a0002c0002t0005 a0002c0002t0009 a0002c0002t0014 a0002c0002t0015 a0002c0002t0016 a0002c0002t0023 a0003c0003t0002 a0003c0003t0003 a0006c0006t0011	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.169A>T c.169A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	169		chrX	49606184
chrX:49606238	A A	C C	1	a0001c0001t0008 a0001c0001t0008	2	HG02055.hp1 HG03453.hp2 HG02055.hp1 HG03453.hp2	3_prime_UTR_variant	MODIFIER	c.223A>C c.223A>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	223		chrX	49606238
chrX:49606298	G G	A A	12	a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 others(9): Show a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 a0002c0002t0005 a0002c0002t0009 a0002c0002t0014 a0002c0002t0015 a0002c0002t0016 a0002c0002t0023 a0003c0003t0002 a0003c0003t0003 a0006c0006t0011	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.283G>A c.283G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	283		chrX	49606298
chrX:49606320	T T	C C	13	a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 others(10): Show a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 a0002c0002t0005 a0002c0002t0009 a0002c0002t0014 a0002c0002t0015 a0002c0002t0016 a0002c0002t0023 a0003c0003t0002 a0003c0003t0003 a0003c0003t0024 a0006c0006t0011	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.305T>C c.305T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	305		chrX	49606320
chrX:49606352	CT CT	C C	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.343delT c.343delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	343	INFO_REALIGN_3_PRIME	chrX	49606352
chrX:49606395	A A	AT AT	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.384dupT c.384dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	385	INFO_REALIGN_3_PRIME	chrX	49606395
chrX:49606401	G G	T T	1	a0001c0001t0021 a0001c0001t0021	1	HG02004.hp1 HG02004.hp1	3_prime_UTR_variant	MODIFIER	c.386G>T c.386G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	386		chrX	49606401
chrX:49606415	C C	CT CT	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.407dupT c.407dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	408	INFO_REALIGN_3_PRIME	chrX	49606415
chrX:49606520	A A	G G	1	a0002c0002t0016 a0002c0002t0016	1	HG02738.hp1 HG02738.hp1	3_prime_UTR_variant	MODIFIER	c.505A>G c.505A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	505		chrX	49606520
chrX:49606566	C C	T T	1	a0003c0003t0024 a0003c0003t0024	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.551C>T c.551C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	551		chrX	49606566
chrX:49606611	G G	GA GA	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.599dupA c.599dupA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	600	INFO_REALIGN_3_PRIME	chrX	49606611
chrX:49606660	T T	TG TG	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.646dupG c.646dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	647	INFO_REALIGN_3_PRIME	chrX	49606660
chrX:49606821	CT CT	C C	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.808delT c.808delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	808	INFO_REALIGN_3_PRIME	chrX	49606821
chrX:49606883	TTG TTG	T T	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.869_870delTG c.869_870delTG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	869		chrX	49606883
chrX:49606886	A A	G G	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.871A>G c.871A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	871		chrX	49606886
chrX:49606933	TA TA	T T	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.920delA c.920delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	920	INFO_REALIGN_3_PRIME	chrX	49606933
chrX:49607075	G G	A A	1	a0002c0002t0014 a0002c0002t0014	1	HG02129.hp1 HG02129.hp1	3_prime_UTR_variant	MODIFIER	c.1060G>A c.1060G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1060		chrX	49607075
chrX:49607150	T T	G G	1	a0002c0002t0005 a0002c0002t0005	3	NA18941.hp2 NA18952.hp1 NA19064.hp1 NA18941.hp2 NA18952.hp1 NA19064.hp1	3_prime_UTR_variant	MODIFIER	c.1135T>G c.1135T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1135		chrX	49607150
chrX:49607158	GTA GTA	G G	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1145_1146delAT c.1145_1146delAT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1145	INFO_REALIGN_3_PRIME	chrX	49607158
chrX:49607190	AC AC	A A	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1176delC c.1176delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1176		chrX	49607190
chrX:49607235	TG TG	T T	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1223delG c.1223delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1223	INFO_REALIGN_3_PRIME	chrX	49607235
chrX:49607246	G G	GA GA	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1233dupA c.1233dupA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1234	INFO_REALIGN_3_PRIME	chrX	49607246
chrX:49607425	TA TA	T T	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1414delA c.1414delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1414	INFO_REALIGN_3_PRIME	chrX	49607425
chrX:49607435	TG TG	T T	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1422delG c.1422delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1422	INFO_REALIGN_3_PRIME	chrX	49607435
chrX:49607456	C C	T T	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1441C>T c.1441C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1441		chrX	49607456
chrX:49607458	A A	C C	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1443A>C c.1443A>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1443		chrX	49607458
chrX:49607459	T T	A A	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1444T>A c.1444T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1444		chrX	49607459
chrX:49607499	A A	AG AG	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1487dupG c.1487dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1488	INFO_REALIGN_3_PRIME	chrX	49607499
chrX:49607541	C C	T T	2	a0001c0001t0004 a0001c0001t0020 a0001c0001t0004 a0001c0001t0020	13	HG00738.hp1 HG00741.hp1 HG01884.hp2 others(10): Show HG00738.hp1 HG00741.hp1 HG01884.hp2 HG02280.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03130.hp1 HG03195.hp1 HG06807.hp1 NA18906.hp2	3_prime_UTR_variant	MODIFIER	c.1526C>T c.1526C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1526		chrX	49607541
chrX:49607570	T T	TG TG	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1556dupG c.1556dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1557	INFO_REALIGN_3_PRIME	chrX	49607570
chrX:49607586	T T	TC TC	1	a0010c0011t0012 a0010c0011t0012	1	NA19077.hp1 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.1573dupC c.1573dupC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1574	INFO_REALIGN_3_PRIME	chrX	49607586
chrX:49607597	A A	G G	1	a0001c0001t0006 a0001c0001t0006	3	HG03491.hp1 HG03492.hp1 HG04228.hp1 HG03491.hp1 HG03492.hp1 HG04228.hp1	3_prime_UTR_variant	MODIFIER	c.1582A>G c.1582A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1582		chrX	49607597
chrX:49607700	A A	C C	1	a0001c0001t0019 a0001c0001t0019	1	HG03704.hp2 HG03704.hp2	3_prime_UTR_variant	MODIFIER	c.1685A>C c.1685A>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1685		chrX	49607700
chrX:49607806	C C	T T	6	a0002c0002t0003 a0002c0002t0005 a0002c0002t0014 others(3): Show a0002c0002t0003 a0002c0002t0005 a0002c0002t0014 a0002c0002t0015 a0002c0002t0016 a0003c0003t0003	53	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(50): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01346.hp2 HG01433.hp1 HG01952.hp1 HG01978.hp1 HG02129.hp1 HG02148.hp1 HG02738.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp2 NA18952.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp2 NA18965.hp1 NA18981.hp1 NA18985.hp1 NA18989.hp1 NA18995.hp1 NA19003.hp1 NA19004.hp1 NA19010.hp1 NA19059.hp1 NA19064.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.1791C>T c.1791C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1791		chrX	49607806
chrX:49607826	G G	T T	1	a0001c0001t0007 a0001c0001t0007	3	HG02451.hp2 HG02970.hp1 NA20300.hp1 HG02451.hp2 HG02970.hp1 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.1811G>T c.1811G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	1811		chrX	49607826
chrX:49608061	T T	A A	1	a0002c0002t0015 a0002c0002t0015	1	HG03490.hp1 HG03490.hp1	3_prime_UTR_variant	MODIFIER	c.2046T>A c.2046T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	2046		chrX	49608061
chrX:49608112	T T	A A	1	a0003c0003t0024 a0003c0003t0024	1	HG02622.hp1 HG02622.hp1	3_prime_UTR_variant	MODIFIER	c.2097T>A c.2097T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	2097		chrX	49608112
chrX:49608222	C C	G G	1	a0001c0001t0018 a0001c0001t0018	1	NA18964.hp1 NA18964.hp1	3_prime_UTR_variant	MODIFIER	c.2207C>G c.2207C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	2207		chrX	49608222
chrX:49608294	C C	T T	1	a0001c0001t0020 a0001c0001t0020	1	HG06807.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.2279C>T c.2279C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	2279		chrX	49608294
chrX:49608428	A A	G G	1	a0001c0001t0017 a0001c0001t0017	1	NA18975.hp2 NA18975.hp2	3_prime_UTR_variant	MODIFIER	c.2413A>G c.2413A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	5/5	2413		chrX	49608428

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:49599148	T T	G G	31	a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0003g0003 others(28): Show a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0005g0003 a0002c0002t0014g0027 a0002c0002t0016g0054 a0003c0003t0003g0050	53	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(50): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01978.hp1 HG02129.hp1 HG02148.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03225.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18952.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp2 NA18965.hp1 NA18981.hp1 NA18985.hp1 NA18989.hp1 NA19003.hp1 NA19004.hp1 NA19010.hp1 NA19059.hp1 NA19064.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-9+21T>G c.-9+21T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599148
chrX:49599165	T T	TA TA	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.-9+38_-9+39insA c.-9+38_-9+39insA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599165
chrX:49599208	G G	A A	1	a0002c0002t0002g0060 a0002c0002t0002g0060	1	NA18941.hp1 NA18941.hp1	intron_variant	MODIFIER	c.-9+81G>A c.-9+81G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599208
chrX:49599214	TG TG	T T	1	a0002c0002t0003g0058 a0002c0002t0003g0058	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.-9+89delG c.-9+89delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599214
chrX:49599228	C C	G G	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.-9+101C>G c.-9+101C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599228
chrX:49599228	C C	T T	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-9+101C>T c.-9+101C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599228
chrX:49599229	G G	C C	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.-9+102G>C c.-9+102G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599229
chrX:49599230	A A	G G	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.-9+103A>G c.-9+103A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599230
chrX:49599235	GA GA	G G	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.-9+110delA c.-9+110delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599235
chrX:49599262	C C	G G	30	a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0003g0003 others(27): Show a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0003g0003 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0003c0003t0003g0050 a0003c0003t0024g0139	49	HG00099.hp2 HG00280.hp1 HG00609.hp1 others(46): Show HG00099.hp2 HG00280.hp1 HG00609.hp1 HG00642.hp1 HG00733.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01978.hp1 HG02129.hp1 HG02148.hp1 HG02622.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp2 NA18952.hp1 NA18957.hp2 NA18965.hp1 NA18981.hp1 NA18985.hp1 NA18989.hp1 NA19003.hp1 NA19004.hp1 NA19010.hp1 NA19059.hp1 NA19064.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-9+135C>G c.-9+135C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599262
chrX:49599287	G G	A A	1	a0001c0001t0001g0061 a0001c0001t0001g0061	1	HG01261.hp2 HG01261.hp2	intron_variant	MODIFIER	c.-9+160G>A c.-9+160G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599287
chrX:49599303	A A	AG AG	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.-9+180dupG c.-9+180dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599303
chrX:49599303	AG AG	A A	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.-9+180delG c.-9+180delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599303
chrX:49599336	AG AG	A A	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.-9+213delG c.-9+213delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599336
chrX:49599353	G G	T T	7	a0001c0001t0001g0026 a0001c0001t0001g0036 a0001c0001t0001g0136 others(4): Show a0001c0001t0001g0026 a0001c0001t0001g0036 a0001c0001t0001g0136 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0026g0036 a0004c0004t0001g0026	8	HG01891.hp1 HG02055.hp1 HG02257.hp2 others(5): Show HG01891.hp1 HG02055.hp1 HG02257.hp2 HG02559.hp2 HG03453.hp2 NA19062.hp1 NA19066.hp2 NA21309.hp2	intron_variant	MODIFIER	c.-9+226G>T c.-9+226G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599353
chrX:49599366	C C	T T	1	a0001c0001t0001g0133 a0001c0001t0001g0133	1	NA19005.hp2 NA19005.hp2	intron_variant	MODIFIER	c.-9+239C>T c.-9+239C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599366
chrX:49599381	TG TG	T T	2	a0001c0001t0025g0059 a0002c0002t0003g0057 a0001c0001t0025g0059 a0002c0002t0003g0057	2	HG02698.hp2 NA19059.hp1 HG02698.hp2 NA19059.hp1	intron_variant	MODIFIER	c.-9+260delG c.-9+260delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599381
chrX:49599418	C C	T T	1	a0002c0002t0003g0132 a0002c0002t0003g0132	1	HG01952.hp1 HG01952.hp1	intron_variant	MODIFIER	c.-9+291C>T c.-9+291C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599418
chrX:49599422	A A	AC AC	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.-9+296dupC c.-9+296dupC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599422
chrX:49599441	T T	TG TG	1	a0001c0001t0001g0131 a0001c0001t0001g0131	1	HG02258.hp1 HG02258.hp1	intron_variant	MODIFIER	c.-9+318dupG c.-9+318dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599441
chrX:49599445	G G	GC GC	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.-9+323dupC c.-9+323dupC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599445
chrX:49599450	C C	T T	1	a0002c0002t0003g0132 a0002c0002t0003g0132	1	HG01952.hp1 HG01952.hp1	intron_variant	MODIFIER	c.-9+323C>T c.-9+323C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599450
chrX:49599453	C C	CG CG	5	a0001c0001t0001g0130 a0002c0002t0002g0127 a0002c0002t0002g0129 others(2): Show a0001c0001t0001g0130 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0056 a0003c0003t0002g0128	5	HG01175.hp2 HG03927.hp1 HG03927.hp2 others(2): Show HG01175.hp2 HG03927.hp1 HG03927.hp2 NA18998.hp1 NA19068.hp1	intron_variant	MODIFIER	c.-9+331dupG c.-9+331dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599453
chrX:49599465	G G	A A	59	a0001c0001t0008g0134 a0001c0001t0008g0135 a0002c0002t0002g0002 others(56): Show a0001c0001t0008g0134 a0001c0001t0008g0135 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02055.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03453.hp2 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-9+338G>A c.-9+338G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599465
chrX:49599487	C C	A A	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-9+360C>A c.-9+360C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599487
chrX:49599491	TG TG	T T	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	NA19059.hp2 NA19059.hp2	intron_variant	MODIFIER	c.-9+367delG c.-9+367delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599491
chrX:49599502	C C	G G	59	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 others(56): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-9+375C>G c.-9+375C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599502
chrX:49599510	C C	T T	1	a0001c0001t0001g0136 a0001c0001t0001g0136	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.-9+383C>T c.-9+383C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599510
chrX:49599513	G G	GC GC	7	a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0129 others(4): Show a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0129 a0002c0002t0003g0039 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0016g0054	7	HG00140.hp1 HG00597.hp1 HG01192.hp1 others(4): Show HG00140.hp1 HG00597.hp1 HG01192.hp1 HG02738.hp1 HG03927.hp1 NA18984.hp1 NA18989.hp1	intron_variant	MODIFIER	c.-9+387dupC c.-9+387dupC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599513
chrX:49599515	G G	C C	59	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 others(56): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-9+388G>C c.-9+388G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599515
chrX:49599515	G G	GC GC	13	a0001c0001t0001g0019 a0001c0001t0001g0083 a0001c0001t0004g0004 others(10): Show a0001c0001t0001g0019 a0001c0001t0001g0083 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0006g0020 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0001c0001t0025g0059 a0004c0004t0001g0019 a0007c0012t0001g0081 a0008c0010t0001g0080	25	HG00738.hp1 HG00741.hp1 HG01884.hp2 others(22): Show HG00738.hp1 HG00741.hp1 HG01884.hp2 HG02055.hp1 HG02280.hp1 HG02280.hp2 HG02647.hp1 HG02698.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp1 HG03209.hp1 HG03453.hp2 HG03491.hp1 HG03492.hp1 HG03540.hp2 HG04228.hp1 HG06807.hp1 NA18906.hp2 NA18963.hp2 NA19030.hp1	intron_variant	MODIFIER	c.-9+393dupC c.-9+393dupC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599515
chrX:49599521	T T	C C	76	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 others(73): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0083 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0006g0020 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0004c0004t0001g0019 a0006c0006t0011g0063 a0007c0012t0001g0081 a0008c0010t0001g0080	138	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(135): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02055.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02622.hp1 HG02647.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19030.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA19240.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-9+394T>C c.-9+394T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599521
chrX:49599521	T T	G G	1	a0001c0001t0001g0136 a0001c0001t0001g0136	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.-9+394T>G c.-9+394T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599521
chrX:49599538	G G	A A	1	a0001c0001t0001g0084 a0001c0001t0001g0084	1	HG03516.hp1 HG03516.hp1	intron_variant	MODIFIER	c.-9+411G>A c.-9+411G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599538
chrX:49599607	A A	AG AG	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.-9+481dupG c.-9+481dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599607
chrX:49599623	C C	T T	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.-9+496C>T c.-9+496C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599623
chrX:49599632	CA CA	C C	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.-9+508delA c.-9+508delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599632
chrX:49599645	A A	AG AG	3	a0001c0001t0001g0085 a0001c0001t0025g0059 a0002c0002t0003g0040 a0001c0001t0001g0085 a0001c0001t0025g0059 a0002c0002t0003g0040	3	HG02698.hp2 HG03831.hp1 HG04115.hp1 HG02698.hp2 HG03831.hp1 HG04115.hp1	intron_variant	MODIFIER	c.-8-515dupG c.-8-515dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599645
chrX:49599647	G G	T T	8	a0001c0001t0001g0025 a0001c0001t0001g0035 a0001c0001t0001g0122 others(5): Show a0001c0001t0001g0025 a0001c0001t0001g0035 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0130	11	HG00544.hp1 HG00597.hp2 HG02132.hp2 others(8): Show HG00544.hp1 HG00597.hp2 HG02132.hp2 HG02559.hp1 HG02622.hp2 HG02809.hp1 HG02886.hp2 HG02965.hp1 HG03486.hp2 NA18998.hp1 NA19043.hp1	intron_variant	MODIFIER	c.-9+520G>T c.-9+520G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599647
chrX:49599650	G G	C C	3	a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078	4	HG02109.hp2 HG03139.hp1 HG03195.hp2 others(1): Show HG02109.hp2 HG03139.hp1 HG03195.hp2 HG03471.hp1	intron_variant	MODIFIER	c.-8-517G>C c.-8-517G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599650
chrX:49599653	T T	TG TG	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	NA19059.hp2 NA19059.hp2	intron_variant	MODIFIER	c.-8-513dupG c.-8-513dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599653
chrX:49599666	G G	C C	16	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 others(13): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0086 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0082 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0004c0004t0001g0019 a0007c0012t0001g0081 a0008c0010t0001g0080	28	HG01081.hp1 HG01884.hp2 HG01891.hp1 others(25): Show HG01081.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18949.hp1 NA19030.hp1 NA19240.hp1	intron_variant	MODIFIER	c.-8-501G>C c.-8-501G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599666
chrX:49599692	AT AT	A A	2	a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0087 a0001c0001t0001g0088	2	HG03710.hp2 HG04184.hp2 HG03710.hp2 HG04184.hp2	intron_variant	MODIFIER	c.-8-474delT c.-8-474delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599692
chrX:49599698	A A	G G	3	a0002c0002t0003g0017 a0002c0002t0003g0051 a0002c0002t0003g0055 a0002c0002t0003g0017 a0002c0002t0003g0051 a0002c0002t0003g0055	5	NA18957.hp2 NA18965.hp1 NA19004.hp1 others(2): Show NA18957.hp2 NA18965.hp1 NA19004.hp1 NA19010.hp1 NA19086.hp1	intron_variant	MODIFIER	c.-8-469A>G c.-8-469A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599698
chrX:49599762	G G	GA GA	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	NA19059.hp2 NA19059.hp2	intron_variant	MODIFIER	c.-8-404dupA c.-8-404dupA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599762
chrX:49599774	C C	T T	1	a0001c0001t0001g0126 a0001c0001t0001g0126	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.-8-393C>T c.-8-393C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599774
chrX:49599801	T T	G G	45	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 others(42): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0086 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0006g0020 a0001c0001t0020g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0042 a0002c0002t0003g0072 a0002c0002t0009g0002 a0002c0002t0015g0137 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0024g0139 a0004c0004t0001g0019 a0005c0005t0001g0089 a0006c0006t0011g0063 a0007c0012t0001g0081 a0008c0010t0001g0080	87	HG00408.hp1 HG00423.hp2 HG00597.hp1 others(84): Show HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00621.hp1 HG00738.hp1 HG00741.hp1 HG01071.hp1 HG01081.hp1 HG01123.hp1 HG01123.hp2 HG01255.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02135.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02622.hp1 HG02647.hp1 HG02683.hp2 HG02735.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03540.hp2 HG03669.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18949.hp1 NA18950.hp1 NA18953.hp1 NA18956.hp1 NA18961.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp2 NA19030.hp1 NA19056.hp1 NA19058.hp1 NA19067.hp1 NA19068.hp1 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19240.hp1 NA20905.hp1	intron_variant	MODIFIER	c.-8-366T>G c.-8-366T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599801
chrX:49599802	TC TC	T T	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.-8-362delC c.-8-362delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599802
chrX:49599813	G G	C C	2	a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0002g0015 a0002c0002t0002g0041	4	HG01255.hp1 HG02809.hp2 HG02818.hp1 others(1): Show HG01255.hp1 HG02809.hp2 HG02818.hp1 HG03225.hp1	intron_variant	MODIFIER	c.-8-354G>C c.-8-354G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599813
chrX:49599826	TG TG	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.-8-338delG c.-8-338delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599826
chrX:49599868	G G	C C	5	a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0051 others(2): Show a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0051 a0002c0002t0003g0055 a0002c0002t0014g0027	7	HG02129.hp1 NA18612.hp1 NA18957.hp2 others(4): Show HG02129.hp1 NA18612.hp1 NA18957.hp2 NA18965.hp1 NA19004.hp1 NA19010.hp1 NA19086.hp1	intron_variant	MODIFIER	c.-8-299G>C c.-8-299G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49599868
chrX:49599917	TC TC	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.-8-248delC c.-8-248delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599917
chrX:49599997	GA GA	G G	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.-8-168delA c.-8-168delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49599997
chrX:49600039	T T	G G	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-8-128T>G c.-8-128T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49600039
chrX:49600046	TG TG	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.-8-118delG c.-8-118delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	49600046
chrX:49600056	T T	C C	59	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 others(56): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-8-111T>C c.-8-111T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49600056
chrX:49600087	G G	A A	1	a0008c0010t0001g0080 a0008c0010t0001g0080	1	NA19030.hp1 NA19030.hp1	intron_variant	MODIFIER	c.-8-80G>A c.-8-80G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49600087
chrX:49600087	G G	C C	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.-8-80G>C c.-8-80G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49600087
chrX:49600090	A A	T T	59	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 others(56): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-8-77A>T c.-8-77A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49600090
chrX:49600128	C C	G G	74	a0001c0001t0001g0018 a0001c0001t0001g0025 a0001c0001t0001g0030 others(71): Show a0001c0001t0001g0018 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0006g0020 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063 a0007c0012t0001g0081 a0008c0010t0001g0080	137	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(134): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02055.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03017.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA19240.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.-8-39C>G c.-8-39C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49600128
chrX:49600134	C C	T T	1	a0002c0002t0002g0073 a0002c0002t0002g0073	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.-8-33C>T c.-8-33C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	1/4		chrX	49600134
chrX:49600280	C C	T T	1	a0001c0001t0001g0121 a0001c0001t0001g0121	1	HG01346.hp1 HG01346.hp1	intron_variant	MODIFIER	c.84+22C>T c.84+22C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600280
chrX:49600303	TA TA	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.84+47delA c.84+47delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600303
chrX:49600321	C C	T T	59	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 others(56): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	106	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.84+63C>T c.84+63C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600321
chrX:49600332	T T	TG TG	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.84+75dupG c.84+75dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600332
chrX:49600365	TA TA	T T	2	a0010c0011t0012g0062 a0012c0007t0001g0120 a0010c0011t0012g0062 a0012c0007t0001g0120	2	HG01517.hp2 NA19077.hp1 HG01517.hp2 NA19077.hp1	intron_variant	MODIFIER	c.84+113delA c.84+113delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600365
chrX:49600383	T T	G G	1	a0001c0001t0001g0025 a0001c0001t0001g0025	3	HG02622.hp2 HG02965.hp1 NA19043.hp1 HG02622.hp2 HG02965.hp1 NA19043.hp1	intron_variant	MODIFIER	c.84+125T>G c.84+125T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600383
chrX:49600412	AT AT	A A	33	a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 others(30): Show a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0003c0003t0003g0050 a0010c0011t0012g0062	53	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(50): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01346.hp2 HG01433.hp1 HG01952.hp1 HG01978.hp1 HG02129.hp1 HG02148.hp1 HG02738.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp2 NA18952.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp2 NA18965.hp1 NA18981.hp1 NA18985.hp1 NA18989.hp1 NA19003.hp1 NA19004.hp1 NA19010.hp1 NA19059.hp1 NA19064.hp1 NA19074.hp2 NA19077.hp1 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.84+164delT c.84+164delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600412
chrX:49600461	T T	A A	1	a0001c0001t0001g0090 a0001c0001t0001g0090	1	NA18990.hp2 NA18990.hp2	intron_variant	MODIFIER	c.84+203T>A c.84+203T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600461
chrX:49600508	A A	G G	23	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 others(20): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0029 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0072 a0002c0002t0009g0002 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128	48	HG00408.hp1 HG00423.hp2 HG00597.hp1 others(45): Show HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00621.hp1 HG01071.hp1 HG01123.hp1 HG01123.hp2 HG01515.hp1 HG01517.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02135.hp2 HG02683.hp2 HG02735.hp1 HG03017.hp1 HG03669.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18953.hp1 NA18956.hp1 NA18961.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp2 NA19056.hp1 NA19058.hp1 NA19067.hp1 NA19068.hp1 NA19077.hp2 NA19081.hp2 NA20905.hp1	intron_variant	MODIFIER	c.85-216A>G c.85-216A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600508
chrX:49600516	AT AT	A A	1	a0012c0007t0001g0120 a0012c0007t0001g0120	1	HG01517.hp2 HG01517.hp2	intron_variant	MODIFIER	c.85-207delT c.85-207delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600516
chrX:49600522	C C	T T	76	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 others(73): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0004c0004t0001g0019 a0006c0006t0011g0063 a0007c0012t0001g0081 a0008c0010t0001g0080	138	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(135): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02055.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp1 HG03516.hp2 HG03540.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19030.hp1 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA19240.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.85-202C>T c.85-202C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600522
chrX:49600534	G G	GT GT	1	a0012c0007t0001g0120 a0012c0007t0001g0120	1	HG01517.hp2 HG01517.hp2	intron_variant	MODIFIER	c.85-189dupT c.85-189dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600534
chrX:49600534	G G	T T	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.85-190G>T c.85-190G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600534
chrX:49600537	C C	T T	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.85-187C>T c.85-187C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600537
chrX:49600552	A A	G G	17	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 others(14): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0004c0004t0001g0019 a0007c0012t0001g0081 a0008c0010t0001g0080	32	HG00738.hp1 HG00741.hp1 HG01081.hp1 others(29): Show HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.85-172A>G c.85-172A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600552
chrX:49600556	AC AC	A A	1	a0012c0007t0001g0120 a0012c0007t0001g0120	1	HG01517.hp2 HG01517.hp2	intron_variant	MODIFIER	c.85-166delC c.85-166delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600556
chrX:49600583	TG TG	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.85-138delG c.85-138delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600583
chrX:49600628	G G	T T	14	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 others(11): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0079 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0004c0004t0001g0019 a0007c0012t0001g0081 a0008c0010t0001g0080	28	HG00738.hp1 HG00741.hp1 HG01081.hp1 others(25): Show HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02280.hp1 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03195.hp1 HG03209.hp1 HG03453.hp2 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.85-96G>T c.85-96G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600628
chrX:49600631	C C	A A	13	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 others(10): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0079 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0004c0004t0001g0019 a0007c0012t0001g0081 a0008c0010t0001g0080	27	HG00738.hp1 HG00741.hp1 HG01081.hp1 others(24): Show HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02280.hp1 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03195.hp1 HG03209.hp1 HG03453.hp2 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.85-93C>A c.85-93C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600631
chrX:49600695	T T	C C	22	a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 others(19): Show a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0091 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0004c0004t0001g0019 a0005c0005t0001g0089 a0007c0012t0001g0081 a0008c0010t0001g0080	43	HG00738.hp1 HG00741.hp1 HG01069.hp2 others(40): Show HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01081.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01496.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG02004.hp2 HG02055.hp1 HG02109.hp2 HG02148.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.85-29T>C c.85-29T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4		chrX	49600695
chrX:49600703	A A	AC AC	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.85-20dupC c.85-20dupC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600703
chrX:49600717	TC TC	T T	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	splice_region_variant&intron_variant	LOW	c.85-3delC c.85-3delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	49600717
chrX:49600892	T T	TTC TTC	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+48_205+49insTC c.205+48_205+49insTC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49600892
chrX:49600895	T T	G G	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+51T>G c.205+51T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49600895
chrX:49600896	C C	T T	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+52C>T c.205+52C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49600896
chrX:49600896	CGT CGT	C C	65	a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 others(62): Show a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0126 a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	120	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(117): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+66_205+67delTG c.205+66_205+67delTG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49600896
chrX:49600901	G G	GT GT	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+58dupT c.205+58dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49600901
chrX:49600904	T T	TG TG	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	NA19059.hp2 NA19059.hp2	intron_variant	MODIFIER	c.205+61dupG c.205+61dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49600904
chrX:49600906	TG TG	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+63delG c.205+63delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49600906
chrX:49600914	C C	CGT CGT	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+85_205+86dupGT c.205+85_205+86dupGT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49600914
chrX:49600914	CGTGT CGTGT	C C	65	a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 others(62): Show a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0126 a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	120	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(117): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+83_205+86delGT others(2): Show c.205+83_205+86delGTGT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49600914
chrX:49600965	A A	G G	1	a0001c0001t0001g0119 a0001c0001t0001g0119	1	HG02109.hp1 HG02109.hp1	intron_variant	MODIFIER	c.205+121A>G c.205+121A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49600965
chrX:49600997	GA GA	G G	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+157delA c.205+157delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49600997
chrX:49601008	A A	AG AG	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+166dupG c.205+166dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601008
chrX:49601021	C C	T T	65	a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 others(62): Show a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0091 a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	121	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(118): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+177C>T c.205+177C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601021
chrX:49601023	C C	CG CG	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+179_205+180ins others(1): Show c.205+179_205+180insG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601023
chrX:49601048	C C	G G	1	a0001c0001t0008g0135 a0001c0001t0008g0135	1	HG03453.hp2 HG03453.hp2	intron_variant	MODIFIER	c.205+204C>G c.205+204C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601048
chrX:49601051	T T	TG TG	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+209dupG c.205+209dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601051
chrX:49601053	G G	A A	65	a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 others(62): Show a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0091 a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063 a0008c0010t0001g0080	120	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(117): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19030.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+209G>A c.205+209G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601053
chrX:49601060	A A	T T	65	a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 others(62): Show a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0091 a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063 a0008c0010t0001g0080	120	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(117): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19030.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+216A>T c.205+216A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601060
chrX:49601131	T T	TTTGAATT others(7): Show TTTGAATTTATTTTA	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+287_205+288ins others(14): Show c.205+287_205+288insTTGAATTTATTTTA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601131
chrX:49601152	C C	T T	63	a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 others(60): Show a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0091 a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	118	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(115): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+308C>T c.205+308C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601152
chrX:49601166	TC TC	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+324delC c.205+324delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601166
chrX:49601177	A A	G G	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+333A>G c.205+333A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601177
chrX:49601186	T T	G G	64	a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 others(61): Show a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	119	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(116): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02293.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+342T>G c.205+342T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601186
chrX:49601206	C C	G G	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+362C>G c.205+362C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601206
chrX:49601230	G G	A A	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+386G>A c.205+386G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601230
chrX:49601231	CT CT	C C	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+390delT c.205+390delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601231
chrX:49601237	T T	C C	1	a0001c0001t0001g0032 a0001c0001t0001g0032	2	HG01257.hp1 HG01258.hp2 HG01257.hp1 HG01258.hp2	intron_variant	MODIFIER	c.205+393T>C c.205+393T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601237
chrX:49601302	AC AC	A A	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+460delC c.205+460delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601302
chrX:49601321	G G	GC GC	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.205+482dupC c.205+482dupC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601321
chrX:49601332	C C	CT CT	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.205+491dupT c.205+491dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601332
chrX:49601332	CT CT	C C	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+491delT c.205+491delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601332
chrX:49601338	T T	C C	34	a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0003g0003 others(31): Show a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0003c0003t0003g0050	56	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(53): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01952.hp1 HG01978.hp1 HG02129.hp1 HG02148.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp2 NA18952.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp2 NA18965.hp1 NA18981.hp1 NA18985.hp1 NA18989.hp1 NA19003.hp1 NA19004.hp1 NA19010.hp1 NA19059.hp1 NA19064.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+494T>C c.205+494T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601338
chrX:49601358	GT GT	G G	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.205+517delT c.205+517delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601358
chrX:49601472	CG CG	C C	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+630delG c.205+630delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601472
chrX:49601514	CG CG	C C	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+671delG c.205+671delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601514
chrX:49601515	G G	C C	91	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(88): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0061 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0130 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0007g0001 a0001c0001t0007g0007 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0010g0023 a0001c0001t0013g0001 a0001c0001t0017g0006 a0001c0001t0018g0001 a0001c0001t0019g0103 a0001c0001t0020g0004 a0001c0001t0021g0111 a0001c0001t0022g0113 a0001c0001t0025g0059 a0001c0001t0026g0036 a0004c0004t0001g0005 a0004c0004t0001g0019 a0004c0004t0001g0026 a0005c0005t0001g0001 a0005c0005t0001g0089 a0007c0012t0001g0081 a0009c0009t0001g0001 a0012c0007t0001g0120	194	HG00099.hp1 HG00323.hp1 HG00323.hp2 others(191): Show HG00099.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp2 HG01943.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02055.hp1 HG02056.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02698.hp2 HG02717.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG04184.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18944.hp2 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18960.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp2 NA18971.hp2 NA18975.hp1 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp2 NA18981.hp2 NA18982.hp2 NA18983.hp2 NA18988.hp1 NA18990.hp2 NA18998.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19012.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19059.hp2 NA19060.hp2 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19070.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp2 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19085.hp2 NA19087.hp1 NA19089.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA21309.hp1 NA21309.hp2	intron_variant	MODIFIER	c.205+671G>C c.205+671G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601515
chrX:49601579	C C	G G	7	a0001c0001t0001g0006 a0001c0001t0001g0023 a0001c0001t0001g0116 others(4): Show a0001c0001t0001g0006 a0001c0001t0001g0023 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0133 a0001c0001t0010g0023 a0001c0001t0017g0006	14	HG02027.hp2 HG02165.hp1 HG02523.hp1 others(11): Show HG02027.hp2 HG02165.hp1 HG02523.hp1 NA18940.hp1 NA18948.hp2 NA18970.hp2 NA18975.hp2 NA18978.hp1 NA19005.hp2 NA19009.hp2 NA19065.hp1 NA19074.hp1 NA19081.hp1 NA19087.hp1	intron_variant	MODIFIER	c.205+735C>G c.205+735C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601579
chrX:49601581	G G	C C	1	a0001c0001t0001g0116 a0001c0001t0001g0116	1	NA19087.hp1 NA19087.hp1	intron_variant	MODIFIER	c.205+737G>C c.205+737G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601581
chrX:49601583	TA TA	T T	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.205+743delA c.205+743delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601583
chrX:49601609	A A	G G	4	a0001c0001t0001g0019 a0001c0001t0001g0126 a0001c0001t0001g0136 others(1): Show a0001c0001t0001g0019 a0001c0001t0001g0126 a0001c0001t0001g0136 a0004c0004t0001g0019	5	HG01891.hp1 HG03041.hp2 HG03209.hp1 others(2): Show HG01891.hp1 HG03041.hp2 HG03209.hp1 HG03486.hp2 HG03540.hp2	intron_variant	MODIFIER	c.205+765A>G c.205+765A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601609
chrX:49601652	T T	C C	5	a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 others(2): Show a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0057 a0002c0002t0003g0058	5	NA18981.hp1 NA18985.hp1 NA19059.hp1 others(2): Show NA18981.hp1 NA18985.hp1 NA19059.hp1 NA19083.hp1 NA19087.hp2	intron_variant	MODIFIER	c.205+808T>C c.205+808T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601652
chrX:49601687	A A	G G	1	a0003c0003t0003g0050 a0003c0003t0003g0050	1	HG01099.hp1 HG01099.hp1	intron_variant	MODIFIER	c.205+843A>G c.205+843A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601687
chrX:49601709	T T	A A	1	a0001c0001t0001g0094 a0001c0001t0001g0094	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.205+865T>A c.205+865T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601709
chrX:49601716	G G	C C	1	a0002c0002t0002g0064 a0002c0002t0002g0064	1	NA18979.hp1 NA18979.hp1	intron_variant	MODIFIER	c.205+872G>C c.205+872G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601716
chrX:49601762	A A	C C	3	a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078	4	HG02109.hp2 HG03139.hp1 HG03195.hp2 others(1): Show HG02109.hp2 HG03139.hp1 HG03195.hp2 HG03471.hp1	intron_variant	MODIFIER	c.205+918A>C c.205+918A>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601762
chrX:49601770	A A	AT AT	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+929dupT c.205+929dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601770
chrX:49601777	C C	G G	33	a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0003g0003 others(30): Show a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0003c0003t0003g0050	55	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(52): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00609.hp1 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01952.hp1 HG01978.hp1 HG02129.hp1 HG02148.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03225.hp1 HG03490.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18612.hp1 NA18941.hp2 NA18952.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp2 NA18965.hp1 NA18981.hp1 NA18985.hp1 NA18989.hp1 NA19003.hp1 NA19004.hp1 NA19010.hp1 NA19059.hp1 NA19064.hp1 NA19074.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+933C>G c.205+933C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601777
chrX:49601799	C C	G G	1	a0002c0002t0003g0072 a0002c0002t0003g0072	1	NA18995.hp1 NA18995.hp1	intron_variant	MODIFIER	c.205+955C>G c.205+955C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601799
chrX:49601801	A A	G G	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+957A>G c.205+957A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601801
chrX:49601829	AT AT	A A	58	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(55): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	107	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+989delT c.205+989delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601829
chrX:49601829	ATT ATT	A A	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.205+988_205+989del others(2): Show c.205+988_205+989delTT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49601829
chrX:49601904	A A	G G	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.205+1060A>G c.205+1060A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601904
chrX:49601905	C C	T T	1	a0002c0002t0002g0071 a0002c0002t0002g0071	1	HG03834.hp1 HG03834.hp1	intron_variant	MODIFIER	c.205+1061C>T c.205+1061C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601905
chrX:49601960	G G	A A	1	a0002c0002t0002g0065 a0002c0002t0002g0065	1	HG01123.hp2 HG01123.hp2	intron_variant	MODIFIER	c.205+1116G>A c.205+1116G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49601960
chrX:49602023	G G	T T	1	a0002c0002t0002g0075 a0002c0002t0002g0075	1	HG00597.hp1 HG00597.hp1	intron_variant	MODIFIER	c.205+1179G>T c.205+1179G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602023
chrX:49602142	C C	T T	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+1298C>T c.205+1298C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602142
chrX:49602162	G G	A A	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+1318G>A c.205+1318G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602162
chrX:49602172	T T	TAAAC TAAAC	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.205+1329_205+1330i others(6): Show c.205+1329_205+1330insAACA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602172
chrX:49602189	T T	A A	1	a0001c0001t0001g0095 a0001c0001t0001g0095	1	HG02602.hp1 HG02602.hp1	intron_variant	MODIFIER	c.205+1345T>A c.205+1345T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602189
chrX:49602216	GA GA	G G	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.205+1376delA c.205+1376delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602216
chrX:49602232	A A	C C	1	a0001c0001t0001g0117 a0001c0001t0001g0117	1	NA19074.hp1 NA19074.hp1	intron_variant	MODIFIER	c.205+1388A>C c.205+1388A>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602232
chrX:49602246	GT GT	G G	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.205+1403delT c.205+1403delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602246
chrX:49602296	A A	G G	1	a0001c0001t0001g0115 a0001c0001t0001g0115	1	HG02683.hp1 HG02683.hp1	intron_variant	MODIFIER	c.206-1372A>G c.206-1372A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602296
chrX:49602335	G G	T T	60	a0001c0001t0001g0114 a0001c0001t0006g0020 a0002c0002t0002g0002 others(57): Show a0001c0001t0001g0114 a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-1333G>T c.206-1333G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602335
chrX:49602341	C C	G G	2	a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0008g0134 a0001c0001t0008g0135	2	HG02055.hp1 HG03453.hp2 HG02055.hp1 HG03453.hp2	intron_variant	MODIFIER	c.206-1327C>G c.206-1327C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602341
chrX:49602367	G G	T T	1	a0001c0001t0022g0113 a0001c0001t0022g0113	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.206-1301G>T c.206-1301G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602367
chrX:49602367	GT GT	G G	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-1299delT c.206-1299delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602367
chrX:49602372	G G	A A	31	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0018 others(28): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0084 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0119 a0001c0001t0001g0122 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0001c0001t0022g0113 a0003c0003t0024g0139 a0004c0004t0001g0005 a0004c0004t0001g0019 a0005c0005t0001g0089 a0007c0012t0001g0081 a0008c0010t0001g0080	58	HG00738.hp1 HG00741.hp1 HG01081.hp1 others(55): Show HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02717.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1 NA19240.hp2	intron_variant	MODIFIER	c.206-1296G>A c.206-1296G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602372
chrX:49602403	C C	A A	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-1265C>A c.206-1265C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602403
chrX:49602421	T T	A A	60	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(57): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-1247T>A c.206-1247T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602421
chrX:49602426	G G	A A	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-1242G>A c.206-1242G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602426
chrX:49602488	CA CA	C C	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-1178delA c.206-1178delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602488
chrX:49602497	G G	A A	19	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 others(16): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0126 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0003c0003t0024g0139 a0004c0004t0001g0019 a0007c0012t0001g0081 a0008c0010t0001g0080	34	HG00738.hp1 HG00741.hp1 HG01081.hp1 others(31): Show HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.206-1171G>A c.206-1171G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602497
chrX:49602528	T T	TC TC	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-1137dupC c.206-1137dupC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602528
chrX:49602560	T T	TCA TCA	2	a0001c0001t0001g0084 a0001c0001t0001g0096 a0001c0001t0001g0084 a0001c0001t0001g0096	2	HG01884.hp1 HG03516.hp1 HG01884.hp1 HG03516.hp1	intron_variant	MODIFIER	c.206-1087_206-1086d others(4): Show c.206-1087_206-1086dupCA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602560
chrX:49602572	A A	ACT ACT	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-1095_206-1094i others(4): Show c.206-1095_206-1094insTC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602572
chrX:49602611	C C	G G	2	a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0008g0134 a0001c0001t0008g0135	2	HG02055.hp1 HG03453.hp2 HG02055.hp1 HG03453.hp2	intron_variant	MODIFIER	c.206-1057C>G c.206-1057C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602611
chrX:49602620	T T	C C	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-1048T>C c.206-1048T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602620
chrX:49602634	A A	AG AG	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-1032dupG c.206-1032dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602634
chrX:49602637	T T	G G	2	a0002c0002t0002g0127 a0002c0002t0003g0045 a0002c0002t0002g0127 a0002c0002t0003g0045	2	HG03688.hp1 NA19068.hp1 HG03688.hp1 NA19068.hp1	intron_variant	MODIFIER	c.206-1031T>G c.206-1031T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602637
chrX:49602650	T T	C C	2	a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0008g0134 a0001c0001t0008g0135	2	HG02055.hp1 HG03453.hp2 HG02055.hp1 HG03453.hp2	intron_variant	MODIFIER	c.206-1018T>C c.206-1018T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602650
chrX:49602665	AG AG	A A	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-1000delG c.206-1000delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602665
chrX:49602674	T T	A A	1	a0002c0002t0002g0129 a0002c0002t0002g0129	1	HG03927.hp1 HG03927.hp1	intron_variant	MODIFIER	c.206-994T>A c.206-994T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602674
chrX:49602693	A A	G G	60	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(57): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-975A>G c.206-975A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602693
chrX:49602712	T T	C C	1	a0001c0001t0001g0097 a0001c0001t0001g0097	1	HG01934.hp2 HG01934.hp2	intron_variant	MODIFIER	c.206-956T>C c.206-956T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602712
chrX:49602720	CA CA	C C	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.206-945delA c.206-945delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602720
chrX:49602727	C C	A A	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-941C>A c.206-941C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602727
chrX:49602739	A A	T T	1	a0001c0001t0001g0130 a0001c0001t0001g0130	1	NA18998.hp1 NA18998.hp1	intron_variant	MODIFIER	c.206-929A>T c.206-929A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602739
chrX:49602739	AT AT	A A	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-926delT c.206-926delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602739
chrX:49602758	G G	A A	1	a0001c0001t0001g0100 a0001c0001t0001g0100	1	NA18963.hp1 NA18963.hp1	intron_variant	MODIFIER	c.206-910G>A c.206-910G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602758
chrX:49602812	CT CT	C C	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.206-850delT c.206-850delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602812
chrX:49602820	CT CT	C C	1	a0001c0001t0001g0098 a0001c0001t0001g0098	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.206-838delT c.206-838delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602820
chrX:49602864	G G	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	3	HG02622.hp2 HG02965.hp1 NA19043.hp1 HG02622.hp2 HG02965.hp1 NA19043.hp1	intron_variant	MODIFIER	c.206-804G>T c.206-804G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602864
chrX:49602904	A A	C C	4	a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 others(1): Show a0001c0001t0001g0010 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0091	10	HG01069.hp2 HG01071.hp2 HG01257.hp1 others(7): Show HG01069.hp2 HG01071.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01496.hp1 HG01928.hp2 HG02004.hp2 HG02148.hp2 HG02293.hp1	intron_variant	MODIFIER	c.206-764A>C c.206-764A>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602904
chrX:49602941	TC TC	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-724delC c.206-724delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602941
chrX:49602945	G G	GT GT	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.206-722dupT c.206-722dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602945
chrX:49602947	G G	A A	1	a0002c0002t0015g0137 a0002c0002t0015g0137	1	HG03490.hp1 HG03490.hp1	intron_variant	MODIFIER	c.206-721G>A c.206-721G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602947
chrX:49602952	TG TG	T T	1	a0002c0002t0003g0057 a0002c0002t0003g0057	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.206-713delG c.206-713delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49602952
chrX:49602979	T T	G G	4	a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 others(1): Show a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0020g0004	13	HG00738.hp1 HG00741.hp1 HG01884.hp2 others(10): Show HG00738.hp1 HG00741.hp1 HG01884.hp2 HG02280.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03130.hp1 HG03195.hp1 HG06807.hp1 NA18906.hp2	intron_variant	MODIFIER	c.206-689T>G c.206-689T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49602979
chrX:49603055	GC GC	G G	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-610delC c.206-610delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49603055
chrX:49603111	C C	G G	55	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(52): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	103	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(100): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-557C>G c.206-557C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603111
chrX:49603112	A A	G G	1	a0002c0002t0003g0028 a0002c0002t0003g0028	2	HG01168.hp1 HG01169.hp2 HG01168.hp1 HG01169.hp2	intron_variant	MODIFIER	c.206-556A>G c.206-556A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603112
chrX:49603225	G G	GT GT	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-441dupT c.206-441dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49603225
chrX:49603360	G G	A A	1	a0001c0001t0001g0021 a0001c0001t0001g0021	3	NA19030.hp2 NA20129.hp1 NA20752.hp2 NA19030.hp2 NA20129.hp1 NA20752.hp2	intron_variant	MODIFIER	c.206-308G>A c.206-308G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603360
chrX:49603360	G G	C C	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-308G>C c.206-308G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603360
chrX:49603386	C C	T T	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-282C>T c.206-282C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603386
chrX:49603411	AAG AAG	A A	1	a0001c0001t0001g0095 a0001c0001t0001g0095	1	HG02602.hp1 HG02602.hp1	intron_variant	MODIFIER	c.206-251_206-250del others(2): Show c.206-251_206-250delGA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49603411
chrX:49603414	A A	G G	60	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(57): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-254A>G c.206-254A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603414
chrX:49603415	G G	A A	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-253G>A c.206-253G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603415
chrX:49603467	A A	G G	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.206-201A>G c.206-201A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603467
chrX:49603475	A A	T T	18	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 others(15): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0126 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0020g0004 a0004c0004t0001g0019 a0007c0012t0001g0081 a0008c0010t0001g0080	33	HG00738.hp1 HG00741.hp1 HG01081.hp1 others(30): Show HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01884.hp2 HG01891.hp1 HG02055.hp1 HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.206-193A>T c.206-193A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603475
chrX:49603511	C C	A A	16	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 others(13): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0126 a0001c0001t0001g0136 a0001c0001t0004g0004 a0001c0001t0004g0031 a0001c0001t0004g0082 a0001c0001t0020g0004 a0004c0004t0001g0019 a0007c0012t0001g0081 a0008c0010t0001g0080	31	HG00738.hp1 HG00741.hp1 HG01081.hp1 others(28): Show HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01884.hp2 HG01891.hp1 HG02109.hp2 HG02280.hp1 HG02280.hp2 HG02622.hp2 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03471.hp1 HG03486.hp2 HG03540.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1	intron_variant	MODIFIER	c.206-157C>A c.206-157C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603511
chrX:49603511	C C	T T	2	a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0008g0134 a0001c0001t0008g0135	2	HG02055.hp1 HG03453.hp2 HG02055.hp1 HG03453.hp2	intron_variant	MODIFIER	c.206-157C>T c.206-157C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603511
chrX:49603597	C C	A A	1	a0001c0001t0001g0101 a0001c0001t0001g0101	1	NA19012.hp1 NA19012.hp1	intron_variant	MODIFIER	c.206-71C>A c.206-71C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4		chrX	49603597
chrX:49603639	T T	TA TA	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.206-26dupA c.206-26dupA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	49603639
chrX:49603855	G G	C C	60	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(57): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.331+62G>C c.331+62G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49603855
chrX:49603855	G G	T T	2	a0001c0001t0001g0112 a0001c0001t0001g0125 a0001c0001t0001g0112 a0001c0001t0001g0125	2	HG02809.hp1 NA19082.hp1 HG02809.hp1 NA19082.hp1	intron_variant	MODIFIER	c.331+62G>T c.331+62G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49603855
chrX:49603857	C C	G G	2	a0001c0001t0001g0112 a0001c0001t0001g0125 a0001c0001t0001g0112 a0001c0001t0001g0125	2	HG02809.hp1 NA19082.hp1 HG02809.hp1 NA19082.hp1	intron_variant	MODIFIER	c.331+64C>G c.331+64C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49603857
chrX:49603987	G G	C C	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.331+194G>C c.331+194G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49603987
chrX:49603998	G G	A A	5	a0001c0001t0001g0006 a0001c0001t0001g0116 a0001c0001t0001g0117 others(2): Show a0001c0001t0001g0006 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0133 a0001c0001t0017g0006	11	HG02165.hp1 NA18940.hp1 NA18948.hp2 others(8): Show HG02165.hp1 NA18940.hp1 NA18948.hp2 NA18970.hp2 NA18975.hp2 NA18978.hp1 NA19005.hp2 NA19065.hp1 NA19074.hp1 NA19081.hp1 NA19087.hp1	intron_variant	MODIFIER	c.331+205G>A c.331+205G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49603998
chrX:49604009	T T	C C	1	a0001c0001t0001g0099 a0001c0001t0001g0099	1	HG02818.hp2 HG02818.hp2	intron_variant	MODIFIER	c.331+216T>C c.331+216T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604009
chrX:49604025	G G	T T	1	a0003c0003t0002g0128 a0003c0003t0002g0128	1	HG03927.hp2 HG03927.hp2	intron_variant	MODIFIER	c.331+232G>T c.331+232G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604025
chrX:49604044	G G	C C	1	a0007c0012t0001g0081 a0007c0012t0001g0081	1	HG02280.hp1 HG02280.hp1	intron_variant	MODIFIER	c.331+251G>C c.331+251G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604044
chrX:49604123	G G	T T	1	a0002c0002t0002g0064 a0002c0002t0002g0064	1	NA18979.hp1 NA18979.hp1	intron_variant	MODIFIER	c.331+330G>T c.331+330G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604123
chrX:49604137	GC GC	G G	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.331+346delC c.331+346delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49604137
chrX:49604160	A A	G G	3	a0002c0002t0002g0009 a0002c0002t0002g0069 a0003c0003t0002g0070 a0002c0002t0002g0009 a0002c0002t0002g0069 a0003c0003t0002g0070	7	HG01071.hp1 HG01123.hp1 HG01515.hp1 others(4): Show HG01071.hp1 HG01123.hp1 HG01515.hp1 HG01517.hp1 HG01978.hp2 HG01993.hp1 NA18969.hp2	intron_variant	MODIFIER	c.331+367A>G c.331+367A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604160
chrX:49604162	A A	AT AT	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.331+374dupT c.331+374dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49604162
chrX:49604229	A A	T T	1	a0001c0001t0021g0111 a0001c0001t0021g0111	1	HG02004.hp1 HG02004.hp1	intron_variant	MODIFIER	c.331+436A>T c.331+436A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604229
chrX:49604261	A A	C C	1	a0001c0001t0001g0110 a0001c0001t0001g0110	1	HG00099.hp1 HG00099.hp1	intron_variant	MODIFIER	c.331+468A>C c.331+468A>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604261
chrX:49604271	A A	G G	1	a0001c0001t0001g0109 a0001c0001t0001g0109	1	NA18957.hp1 NA18957.hp1	intron_variant	MODIFIER	c.331+478A>G c.331+478A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604271
chrX:49604280	C C	G G	1	a0002c0002t0002g0068 a0002c0002t0002g0068	1	NA18961.hp1 NA18961.hp1	intron_variant	MODIFIER	c.331+487C>G c.331+487C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604280
chrX:49604295	G G	T T	1	a0001c0001t0001g0108 a0001c0001t0001g0108	1	HG02630.hp2 HG02630.hp2	intron_variant	MODIFIER	c.331+502G>T c.331+502G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604295
chrX:49604317	A A	T T	2	a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0008g0134 a0001c0001t0008g0135	2	HG02055.hp1 HG03453.hp2 HG02055.hp1 HG03453.hp2	intron_variant	MODIFIER	c.331+524A>T c.331+524A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604317
chrX:49604363	C C	G G	2	a0001c0001t0001g0022 a0001c0001t0001g0114 a0001c0001t0001g0022 a0001c0001t0001g0114	4	HG02080.hp1 NA18954.hp2 NA18968.hp1 others(1): Show HG02080.hp1 NA18954.hp2 NA18968.hp1 NA18981.hp2	intron_variant	MODIFIER	c.331+570C>G c.331+570C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604363
chrX:49604394	A A	G G	1	a0001c0001t0001g0086 a0001c0001t0001g0086	1	NA18949.hp1 NA18949.hp1	intron_variant	MODIFIER	c.331+601A>G c.331+601A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604394
chrX:49604442	G G	T T	1	a0002c0002t0002g0067 a0002c0002t0002g0067	1	HG03017.hp1 HG03017.hp1	intron_variant	MODIFIER	c.331+649G>T c.331+649G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604442
chrX:49604463	C C	CA CA	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.331+671dupA c.331+671dupA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49604463
chrX:49604512	T T	C C	1	a0002c0002t0003g0046 a0002c0002t0003g0046	1	HG01106.hp1 HG01106.hp1	intron_variant	MODIFIER	c.331+719T>C c.331+719T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604512
chrX:49604517	G G	C C	1	a0001c0001t0001g0102 a0001c0001t0001g0102	1	HG00323.hp1 HG00323.hp1	intron_variant	MODIFIER	c.331+724G>C c.331+724G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604517
chrX:49604522	GA GA	G G	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.331+733delA c.331+733delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49604522
chrX:49604570	G G	T T	3	a0001c0001t0001g0019 a0001c0001t0001g0126 a0004c0004t0001g0019 a0001c0001t0001g0019 a0001c0001t0001g0126 a0004c0004t0001g0019	4	HG03041.hp2 HG03209.hp1 HG03486.hp2 others(1): Show HG03041.hp2 HG03209.hp1 HG03486.hp2 HG03540.hp2	intron_variant	MODIFIER	c.331+777G>T c.331+777G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604570
chrX:49604593	T T	G G	2	a0001c0001t0008g0134 a0001c0001t0008g0135 a0001c0001t0008g0134 a0001c0001t0008g0135	2	HG02055.hp1 HG03453.hp2 HG02055.hp1 HG03453.hp2	intron_variant	MODIFIER	c.331+800T>G c.331+800T>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604593
chrX:49604647	CA CA	C C	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.331+857delA c.331+857delA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49604647
chrX:49604672	C C	T T	1	a0001c0001t0001g0107 a0001c0001t0001g0107	1	NA19085.hp2 NA19085.hp2	intron_variant	MODIFIER	c.331+879C>T c.331+879C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604672
chrX:49604725	A A	C C	1	a0001c0001t0001g0095 a0001c0001t0001g0095	1	HG02602.hp1 HG02602.hp1	intron_variant	MODIFIER	c.331+932A>C c.331+932A>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604725
chrX:49604782	G G	T T	20	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0013 others(17): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0013 a0002c0002t0002g0029 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0009g0002 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0128	43	HG00408.hp1 HG00423.hp2 HG00597.hp1 others(40): Show HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00621.hp1 HG01123.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02135.hp2 HG02683.hp2 HG02735.hp1 HG03017.hp1 HG03491.hp1 HG03492.hp1 HG03669.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04228.hp1 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18953.hp1 NA18956.hp1 NA18961.hp1 NA18966.hp1 NA18977.hp1 NA18979.hp1 NA18984.hp1 NA18994.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp2 NA19056.hp1 NA19058.hp1 NA19067.hp1 NA19068.hp1 NA19077.hp2 NA19081.hp2 NA20905.hp1	intron_variant	MODIFIER	c.331+989G>T c.331+989G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604782
chrX:49604794	A A	AT AT	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.331+1003dupT c.331+1003dupT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49604794
chrX:49604853	G G	T T	1	a0001c0001t0001g0121 a0001c0001t0001g0121	1	HG01346.hp1 HG01346.hp1	intron_variant	MODIFIER	c.331+1060G>T c.331+1060G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604853
chrX:49604898	C C	T T	1	a0002c0002t0003g0049 a0002c0002t0003g0049	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.332-1095C>T c.332-1095C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604898
chrX:49604940	TG TG	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.332-1051delG c.332-1051delG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49604940
chrX:49604958	C C	G G	1	a0001c0001t0001g0106 a0001c0001t0001g0106	1	HG02074.hp1 HG02074.hp1	intron_variant	MODIFIER	c.332-1035C>G c.332-1035C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49604958
chrX:49605005	G G	A A	2	a0001c0001t0001g0018 a0001c0001t0001g0079 a0001c0001t0001g0018 a0001c0001t0001g0079	4	HG01081.hp1 HG02976.hp2 HG06807.hp2 others(1): Show HG01081.hp1 HG02976.hp2 HG06807.hp2 NA19240.hp1	intron_variant	MODIFIER	c.332-988G>A c.332-988G>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605005
chrX:49605018	G G	T T	1	a0002c0002t0002g0066 a0002c0002t0002g0066	1	NA19056.hp1 NA19056.hp1	intron_variant	MODIFIER	c.332-975G>T c.332-975G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605018
chrX:49605033	C C	A A	1	a0001c0001t0019g0103 a0001c0001t0019g0103	1	HG03704.hp2 HG03704.hp2	intron_variant	MODIFIER	c.332-960C>A c.332-960C>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605033
chrX:49605069	TC TC	T T	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.332-920delC c.332-920delC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605069
chrX:49605108	A A	G G	60	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(57): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.332-885A>G c.332-885A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605108
chrX:49605134	G G	T T	1	a0001c0001t0001g0025 a0001c0001t0001g0025	3	HG02622.hp2 HG02965.hp1 NA19043.hp1 HG02622.hp2 HG02965.hp1 NA19043.hp1	intron_variant	MODIFIER	c.332-859G>T c.332-859G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605134
chrX:49605139	AT AT	A A	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.332-853delT c.332-853delT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605139
chrX:49605169	G G	T T	1	a0003c0003t0002g0070 a0003c0003t0002g0070	1	NA18969.hp2 NA18969.hp2	intron_variant	MODIFIER	c.332-824G>T c.332-824G>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605169
chrX:49605217	G G	C C	60	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(57): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.332-776G>C c.332-776G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605217
chrX:49605249	A A	G G	1	a0006c0006t0011g0063 a0006c0006t0011g0063	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.332-744A>G c.332-744A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605249
chrX:49605362	G G	C C	1	a0001c0001t0001g0126 a0001c0001t0001g0126	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.332-631G>C c.332-631G>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605362
chrX:49605381	A A	G G	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.332-612A>G c.332-612A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605381
chrX:49605382	T T	C C	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.332-611T>C c.332-611T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605382
chrX:49605385	C C	T T	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.332-608C>T c.332-608C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605385
chrX:49605434	C C	G G	1	a0002c0002t0002g0069 a0002c0002t0002g0069	1	HG01978.hp2 HG01978.hp2	intron_variant	MODIFIER	c.332-559C>G c.332-559C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605434
chrX:49605453	T T	A A	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.332-540T>A c.332-540T>A	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605453
chrX:49605497	A A	T T	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.332-496A>T c.332-496A>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605497
chrX:49605524	A A	G G	1	a0002c0002t0003g0048 a0002c0002t0003g0048	1	HG03669.hp1 HG03669.hp1	intron_variant	MODIFIER	c.332-469A>G c.332-469A>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605524
chrX:49605600	C C	G G	1	a0001c0001t0025g0059 a0001c0001t0025g0059	1	HG02698.hp2 HG02698.hp2	intron_variant	MODIFIER	c.332-393C>G c.332-393C>G	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605600
chrX:49605681	C C	T T	1	a0003c0003t0024g0139 a0003c0003t0024g0139	1	HG02622.hp1 HG02622.hp1	intron_variant	MODIFIER	c.332-312C>T c.332-312C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605681
chrX:49605694	A A	AG AG	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.332-297dupG c.332-297dupG	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605694
chrX:49605779	C C	T T	1	a0002c0002t0003g0038 a0002c0002t0003g0038	1	HG00735.hp2 HG00735.hp2	intron_variant	MODIFIER	c.332-214C>T c.332-214C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605779
chrX:49605796	C C	T T	59	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(56): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0006c0006t0011g0063	108	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.332-197C>T c.332-197C>T	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605796
chrX:49605814	T T	C C	60	a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 others(57): Show a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0013 a0002c0002t0002g0015 a0002c0002t0002g0029 a0002c0002t0002g0041 a0002c0002t0002g0060 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0066 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0069 a0002c0002t0002g0071 a0002c0002t0002g0073 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0127 a0002c0002t0002g0129 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0016 a0002c0002t0003g0017 a0002c0002t0003g0027 a0002c0002t0003g0028 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0047 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0051 a0002c0002t0003g0052 a0002c0002t0003g0053 a0002c0002t0003g0055 a0002c0002t0003g0056 a0002c0002t0003g0057 a0002c0002t0003g0058 a0002c0002t0003g0072 a0002c0002t0003g0132 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0009g0002 a0002c0002t0014g0027 a0002c0002t0015g0137 a0002c0002t0016g0054 a0002c0002t0023g0002 a0003c0003t0002g0002 a0003c0003t0002g0070 a0003c0003t0002g0128 a0003c0003t0003g0050 a0003c0003t0024g0139 a0006c0006t0011g0063	109	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(106): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00408.hp1 HG00423.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01071.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01346.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG03017.hp1 HG03225.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18950.hp1 NA18952.hp1 NA18953.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp2 NA18977.hp1 NA18979.hp1 NA18981.hp1 NA18984.hp1 NA18985.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp2 NA19083.hp1 NA19086.hp1 NA19087.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.332-179T>C c.332-179T>C	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4		chrX	49605814
chrX:49605906	T T	TA TA	1	a0010c0011t0012g0062 a0010c0011t0012g0062	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.332-83dupA c.332-83dupA	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605906
chrX:49605908	A A	AAAT AAAT	73	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(70): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0076 a0001c0001t0001g0084 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0126 a0001c0001t0001g0130 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0007g0001 a0001c0001t0010g0023 a0001c0001t0013g0001 a0001c0001t0017g0006 a0001c0001t0018g0001 a0001c0001t0019g0103 a0001c0001t0025g0059 a0002c0002t0002g0015 a0002c0002t0002g0067 a0002c0002t0003g0003 a0002c0002t0003g0012 a0002c0002t0003g0017 a0002c0002t0003g0037 a0002c0002t0003g0038 a0002c0002t0003g0039 a0002c0002t0003g0045 a0002c0002t0003g0046 a0002c0002t0003g0048 a0002c0002t0003g0049 a0002c0002t0003g0053 a0002c0002t0003g0072 a0002c0002t0005g0003 a0002c0002t0005g0138 a0002c0002t0015g0137 a0003c0003t0003g0050 a0003c0003t0024g0139 a0004c0004t0001g0005 a0004c0004t0001g0026 a0005c0005t0001g0001 a0007c0012t0001g0081 a0008c0010t0001g0080 a0009c0009t0001g0001 a0011c0008t0001g0118 a0012c0007t0001g0120	164	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(161): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00423.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00639.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp2 HG01074.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp1 HG01928.hp2 HG01934.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02148.hp1 HG02165.hp1 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02698.hp2 HG02809.hp2 HG02818.hp1 HG02896.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03195.hp2 HG03225.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03942.hp1 HG04184.hp1 HG04199.hp1 HG04204.hp2 NA18747.hp1 NA18906.hp1 NA18940.hp1 NA18941.hp2 NA18944.hp2 NA18948.hp2 NA18949.hp2 NA18950.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp1 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18967.hp2 NA18968.hp1 NA18969.hp1 NA18970.hp2 NA18971.hp2 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp2 NA18981.hp2 NA18982.hp2 NA18983.hp2 NA18988.hp1 NA18990.hp2 NA18995.hp1 NA18998.hp1 NA19003.hp1 NA19005.hp2 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19059.hp2 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19066.hp2 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19086.hp1 NA19087.hp1 NA19089.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.332-45_332-43dupAA others(1): Show c.332-45_332-43dupAAT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605908
chrX:49605908	A A	AAATAAT AAATAAT	13	a0001c0001t0001g0007 a0001c0001t0001g0035 a0001c0001t0001g0085 others(10): Show a0001c0001t0001g0007 a0001c0001t0001g0035 a0001c0001t0001g0085 a0001c0001t0001g0091 a0001c0001t0001g0099 a0001c0001t0001g0115 a0001c0001t0007g0007 a0002c0002t0003g0040 a0002c0002t0003g0042 a0002c0002t0003g0043 a0002c0002t0003g0044 a0002c0002t0003g0047 a0002c0002t0003g0057	19	HG00544.hp1 HG01978.hp1 HG02132.hp2 others(16): Show HG00544.hp1 HG01978.hp1 HG02132.hp2 HG02148.hp2 HG02615.hp2 HG02683.hp1 HG02818.hp2 HG02976.hp1 HG03831.hp1 HG04115.hp1 NA18522.hp2 NA18981.hp1 NA19007.hp2 NA19059.hp1 NA19065.hp2 NA19083.hp1 NA19087.hp2 NA19091.hp1 NA20300.hp1	intron_variant	MODIFIER	c.332-48_332-43dupAA others(4): Show c.332-48_332-43dupAATAAT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605908
chrX:49605908	A A	AAATAATA others(2): Show AAATAATAAT	12	a0001c0001t0001g0011 a0001c0001t0001g0077 a0001c0001t0001g0083 others(9): Show a0001c0001t0001g0011 a0001c0001t0001g0077 a0001c0001t0001g0083 a0001c0001t0001g0087 a0001c0001t0001g0107 a0001c0001t0001g0108 a0002c0002t0003g0027 a0002c0002t0003g0052 a0002c0002t0003g0058 a0002c0002t0003g0132 a0002c0002t0014g0027 a0005c0005t0001g0089	16	HG01891.hp2 HG01952.hp1 HG02129.hp1 others(13): Show HG01891.hp2 HG01952.hp1 HG02129.hp1 HG02630.hp2 HG03139.hp1 HG04184.hp2 NA18612.hp1 NA18942.hp1 NA18960.hp1 NA18963.hp2 NA18975.hp1 NA18985.hp1 NA18989.hp1 NA19060.hp2 NA19063.hp2 NA19085.hp2	intron_variant	MODIFIER	c.332-51_332-43dupAA others(7): Show c.332-51_332-43dupAATAATAAT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605908
chrX:49605908	A A	AAATAATA others(5): Show AAATAATAATAAT	1	a0002c0002t0003g0051 a0002c0002t0003g0051	1	NA18957.hp2 NA18957.hp2	intron_variant	MODIFIER	c.332-54_332-43dupAA others(10): Show c.332-54_332-43dupAATAATAATAAT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605908
chrX:49605908	AAAT AAAT	A A	6	a0001c0001t0004g0004 a0001c0001t0004g0082 a0001c0001t0020g0004 others(3): Show a0001c0001t0004g0004 a0001c0001t0004g0082 a0001c0001t0020g0004 a0002c0002t0002g0013 a0002c0002t0003g0028 a0006c0006t0011g0063	18	HG00408.hp1 HG01168.hp1 HG01169.hp2 others(15): Show HG00408.hp1 HG01168.hp1 HG01169.hp2 HG01884.hp2 HG02135.hp2 HG02280.hp2 HG02451.hp1 HG02647.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG03130.hp1 HG03195.hp1 HG06807.hp1 NA18906.hp2 NA18977.hp1 NA18994.hp1	intron_variant	MODIFIER	c.332-45_332-43delAA others(1): Show c.332-45_332-43delAAT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605908
chrX:49605908	AAATAAT AAATAAT	A A	1	a0001c0001t0001g0105 a0001c0001t0001g0105	1	HG02165.hp2 HG02165.hp2	intron_variant	MODIFIER	c.332-48_332-43delAA others(4): Show c.332-48_332-43delAATAAT	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605908
chrX:49605948	A A	AATC AATC	1	a0001c0001t0001g0104 a0001c0001t0001g0104	1	NA18968.hp2 NA18968.hp2	intron_variant	MODIFIER	c.332-44_332-42dupAT others(1): Show c.332-44_332-42dupATC	GAGE1	ENSG00000205777.19	transcript	ENST00000381700.11	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	49605948

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JoGo Online Haplotype Explorer GAGE1_chrX_49594020_49613538

JoGo Local Haplotype Explorer (on iGV) GAGE1_chrX_49594020_49613538

Translation Multiple Alignment View

🧬 Gene Summary (with MANE)

AAmino acid(protein) Level Haplotype Info (Total: 12)

CCoding Level Haplotype Info (Total: 12)

TTranscript Level Haplotype Info (Total: 26)

GGenebody Level Haplotype Info (Total: 139)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 12)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 35)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 157)

Haplotype Details by Sample (Haploid Level) (Total: 311)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 15)

CCoding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (Exon) (Total: 52)

GGenebody Level Haplotype Variants (Intron) (Total: 266)

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Annotation (Repeats)

Annotation (SNP Array)