Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 2543 |
| ensemblid | ENSG00000205777.19 |
| hgncid | 4098 |
| symbol | GAGE1 |
| name | G antigen 1 |
| refseq_nuc | NM_001040663.4 |
| refseq_prot | NP_001035753.1 |
| ensembl_nuc | ENST00000381700.11 |
| ensembl_prot | ENSP00000371119.5 |
| mane_status | MANE Select |
| chr | chrX |
| start | 49599020 |
| end | 49608538 |
| strand | + |
| ver | v1.2 |
| region | chrX:49599020-49608538 |
| region5000 | chrX:49594020-49613538 |
| regionname0 | GAGE1_chrX_49599020_49608538 |
| regionname5000 | GAGE1_chrX_49594020_49613538 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/0 | 117 | 194 | 67 | 32 | 76 | 4 | 14 | 57 | GAGE1_chrX_49594020_49613538 | GAGE1 | MSWRG others(112): Show |
chrX | 49594020 | 49613538 |
| a0002 | 0/1 | 116 | 106 | 6 | 23 | 53 | 6 | 17 | 42 | GAGE1_chrX_49594020_49613538 | GAGE1 | MSWRG others(111): Show |
chrX | 49594020 | 49613538 |
| a0003 | 0/0 | 117 | 4 | 2 | 0 | 2 | 0 | 0 | 2 | GAGE1_chrX_49594020_49613538 | GAGE1 | MSWRG others(112): Show |
chrX | 49594020 | 49613538 |
| a0004 | 0/0 | 117 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | MSWRG others(112): Show |
chrX | 49594020 | 49613538 |
| a0005 | 0/0 | 34 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | MSWRG others(29): Show |
chrX | 49594020 | 49613538 |
| a0006 | 0/0 | 117 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | MSWRG others(112): Show |
chrX | 49594020 | 49613538 |
| a0007 | 0/0 | 117 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | MSWRG others(112): Show |
chrX | 49594020 | 49613538 |
| a0008 | 0/0 | 117 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | MSWRG others(112): Show |
chrX | 49594020 | 49613538 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/0 | 351 | 194 | 67 | 32 | 76 | 4 | 14 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(346): Show |
chrX | 49594020 | 49613538 | ||
| a0002c0002 | 0/1 | 348 | 98 | 4 | 22 | 51 | 6 | 14 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(343): Show |
chrX | 49594020 | 49613538 | ||
| a0002c0003 | 0/0 | 348 | 7 | 1 | 1 | 2 | 0 | 3 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(343): Show |
chrX | 49594020 | 49613538 | ||
| a0002c0006 | 0/0 | 348 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(343): Show |
chrX | 49594020 | 49613538 | ||
| a0003c0004 | 0/0 | 351 | 4 | 2 | 0 | 2 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(346): Show |
chrX | 49594020 | 49613538 | ||
| a0004c0005 | 0/0 | 351 | 2 | 1 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(346): Show |
chrX | 49594020 | 49613538 | ||
| a0005c0010 | 0/0 | 351 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(346): Show |
chrX | 49594020 | 49613538 | ||
| a0005c0011 | 0/0 | 351 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(346): Show |
chrX | 49594020 | 49613538 | ||
| a0006c0008 | 0/0 | 351 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(346): Show |
chrX | 49594020 | 49613538 | ||
| a0007c0007 | 0/0 | 351 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(346): Show |
chrX | 49594020 | 49613538 | ||
| a0008c0009 | 0/0 | 351 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | ATGAG others(346): Show |
chrX | 49594020 | 49613538 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/0 | 2993 | 165 | 49 | 29 | 72 | 4 | 10 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0004 | 0/0 | 2993 | 12 | 10 | 2 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0006 | 0/0 | 2993 | 3 | 0 | 0 | 0 | 0 | 3 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0007 | 0/0 | 2993 | 3 | 3 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0008 | 0/0 | 2993 | 2 | 2 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0011 | 0/0 | 2993 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0015 | 0/0 | 2993 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0016 | 0/0 | 2993 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0017 | 0/0 | 2993 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0018 | 0/0 | 2993 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0019 | 0/0 | 2993 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0020 | 0/0 | 2993 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0021 | 0/0 | 2993 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0001c0001t0024 | 0/0 | 2993 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0002c0002t0002 | 0/0 | 2990 | 44 | 3 | 6 | 28 | 2 | 5 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0002t0003 | 0/1 | 2990 | 46 | 1 | 16 | 18 | 4 | 6 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0002t0005 | 0/0 | 2990 | 3 | 0 | 0 | 3 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0002t0009 | 0/0 | 2990 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0002t0012 | 0/0 | 2990 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0002t0013 | 0/0 | 2990 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0002t0014 | 0/0 | 2990 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0002t0022 | 0/0 | 2990 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0003t0002 | 0/0 | 2990 | 5 | 0 | 0 | 2 | 0 | 3 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0003t0003 | 0/0 | 2990 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0003t0023 | 0/0 | 2990 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0002c0006t0010 | 0/0 | 2990 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2985): Show |
chrX | 49594020 | 49613538 |
| a0003c0004t0001 | 0/0 | 2993 | 4 | 2 | 0 | 2 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0004c0005t0001 | 0/0 | 2993 | 2 | 1 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0005c0010t0001 | 0/0 | 2993 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0005c0011t0001 | 0/0 | 2993 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0006c0008t0001 | 0/0 | 2993 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0007c0007t0001 | 0/0 | 2993 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| a0008c0009t0001 | 0/0 | 2993 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | GTCTT others(2988): Show |
chrX | 49594020 | 49613538 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 44 | 3 | 6 | 30 | 1 | 4 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0004 | 1/0 | 13 | 3 | 5 | 3 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0005 | 0/0 | 11 | 10 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0007 | 0/0 | 7 | 3 | 0 | 3 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0008 | 0/0 | 7 | 0 | 0 | 7 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0009 | 0/0 | 6 | 0 | 0 | 5 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0011 | 0/0 | 5 | 0 | 5 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0014 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0018 | 0/0 | 3 | 2 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0019 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0021 | 0/0 | 3 | 2 | 0 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0022 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0023 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0024 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0025 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0030 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0032 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0033 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0034 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0035 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0036 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0072 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0073 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0074 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0079 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0080 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0083 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0084 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0085 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0086 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0087 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0088 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0089 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0090 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0091 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0092 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0093 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0095 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0096 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0097 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0098 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0099 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0101 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0103 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0104 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0105 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0106 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0107 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0108 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0109 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0110 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0111 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0112 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0113 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0117 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0122 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0001g0125 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0004g0006 | 0/0 | 9 | 9 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0004g0031 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0004g0077 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0006g0020 | 0/0 | 3 | 0 | 0 | 0 | 0 | 3 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0007g0001 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0007g0007 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0008g0120 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0008g0121 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0011g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0015g0008 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0016g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0017g0094 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0018g0006 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0019g0082 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0020g0100 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0021g0102 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0001c0001t0024g0036 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0002 | 0/0 | 16 | 0 | 0 | 15 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0010 | 0/0 | 5 | 0 | 3 | 0 | 2 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0013 | 0/0 | 4 | 0 | 0 | 4 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0015 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0029 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0040 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0057 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0060 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0061 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0062 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0063 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0064 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0065 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0067 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0069 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0070 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0071 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0114 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0002g0116 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0003 | 0/1 | 12 | 1 | 4 | 3 | 2 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0012 | 0/0 | 4 | 0 | 1 | 2 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0016 | 0/0 | 3 | 0 | 2 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0017 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0027 | 0/0 | 2 | 0 | 1 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0028 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0037 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0038 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0039 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0041 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0042 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0046 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0047 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0048 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0049 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0053 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0055 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0056 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0068 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0003g0118 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0005g0003 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0005g0124 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0009g0002 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0012g0026 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0013g0123 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0014g0054 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0002t0022g0002 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0003t0002g0002 | 0/0 | 3 | 0 | 0 | 1 | 0 | 2 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0003t0002g0066 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0003t0002g0115 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0003t0003g0050 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0003t0023g0126 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0002c0006t0010g0059 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0003c0004t0001g0005 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0003c0004t0001g0019 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0003c0004t0001g0025 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0004c0005t0001g0001 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0004c0005t0001g0081 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0005c0010t0001g0075 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0005c0011t0001g0076 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0006c0008t0001g0001 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0007c0007t0001g0001 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| a0008c0009t0001g0001 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0001 | g0099 | EUR | GBR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00099 | hp2 | a0002 | c0002 | t0003 | g0016 | EUR | GBR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00140 | hp1 | a0002 | c0002 | t0003 | g0039 | EUR | GBR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00280 | hp1 | a0002 | c0002 | t0003 | g0003 | EUR | FIN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00323 | hp1 | a0001 | c0001 | t0001 | g0093 | EUR | FIN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00323 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00408 | hp1 | a0002 | c0002 | t0002 | g0013 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00408 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00423 | hp1 | a0001 | c0001 | t0001 | g0085 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00423 | hp2 | a0002 | c0002 | t0002 | g0002 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00544 | hp1 | a0001 | c0001 | t0001 | g0035 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00544 | hp2 | a0004 | c0005 | t0001 | g0001 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00558 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00558 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00597 | hp1 | a0002 | c0002 | t0002 | g0071 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00597 | hp2 | a0001 | c0001 | t0001 | g0110 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00609 | hp1 | a0002 | c0002 | t0003 | g0003 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00621 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00639 | hp2 | a0002 | c0002 | t0003 | g0037 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00642 | hp1 | a0002 | c0002 | t0003 | g0016 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | CHS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00733 | hp1 | a0002 | c0002 | t0003 | g0012 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00733 | hp2 | a0002 | c0002 | t0003 | g0003 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00735 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00735 | hp2 | a0002 | c0002 | t0003 | g0038 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00738 | hp1 | a0001 | c0001 | t0004 | g0031 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00741 | hp1 | a0001 | c0001 | t0004 | g0031 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG00741 | hp2 | a0006 | c0008 | t0001 | g0001 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01069 | hp2 | a0001 | c0001 | t0001 | g0033 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01071 | hp1 | a0002 | c0002 | t0002 | g0010 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01071 | hp2 | a0001 | c0001 | t0001 | g0033 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01074 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01081 | hp1 | a0001 | c0001 | t0001 | g0018 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01081 | hp2 | a0002 | c0002 | t0003 | g0016 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01099 | hp1 | a0002 | c0003 | t0003 | g0050 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01106 | hp1 | a0002 | c0002 | t0003 | g0047 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01109 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0034 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01168 | hp1 | a0002 | c0002 | t0003 | g0028 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01168 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01169 | hp1 | a0001 | c0001 | t0001 | g0034 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01169 | hp2 | a0002 | c0002 | t0003 | g0028 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01175 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01175 | hp2 | a0002 | c0002 | t0003 | g0056 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01192 | hp1 | a0002 | c0002 | t0003 | g0053 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01243 | hp2 | a0001 | c0001 | t0001 | g0005 | AMR | PUR | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01255 | hp1 | a0002 | c0002 | t0002 | g0040 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01256 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01257 | hp1 | a0001 | c0001 | t0001 | g0032 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01257 | hp2 | a0001 | c0001 | t0001 | g0011 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01258 | hp2 | a0001 | c0001 | t0001 | g0032 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01261 | hp2 | a0001 | c0001 | t0001 | g0058 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01346 | hp1 | a0001 | c0001 | t0001 | g0108 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01346 | hp2 | a0002 | c0002 | t0003 | g0003 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01358 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01433 | hp1 | a0002 | c0002 | t0003 | g0003 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01496 | hp1 | a0001 | c0001 | t0001 | g0011 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01496 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01515 | hp1 | a0002 | c0002 | t0002 | g0010 | EUR | IBS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01517 | hp1 | a0002 | c0002 | t0002 | g0010 | EUR | IBS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01517 | hp2 | a0007 | c0007 | t0001 | g0001 | EUR | IBS | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01884 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01884 | hp2 | a0001 | c0001 | t0004 | g0006 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01891 | hp1 | a0001 | c0001 | t0001 | g0122 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01891 | hp2 | a0004 | c0005 | t0001 | g0081 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01928 | hp2 | a0001 | c0001 | t0001 | g0011 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01934 | hp2 | a0001 | c0001 | t0001 | g0089 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0004 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01952 | hp1 | a0002 | c0002 | t0003 | g0118 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01978 | hp1 | a0002 | c0002 | t0003 | g0027 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01978 | hp2 | a0002 | c0002 | t0002 | g0065 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01993 | hp1 | a0002 | c0002 | t0002 | g0010 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01993 | hp2 | a0001 | c0001 | t0001 | g0086 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02004 | hp1 | a0001 | c0001 | t0020 | g0100 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02004 | hp2 | a0001 | c0001 | t0001 | g0011 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02015 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02027 | hp2 | a0001 | c0001 | t0001 | g0023 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02040 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02055 | hp1 | a0001 | c0001 | t0008 | g0120 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02056 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02071 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02074 | hp1 | a0001 | c0001 | t0001 | g0095 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02080 | hp1 | a0001 | c0001 | t0001 | g0022 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02080 | hp2 | a0002 | c0002 | t0002 | g0002 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02083 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02129 | hp1 | a0002 | c0002 | t0012 | g0026 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02132 | hp2 | a0001 | c0001 | t0001 | g0035 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02135 | hp2 | a0002 | c0002 | t0002 | g0013 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02148 | hp1 | a0002 | c0002 | t0003 | g0003 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02148 | hp2 | a0001 | c0001 | t0001 | g0084 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02165 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | CDX | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02165 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | CDX | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02257 | hp1 | a0001 | c0001 | t0001 | g0004 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02257 | hp2 | a0001 | c0001 | t0024 | g0036 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02258 | hp1 | a0001 | c0001 | t0001 | g0004 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02280 | hp1 | a0005 | c0011 | t0001 | g0076 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02280 | hp2 | a0001 | c0001 | t0004 | g0006 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02293 | hp1 | a0001 | c0001 | t0001 | g0011 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02293 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02451 | hp1 | a0002 | c0006 | t0010 | g0059 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02451 | hp2 | a0001 | c0001 | t0007 | g0001 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02523 | hp1 | a0001 | c0001 | t0001 | g0023 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02523 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0014 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02602 | hp1 | a0001 | c0001 | t0001 | g0088 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02615 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02615 | hp2 | a0001 | c0001 | t0001 | g0007 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02622 | hp1 | a0002 | c0003 | t0023 | g0126 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02622 | hp2 | a0001 | c0001 | t0001 | g0024 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02630 | hp1 | a0001 | c0001 | t0001 | g0087 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02630 | hp2 | a0001 | c0001 | t0001 | g0097 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02647 | hp1 | a0001 | c0001 | t0004 | g0006 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02683 | hp1 | a0001 | c0001 | t0001 | g0104 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02683 | hp2 | a0002 | c0002 | t0002 | g0069 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02698 | hp2 | a0001 | c0001 | t0001 | g0125 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02717 | hp2 | a0001 | c0001 | t0001 | g0014 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02735 | hp1 | a0002 | c0002 | t0002 | g0002 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02738 | hp1 | a0002 | c0002 | t0014 | g0054 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02809 | hp1 | a0001 | c0001 | t0001 | g0112 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02809 | hp2 | a0002 | c0002 | t0002 | g0015 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02818 | hp1 | a0002 | c0002 | t0002 | g0015 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02818 | hp2 | a0001 | c0001 | t0001 | g0090 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02886 | hp1 | a0001 | c0001 | t0004 | g0006 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02886 | hp2 | a0001 | c0001 | t0001 | g0111 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02895 | hp1 | a0001 | c0001 | t0004 | g0006 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02896 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02896 | hp2 | a0001 | c0001 | t0004 | g0077 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02897 | hp1 | a0001 | c0001 | t0004 | g0006 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02897 | hp2 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02922 | hp1 | a0001 | c0001 | t0001 | g0014 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02922 | hp2 | a0001 | c0001 | t0001 | g0014 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02965 | hp1 | a0001 | c0001 | t0001 | g0024 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02970 | hp1 | a0001 | c0001 | t0007 | g0001 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02970 | hp2 | a0001 | c0001 | t0001 | g0005 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02976 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02976 | hp2 | a0001 | c0001 | t0001 | g0074 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03017 | hp1 | a0002 | c0002 | t0002 | g0063 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03041 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03041 | hp2 | a0003 | c0004 | t0001 | g0019 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03098 | hp1 | a0003 | c0004 | t0001 | g0005 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03130 | hp1 | a0001 | c0001 | t0004 | g0006 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03139 | hp1 | a0001 | c0001 | t0001 | g0072 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03195 | hp1 | a0001 | c0001 | t0004 | g0006 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03195 | hp2 | a0001 | c0001 | t0001 | g0030 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0019 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03225 | hp1 | a0002 | c0002 | t0002 | g0015 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03453 | hp1 | a0001 | c0001 | t0001 | g0004 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03453 | hp2 | a0001 | c0001 | t0008 | g0121 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03486 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03486 | hp2 | a0001 | c0001 | t0001 | g0113 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03490 | hp1 | a0002 | c0002 | t0013 | g0123 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03491 | hp1 | a0001 | c0001 | t0006 | g0020 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03491 | hp2 | a0008 | c0009 | t0001 | g0001 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03492 | hp1 | a0001 | c0001 | t0006 | g0020 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03516 | hp1 | a0001 | c0001 | t0001 | g0079 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03516 | hp2 | a0002 | c0002 | t0003 | g0003 | AFR | ESN | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03540 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03540 | hp2 | a0001 | c0001 | t0001 | g0019 | AFR | GWD | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03579 | hp2 | a0001 | c0001 | t0001 | g0005 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03654 | hp1 | a0002 | c0002 | t0003 | g0003 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03669 | hp1 | a0002 | c0002 | t0003 | g0048 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03669 | hp2 | a0002 | c0003 | t0002 | g0002 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03688 | hp1 | a0002 | c0002 | t0003 | g0046 | SAS | STU | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03704 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03704 | hp2 | a0001 | c0001 | t0017 | g0094 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03710 | hp2 | a0001 | c0001 | t0001 | g0004 | SAS | PJL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03831 | hp1 | a0001 | c0001 | t0001 | g0007 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03831 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03834 | hp1 | a0002 | c0002 | t0002 | g0067 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03834 | hp2 | a0002 | c0002 | t0022 | g0002 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03927 | hp1 | a0002 | c0002 | t0002 | g0116 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03927 | hp2 | a0002 | c0003 | t0002 | g0115 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG04115 | hp1 | a0002 | c0002 | t0003 | g0027 | SAS | STU | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG04184 | hp1 | a0002 | c0002 | t0003 | g0012 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG04184 | hp2 | a0001 | c0001 | t0001 | g0009 | SAS | BEB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG04199 | hp1 | a0002 | c0002 | t0003 | g0049 | SAS | STU | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG04204 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | STU | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG04228 | hp1 | a0001 | c0001 | t0006 | g0020 | SAS | STU | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18522 | hp2 | a0001 | c0001 | t0001 | g0007 | AFR | YRI | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18612 | hp1 | a0002 | c0002 | t0003 | g0026 | EAS | CHB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18906 | hp1 | a0001 | c0001 | t0001 | g0005 | AFR | YRI | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18906 | hp2 | a0001 | c0001 | t0004 | g0006 | AFR | YRI | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18940 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18941 | hp1 | a0002 | c0002 | t0002 | g0057 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18941 | hp2 | a0002 | c0002 | t0005 | g0124 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18942 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18942 | hp2 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18943 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18944 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18945 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18948 | hp2 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18949 | hp1 | a0001 | c0001 | t0001 | g0080 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18949 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18950 | hp1 | a0002 | c0002 | t0009 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18950 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18952 | hp1 | a0002 | c0002 | t0005 | g0003 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18953 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18954 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18954 | hp2 | a0001 | c0001 | t0001 | g0022 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18956 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18956 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18957 | hp1 | a0001 | c0001 | t0001 | g0098 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18957 | hp2 | a0002 | c0002 | t0003 | g0051 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18959 | hp1 | a0002 | c0002 | t0003 | g0012 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18960 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18961 | hp1 | a0002 | c0002 | t0002 | g0064 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18963 | hp1 | a0001 | c0001 | t0001 | g0091 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18963 | hp2 | a0001 | c0001 | t0001 | g0078 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18964 | hp1 | a0001 | c0001 | t0016 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18964 | hp2 | a0002 | c0002 | t0003 | g0012 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18965 | hp1 | a0002 | c0002 | t0003 | g0017 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18966 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18967 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18968 | hp1 | a0001 | c0001 | t0001 | g0103 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18968 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18969 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18969 | hp2 | a0002 | c0003 | t0002 | g0066 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18970 | hp2 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18971 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18975 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18975 | hp2 | a0001 | c0001 | t0015 | g0008 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18977 | hp1 | a0002 | c0002 | t0002 | g0013 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18978 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18978 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18979 | hp1 | a0002 | c0002 | t0002 | g0060 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18979 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18981 | hp1 | a0002 | c0002 | t0003 | g0044 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18981 | hp2 | a0001 | c0001 | t0001 | g0022 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18982 | hp2 | a0001 | c0001 | t0011 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18983 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18984 | hp1 | a0002 | c0002 | t0002 | g0070 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18985 | hp1 | a0002 | c0002 | t0003 | g0043 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18989 | hp1 | a0002 | c0002 | t0003 | g0052 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18990 | hp2 | a0001 | c0001 | t0001 | g0083 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18994 | hp1 | a0002 | c0002 | t0002 | g0013 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18995 | hp1 | a0002 | c0002 | t0003 | g0068 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18998 | hp1 | a0001 | c0001 | t0001 | g0117 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18998 | hp2 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19000 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19003 | hp1 | a0002 | c0002 | t0003 | g0003 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19003 | hp2 | a0002 | c0003 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19004 | hp1 | a0002 | c0002 | t0003 | g0055 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19005 | hp2 | a0001 | c0001 | t0001 | g0119 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19007 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19009 | hp2 | a0001 | c0001 | t0001 | g0023 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19010 | hp1 | a0002 | c0002 | t0003 | g0017 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19010 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0092 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19030 | hp1 | a0005 | c0010 | t0001 | g0075 | AFR | LWK | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19030 | hp2 | a0001 | c0001 | t0001 | g0021 | AFR | LWK | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0024 | AFR | LWK | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19055 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19056 | hp1 | a0002 | c0002 | t0002 | g0062 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19058 | hp1 | a0002 | c0002 | t0002 | g0029 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19059 | hp1 | a0002 | c0002 | t0003 | g0045 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19059 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19060 | hp2 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19062 | hp1 | a0003 | c0004 | t0001 | g0025 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19063 | hp2 | a0001 | c0001 | t0001 | g0009 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19064 | hp1 | a0002 | c0002 | t0005 | g0003 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19064 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19065 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19065 | hp2 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19066 | hp2 | a0003 | c0004 | t0001 | g0025 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19067 | hp1 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19068 | hp1 | a0002 | c0002 | t0002 | g0114 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19070 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19074 | hp1 | a0001 | c0001 | t0001 | g0106 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19074 | hp2 | a0002 | c0002 | t0003 | g0003 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19075 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19076 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19077 | hp1 | a0001 | c0001 | t0019 | g0082 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19077 | hp2 | a0002 | c0002 | t0002 | g0029 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19079 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19081 | hp1 | a0001 | c0001 | t0001 | g0008 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19081 | hp2 | a0002 | c0002 | t0002 | g0002 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19082 | hp1 | a0001 | c0001 | t0001 | g0101 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19083 | hp1 | a0002 | c0002 | t0003 | g0041 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19085 | hp2 | a0001 | c0001 | t0001 | g0096 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19086 | hp1 | a0002 | c0002 | t0003 | g0017 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19087 | hp1 | a0001 | c0001 | t0001 | g0105 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19087 | hp2 | a0002 | c0002 | t0003 | g0042 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19089 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19091 | hp1 | a0001 | c0001 | t0001 | g0007 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19240 | hp1 | a0001 | c0001 | t0001 | g0018 | AFR | YRI | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA19240 | hp2 | a0001 | c0001 | t0021 | g0102 | AFR | YRI | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA20129 | hp1 | a0001 | c0001 | t0001 | g0021 | AFR | ASW | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | ASW | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA20752 | hp2 | a0001 | c0001 | t0001 | g0021 | EUR | TSI | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA20805 | hp1 | a0002 | c0002 | t0003 | g0003 | EUR | TSI | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA20905 | hp1 | a0002 | c0003 | t0002 | g0002 | SAS | GIH | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01123 | hp1 | a0002 | c0002 | t0002 | g0010 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG01123 | hp2 | a0002 | c0002 | t0002 | g0061 | AMR | CLM | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02109 | hp1 | a0001 | c0001 | t0001 | g0107 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02109 | hp2 | a0001 | c0001 | t0001 | g0030 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02559 | hp1 | a0001 | c0001 | t0001 | g0109 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG02559 | hp2 | a0001 | c0001 | t0001 | g0036 | AFR | ACB | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG03471 | hp1 | a0001 | c0001 | t0001 | g0073 | AFR | MSL | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG06807 | hp1 | a0001 | c0001 | t0018 | g0006 | AFR | USA | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| HG06807 | hp2 | a0001 | c0001 | t0001 | g0018 | AFR | USA | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA18955 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA20300 | hp1 | a0001 | c0001 | t0007 | g0007 | AFR | USA | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA20300 | hp2 | a0001 | c0001 | t0001 | g0001 | AFR | USA | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA21309 | hp1 | a0001 | c0001 | t0001 | g0001 | AFR | LWK | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| NA21309 | hp2 | a0001 | c0001 | t0001 | g0025 | AFR | LWK | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| homoSapiens | chm13v2 | a0002 | c0002 | t0003 | g0003 | REF | REF | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| homoSapiens | grch38p0 | a0001 | c0001 | t0001 | g0004 | REF | REF | GAGE1_chrX_49594020_49613538 | GAGE1 | chrX | 49594020 | 49613538 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49600198 | CTAT | C | 1 | a0002 | 105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
disruptive_inframe_deletion | MODERATE | c.29_31delATT | p.Tyr10del | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/5 | 145/2993 | 29/354 | 10/117 | INFO_REALIGN_3_PRIME | chrX | 49600198 | ||
| chrX:49600205 | T | C | 1 | a0002 | 105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
missense_variant | MODERATE | c.31T>C | p.Trp11Arg | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/5 | 147/2993 | 31/354 | 11/117 | chrX | 49600205 | |||
| chrX:49600229 | C | G | 1 | a0002 | 105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
missense_variant | MODERATE | c.55C>G | p.Gln19Glu | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/5 | 171/2993 | 55/354 | 19/117 | chrX | 49600229 | |||
| chrX:49600235 | C | T | 1 | a0007 | 1 | HG01517.hp2 | missense_variant | MODERATE | c.61C>T | p.Pro21Ser | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/5 | 177/2993 | 61/354 | 21/117 | chrX | 49600235 | |||
| chrX:49600727 | G | A | 1 | a0006 | 1 | HG00741.hp2 | missense_variant | MODERATE | c.88G>A | p.Glu30Lys | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/5 | 204/2993 | 88/354 | 30/117 | chrX | 49600727 | |||
| chrX:49600742 | G | T | 1 | a0005 | 1 | HG02280.hp1 | stop_gained | HIGH | c.103G>T | p.Glu35* | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/5 | 219/2993 | 103/354 | 35/117 | chrX | 49600742 | |||
| chrX:49600811 | G | T | 1 | a0005 | 1 | NA19030.hp1 | stop_gained | HIGH | c.172G>T | p.Glu58* | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/5 | 288/2993 | 172/354 | 58/117 | chrX | 49600811 | |||
| chrX:49600813 | G | C | 1 | a0002 | 1 | HG02451.hp1 | missense_variant | MODERATE | c.174G>C | p.Glu58Asp | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/5 | 290/2993 | 174/354 | 58/117 | chrX | 49600813 | |||
| chrX:49600817 | G | C | 1 | a0004 | 2 | HG00544.hp2 HG01891.hp2 |
missense_variant | MODERATE | c.178G>C | p.Glu60Gln | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/5 | 294/2993 | 178/354 | 60/117 | chrX | 49600817 | |||
| chrX:49603683 | C | A | 1 | a0008 | 1 | HG03491.hp2 | missense_variant | MODERATE | c.221C>A | p.Ala74Asp | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/5 | 337/2993 | 221/354 | 74/117 | chrX | 49603683 | |||
| chrX:49603685 | G | C | 2 | a0002 a0003 |
11 | HG01099.hp1 HG02622.hp1 HG03041.hp2 others(8): Show |
missense_variant | MODERATE | c.223G>C | p.Asp75His | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/5 | 339/2993 | 223/354 | 75/117 | chrX | 49603685 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49600219 | G | A | 3 | a0002c0002 a0002c0003 a0002c0006 |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
synonymous_variant | LOW | c.45G>A | p.Arg15Arg | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/5 | 161/2993 | 45/354 | 15/117 | chrX | 49600219 | |||
| chrX:49600225 | T | C | 3 | a0002c0002 a0002c0003 a0002c0006 |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
synonymous_variant | LOW | c.51T>C | p.Tyr17Tyr | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/5 | 167/2993 | 51/354 | 17/117 | chrX | 49600225 | |||
| chrX:49600234 | T | C | 1 | a0007c0007 | 1 | HG01517.hp2 | synonymous_variant | LOW | c.60T>C | p.Pro20Pro | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/5 | 176/2993 | 60/354 | 20/117 | chrX | 49600234 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49599031 | G | A | 1 | a0002c0002t0009 | 1 | NA18950.hp1 | 5_prime_UTR_variant | MODIFIER | c.-105G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/5 | 1144 | chrX | 49599031 | ||||||
| chrX:49599034 | C | A | 1 | a0002c0006t0010 | 1 | HG02451.hp1 | 5_prime_UTR_variant | MODIFIER | c.-102C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/5 | 1141 | chrX | 49599034 | ||||||
| chrX:49599045 | C | T | 1 | a0001c0001t0024 | 1 | HG02257.hp2 | 5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-91C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/5 | chrX | 49599045 | |||||||
| chrX:49606016 | A | T | 1 | a0002c0003t0023 | 1 | HG02622.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1 | chrX | 49606016 | ||||||
| chrX:49606042 | C | G | 1 | a0002c0002t0022 | 1 | HG03834.hp2 | 3_prime_UTR_variant | MODIFIER | c.*27C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 27 | chrX | 49606042 | ||||||
| chrX:49606061 | T | C | 1 | a0001c0001t0011 | 1 | NA18982.hp2 | 3_prime_UTR_variant | MODIFIER | c.*46T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 46 | chrX | 49606061 | ||||||
| chrX:49606175 | C | A | 13 | a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 others(10): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
3_prime_UTR_variant | MODIFIER | c.*160C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 160 | chrX | 49606175 | ||||||
| chrX:49606175 | C | G | 1 | a0001c0001t0021 | 1 | NA19240.hp2 | 3_prime_UTR_variant | MODIFIER | c.*160C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 160 | chrX | 49606175 | ||||||
| chrX:49606184 | A | T | 12 | a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 others(9): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
3_prime_UTR_variant | MODIFIER | c.*169A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 169 | chrX | 49606184 | ||||||
| chrX:49606238 | A | C | 1 | a0001c0001t0008 | 2 | HG02055.hp1 HG03453.hp2 |
3_prime_UTR_variant | MODIFIER | c.*223A>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 223 | chrX | 49606238 | ||||||
| chrX:49606298 | G | A | 12 | a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 others(9): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
3_prime_UTR_variant | MODIFIER | c.*283G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 283 | chrX | 49606298 | ||||||
| chrX:49606320 | T | C | 13 | a0001c0001t0006 a0002c0002t0002 a0002c0002t0003 others(10): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
3_prime_UTR_variant | MODIFIER | c.*305T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 305 | chrX | 49606320 | ||||||
| chrX:49606401 | G | T | 1 | a0001c0001t0020 | 1 | HG02004.hp1 | 3_prime_UTR_variant | MODIFIER | c.*386G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 386 | chrX | 49606401 | ||||||
| chrX:49606520 | A | G | 1 | a0002c0002t0014 | 1 | HG02738.hp1 | 3_prime_UTR_variant | MODIFIER | c.*505A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 505 | chrX | 49606520 | ||||||
| chrX:49606566 | C | T | 1 | a0002c0003t0023 | 1 | HG02622.hp1 | 3_prime_UTR_variant | MODIFIER | c.*551C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 551 | chrX | 49606566 | ||||||
| chrX:49606886 | A | G | 1 | a0001c0001t0019 | 1 | NA19077.hp1 | 3_prime_UTR_variant | MODIFIER | c.*871A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 871 | chrX | 49606886 | ||||||
| chrX:49607075 | G | A | 1 | a0002c0002t0012 | 1 | HG02129.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1060G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1060 | chrX | 49607075 | ||||||
| chrX:49607150 | T | G | 1 | a0002c0002t0005 | 3 | NA18941.hp2 NA18952.hp1 NA19064.hp1 |
3_prime_UTR_variant | MODIFIER | c.*1135T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1135 | chrX | 49607150 | ||||||
| chrX:49607456 | C | T | 1 | a0001c0001t0019 | 1 | NA19077.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1441C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1441 | chrX | 49607456 | ||||||
| chrX:49607458 | A | C | 1 | a0001c0001t0019 | 1 | NA19077.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1443A>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1443 | chrX | 49607458 | ||||||
| chrX:49607459 | T | A | 1 | a0001c0001t0019 | 1 | NA19077.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1444T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1444 | chrX | 49607459 | ||||||
| chrX:49607541 | C | T | 2 | a0001c0001t0004 a0001c0001t0018 |
13 | HG00738.hp1 HG00741.hp1 HG01884.hp2 others(10): Show |
3_prime_UTR_variant | MODIFIER | c.*1526C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1526 | chrX | 49607541 | ||||||
| chrX:49607597 | A | G | 1 | a0001c0001t0006 | 3 | HG03491.hp1 HG03492.hp1 HG04228.hp1 |
3_prime_UTR_variant | MODIFIER | c.*1582A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1582 | chrX | 49607597 | ||||||
| chrX:49607700 | A | C | 1 | a0001c0001t0017 | 1 | HG03704.hp2 | 3_prime_UTR_variant | MODIFIER | c.*1685A>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1685 | chrX | 49607700 | ||||||
| chrX:49607806 | C | T | 6 | a0002c0002t0003 a0002c0002t0005 a0002c0002t0012 others(3): Show |
52 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(49): Show |
3_prime_UTR_variant | MODIFIER | c.*1791C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1791 | chrX | 49607806 | ||||||
| chrX:49607826 | G | T | 1 | a0001c0001t0007 | 3 | HG02451.hp2 HG02970.hp1 NA20300.hp1 |
3_prime_UTR_variant | MODIFIER | c.*1811G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 1811 | chrX | 49607826 | ||||||
| chrX:49608061 | T | A | 1 | a0002c0002t0013 | 1 | HG03490.hp1 | 3_prime_UTR_variant | MODIFIER | c.*2046T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 2046 | chrX | 49608061 | ||||||
| chrX:49608112 | T | A | 1 | a0002c0003t0023 | 1 | HG02622.hp1 | 3_prime_UTR_variant | MODIFIER | c.*2097T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 2097 | chrX | 49608112 | ||||||
| chrX:49608222 | C | G | 1 | a0001c0001t0016 | 1 | NA18964.hp1 | 3_prime_UTR_variant | MODIFIER | c.*2207C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 2207 | chrX | 49608222 | ||||||
| chrX:49608294 | C | T | 1 | a0001c0001t0018 | 1 | HG06807.hp1 | 3_prime_UTR_variant | MODIFIER | c.*2279C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 2279 | chrX | 49608294 | ||||||
| chrX:49608428 | A | G | 1 | a0001c0001t0015 | 1 | NA18975.hp2 | 3_prime_UTR_variant | MODIFIER | c.*2413A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 5/5 | 2413 | chrX | 49608428 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:49599148 | T | G | 30 | a0002c0002t0002g0015 a0002c0002t0002g0040 a0002c0002t0003g0003 others(27): Show |
52 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(49): Show |
intron_variant | MODIFIER | c.-9+21T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599148 | |||||||
| chrX:49599208 | G | A | 1 | a0002c0002t0002g0057 | 1 | NA18941.hp1 | intron_variant | MODIFIER | c.-9+81G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599208 | |||||||
| chrX:49599228 | C | G | 1 | a0001c0001t0001g0125 | 1 | HG02698.hp2 | intron_variant | MODIFIER | c.-9+101C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599228 | |||||||
| chrX:49599228 | C | T | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.-9+101C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599228 | |||||||
| chrX:49599229 | G | C | 1 | a0001c0001t0001g0125 | 1 | HG02698.hp2 | intron_variant | MODIFIER | c.-9+102G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599229 | |||||||
| chrX:49599230 | A | G | 1 | a0001c0001t0001g0125 | 1 | HG02698.hp2 | intron_variant | MODIFIER | c.-9+103A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599230 | |||||||
| chrX:49599262 | C | G | 29 | a0002c0002t0002g0015 a0002c0002t0002g0040 a0002c0002t0003g0003 others(26): Show |
48 | HG00099.hp2 HG00280.hp1 HG00609.hp1 others(45): Show |
intron_variant | MODIFIER | c.-9+135C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599262 | |||||||
| chrX:49599287 | G | A | 1 | a0001c0001t0001g0058 | 1 | HG01261.hp2 | intron_variant | MODIFIER | c.-9+160G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599287 | |||||||
| chrX:49599353 | G | T | 7 | a0001c0001t0001g0025 a0001c0001t0001g0036 a0001c0001t0001g0122 others(4): Show |
8 | HG01891.hp1 HG02055.hp1 HG02257.hp2 others(5): Show |
intron_variant | MODIFIER | c.-9+226G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599353 | |||||||
| chrX:49599366 | C | T | 1 | a0001c0001t0001g0119 | 1 | NA19005.hp2 | intron_variant | MODIFIER | c.-9+239C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599366 | |||||||
| chrX:49599418 | C | T | 1 | a0002c0002t0003g0118 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.-9+291C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599418 | |||||||
| chrX:49599450 | C | T | 1 | a0002c0002t0003g0118 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.-9+323C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599450 | |||||||
| chrX:49599453 | C | CG | 5 | a0001c0001t0001g0117 a0002c0002t0002g0114 a0002c0002t0002g0116 others(2): Show |
5 | HG01175.hp2 HG03927.hp1 HG03927.hp2 others(2): Show |
intron_variant | MODIFIER | c.-9+331dupG | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49599453 | ||||||
| chrX:49599465 | G | A | 58 | a0001c0001t0008g0120 a0001c0001t0008g0121 a0002c0002t0002g0002 others(55): Show |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
intron_variant | MODIFIER | c.-9+338G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599465 | |||||||
| chrX:49599487 | C | A | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.-9+360C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599487 | |||||||
| chrX:49599502 | C | G | 58 | a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0013 others(55): Show |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
intron_variant | MODIFIER | c.-9+375C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599502 | |||||||
| chrX:49599510 | C | T | 1 | a0001c0001t0001g0122 | 1 | HG01891.hp1 | intron_variant | MODIFIER | c.-9+383C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599510 | |||||||
| chrX:49599513 | G | GC | 7 | a0002c0002t0002g0070 a0002c0002t0002g0071 a0002c0002t0002g0116 others(4): Show |
7 | HG00140.hp1 HG00597.hp1 HG01192.hp1 others(4): Show |
intron_variant | MODIFIER | c.-9+387dupC | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49599513 | ||||||
| chrX:49599515 | G | C | 58 | a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0013 others(55): Show |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
intron_variant | MODIFIER | c.-9+388G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599515 | |||||||
| chrX:49599515 | G | GC | 13 | a0001c0001t0001g0019 a0001c0001t0001g0078 a0001c0001t0001g0125 others(10): Show |
25 | HG00738.hp1 HG00741.hp1 HG01884.hp2 others(22): Show |
intron_variant | MODIFIER | c.-9+393dupC | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chrX | 49599515 | ||||||
| chrX:49599521 | T | C | 75 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 others(72): Show |
137 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(134): Show |
intron_variant | MODIFIER | c.-9+394T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599521 | |||||||
| chrX:49599521 | T | G | 1 | a0001c0001t0001g0122 | 1 | HG01891.hp1 | intron_variant | MODIFIER | c.-9+394T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599521 | |||||||
| chrX:49599538 | G | A | 1 | a0001c0001t0001g0079 | 1 | HG03516.hp1 | intron_variant | MODIFIER | c.-9+411G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599538 | |||||||
| chrX:49599623 | C | T | 1 | a0001c0001t0001g0125 | 1 | HG02698.hp2 | intron_variant | MODIFIER | c.-9+496C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599623 | |||||||
| chrX:49599647 | G | T | 8 | a0001c0001t0001g0024 a0001c0001t0001g0035 a0001c0001t0001g0109 others(5): Show |
11 | HG00544.hp1 HG00597.hp2 HG02132.hp2 others(8): Show |
intron_variant | MODIFIER | c.-9+520G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599647 | |||||||
| chrX:49599650 | G | C | 3 | a0001c0001t0001g0030 a0001c0001t0001g0072 a0001c0001t0001g0073 |
4 | HG02109.hp2 HG03139.hp1 HG03195.hp2 others(1): Show |
intron_variant | MODIFIER | c.-8-517G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599650 | |||||||
| chrX:49599666 | G | C | 16 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 others(13): Show |
28 | HG01081.hp1 HG01884.hp2 HG01891.hp1 others(25): Show |
intron_variant | MODIFIER | c.-8-501G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599666 | |||||||
| chrX:49599698 | A | G | 3 | a0002c0002t0003g0017 a0002c0002t0003g0051 a0002c0002t0003g0055 |
5 | NA18957.hp2 NA18965.hp1 NA19004.hp1 others(2): Show |
intron_variant | MODIFIER | c.-8-469A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599698 | |||||||
| chrX:49599774 | C | T | 1 | a0001c0001t0001g0113 | 1 | HG03486.hp2 | intron_variant | MODIFIER | c.-8-393C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599774 | |||||||
| chrX:49599801 | T | G | 45 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0030 others(42): Show |
87 | HG00408.hp1 HG00423.hp2 HG00597.hp1 others(84): Show |
intron_variant | MODIFIER | c.-8-366T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599801 | |||||||
| chrX:49599813 | G | C | 2 | a0002c0002t0002g0015 a0002c0002t0002g0040 |
4 | HG01255.hp1 HG02809.hp2 HG02818.hp1 others(1): Show |
intron_variant | MODIFIER | c.-8-354G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599813 | |||||||
| chrX:49599868 | G | C | 5 | a0002c0002t0003g0017 a0002c0002t0003g0026 a0002c0002t0003g0051 others(2): Show |
7 | HG02129.hp1 NA18612.hp1 NA18957.hp2 others(4): Show |
intron_variant | MODIFIER | c.-8-299G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49599868 | |||||||
| chrX:49600039 | T | G | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.-8-128T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49600039 | |||||||
| chrX:49600056 | T | C | 58 | a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0013 others(55): Show |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
intron_variant | MODIFIER | c.-8-111T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49600056 | |||||||
| chrX:49600087 | G | A | 1 | a0005c0010t0001g0075 | 1 | NA19030.hp1 | intron_variant | MODIFIER | c.-8-80G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49600087 | |||||||
| chrX:49600087 | G | C | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.-8-80G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49600087 | |||||||
| chrX:49600090 | A | T | 58 | a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0013 others(55): Show |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
intron_variant | MODIFIER | c.-8-77A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49600090 | |||||||
| chrX:49600128 | C | G | 73 | a0001c0001t0001g0018 a0001c0001t0001g0024 a0001c0001t0001g0030 others(70): Show |
136 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(133): Show |
intron_variant | MODIFIER | c.-8-39C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49600128 | |||||||
| chrX:49600134 | C | T | 1 | a0002c0002t0002g0069 | 1 | HG02683.hp2 | intron_variant | MODIFIER | c.-8-33C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 1/4 | chrX | 49600134 | |||||||
| chrX:49600280 | C | T | 1 | a0001c0001t0001g0108 | 1 | HG01346.hp1 | intron_variant | MODIFIER | c.84+22C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600280 | |||||||
| chrX:49600321 | C | T | 58 | a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0013 others(55): Show |
105 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(102): Show |
intron_variant | MODIFIER | c.84+63C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600321 | |||||||
| chrX:49600383 | T | G | 1 | a0001c0001t0001g0024 | 3 | HG02622.hp2 HG02965.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.84+125T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600383 | |||||||
| chrX:49600412 | AT | A | 32 | a0001c0001t0019g0082 a0002c0002t0003g0003 a0002c0002t0003g0012 others(29): Show |
52 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(49): Show |
intron_variant | MODIFIER | c.84+164delT | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chrX | 49600412 | ||||||
| chrX:49600461 | T | A | 1 | a0001c0001t0001g0083 | 1 | NA18990.hp2 | intron_variant | MODIFIER | c.84+203T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600461 | |||||||
| chrX:49600508 | A | G | 23 | a0002c0002t0002g0002 a0002c0002t0002g0010 a0002c0002t0002g0013 others(20): Show |
48 | HG00408.hp1 HG00423.hp2 HG00597.hp1 others(45): Show |
intron_variant | MODIFIER | c.85-216A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600508 | |||||||
| chrX:49600522 | C | T | 75 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 others(72): Show |
137 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(134): Show |
intron_variant | MODIFIER | c.85-202C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600522 | |||||||
| chrX:49600534 | G | T | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.85-190G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600534 | |||||||
| chrX:49600537 | C | T | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.85-187C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600537 | |||||||
| chrX:49600552 | A | G | 17 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 others(14): Show |
32 | HG00738.hp1 HG00741.hp1 HG01081.hp1 others(29): Show |
intron_variant | MODIFIER | c.85-172A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600552 | |||||||
| chrX:49600628 | G | T | 14 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 others(11): Show |
28 | HG00738.hp1 HG00741.hp1 HG01081.hp1 others(25): Show |
intron_variant | MODIFIER | c.85-96G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600628 | |||||||
| chrX:49600631 | C | A | 13 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 others(10): Show |
27 | HG00738.hp1 HG00741.hp1 HG01081.hp1 others(24): Show |
intron_variant | MODIFIER | c.85-93C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600631 | |||||||
| chrX:49600695 | T | C | 22 | a0001c0001t0001g0011 a0001c0001t0001g0018 a0001c0001t0001g0019 others(19): Show |
43 | HG00738.hp1 HG00741.hp1 HG01069.hp2 others(40): Show |
intron_variant | MODIFIER | c.85-29T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 2/4 | chrX | 49600695 | |||||||
| chrX:49600895 | T | G | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.205+51T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49600895 | |||||||
| chrX:49600896 | C | T | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.205+52C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49600896 | |||||||
| chrX:49600896 | CGT | C | 64 | a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0033 others(61): Show |
119 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(116): Show |
intron_variant | MODIFIER | c.205+66_205+67delTG | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49600896 | ||||||
| chrX:49600914 | CGTGT | C | 64 | a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0033 others(61): Show |
119 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(116): Show |
intron_variant | MODIFIER | c.205+83_205+86delGT others(2): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49600914 | ||||||
| chrX:49600965 | A | G | 1 | a0001c0001t0001g0107 | 1 | HG02109.hp1 | intron_variant | MODIFIER | c.205+121A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49600965 | |||||||
| chrX:49601021 | C | T | 64 | a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0033 others(61): Show |
120 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(117): Show |
intron_variant | MODIFIER | c.205+177C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601021 | |||||||
| chrX:49601048 | C | G | 1 | a0001c0001t0008g0121 | 1 | HG03453.hp2 | intron_variant | MODIFIER | c.205+204C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601048 | |||||||
| chrX:49601053 | G | A | 64 | a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0033 others(61): Show |
119 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(116): Show |
intron_variant | MODIFIER | c.205+209G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601053 | |||||||
| chrX:49601060 | A | T | 64 | a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0033 others(61): Show |
119 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(116): Show |
intron_variant | MODIFIER | c.205+216A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601060 | |||||||
| chrX:49601131 | T | TTTGAATT others(7): Show |
1 | a0001c0001t0019g0082 | 1 | NA19077.hp1 | intron_variant | MODIFIER | c.205+287_205+288ins others(14): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601131 | |||||||
| chrX:49601152 | C | T | 62 | a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0033 others(59): Show |
117 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(114): Show |
intron_variant | MODIFIER | c.205+308C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601152 | |||||||
| chrX:49601177 | A | G | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.205+333A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601177 | |||||||
| chrX:49601186 | T | G | 63 | a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0033 others(60): Show |
118 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(115): Show |
intron_variant | MODIFIER | c.205+342T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601186 | |||||||
| chrX:49601206 | C | G | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.205+362C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601206 | |||||||
| chrX:49601230 | G | A | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.205+386G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601230 | |||||||
| chrX:49601237 | T | C | 1 | a0001c0001t0001g0032 | 2 | HG01257.hp1 HG01258.hp2 |
intron_variant | MODIFIER | c.205+393T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601237 | |||||||
| chrX:49601338 | T | C | 33 | a0002c0002t0002g0015 a0002c0002t0002g0040 a0002c0002t0003g0003 others(30): Show |
55 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(52): Show |
intron_variant | MODIFIER | c.205+494T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601338 | |||||||
| chrX:49601515 | G | C | 82 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(79): Show |
194 | HG00099.hp1 HG00323.hp1 HG00323.hp2 others(191): Show |
intron_variant | MODIFIER | c.205+671G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601515 | |||||||
| chrX:49601579 | C | G | 6 | a0001c0001t0001g0008 a0001c0001t0001g0023 a0001c0001t0001g0105 others(3): Show |
14 | HG02027.hp2 HG02165.hp1 HG02523.hp1 others(11): Show |
intron_variant | MODIFIER | c.205+735C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601579 | |||||||
| chrX:49601581 | G | C | 1 | a0001c0001t0001g0105 | 1 | NA19087.hp1 | intron_variant | MODIFIER | c.205+737G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601581 | |||||||
| chrX:49601609 | A | G | 4 | a0001c0001t0001g0019 a0001c0001t0001g0113 a0001c0001t0001g0122 others(1): Show |
5 | HG01891.hp1 HG03041.hp2 HG03209.hp1 others(2): Show |
intron_variant | MODIFIER | c.205+765A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601609 | |||||||
| chrX:49601652 | T | C | 5 | a0002c0002t0003g0041 a0002c0002t0003g0042 a0002c0002t0003g0043 others(2): Show |
5 | NA18981.hp1 NA18985.hp1 NA19059.hp1 others(2): Show |
intron_variant | MODIFIER | c.205+808T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601652 | |||||||
| chrX:49601687 | A | G | 1 | a0002c0003t0003g0050 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.205+843A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601687 | |||||||
| chrX:49601709 | T | A | 1 | a0001c0001t0001g0087 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.205+865T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601709 | |||||||
| chrX:49601716 | G | C | 1 | a0002c0002t0002g0060 | 1 | NA18979.hp1 | intron_variant | MODIFIER | c.205+872G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601716 | |||||||
| chrX:49601762 | A | C | 3 | a0001c0001t0001g0030 a0001c0001t0001g0072 a0001c0001t0001g0073 |
4 | HG02109.hp2 HG03139.hp1 HG03195.hp2 others(1): Show |
intron_variant | MODIFIER | c.205+918A>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601762 | |||||||
| chrX:49601777 | C | G | 32 | a0002c0002t0002g0015 a0002c0002t0002g0040 a0002c0002t0003g0003 others(29): Show |
54 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(51): Show |
intron_variant | MODIFIER | c.205+933C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601777 | |||||||
| chrX:49601799 | C | G | 1 | a0002c0002t0003g0068 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.205+955C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601799 | |||||||
| chrX:49601801 | A | G | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.205+957A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601801 | |||||||
| chrX:49601829 | AT | A | 57 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(54): Show |
106 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(103): Show |
intron_variant | MODIFIER | c.205+989delT | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49601829 | ||||||
| chrX:49601904 | A | G | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.205+1060A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601904 | |||||||
| chrX:49601905 | C | T | 1 | a0002c0002t0002g0067 | 1 | HG03834.hp1 | intron_variant | MODIFIER | c.205+1061C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601905 | |||||||
| chrX:49601960 | G | A | 1 | a0002c0002t0002g0061 | 1 | HG01123.hp2 | intron_variant | MODIFIER | c.205+1116G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49601960 | |||||||
| chrX:49602023 | G | T | 1 | a0002c0002t0002g0071 | 1 | HG00597.hp1 | intron_variant | MODIFIER | c.205+1179G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602023 | |||||||
| chrX:49602142 | C | T | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.205+1298C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602142 | |||||||
| chrX:49602162 | G | A | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.205+1318G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602162 | |||||||
| chrX:49602172 | T | TAAAC | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.205+1329_205+1330i others(6): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49602172 | ||||||
| chrX:49602189 | T | A | 1 | a0001c0001t0001g0088 | 1 | HG02602.hp1 | intron_variant | MODIFIER | c.205+1345T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602189 | |||||||
| chrX:49602232 | A | C | 1 | a0001c0001t0001g0106 | 1 | NA19074.hp1 | intron_variant | MODIFIER | c.205+1388A>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602232 | |||||||
| chrX:49602296 | A | G | 1 | a0001c0001t0001g0104 | 1 | HG02683.hp1 | intron_variant | MODIFIER | c.206-1372A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602296 | |||||||
| chrX:49602335 | G | T | 59 | a0001c0001t0001g0103 a0001c0001t0006g0020 a0002c0002t0002g0002 others(56): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
intron_variant | MODIFIER | c.206-1333G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602335 | |||||||
| chrX:49602341 | C | G | 2 | a0001c0001t0008g0120 a0001c0001t0008g0121 |
2 | HG02055.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.206-1327C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602341 | |||||||
| chrX:49602367 | G | T | 1 | a0001c0001t0021g0102 | 1 | NA19240.hp2 | intron_variant | MODIFIER | c.206-1301G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602367 | |||||||
| chrX:49602372 | G | A | 29 | a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0018 others(26): Show |
58 | HG00738.hp1 HG00741.hp1 HG01081.hp1 others(55): Show |
intron_variant | MODIFIER | c.206-1296G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602372 | |||||||
| chrX:49602403 | C | A | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-1265C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602403 | |||||||
| chrX:49602421 | T | A | 59 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(56): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
intron_variant | MODIFIER | c.206-1247T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602421 | |||||||
| chrX:49602426 | G | A | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-1242G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602426 | |||||||
| chrX:49602497 | G | A | 19 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 others(16): Show |
34 | HG00738.hp1 HG00741.hp1 HG01081.hp1 others(31): Show |
intron_variant | MODIFIER | c.206-1171G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602497 | |||||||
| chrX:49602572 | A | ACT | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-1095_206-1094i others(4): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | 49602572 | ||||||
| chrX:49602611 | C | G | 2 | a0001c0001t0008g0120 a0001c0001t0008g0121 |
2 | HG02055.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.206-1057C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602611 | |||||||
| chrX:49602620 | T | C | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-1048T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602620 | |||||||
| chrX:49602637 | T | G | 2 | a0002c0002t0002g0114 a0002c0002t0003g0046 |
2 | HG03688.hp1 NA19068.hp1 |
intron_variant | MODIFIER | c.206-1031T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602637 | |||||||
| chrX:49602650 | T | C | 2 | a0001c0001t0008g0120 a0001c0001t0008g0121 |
2 | HG02055.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.206-1018T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602650 | |||||||
| chrX:49602674 | T | A | 1 | a0002c0002t0002g0116 | 1 | HG03927.hp1 | intron_variant | MODIFIER | c.206-994T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602674 | |||||||
| chrX:49602693 | A | G | 59 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(56): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
intron_variant | MODIFIER | c.206-975A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602693 | |||||||
| chrX:49602712 | T | C | 1 | a0001c0001t0001g0089 | 1 | HG01934.hp2 | intron_variant | MODIFIER | c.206-956T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602712 | |||||||
| chrX:49602727 | C | A | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-941C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602727 | |||||||
| chrX:49602739 | A | T | 1 | a0001c0001t0001g0117 | 1 | NA18998.hp1 | intron_variant | MODIFIER | c.206-929A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602739 | |||||||
| chrX:49602758 | G | A | 1 | a0001c0001t0001g0091 | 1 | NA18963.hp1 | intron_variant | MODIFIER | c.206-910G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602758 | |||||||
| chrX:49602864 | G | T | 1 | a0001c0001t0001g0024 | 3 | HG02622.hp2 HG02965.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.206-804G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602864 | |||||||
| chrX:49602904 | A | C | 4 | a0001c0001t0001g0011 a0001c0001t0001g0032 a0001c0001t0001g0033 others(1): Show |
10 | HG01069.hp2 HG01071.hp2 HG01257.hp1 others(7): Show |
intron_variant | MODIFIER | c.206-764A>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602904 | |||||||
| chrX:49602947 | G | A | 1 | a0002c0002t0013g0123 | 1 | HG03490.hp1 | intron_variant | MODIFIER | c.206-721G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602947 | |||||||
| chrX:49602979 | T | G | 4 | a0001c0001t0004g0006 a0001c0001t0004g0031 a0001c0001t0004g0077 others(1): Show |
13 | HG00738.hp1 HG00741.hp1 HG01884.hp2 others(10): Show |
intron_variant | MODIFIER | c.206-689T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49602979 | |||||||
| chrX:49603111 | C | G | 54 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(51): Show |
102 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(99): Show |
intron_variant | MODIFIER | c.206-557C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603111 | |||||||
| chrX:49603112 | A | G | 1 | a0002c0002t0003g0028 | 2 | HG01168.hp1 HG01169.hp2 |
intron_variant | MODIFIER | c.206-556A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603112 | |||||||
| chrX:49603360 | G | A | 1 | a0001c0001t0001g0021 | 3 | NA19030.hp2 NA20129.hp1 NA20752.hp2 |
intron_variant | MODIFIER | c.206-308G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603360 | |||||||
| chrX:49603360 | G | C | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-308G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603360 | |||||||
| chrX:49603386 | C | T | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-282C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603386 | |||||||
| chrX:49603414 | A | G | 59 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(56): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
intron_variant | MODIFIER | c.206-254A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603414 | |||||||
| chrX:49603415 | G | A | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-253G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603415 | |||||||
| chrX:49603467 | A | G | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.206-201A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603467 | |||||||
| chrX:49603475 | A | T | 18 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 others(15): Show |
33 | HG00738.hp1 HG00741.hp1 HG01081.hp1 others(30): Show |
intron_variant | MODIFIER | c.206-193A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603475 | |||||||
| chrX:49603511 | C | A | 16 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0024 others(13): Show |
31 | HG00738.hp1 HG00741.hp1 HG01081.hp1 others(28): Show |
intron_variant | MODIFIER | c.206-157C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603511 | |||||||
| chrX:49603511 | C | T | 2 | a0001c0001t0008g0120 a0001c0001t0008g0121 |
2 | HG02055.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.206-157C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603511 | |||||||
| chrX:49603597 | C | A | 1 | a0001c0001t0001g0092 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.206-71C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 3/4 | chrX | 49603597 | |||||||
| chrX:49603855 | G | C | 59 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(56): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
intron_variant | MODIFIER | c.331+62G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49603855 | |||||||
| chrX:49603855 | G | T | 2 | a0001c0001t0001g0101 a0001c0001t0001g0112 |
2 | HG02809.hp1 NA19082.hp1 |
intron_variant | MODIFIER | c.331+62G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49603855 | |||||||
| chrX:49603857 | C | G | 2 | a0001c0001t0001g0101 a0001c0001t0001g0112 |
2 | HG02809.hp1 NA19082.hp1 |
intron_variant | MODIFIER | c.331+64C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49603857 | |||||||
| chrX:49603987 | G | C | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.331+194G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49603987 | |||||||
| chrX:49603998 | G | A | 5 | a0001c0001t0001g0008 a0001c0001t0001g0105 a0001c0001t0001g0106 others(2): Show |
11 | HG02165.hp1 NA18940.hp1 NA18948.hp2 others(8): Show |
intron_variant | MODIFIER | c.331+205G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49603998 | |||||||
| chrX:49604009 | T | C | 1 | a0001c0001t0001g0090 | 1 | HG02818.hp2 | intron_variant | MODIFIER | c.331+216T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604009 | |||||||
| chrX:49604025 | G | T | 1 | a0002c0003t0002g0115 | 1 | HG03927.hp2 | intron_variant | MODIFIER | c.331+232G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604025 | |||||||
| chrX:49604044 | G | C | 1 | a0005c0011t0001g0076 | 1 | HG02280.hp1 | intron_variant | MODIFIER | c.331+251G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604044 | |||||||
| chrX:49604123 | G | T | 1 | a0002c0002t0002g0060 | 1 | NA18979.hp1 | intron_variant | MODIFIER | c.331+330G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604123 | |||||||
| chrX:49604160 | A | G | 3 | a0002c0002t0002g0010 a0002c0002t0002g0065 a0002c0003t0002g0066 |
7 | HG01071.hp1 HG01123.hp1 HG01515.hp1 others(4): Show |
intron_variant | MODIFIER | c.331+367A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604160 | |||||||
| chrX:49604229 | A | T | 1 | a0001c0001t0020g0100 | 1 | HG02004.hp1 | intron_variant | MODIFIER | c.331+436A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604229 | |||||||
| chrX:49604261 | A | C | 1 | a0001c0001t0001g0099 | 1 | HG00099.hp1 | intron_variant | MODIFIER | c.331+468A>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604261 | |||||||
| chrX:49604271 | A | G | 1 | a0001c0001t0001g0098 | 1 | NA18957.hp1 | intron_variant | MODIFIER | c.331+478A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604271 | |||||||
| chrX:49604280 | C | G | 1 | a0002c0002t0002g0064 | 1 | NA18961.hp1 | intron_variant | MODIFIER | c.331+487C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604280 | |||||||
| chrX:49604295 | G | T | 1 | a0001c0001t0001g0097 | 1 | HG02630.hp2 | intron_variant | MODIFIER | c.331+502G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604295 | |||||||
| chrX:49604317 | A | T | 2 | a0001c0001t0008g0120 a0001c0001t0008g0121 |
2 | HG02055.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.331+524A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604317 | |||||||
| chrX:49604363 | C | G | 2 | a0001c0001t0001g0022 a0001c0001t0001g0103 |
4 | HG02080.hp1 NA18954.hp2 NA18968.hp1 others(1): Show |
intron_variant | MODIFIER | c.331+570C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604363 | |||||||
| chrX:49604394 | A | G | 1 | a0001c0001t0001g0080 | 1 | NA18949.hp1 | intron_variant | MODIFIER | c.331+601A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604394 | |||||||
| chrX:49604442 | G | T | 1 | a0002c0002t0002g0063 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.331+649G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604442 | |||||||
| chrX:49604512 | T | C | 1 | a0002c0002t0003g0047 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.331+719T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604512 | |||||||
| chrX:49604517 | G | C | 1 | a0001c0001t0001g0093 | 1 | HG00323.hp1 | intron_variant | MODIFIER | c.331+724G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604517 | |||||||
| chrX:49604570 | G | T | 3 | a0001c0001t0001g0019 a0001c0001t0001g0113 a0003c0004t0001g0019 |
4 | HG03041.hp2 HG03209.hp1 HG03486.hp2 others(1): Show |
intron_variant | MODIFIER | c.331+777G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604570 | |||||||
| chrX:49604593 | T | G | 2 | a0001c0001t0008g0120 a0001c0001t0008g0121 |
2 | HG02055.hp1 HG03453.hp2 |
intron_variant | MODIFIER | c.331+800T>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604593 | |||||||
| chrX:49604672 | C | T | 1 | a0001c0001t0001g0096 | 1 | NA19085.hp2 | intron_variant | MODIFIER | c.331+879C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604672 | |||||||
| chrX:49604725 | A | C | 1 | a0001c0001t0001g0088 | 1 | HG02602.hp1 | intron_variant | MODIFIER | c.331+932A>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604725 | |||||||
| chrX:49604782 | G | T | 20 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0013 others(17): Show |
43 | HG00408.hp1 HG00423.hp2 HG00597.hp1 others(40): Show |
intron_variant | MODIFIER | c.331+989G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604782 | |||||||
| chrX:49604853 | G | T | 1 | a0001c0001t0001g0108 | 1 | HG01346.hp1 | intron_variant | MODIFIER | c.331+1060G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604853 | |||||||
| chrX:49604898 | C | T | 1 | a0002c0002t0003g0049 | 1 | HG04199.hp1 | intron_variant | MODIFIER | c.332-1095C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604898 | |||||||
| chrX:49604958 | C | G | 1 | a0001c0001t0001g0095 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.332-1035C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49604958 | |||||||
| chrX:49605005 | G | A | 2 | a0001c0001t0001g0018 a0001c0001t0001g0074 |
4 | HG01081.hp1 HG02976.hp2 HG06807.hp2 others(1): Show |
intron_variant | MODIFIER | c.332-988G>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605005 | |||||||
| chrX:49605018 | G | T | 1 | a0002c0002t0002g0062 | 1 | NA19056.hp1 | intron_variant | MODIFIER | c.332-975G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605018 | |||||||
| chrX:49605033 | C | A | 1 | a0001c0001t0017g0094 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.332-960C>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605033 | |||||||
| chrX:49605108 | A | G | 59 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(56): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
intron_variant | MODIFIER | c.332-885A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605108 | |||||||
| chrX:49605134 | G | T | 1 | a0001c0001t0001g0024 | 3 | HG02622.hp2 HG02965.hp1 NA19043.hp1 |
intron_variant | MODIFIER | c.332-859G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605134 | |||||||
| chrX:49605169 | G | T | 1 | a0002c0003t0002g0066 | 1 | NA18969.hp2 | intron_variant | MODIFIER | c.332-824G>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605169 | |||||||
| chrX:49605217 | G | C | 59 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(56): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
intron_variant | MODIFIER | c.332-776G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605217 | |||||||
| chrX:49605249 | A | G | 1 | a0002c0006t0010g0059 | 1 | HG02451.hp1 | intron_variant | MODIFIER | c.332-744A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605249 | |||||||
| chrX:49605362 | G | C | 1 | a0001c0001t0001g0113 | 1 | HG03486.hp2 | intron_variant | MODIFIER | c.332-631G>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605362 | |||||||
| chrX:49605381 | A | G | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.332-612A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605381 | |||||||
| chrX:49605382 | T | C | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.332-611T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605382 | |||||||
| chrX:49605385 | C | T | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.332-608C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605385 | |||||||
| chrX:49605434 | C | G | 1 | a0002c0002t0002g0065 | 1 | HG01978.hp2 | intron_variant | MODIFIER | c.332-559C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605434 | |||||||
| chrX:49605453 | T | A | 1 | a0001c0001t0019g0082 | 1 | NA19077.hp1 | intron_variant | MODIFIER | c.332-540T>A | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605453 | |||||||
| chrX:49605497 | A | T | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.332-496A>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605497 | |||||||
| chrX:49605524 | A | G | 1 | a0002c0002t0003g0048 | 1 | HG03669.hp1 | intron_variant | MODIFIER | c.332-469A>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605524 | |||||||
| chrX:49605600 | C | G | 1 | a0001c0001t0001g0125 | 1 | HG02698.hp2 | intron_variant | MODIFIER | c.332-393C>G | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605600 | |||||||
| chrX:49605681 | C | T | 1 | a0002c0003t0023g0126 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.332-312C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605681 | |||||||
| chrX:49605779 | C | T | 1 | a0002c0002t0003g0038 | 1 | HG00735.hp2 | intron_variant | MODIFIER | c.332-214C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605779 | |||||||
| chrX:49605796 | C | T | 58 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(55): Show |
107 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
intron_variant | MODIFIER | c.332-197C>T | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605796 | |||||||
| chrX:49605814 | T | C | 59 | a0001c0001t0006g0020 a0002c0002t0002g0002 a0002c0002t0002g0010 others(56): Show |
108 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(105): Show |
intron_variant | MODIFIER | c.332-179T>C | GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | chrX | 49605814 | |||||||
| chrX:49605908 | A | AAAT | 69 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0008 others(66): Show |
163 | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(160): Show |
intron_variant | MODIFIER | c.332-45_332-43dupAA others(1): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49605908 | ||||||
| chrX:49605908 | A | AAATAAT | 11 | a0001c0001t0001g0007 a0001c0001t0001g0035 a0001c0001t0001g0084 others(8): Show |
19 | HG00544.hp1 HG01978.hp1 HG02132.hp2 others(16): Show |
intron_variant | MODIFIER | c.332-48_332-43dupAA others(4): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49605908 | ||||||
| chrX:49605908 | A | AAATAATA others(2): Show |
11 | a0001c0001t0001g0009 a0001c0001t0001g0072 a0001c0001t0001g0078 others(8): Show |
16 | HG01891.hp2 HG01952.hp1 HG02129.hp1 others(13): Show |
intron_variant | MODIFIER | c.332-51_332-43dupAA others(7): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49605908 | ||||||
| chrX:49605908 | A | AAATAATA others(5): Show |
1 | a0002c0002t0003g0051 | 1 | NA18957.hp2 | intron_variant | MODIFIER | c.332-54_332-43dupAA others(10): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49605908 | ||||||
| chrX:49605908 | AAAT | A | 6 | a0001c0001t0004g0006 a0001c0001t0004g0077 a0001c0001t0018g0006 others(3): Show |
18 | HG00408.hp1 HG01168.hp1 HG01169.hp2 others(15): Show |
intron_variant | MODIFIER | c.332-45_332-43delAA others(1): Show |
GAGE1 | ENSG00000205777.19 | transcript | ENST00000381700.11 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | 49605908 |