JoGo LogoJoint Open Genome and Omics Platform (JoGo)
  • Home
    • General
    • Gene
    • Region
    • Variant
    • Haplotype
    • Haplotype by sample
    • ClinVar
    • GWASCatalog
    • GTEx
    • HaplotypeQTL
    • Haplotype
    • Position
    • Clinvar
    • Gene
    • Variant
    • Haplotype
    • Sample
    • FAQ
    • Contact
    • Fundings
    • Developer
    • ChIP-Atlas PeakBrowser
    • ToGoVAR
    • MGeND
    • Nagasaki Lab

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   CCL3L3_chr17_36189869_36201758  CCL3L3_chr17_36189869_36201758 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 414062
ensemblid ENSG00000276085.1
hgncid 30554
symbol CCL3L3
name C-C motif chemokine ligand 3 like 3
refseq_nuc NM_001001437.4
refseq_prot NP_001001437.2
ensembl_nuc ENST00000619989.1
ensembl_prot ENSP00000480558.1
mane_status MANE Select
chr chr17
start 36194869
end 36196758
strand -
ver v1.2
region chr17:36194869-36196758
region5000 chr17:36189869-36201758
regionname0 CCL3L3_chr17_36194869_36196758
regionname5000 CCL3L3_chr17_36189869_36201758

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 0/0 93 122 18 27 52 6 19 41 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0002 0/0 93 35 0 8 24 0 3 17 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0003 0/0 93 1 0 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 0/0 282 88 13 26 31 4 14 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
c0002 0/0 282 34 5 1 21 2 5 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
c0003 0/0 282 19 0 8 10 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
c0004 0/0 282 16 0 0 14 0 2 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
c0005 0/0 282 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 0/0 503 70 10 21 32 1 6 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
t0002 0/0 503 64 4 9 33 5 13 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
t0003 0/0 503 16 0 4 10 0 2 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
t0004 0/0 503 6 3 1 1 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
t0005 0/0 503 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
t0006 0/0 503 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 29 0 8 11 3 7 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0002 0/0 22 1 1 20 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0003 0/0 17 0 6 10 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0004 0/0 15 0 4 10 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0005 0/0 15 0 3 8 1 3 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0006 0/0 11 0 0 9 0 2 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0007 0/0 10 0 10 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0008 0/0 6 3 1 1 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0009 0/0 5 0 0 0 2 3 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0010 0/0 5 0 0 5 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0011 0/0 5 5 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0012 0/0 3 3 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0013 0/0 2 2 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0014 0/0 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0015 0/0 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0016 0/0 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0017 0/0 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0018 0/0 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0019 0/0 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0020 0/0 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0021 0/0 1 0 0 1 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0022 0/0 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0023 0/0 1 0 0 1 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0024 0/0 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0025 0/0 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
g0026 0/0 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 0/0 282 88 13 26 31 4 14 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0001c0002 0/0 282 34 5 1 21 2 5 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0002c0003 0/0 282 19 0 8 10 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0002c0004 0/0 282 16 0 0 14 0 2 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0003c0005 0/0 282 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 784 32 7 13 8 1 3 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0001c0001t0002 0/0 784 34 2 8 12 3 9 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0001c0001t0003 0/0 784 15 0 4 10 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0001c0001t0004 0/0 784 6 3 1 1 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0001c0001t0006 0/0 784 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0001c0002t0001 0/0 784 3 3 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0001c0002t0002 0/0 784 30 2 1 21 2 4 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0001c0002t0003 0/0 784 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0002c0003t0001 0/0 784 18 0 7 10 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0002c0003t0005 0/0 784 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0002c0004t0001 0/0 784 16 0 0 14 0 2 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758
a0003c0005t0001 0/0 784 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 copy fasta chr17 36189869 36201758

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0005 0/0 15 0 3 8 1 3 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0001g0007 0/0 10 0 10 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0001g0011 0/0 5 5 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0001g0016 0/0 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0001g0024 0/0 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0002g0001 0/0 29 0 8 11 3 7 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0002g0013 0/0 2 2 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0002g0017 0/0 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0002g0023 0/0 1 0 0 1 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0002g0026 0/0 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0003g0004 0/0 15 0 4 10 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0004g0008 0/0 6 3 1 1 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0001t0006g0015 0/0 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0002t0001g0012 0/0 3 3 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0002t0002g0002 0/0 22 1 1 20 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0002t0002g0009 0/0 5 0 0 0 2 3 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0002t0002g0018 0/0 1 1 0 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0002t0002g0021 0/0 1 0 0 1 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0002t0002g0025 0/0 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0001c0002t0003g0022 0/0 1 0 0 0 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0002c0003t0001g0003 0/0 17 0 6 10 0 1 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0002c0003t0001g0020 0/0 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0002c0003t0005g0014 0/0 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0002c0004t0001g0006 0/0 11 0 0 9 0 2 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0002c0004t0001g0010 0/0 5 0 0 5 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
a0003c0005t0001g0019 0/0 1 0 1 0 0 0 CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00280 hp1 a0001 c0001 t0002 g0001 EUR FIN CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00280 hp2 a0001 c0001 t0001 g0005 EUR FIN CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00423 hp1 a0002 c0004 t0001 g0006 EAS CHS CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00423 hp2 a0002 c0004 t0001 g0006 EAS CHS CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00609 hp1 a0001 c0002 t0002 g0002 EAS CHS CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00609 hp2 a0001 c0001 t0003 g0004 EAS CHS CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00642 hp1 a0001 c0001 t0002 g0001 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00642 hp2 a0001 c0001 t0001 g0007 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00735 hp1 a0001 c0001 t0001 g0007 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG00735 hp2 a0002 c0003 t0001 g0003 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01069 hp1 a0001 c0001 t0001 g0007 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01069 hp2 a0002 c0003 t0001 g0003 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01071 hp1 a0002 c0003 t0001 g0003 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01071 hp2 a0001 c0001 t0002 g0001 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01074 hp1 a0001 c0001 t0002 g0001 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01074 hp2 a0001 c0001 t0002 g0001 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01169 hp1 a0001 c0001 t0001 g0007 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01169 hp2 a0002 c0003 t0001 g0003 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01243 hp1 a0001 c0001 t0003 g0004 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01243 hp2 a0002 c0003 t0005 g0014 AMR PUR CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01255 hp1 a0001 c0001 t0001 g0007 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01255 hp2 a0001 c0001 t0002 g0001 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01346 hp1 a0001 c0001 t0001 g0007 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01346 hp2 a0003 c0005 t0001 g0019 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01358 hp1 a0001 c0002 t0002 g0002 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01358 hp2 a0001 c0001 t0002 g0001 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01361 hp1 a0001 c0001 t0004 g0008 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01361 hp2 a0001 c0001 t0002 g0001 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01496 hp1 a0001 c0001 t0001 g0007 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01496 hp2 a0001 c0001 t0003 g0004 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01516 hp1 a0001 c0001 t0002 g0001 EUR IBS CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01516 hp2 a0001 c0002 t0002 g0009 EUR IBS CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01517 hp1 a0001 c0001 t0002 g0001 EUR IBS CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01517 hp2 a0001 c0002 t0002 g0009 EUR IBS CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01884 hp1 a0001 c0001 t0001 g0024 AFR ACB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01884 hp2 a0001 c0002 t0002 g0002 AFR ACB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01934 hp1 a0001 c0001 t0001 g0007 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01934 hp2 a0002 c0003 t0001 g0003 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01975 hp1 a0001 c0001 t0001 g0007 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01975 hp2 a0001 c0001 t0001 g0005 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01981 hp1 a0001 c0001 t0001 g0005 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01981 hp2 a0001 c0001 t0003 g0004 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02027 hp1 a0001 c0001 t0002 g0001 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02027 hp2 a0002 c0004 t0001 g0010 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02056 hp1 a0001 c0001 t0002 g0001 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02056 hp2 a0001 c0001 t0002 g0001 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02071 hp1 a0001 c0001 t0002 g0001 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02071 hp2 a0001 c0001 t0001 g0005 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02083 hp1 a0002 c0004 t0001 g0006 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02083 hp2 a0002 c0004 t0001 g0010 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02135 hp1 a0001 c0001 t0002 g0001 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02135 hp2 a0001 c0001 t0003 g0004 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02155 hp1 a0002 c0004 t0001 g0006 EAS CDX CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02155 hp2 a0001 c0001 t0002 g0001 EAS CDX CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02257 hp1 a0001 c0001 t0001 g0011 AFR ACB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02257 hp2 a0001 c0001 t0001 g0011 AFR ACB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02273 hp1 a0002 c0003 t0001 g0003 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02273 hp2 a0001 c0001 t0001 g0007 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02280 hp1 a0001 c0001 t0004 g0008 AFR ACB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02280 hp2 a0001 c0001 t0002 g0013 AFR ACB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02293 hp1 a0001 c0001 t0001 g0005 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02293 hp2 a0002 c0003 t0001 g0020 AMR PEL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02523 hp1 a0001 c0002 t0002 g0002 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02523 hp2 a0002 c0003 t0001 g0003 EAS KHV CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02683 hp1 a0001 c0001 t0002 g0017 SAS PJL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02683 hp2 a0001 c0002 t0002 g0009 SAS PJL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02698 hp1 a0001 c0001 t0001 g0005 SAS PJL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02698 hp2 a0001 c0002 t0002 g0009 SAS PJL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02809 hp1 a0001 c0001 t0004 g0008 AFR GWD CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02809 hp2 a0001 c0001 t0004 g0008 AFR GWD CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03239 hp1 a0001 c0001 t0002 g0001 SAS PJL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03239 hp2 a0001 c0002 t0002 g0025 SAS PJL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03453 hp1 a0001 c0002 t0002 g0018 AFR MSL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03453 hp2 a0001 c0002 t0001 g0012 AFR MSL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03486 hp1 a0001 c0001 t0006 g0015 AFR MSL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03486 hp2 a0001 c0002 t0001 g0012 AFR MSL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03540 hp1 a0001 c0001 t0001 g0011 AFR GWD CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03540 hp2 a0001 c0001 t0001 g0011 AFR GWD CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03688 hp1 a0001 c0001 t0002 g0001 SAS STU CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03688 hp2 a0002 c0004 t0001 g0006 SAS STU CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03704 hp1 a0001 c0001 t0003 g0004 SAS PJL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03704 hp2 a0001 c0002 t0003 g0022 SAS PJL CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03831 hp1 a0002 c0003 t0001 g0003 SAS BEB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03831 hp2 a0001 c0001 t0001 g0005 SAS BEB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03834 hp1 a0002 c0004 t0001 g0006 SAS BEB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG03834 hp2 a0001 c0001 t0002 g0001 SAS BEB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG04115 hp1 a0001 c0001 t0002 g0001 SAS STU CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG04115 hp2 a0001 c0002 t0002 g0009 SAS STU CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG04184 hp1 a0001 c0001 t0004 g0008 SAS BEB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG04184 hp2 a0001 c0001 t0002 g0026 SAS BEB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG04204 hp1 a0001 c0001 t0002 g0001 SAS STU CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG04204 hp2 a0001 c0001 t0001 g0005 SAS STU CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18906 hp1 a0001 c0002 t0001 g0012 AFR YRI CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18906 hp2 a0001 c0001 t0002 g0013 AFR YRI CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18943 hp1 a0001 c0001 t0001 g0005 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18943 hp2 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18944 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18944 hp2 a0001 c0001 t0004 g0008 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18948 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18948 hp2 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18951 hp1 a0002 c0004 t0001 g0006 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18951 hp2 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18952 hp1 a0001 c0001 t0001 g0005 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18952 hp2 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18961 hp1 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18961 hp2 a0001 c0001 t0001 g0005 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18962 hp1 a0001 c0001 t0003 g0004 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18962 hp2 a0002 c0004 t0001 g0006 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18963 hp1 a0001 c0001 t0002 g0023 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18963 hp2 a0001 c0001 t0003 g0004 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18965 hp1 a0001 c0001 t0001 g0005 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18965 hp2 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18971 hp1 a0001 c0001 t0002 g0001 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18971 hp2 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18976 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18976 hp2 a0002 c0004 t0001 g0010 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18978 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18978 hp2 a0001 c0001 t0003 g0004 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18984 hp1 a0001 c0001 t0003 g0004 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18984 hp2 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18988 hp1 a0002 c0004 t0001 g0010 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18988 hp2 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18990 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18990 hp2 a0001 c0001 t0001 g0005 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18991 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18991 hp2 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18992 hp1 a0001 c0002 t0002 g0021 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18992 hp2 a0001 c0001 t0003 g0004 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18995 hp1 a0002 c0004 t0001 g0006 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA18995 hp2 a0001 c0001 t0001 g0005 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19001 hp1 a0001 c0001 t0001 g0005 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19001 hp2 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19012 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19012 hp2 a0001 c0001 t0003 g0004 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19056 hp1 a0001 c0001 t0003 g0004 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19056 hp2 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19062 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19062 hp2 a0001 c0001 t0003 g0004 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19064 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19064 hp2 a0001 c0001 t0002 g0001 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19066 hp1 a0001 c0001 t0002 g0001 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19066 hp2 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19067 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19067 hp2 a0001 c0001 t0002 g0001 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19072 hp1 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19072 hp2 a0002 c0004 t0001 g0006 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19077 hp1 a0002 c0003 t0001 g0003 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19077 hp2 a0002 c0004 t0001 g0010 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19078 hp1 a0002 c0004 t0001 g0006 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19078 hp2 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19080 hp1 a0001 c0001 t0002 g0001 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA19080 hp2 a0001 c0002 t0002 g0002 EAS JPT CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA20905 hp1 a0001 c0001 t0002 g0001 SAS GIH CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
NA20905 hp2 a0001 c0001 t0002 g0001 SAS GIH CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01123 hp1 a0001 c0001 t0002 g0001 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG01123 hp2 a0001 c0001 t0003 g0004 AMR CLM CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02486 hp1 a0001 c0001 t0001 g0011 AFR ACB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758
HG02486 hp2 a0001 c0001 t0001 g0016 AFR ACB CCL3L3_chr17_36189869_36201758 CCL3L3 chr17 36189869 36201758

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr17:36195296 A
A
 G
G
 2 a0002
a0003
a0002
a0003
 36 HG00423.hp1
HG00423.hp2
HG00735.hp2
others(33): Show 
HG00423.hp1
HG00423.hp2
HG00735.hp2
HG01069.hp2
HG01071.hp1
HG01169.hp2
HG01243.hp2
HG01346.hp2
HG01934.hp2
HG02027.hp2
HG02083.hp1
HG02083.hp2
HG02155.hp1
HG02273.hp1
HG02293.hp2
HG02523.hp2
HG03688.hp2
HG03831.hp1
HG03834.hp1
NA18943.hp2
NA18951.hp1
NA18952.hp2
NA18961.hp1
NA18962.hp2
NA18965.hp2
NA18976.hp2
NA18988.hp1
NA18988.hp2
NA18991.hp2
NA18995.hp1
NA19001.hp2
NA19066.hp2
NA19072.hp2
NA19077.hp1
NA19077.hp2
NA19078.hp1
 missense_variant MODERATE c.272T>C
c.272T>C
 p.Leu91Pro
p.Leu91Pro
 CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 3/3 357/784 272/282 91/93 chr17 36195296
chr17:36195375 A
A
 G
G
 1 a0003
a0003
 1 HG01346.hp2
HG01346.hp2
 missense_variant&splice_region_variant MODERATE c.193T>C
c.193T>C
 p.Phe65Leu
p.Phe65Leu
 CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 3/3 278/784 193/282 65/93 chr17 36195375

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr17:36195866 T
T
 C
C
 3 a0001c0002
a0002c0003
a0003c0005
a0001c0002
a0002c0003
a0003c0005
 54 HG00609.hp1
HG00735.hp2
HG01069.hp2
others(51): Show 
HG00609.hp1
HG00735.hp2
HG01069.hp2
HG01071.hp1
HG01169.hp2
HG01243.hp2
HG01346.hp2
HG01358.hp1
HG01516.hp2
HG01517.hp2
HG01884.hp2
HG01934.hp2
HG02273.hp1
HG02293.hp2
HG02523.hp1
HG02523.hp2
HG02683.hp2
HG02698.hp2
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03486.hp2
HG03704.hp2
HG03831.hp1
HG04115.hp2
NA18906.hp1
NA18943.hp2
NA18944.hp1
NA18948.hp1
NA18948.hp2
NA18951.hp2
NA18952.hp2
NA18961.hp1
NA18965.hp2
NA18971.hp2
NA18976.hp1
NA18978.hp1
NA18984.hp2
NA18988.hp2
NA18990.hp1
NA18991.hp1
NA18991.hp2
NA18992.hp1
NA19001.hp2
NA19012.hp1
NA19056.hp2
NA19062.hp1
NA19064.hp1
NA19066.hp2
NA19067.hp1
NA19072.hp1
NA19077.hp1
NA19078.hp2
NA19080.hp2
 synonymous_variant LOW c.123A>G
c.123A>G
 p.Arg41Arg
p.Arg41Arg
 CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 2/3 208/784 123/282 41/93 chr17 36195866

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr17:36195005 T
T
 C
C
 2 a0001c0001t0003
a0001c0002t0003
a0001c0001t0003
a0001c0002t0003
 16 HG00609.hp2
HG01123.hp2
HG01243.hp1
others(13): Show 
HG00609.hp2
HG01123.hp2
HG01243.hp1
HG01496.hp2
HG01981.hp2
HG02135.hp2
HG03704.hp1
HG03704.hp2
NA18962.hp1
NA18963.hp2
NA18978.hp2
NA18984.hp1
NA18992.hp2
NA19012.hp2
NA19056.hp1
NA19062.hp2
 3_prime_UTR_variant MODIFIER c.*281A>G
c.*281A>G
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 3/3 281 chr17 36195005
chr17:36195196 G
G
 A
A
 6 a0001c0001t0002
a0001c0001t0003
a0001c0001t0004
others(3): Show 
a0001c0001t0002
a0001c0001t0003
a0001c0001t0004
a0001c0001t0006
a0001c0002t0002
a0001c0002t0003
 87 HG00280.hp1
HG00609.hp1
HG00609.hp2
others(84): Show 
HG00280.hp1
HG00609.hp1
HG00609.hp2
HG00642.hp1
HG01071.hp2
HG01074.hp1
HG01074.hp2
HG01123.hp1
HG01123.hp2
HG01243.hp1
HG01255.hp2
HG01358.hp1
HG01358.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01884.hp2
HG01981.hp2
HG02027.hp1
HG02056.hp1
HG02056.hp2
HG02071.hp1
HG02135.hp1
HG02135.hp2
HG02155.hp2
HG02280.hp1
HG02280.hp2
HG02523.hp1
HG02683.hp1
HG02683.hp2
HG02698.hp2
HG02809.hp1
HG02809.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03486.hp1
HG03688.hp1
HG03704.hp1
HG03704.hp2
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04204.hp1
NA18906.hp2
NA18944.hp1
NA18944.hp2
NA18948.hp1
NA18948.hp2
NA18951.hp2
NA18962.hp1
NA18963.hp1
NA18963.hp2
NA18971.hp1
NA18971.hp2
NA18976.hp1
NA18978.hp1
NA18978.hp2
NA18984.hp1
NA18984.hp2
NA18990.hp1
NA18991.hp1
NA18992.hp1
NA18992.hp2
NA19012.hp1
NA19012.hp2
NA19056.hp1
NA19056.hp2
NA19062.hp1
NA19062.hp2
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19067.hp2
NA19072.hp1
NA19078.hp2
NA19080.hp1
NA19080.hp2
NA20905.hp1
NA20905.hp2
 3_prime_UTR_variant MODIFIER c.*90C>T
c.*90C>T
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 3/3 90 chr17 36195196
chr17:36195269 C
C
 T
T
 1 a0001c0001t0006
a0001c0001t0006
 1 HG03486.hp1
HG03486.hp1
 3_prime_UTR_variant MODIFIER c.*17G>A
c.*17G>A
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 3/3 17 chr17 36195269
chr17:36196750 C
C
 T
T
 2 a0001c0001t0004
a0002c0003t0005
a0001c0001t0004
a0002c0003t0005
 7 HG01243.hp2
HG01361.hp1
HG02280.hp1
others(4): Show 
HG01243.hp2
HG01361.hp1
HG02280.hp1
HG02809.hp1
HG02809.hp2
HG04184.hp1
NA18944.hp2
 5_prime_UTR_variant MODIFIER c.-77G>A
c.-77G>A
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 1/3 77 chr17 36196750

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr17:36195406 TGGGGAAT
others(6): Show 
TGGGGAATCCAGCC
 T
T
 1 a0002c0004t0001g0006
a0002c0004t0001g0006
 11 HG00423.hp1
HG00423.hp2
HG02083.hp1
others(8): Show 
HG00423.hp1
HG00423.hp2
HG02083.hp1
HG02155.hp1
HG03688.hp2
HG03834.hp1
NA18951.hp1
NA18962.hp2
NA18995.hp1
NA19072.hp2
NA19078.hp1
 intron_variant MODIFIER c.192-43_192-31delGG
others(11): Show 
c.192-43_192-31delGGCTGGATTCCCC
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 2/2 chr17 36195406
chr17:36195550 G
G
 T
T
 1 a0001c0002t0002g0021
a0001c0002t0002g0021
 1 NA18992.hp1
NA18992.hp1
 intron_variant MODIFIER c.192-174C>A
c.192-174C>A
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 2/2 chr17 36195550
chr17:36195587 C
C
 T
T
 21 a0001c0001t0001g0016
a0001c0001t0001g0024
a0001c0001t0002g0001
others(18): Show 
a0001c0001t0001g0016
a0001c0001t0001g0024
a0001c0001t0002g0001
a0001c0001t0002g0013
a0001c0001t0002g0017
a0001c0001t0002g0023
a0001c0001t0002g0026
a0001c0001t0003g0004
a0001c0001t0004g0008
a0001c0001t0006g0015
a0001c0002t0001g0012
a0001c0002t0002g0002
a0001c0002t0002g0018
a0001c0002t0002g0021
a0001c0002t0002g0025
a0001c0002t0003g0022
a0002c0003t0001g0003
a0002c0003t0001g0020
a0002c0003t0005g0014
a0002c0004t0001g0006
a0003c0005t0001g0019
 118 HG00280.hp1
HG00423.hp1
HG00423.hp2
others(115): Show 
HG00280.hp1
HG00423.hp1
HG00423.hp2
HG00609.hp1
HG00609.hp2
HG00642.hp1
HG00735.hp2
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01074.hp2
HG01123.hp1
HG01123.hp2
HG01169.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp2
HG01346.hp2
HG01358.hp1
HG01358.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp2
HG01516.hp1
HG01517.hp1
HG01884.hp1
HG01884.hp2
HG01934.hp2
HG01981.hp2
HG02027.hp1
HG02056.hp1
HG02056.hp2
HG02071.hp1
HG02083.hp1
HG02135.hp1
HG02135.hp2
HG02155.hp1
HG02155.hp2
HG02273.hp1
HG02280.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp2
HG02523.hp1
HG02523.hp2
HG02683.hp1
HG02809.hp1
HG02809.hp2
HG03239.hp1
HG03239.hp2
HG03453.hp1
HG03453.hp2
HG03486.hp1
HG03486.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03704.hp2
HG03831.hp1
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04184.hp1
HG04184.hp2
HG04204.hp1
NA18906.hp1
NA18906.hp2
NA18943.hp2
NA18944.hp1
NA18944.hp2
NA18948.hp1
NA18948.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp2
NA18961.hp1
NA18962.hp1
NA18962.hp2
NA18963.hp1
NA18963.hp2
NA18965.hp2
NA18971.hp1
NA18971.hp2
NA18976.hp1
NA18978.hp1
NA18978.hp2
NA18984.hp1
NA18984.hp2
NA18988.hp2
NA18990.hp1
NA18991.hp1
NA18991.hp2
NA18992.hp1
NA18992.hp2
NA18995.hp1
NA19001.hp2
NA19012.hp1
NA19012.hp2
NA19056.hp1
NA19056.hp2
NA19062.hp1
NA19062.hp2
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19066.hp2
NA19067.hp1
NA19067.hp2
NA19072.hp1
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19078.hp2
NA19080.hp1
NA19080.hp2
NA20905.hp1
NA20905.hp2
 intron_variant MODIFIER c.191+211G>A
c.191+211G>A
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 2/2 chr17 36195587
chr17:36195601 C
C
 T
T
 1 a0002c0004t0001g0006
a0002c0004t0001g0006
 11 HG00423.hp1
HG00423.hp2
HG02083.hp1
others(8): Show 
HG00423.hp1
HG00423.hp2
HG02083.hp1
HG02155.hp1
HG03688.hp2
HG03834.hp1
NA18951.hp1
NA18962.hp2
NA18995.hp1
NA19072.hp2
NA19078.hp1
 intron_variant MODIFIER c.191+197G>A
c.191+197G>A
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 2/2 chr17 36195601
chr17:36195757 T
T
 A
A
 1 a0001c0001t0001g0024
a0001c0001t0001g0024
 1 HG01884.hp1
HG01884.hp1
 intron_variant MODIFIER c.191+41A>T
c.191+41A>T
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 2/2 chr17 36195757
chr17:36195939 G
G
 A
A
 2 a0001c0001t0001g0007
a0002c0003t0001g0020
a0001c0001t0001g0007
a0002c0003t0001g0020
 11 HG00642.hp2
HG00735.hp1
HG01069.hp1
others(8): Show 
HG00642.hp2
HG00735.hp1
HG01069.hp1
HG01169.hp1
HG01255.hp1
HG01346.hp1
HG01496.hp1
HG01934.hp1
HG01975.hp1
HG02273.hp2
HG02293.hp2
 intron_variant MODIFIER c.77-27C>T
c.77-27C>T
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 1/2 chr17 36195939
chr17:36195991 A
A
 C
C
 4 a0001c0002t0002g0002
a0001c0002t0002g0021
a0001c0002t0002g0025
others(1): Show 
a0001c0002t0002g0002
a0001c0002t0002g0021
a0001c0002t0002g0025
a0001c0002t0003g0022
 25 HG00609.hp1
HG01358.hp1
HG01884.hp2
others(22): Show 
HG00609.hp1
HG01358.hp1
HG01884.hp2
HG02523.hp1
HG03239.hp2
HG03704.hp2
NA18944.hp1
NA18948.hp1
NA18948.hp2
NA18951.hp2
NA18971.hp2
NA18976.hp1
NA18978.hp1
NA18984.hp2
NA18990.hp1
NA18991.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19062.hp1
NA19064.hp1
NA19067.hp1
NA19072.hp1
NA19078.hp2
NA19080.hp2
 intron_variant MODIFIER c.77-79T>G
c.77-79T>G
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 1/2 chr17 36195991
chr17:36196164 T
T
 G
G
 1 a0002c0004t0001g0006
a0002c0004t0001g0006
 11 HG00423.hp1
HG00423.hp2
HG02083.hp1
others(8): Show 
HG00423.hp1
HG00423.hp2
HG02083.hp1
HG02155.hp1
HG03688.hp2
HG03834.hp1
NA18951.hp1
NA18962.hp2
NA18995.hp1
NA19072.hp2
NA19078.hp1
 intron_variant MODIFIER c.77-252A>C
c.77-252A>C
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 1/2 chr17 36196164
chr17:36196225 T
T
 C
C
 1 a0001c0002t0002g0025
a0001c0002t0002g0025
 1 HG03239.hp2
HG03239.hp2
 intron_variant MODIFIER c.77-313A>G
c.77-313A>G
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 1/2 chr17 36196225
chr17:36196280 G
G
 C
C
 10 a0001c0001t0001g0011
a0001c0001t0002g0001
a0001c0001t0002g0013
others(7): Show 
a0001c0001t0001g0011
a0001c0001t0002g0001
a0001c0001t0002g0013
a0001c0001t0003g0004
a0001c0001t0004g0008
a0001c0002t0001g0012
a0002c0003t0001g0003
a0002c0003t0001g0020
a0002c0003t0005g0014
a0003c0005t0001g0019
 80 HG00280.hp1
HG00609.hp2
HG00642.hp1
others(77): Show 
HG00280.hp1
HG00609.hp2
HG00642.hp1
HG00735.hp2
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01074.hp2
HG01123.hp1
HG01123.hp2
HG01169.hp2
HG01243.hp1
HG01243.hp2
HG01255.hp2
HG01346.hp2
HG01358.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp2
HG01516.hp1
HG01517.hp1
HG01934.hp2
HG01981.hp2
HG02027.hp1
HG02056.hp1
HG02056.hp2
HG02071.hp1
HG02135.hp1
HG02135.hp2
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02273.hp1
HG02280.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp1
HG02523.hp2
HG02809.hp1
HG02809.hp2
HG03239.hp1
HG03453.hp2
HG03486.hp2
HG03540.hp1
HG03540.hp2
HG03688.hp1
HG03704.hp1
HG03831.hp1
HG03834.hp2
HG04115.hp1
HG04184.hp1
HG04204.hp1
NA18906.hp1
NA18906.hp2
NA18943.hp2
NA18944.hp2
NA18952.hp2
NA18961.hp1
NA18962.hp1
NA18963.hp2
NA18965.hp2
NA18971.hp1
NA18978.hp2
NA18984.hp1
NA18988.hp2
NA18991.hp2
NA18992.hp2
NA19001.hp2
NA19012.hp2
NA19056.hp1
NA19062.hp2
NA19064.hp2
NA19066.hp1
NA19066.hp2
NA19067.hp2
NA19077.hp1
NA19080.hp1
NA20905.hp1
NA20905.hp2
 intron_variant MODIFIER c.76+318C>G
c.76+318C>G
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 1/2 chr17 36196280
chr17:36196527 A
A
 G
G
 12 a0001c0001t0001g0016
a0001c0001t0002g0001
a0001c0001t0002g0017
others(9): Show 
a0001c0001t0001g0016
a0001c0001t0002g0001
a0001c0001t0002g0017
a0001c0001t0003g0004
a0001c0001t0006g0015
a0001c0002t0001g0012
a0001c0002t0002g0009
a0001c0002t0002g0018
a0002c0003t0001g0003
a0002c0003t0001g0020
a0002c0004t0001g0006
a0003c0005t0001g0019
 86 HG00280.hp1
HG00423.hp1
HG00423.hp2
others(83): Show 
HG00280.hp1
HG00423.hp1
HG00423.hp2
HG00609.hp2
HG00642.hp1
HG00735.hp2
HG01069.hp2
HG01071.hp1
HG01071.hp2
HG01074.hp1
HG01074.hp2
HG01123.hp1
HG01123.hp2
HG01169.hp2
HG01243.hp1
HG01255.hp2
HG01346.hp2
HG01358.hp2
HG01361.hp2
HG01496.hp2
HG01516.hp1
HG01516.hp2
HG01517.hp1
HG01517.hp2
HG01934.hp2
HG01981.hp2
HG02027.hp1
HG02056.hp1
HG02056.hp2
HG02071.hp1
HG02083.hp1
HG02135.hp1
HG02135.hp2
HG02155.hp1
HG02155.hp2
HG02273.hp1
HG02293.hp2
HG02486.hp2
HG02523.hp2
HG02683.hp1
HG02683.hp2
HG02698.hp2
HG03239.hp1
HG03453.hp1
HG03453.hp2
HG03486.hp1
HG03486.hp2
HG03688.hp1
HG03688.hp2
HG03704.hp1
HG03831.hp1
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04204.hp1
NA18906.hp1
NA18943.hp2
NA18951.hp1
NA18952.hp2
NA18961.hp1
NA18962.hp1
NA18962.hp2
NA18963.hp2
NA18965.hp2
NA18971.hp1
NA18978.hp2
NA18984.hp1
NA18988.hp2
NA18991.hp2
NA18992.hp2
NA18995.hp1
NA19001.hp2
NA19012.hp2
NA19056.hp1
NA19062.hp2
NA19064.hp2
NA19066.hp1
NA19066.hp2
NA19067.hp2
NA19072.hp2
NA19077.hp1
NA19078.hp1
NA19080.hp1
NA20905.hp1
NA20905.hp2
 intron_variant MODIFIER c.76+71T>C
c.76+71T>C
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 1/2 chr17 36196527
chr17:36196546 G
G
 A
A
 1 a0001c0001t0002g0026
a0001c0001t0002g0026
 1 HG04184.hp2
HG04184.hp2
 intron_variant MODIFIER c.76+52C>T
c.76+52C>T
CCL3L3 ENSG00000276085.1 transcript ENST00000619989.1 protein_coding 1/2 chr17 36196546

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

IGV Connection Help

IGV must be running on your computer before clicking the button.

If your browser shows the "cannot open the page" error, launch IGV and allow access via port 60151:

  1. Open IGV on your computer
  2. In IGV's menu bar: View → Preferences…
  3. Click on the "Advanced" tab
  4. Check "Enable port"
  5. Set the port number to 60151
  6. Click OK to save

For more details, please refer to Information → FAQ.