view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SOX13_chr1_204068115_204132743 | 204097693 | CA | C | intron_variant | MODIFIER | HG01993.hp1 HG02257.hp2 HG02615.hp1 others(5): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0078 a0001c0001t0001g0104 a0001c0001t0001g0117 others(5): Show |
8 | 364 | 0.0220 | -1 | c.-1- others(9): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204099424 | CT | C | intron_variant | MODIFIER | HG00323.hp2 HG01243.hp2 HG01975.hp2 others(27): Show |
a0001a0002a0009 | a0001c0001a0002c0002a0009c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0222 others(27): Show |
30 | 364 | 0.0824 | -1 | c.-1- others(9): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204103644 | GC | G | intron_variant | MODIFIER | HG02071.hp2 HG03017.hp1 HG03491.hp2 others(6): Show |
a0001a0009 | a0001c0001a0009c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(1): Show | a0001c0001t0001g0299 a0001c0001t0001g0321 a0001c0001t0001g0349 others(6): Show |
9 | 364 | 0.0247 | -1 | c.-1- others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | chr1 | TogoVar | |||||||
SOX13_chr1_204068115_204132743 | 204105413 | CT | C | intron_variant | MODIFIER | HG00280.hp2 HG00558.hp1 HG00609.hp1 others(77): Show |
a0001a0002a0007 | a0001c0001a0002c0002a0007c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0050 a0001c0001t0001g0054 a0001c0001t0001g0088 others(75): Show |
80 | 364 | 0.2198 | -1 | c.-1- others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204106517 | AT | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp1 others(143): Show |
a0001a0003a0004others(2): Show | a0001c0001a0001c0010a0003c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0007 a0001c0001t0001g0046 a0001c0001t0001g0058 others(141): Show |
146 | 364 | 0.4011 | -1 | c.-1- others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204110902 | CA | C | intron_variant | MODIFIER | HG01109.hp1 HG02109.hp2 HG02145.hp1 others(16): Show |
a0001a0003a0004 | a0001c0001a0003c0003a0004c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0068 a0001c0001t0001g0284 a0001c0001t0002g0129 others(16): Show |
19 | 364 | 0.0522 | -1 | c.-1- others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204115475 | GT | G | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp2 HG00423.hp1 others(89): Show |
a0001a0008 | a0001c0001a0001c0010a0008c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0007 a0001c0001t0001g0046 a0001c0001t0001g0058 others(88): Show |
92 | 364 | 0.2528 | -1 | c.418 others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 4/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204115492 | TA | T | intron_variant | MODIFIER | HG01074.hp2 HG01109.hp1 HG01168.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0104 a0001c0001t0001g0310 a0001c0001t0003g0067 others(6): Show |
9 | 364 | 0.0247 | -1 | c.418 others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 4/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204115657 | CT | C | intron_variant | MODIFIER | HG00323.hp2 HG00642.hp2 HG01074.hp2 others(17): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0273 others(17): Show |
20 | 364 | 0.0550 | -1 | c.419 others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 4/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204118286 | CA | C | intron_variant | MODIFIER | HG02647.hp1 HG02886.hp1 HG02896.hp1 others(4): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(3): Show | a0001c0001t0001g0120 a0001c0001t0001g0344 a0001c0001t0003g0236 others(4): Show |
7 | 364 | 0.0192 | -1 | c.775 others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 7/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204120982 | CT | C | intron_variant | MODIFIER | HG01167.hp1 HG01167.hp2 HG02109.hp2 others(4): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(4): Show | a0001c0001t0001g0132 a0001c0001t0003g0258 a0001c0001t0004g0190 others(4): Show |
7 | 364 | 0.0192 | -1 | c.776 others(8): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 7/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SOX13_chr1_204068115_204132743 | 204122619 | CA | C | intron_variant | MODIFIER | HG01243.hp2 HG02572.hp1 HG02818.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0006 | a0001c0001t0001g0051 a0001c0001t0005g0047 a0001c0001t0005g0052 others(5): Show |
8 | 364 | 0.0220 | -1 | c.102 others(9): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 9/13 | chr1 | TogoVar | |||||||
SOX13_chr1_204068115_204132743 | 204128374 | CG | C | downstream_gene_variant | MODIFIER | HG02258.hp1 HG02280.hp2 HG02647.hp1 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0005a0002c0002t0006 | a0002c0002t0005g0307 a0002c0002t0006g0033 a0002c0002t0006g0034 others(2): Show |
5 | 364 | 0.0137 | -1 | c.*22 others(6): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 632 | chr1 | TogoVar | |||||||
SOX13_chr1_204068115_204132743 | 204132332 | AG | A | downstream_gene_variant | MODIFIER | HG02451.hp2 HG02572.hp2 HG02723.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0284 a0001c0001t0004g0190 a0001c0001t0004g0293 |
3 | 364 | 0.0082 | -1 | c.*61 others(6): Show |
SOX13 | ENSG00000143842.15 | transcript | ENST00000367204.6 | protein_coding | 4590 | chr1 | TogoVar | |||||||
SOX14_chr3_137759315_137771334 | 137767552 | TA | T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(358): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(16): Show |
361 | 398 | 0.9070 | -1 | c.*20 others(6): Show |
SOX14 | ENSG00000168875.3 | transcript | ENST00000306087.3 | protein_coding | 1219 | chr3 | TogoVar | |||||||
SOX15_chr17_7583178_7595094 | 7586439 | TA | T | downstream_gene_variant | MODIFIER | HG01167.hp1 HG01255.hp2 HG01257.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(2): Show |
9 | 418 | 0.0215 | -1 | c.*19 others(6): Show |
SOX15 | ENSG00000129194.8 | transcript | ENST00000250055.3 | protein_coding | 1738 | chr17 | TogoVar | |||||||
SOX17_chr8_54452935_54465892 | 54453017 | GA | G | upstream_gene_variant | MODIFIER | HG01243.hp1 HG02055.hp1 HG02109.hp1 others(8): Show |
a0001 | a0001c0001a0001c0010 | a0001c0001t0001a0001c0010t0001 | a0001c0001t0001g0004 a0001c0001t0001g0013 a0001c0001t0001g0016 others(1): Show |
11 | 422 | 0.0261 | -1 | c.-51 others(6): Show |
SOX17 | ENSG00000164736.6 | transcript | ENST00000297316.5 | protein_coding | 4917 | chr8 | TogoVar | |||||||
SOX17_chr8_54452935_54465892 | 54456005 | CA | C | upstream_gene_variant | MODIFIER | HG00544.hp1 HG00558.hp2 HG00642.hp1 others(103): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(5): Show |
106 | 422 | 0.2512 | -1 | c.-21 others(6): Show |
SOX17 | ENSG00000164736.6 | transcript | ENST00000297316.5 | protein_coding | 1929 | chr8 | TogoVar | |||||||
SOX17_chr8_54452935_54465892 | 54456137 | AT | A | upstream_gene_variant | MODIFIER | HG02055.hp2 HG02074.hp1 HG02129.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 15 | 422 | 0.0356 | -1 | c.-20 others(6): Show |
SOX17 | ENSG00000164736.6 | transcript | ENST00000297316.5 | protein_coding | 1797 | chr8 | TogoVar | |||||||
SOX17_chr8_54452935_54465892 | 54456956 | CT | C | upstream_gene_variant | MODIFIER | HG00408.hp2 HG00423.hp2 HG00438.hp1 others(130): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0008others(4): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(8): Show | a0001c0001t0002g0002 a0001c0001t0002g0005 a0001c0001t0002g0008 others(11): Show |
133 | 422 | 0.3152 | -1 | c.-11 others(6): Show |
SOX17 | ENSG00000164736.6 | transcript | ENST00000297316.5 | protein_coding | 978 | chr8 | TogoVar | |||||||
SOX17_chr8_54452935_54465892 | 54460918 | GT | G | downstream_gene_variant | MODIFIER | HG00423.hp2 HG00673.hp1 HG01167.hp1 others(6): Show |
a0001a0004a0005 | a0001c0001a0004c0005a0005c0009 | a0001c0001t0001a0001c0001t0002a0004c0005t0001others(1): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0002g0002 others(2): Show |
9 | 422 | 0.0213 | -1 | c.*92 others(5): Show |
SOX17 | ENSG00000164736.6 | transcript | ENST00000297316.5 | protein_coding | 27 | chr8 | TogoVar | |||||||
SOX18_chr20_64042582_64054639 | 64042832 | CG | C | downstream_gene_variant | MODIFIER | HG00738.hp2 HG02451.hp1 HG02622.hp1 others(18): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 others(5): Show |
21 | 352 | 0.0597 | -1 | c.*53 others(6): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4749 | chr20 | TogoVar | |||||||
SOX18_chr20_64042582_64054639 | 64042874 | CG | C | downstream_gene_variant | MODIFIER | HG01109.hp1 HG01168.hp1 HG01168.hp2 others(20): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0001 | a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0002g0004 others(1): Show |
23 | 352 | 0.0653 | -1 | c.*52 others(6): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4707 | chr20 | TogoVar | |||||||
SOX18_chr20_64042582_64054639 | 64042895 | CG | C | downstream_gene_variant | MODIFIER | HG00733.hp2 HG00738.hp2 HG01106.hp1 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(3): Show |
20 | 352 | 0.0568 | -1 | c.*52 others(6): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4686 | chr20 | TogoVar | |||||||
SOX18_chr20_64042582_64054639 | 64042916 | CG | C | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(95): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(15): Show |
98 | 352 | 0.2784 | -1 | c.*52 others(6): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4665 | chr20 | TogoVar | |||||||
SOX18_chr20_64042582_64054639 | 64043408 | CA | C | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00738.hp1 HG00738.hp2 others(41): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(1): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(5): Show |
44 | 352 | 0.1250 | -1 | c.*47 others(6): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 4173 | chr20 | TogoVar | |||||||
SOX18_chr20_64042582_64054639 | 64051335 | AG | A | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00642.hp1 HG00738.hp1 others(37): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 others(8): Show |
40 | 352 | 0.1136 | -1 | c.-18 others(6): Show |
SOX18 | ENSG00000203883.7 | transcript | ENST00000340356.9 | protein_coding | 1697 | chr20 | TogoVar | |||||||
SOX1_chr13_112062149_112076706 | 112069445 | AT | A | 3_prime_UTR_variant | MODIFIER | HG00673.hp2 HG00733.hp2 HG00738.hp2 others(56): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0007a0001c0008others(5): Show | a0001c0001t0008a0001c0001t0013a0001c0001t0024others(15): Show | a0001c0001t0008g0000 a0001c0001t0013g0000 a0001c0001t0024g0000 others(15): Show |
59 | 388 | 0.1521 | -1 | c.*62 others(5): Show |
SOX1 | ENSG00000182968.5 | transcript | ENST00000330949.3 | protein_coding | 1/1 | 622 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SOX1_chr13_112062149_112076706 | 112069766 | AT | A | 3_prime_UTR_variant | MODIFIER | HG00673.hp2 HG00733.hp2 HG00738.hp2 others(54): Show |
a0001a0002a0004 | a0001c0001a0001c0007a0001c0008others(5): Show | a0001c0001t0008a0001c0001t0013a0001c0007t0008others(13): Show | a0001c0001t0008g0000 a0001c0001t0013g0000 a0001c0007t0008g0000 others(13): Show |
57 | 388 | 0.1469 | -1 | c.*93 others(5): Show |
SOX1 | ENSG00000182968.5 | transcript | ENST00000330949.3 | protein_coding | 1/1 | 937 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SOX1_chr13_112062149_112076706 | 112070866 | CT | C | 3_prime_UTR_variant | MODIFIER | HG00741.hp1 HG01192.hp1 HG02109.hp2 others(16): Show |
a0001a0004 | a0001c0001a0001c0007a0004c0009 | a0001c0001t0008a0001c0001t0015a0001c0001t0017others(4): Show | a0001c0001t0008g0000 a0001c0001t0015g0000 a0001c0001t0017g0000 others(4): Show |
19 | 388 | 0.0490 | -1 | c.*20 others(6): Show |
SOX1 | ENSG00000182968.5 | transcript | ENST00000330949.3 | protein_coding | 1/1 | 2033 | chr13 | TogoVar | ||||||
SOX1_chr13_112062149_112076706 | 112071741 | AC | A | downstream_gene_variant | MODIFIER | NA18942.hp1 NA18952.hp2 NA18954.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 4 | 388 | 0.0103 | -1 | c.*29 others(6): Show |
SOX1 | ENSG00000182968.5 | transcript | ENST00000330949.3 | protein_coding | 36 | chr13 | TogoVar | |||||||
SOX1_chr13_112062149_112076706 | 112076465 | AT | A | downstream_gene_variant | MODIFIER | HG02109.hp2 HG02280.hp1 HG02572.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008a0001c0001t0013others(1): Show | a0001c0001t0001g0000 a0001c0001t0008g0000 a0001c0001t0013g0000 others(1): Show |
11 | 388 | 0.0284 | -1 | c.*76 others(6): Show |
SOX1 | ENSG00000182968.5 | transcript | ENST00000330949.3 | protein_coding | 4760 | chr13 | TogoVar | |||||||
SOX21_chr13_94704622_94717545 | 94704697 | GA | G | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00323.hp2 others(243): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0009a0001c0001t0010others(8): Show | a0001c0001t0001g0000 a0001c0001t0009g0000 a0001c0001t0010g0000 others(8): Show |
246 | 436 | 0.5642 | -1 | c.*65 others(6): Show |
SOX21 | ENSG00000125285.6 | transcript | ENST00000376945.4 | protein_coding | 4924 | chr13 | TogoVar | |||||||
SOX21_chr13_94704622_94717545 | 94705293 | GC | G | downstream_gene_variant | MODIFIER | HG01069.hp1 HG01071.hp1 HG01081.hp1 others(49): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(5): Show | a0001c0001t0001g0000 a0001c0002t0001g0000 a0001c0002t0002g0000 others(5): Show |
52 | 436 | 0.1193 | -1 | c.*59 others(6): Show |
SOX21 | ENSG00000125285.6 | transcript | ENST00000376945.4 | protein_coding | 4328 | chr13 | TogoVar | |||||||
SOX21_chr13_94704622_94717545 | 94707192 | CA | C | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(284): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0009others(10): Show | a0001c0001t0001g0000 a0001c0001t0005g0000 a0001c0001t0009g0000 others(10): Show |
287 | 436 | 0.6583 | -1 | c.*40 others(6): Show |
SOX21 | ENSG00000125285.6 | transcript | ENST00000376945.4 | protein_coding | 2429 | chr13 | TogoVar | |||||||
SOX21_chr13_94704622_94717545 | 94708957 | AT | A | downstream_gene_variant | MODIFIER | HG00323.hp2 HG01169.hp2 HG01346.hp2 others(44): Show |
a0001 | a0001c0002a0001c0003a0001c0004others(1): Show | a0001c0002t0001a0001c0002t0002a0001c0003t0001others(3): Show | a0001c0002t0001g0000 a0001c0002t0002g0000 a0001c0003t0001g0000 others(3): Show |
47 | 436 | 0.1078 | -1 | c.*22 others(6): Show |
SOX21 | ENSG00000125285.6 | transcript | ENST00000376945.4 | protein_coding | 664 | chr13 | TogoVar | |||||||
SOX21_chr13_94704622_94717545 | 94714641 | CA | C | upstream_gene_variant | MODIFIER | NA18998.hp2 NA19030.hp1 NA19086.hp1 others(1): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0002a0001c0003t0001 | a0001c0002t0002g0000 a0001c0003t0001g0000 |
4 | 436 | 0.0092 | -1 | c.-25 others(6): Show |
SOX21 | ENSG00000125285.6 | transcript | ENST00000376945.4 | protein_coding | 2097 | chr13 | TogoVar | |||||||
SOX2_chr3_181706925_181719436 | 181707733 | GA | G | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(116): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(9): Show |
119 | 412 | 0.2888 | -1 | c.-46 others(6): Show |
SOX2 | ENSG00000181449.4 | transcript | ENST00000325404.3 | protein_coding | 4191 | chr3 | TogoVar | |||||||
SOX2_chr3_181706925_181719436 | 181716981 | AC | A | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp2 others(178): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(7): Show |
181 | 412 | 0.4393 | -1 | c.*36 others(6): Show |
SOX2 | ENSG00000181449.4 | transcript | ENST00000325404.3 | protein_coding | 2546 | chr3 | TogoVar | |||||||
SOX2_chr3_181706925_181719436 | 181718368 | GA | G | downstream_gene_variant | MODIFIER | HG00280.hp1 HG01123.hp2 HG01175.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0008 | a0001c0001t0002g0000 a0001c0001t0008g0000 |
8 | 412 | 0.0194 | -1 | c.*50 others(6): Show |
SOX2 | ENSG00000181449.4 | transcript | ENST00000325404.3 | protein_coding | 3933 | chr3 | TogoVar | |||||||
SOX2_chr3_181706925_181719436 | 181718485 | GT | G | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp2 others(187): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(6): Show |
190 | 412 | 0.4612 | -1 | c.*51 others(6): Show |
SOX2 | ENSG00000181449.4 | transcript | ENST00000325404.3 | protein_coding | 4050 | chr3 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157622757 | GA | G | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(213): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0002a0001c0006others(15): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0015 others(160): Show |
216 | 394 | 0.5482 | -1 | c.*35 others(6): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 2921 | chr5 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157626263 | CT | C | 3_prime_UTR_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01109.hp2 others(5): Show |
a0001a0008a0009 | a0001c0001a0008c0013a0009c0027 | a0001c0001t0004a0001c0001t0013a0008c0013t0004others(1): Show | a0001c0001t0004g0260 a0001c0001t0004g0261 a0001c0001t0004g0262 others(4): Show |
8 | 394 | 0.0203 | -1 | c.*76 others(4): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 5/5 | 76 | chr5 | TogoVar | ||||||
SOX30_chr5_157620679_157657438 | 157628643 | CT | C | intron_variant | MODIFIER | HG00408.hp1 HG00544.hp2 HG00597.hp1 others(41): Show |
a0001a0002a0004others(4): Show | a0001c0001a0001c0006a0001c0021others(6): Show | a0001c0001t0001a0001c0006t0001a0001c0021t0001others(6): Show | a0001c0001t0001g0167 a0001c0001t0001g0209 a0001c0006t0001g0057 others(28): Show |
44 | 394 | 0.1117 | -1 | c.188 others(10): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 4/4 | chr5 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157631764 | CA | C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00408.hp2 others(87): Show |
a0001a0003a0004others(5): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0118 a0001c0001t0001g0190 a0001c0001t0001g0198 others(58): Show |
90 | 394 | 0.2284 | -1 | c.188 others(10): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 4/4 | chr5 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157632047 | TA | T | intron_variant | MODIFIER | HG00408.hp1 HG00544.hp2 HG00597.hp2 others(47): Show |
a0001a0002a0010others(2): Show | a0001c0001a0001c0006a0001c0012others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0010others(6): Show | a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0196 others(34): Show |
50 | 394 | 0.1269 | -1 | c.188 others(10): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 4/4 | chr5 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157637133 | CA | C | intron_variant | MODIFIER | HG00323.hp1 HG00597.hp1 HG00639.hp2 others(20): Show |
a0001 | a0001c0001a0001c0003a0001c0012others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(2): Show | a0001c0001t0001g0163 a0001c0001t0001g0173 a0001c0001t0001g0183 others(15): Show |
23 | 394 | 0.0584 | -1 | c.188 others(10): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 4/4 | chr5 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157642315 | CA | C | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(157): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0002a0001c0006others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0015 others(109): Show |
160 | 394 | 0.4061 | -1 | c.138 others(10): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 3/4 | chr5 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157642349 | GC | G | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG02723.hp2 |
a0008a0009 | a0008c0013a0009c0027 | a0008c0013t0004a0009c0027t0004 | a0008c0013t0004g0044 a0009c0027t0004g0270 |
3 | 394 | 0.0076 | -1 | c.138 others(10): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 3/4 | chr5 | TogoVar | |||||||
SOX30_chr5_157620679_157657438 | 157647061 | AT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(198): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0002a0001c0011others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(23): Show | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0015 others(144): Show |
201 | 394 | 0.5102 | -1 | c.120 others(9): Show |
SOX30 | ENSG00000039600.11 | transcript | ENST00000265007.11 | protein_coding | 2/4 | chr5 | TogoVar |