Joint Open Genome and Omics Platform (JoGo)

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geneid	6656
ensemblid	ENSG00000182968.5
hgncid	11189
symbol	SOX1
name	SRY-box transcription factor 1
refseq_nuc	NM_005986.3
refseq_prot	NP_005977.2
ensembl_nuc	ENST00000330949.3
ensembl_prot	ENSP00000330218.1
mane_status	MANE Select
chr	chr13
start	112067149
end	112071706
strand	+
ver	v1.2
region	chr13:112067149-112071706
region5000	chr13:112062149-112076706
regionname0	SOX1_chr13_112067149_112071706
regionname5000	SOX1_chr13_112062149_112076706

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	391	327	83	56	141	16	29	99	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002	0/0	391	43	10	5	22	0	6	21	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0003	0/0	391	7	0	0	4	0	3	4	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0004	0/0	393	5	2	1	0	0	2	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0005	0/0	389	4	3	0	0	0	1	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0006	0/0	391	1	0	0	0	0	1	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0007	0/0	391	1	0	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	1176	323	81	55	140	16	29	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0002	0/0	1176	34	9	5	14	0	6	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0003	0/0	1176	8	0	0	8	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0004	0/0	1176	7	0	0	4	0	3	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0005	0/0	1170	4	3	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0006	0/0	1182	4	2	0	0	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0007	0/0	1176	2	1	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0008	0/0	1176	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0009	0/0	1182	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0010	0/0	1176	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0011	0/0	1176	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0012	0/0	1176	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
c0013	0/0	1176	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	3383	119	24	21	60	6	8	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0002	1/1	3383	97	5	17	48	9	16	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0003	0/0	3382	26	10	5	9	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0004	0/0	3384	15	6	7	1	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0005	0/0	3383	9	0	0	9	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0006	0/0	3384	9	0	1	7	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0007	0/0	3383	9	8	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0008	0/0	3380	8	8	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0009	0/0	3384	8	0	2	6	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0010	0/0	3383	7	0	0	4	0	3	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0011	0/0	3384	5	0	1	2	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0012	0/0	3384	4	0	0	4	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0013	0/0	3381	4	3	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0014	0/0	3384	4	4	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0015	0/0	3382	3	2	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0016	0/0	3383	3	0	0	3	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0017	0/0	3382	3	3	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0018	0/0	3382	3	3	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0019	0/0	3384	2	0	0	2	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0020	0/0	3382	2	0	0	0	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0021	0/0	3383	2	0	0	0	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0022	0/0	3384	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0023	0/0	3382	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0024	0/0	3382	2	1	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0025	0/0	3383	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0026	0/0	3383	2	0	0	2	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0027	0/0	3384	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0028	0/0	3384	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0029	0/0	3383	2	1	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0030	0/0	3383	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0031	0/0	3383	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0032	0/0	3385	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0033	0/0	3385	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0034	0/0	3385	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0035	0/0	3384	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0036	0/0	3385	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0037	0/0	3384	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0038	0/0	3381	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0039	0/0	3382	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0040	0/0	3382	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0041	0/0	3382	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0042	0/0	3383	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0043	0/0	3383	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0044	0/0	3383	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0045	0/0	3383	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0046	0/0	3383	1	0	0	0	1	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0047	0/0	3383	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0048	0/0	3385	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0049	0/0	3384	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0050	0/0	3384	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0051	0/0	3384	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0052	0/0	3383	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0053	0/0	3382	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0054	0/0	3383	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0055	0/0	3384	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0056	0/0	3383	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0057	0/0	3383	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0058	0/0	3384	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
t0059	0/0	3383	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0000	1/1	388	98	62	168	16	42	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	1176	323	81	55	140	16	29	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0007	0/0	1176	2	1	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0008	0/0	1176	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0012	0/0	1176	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002	0/0	1176	34	9	5	14	0	6	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0003	0/0	1176	8	0	0	8	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0013	0/0	1176	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0003c0004	0/0	1176	7	0	0	4	0	3	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0004c0006	0/0	1182	4	2	0	0	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0004c0009	0/0	1182	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0005c0005	0/0	1170	4	3	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0006c0010	0/0	1176	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0007c0011	0/0	1176	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	4558	117	23	21	59	6	8	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0002	1/1	4558	96	5	17	47	9	16	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0004	0/0	4559	15	6	7	1	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0006	0/0	4559	9	0	1	7	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0007	0/0	4558	9	8	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0008	0/0	4555	7	7	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0009	0/0	4559	8	0	2	6	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0011	0/0	4559	5	0	1	2	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0012	0/0	4559	4	0	0	4	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0013	0/0	4556	3	3	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0014	0/0	4559	4	4	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0015	0/0	4557	3	2	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0016	0/0	4558	3	0	0	3	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0017	0/0	4557	3	3	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0018	0/0	4557	3	3	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0024	0/0	4557	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0025	0/0	4558	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0026	0/0	4558	2	0	0	2	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0027	0/0	4559	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0028	0/0	4559	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0029	0/0	4558	2	1	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0030	0/0	4558	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0031	0/0	4558	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0033	0/0	4560	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0034	0/0	4560	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0035	0/0	4559	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0036	0/0	4560	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0037	0/0	4559	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0042	0/0	4558	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0043	0/0	4558	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0044	0/0	4558	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0045	0/0	4558	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0046	0/0	4558	1	0	0	0	1	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0049	0/0	4559	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0050	0/0	4559	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0051	0/0	4559	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0052	0/0	4558	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0053	0/0	4557	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0054	0/0	4558	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0055	0/0	4559	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0056	0/0	4558	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0057	0/0	4558	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0058	0/0	4559	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0001t0059	0/0	4558	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0007t0008	0/0	4555	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0007t0013	0/0	4556	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0008t0003	0/0	4557	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0001c0012t0002	0/0	4558	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002t0003	0/0	4557	17	8	5	2	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002t0005	0/0	4558	9	0	0	9	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002t0010	0/0	4558	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002t0019	0/0	4559	2	0	0	2	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002t0020	0/0	4557	2	0	0	0	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002t0039	0/0	4557	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002t0041	0/0	4557	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0002t0048	0/0	4560	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0003t0003	0/0	4557	7	0	0	7	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0003t0038	0/0	4556	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0002c0013t0003	0/0	4557	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0003c0004t0010	0/0	4558	6	0	0	4	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0003c0004t0032	0/0	4560	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0004c0006t0021	0/0	4564	2	0	0	0	0	2	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0004c0006t0023	0/0	4563	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0004c0009t0040	0/0	4563	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0005c0005t0001	0/0	4552	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0005c0005t0022	0/0	4553	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0005c0005t0047	0/0	4552	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0006c0010t0024	0/0	4557	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706
a0007c0011t0001	0/0	4558	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	copy fasta	chr13	112062149	112076706

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0000	0/0	117	23	21	59	6	8	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0002g0000	1/1	96	5	17	47	9	16	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0004g0000	0/0	15	6	7	1	0	1	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0006g0000	0/0	9	0	1	7	0	1	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0007g0000	0/0	9	8	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0008g0000	0/0	7	7	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0009g0000	0/0	8	0	2	6	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0011g0000	0/0	5	0	1	2	0	2	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0012g0000	0/0	4	0	0	4	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0013g0000	0/0	3	3	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0014g0000	0/0	4	4	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0015g0000	0/0	3	2	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0016g0000	0/0	3	0	0	3	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0017g0000	0/0	3	3	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0018g0000	0/0	3	3	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0024g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0025g0000	0/0	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0026g0000	0/0	2	0	0	2	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0027g0000	0/0	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0028g0000	0/0	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0029g0000	0/0	2	1	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0030g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0031g0000	0/0	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0033g0000	0/0	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0034g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0035g0000	0/0	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0036g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0037g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0042g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0043g0000	0/0	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0044g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0045g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0046g0000	0/0	1	0	0	0	1	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0049g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0050g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0051g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0052g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0053g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0054g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0055g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0056g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0057g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0058g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0001t0059g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0007t0008g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0007t0013g0000	0/0	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0008t0003g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0001c0012t0002g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0002t0003g0000	0/0	17	8	5	2	0	2	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0002t0005g0000	0/0	9	0	0	9	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0002t0010g0000	0/0	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0002t0019g0000	0/0	2	0	0	2	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0002t0020g0000	0/0	2	0	0	0	0	2	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0002t0039g0000	0/0	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0002t0041g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0002t0048g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0003t0003g0000	0/0	7	0	0	7	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0003t0038g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0002c0013t0003g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0003c0004t0010g0000	0/0	6	0	0	4	0	2	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0003c0004t0032g0000	0/0	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0004c0006t0021g0000	0/0	2	0	0	0	0	2	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0004c0006t0023g0000	0/0	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0004c0009t0040g0000	0/0	1	0	1	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0005c0005t0001g0000	0/0	1	1	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0005c0005t0022g0000	0/0	2	2	0	0	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0005c0005t0047g0000	0/0	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0006c0010t0024g0000	0/0	1	0	0	0	0	1	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
a0007c0011t0001g0000	0/0	1	0	0	1	0	0	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0002	g0000	EUR	GBR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00140	hp2	a0001	c0001	t0002	g0000	EUR	GBR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00280	hp1	a0001	c0001	t0001	g0000	EUR	FIN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00280	hp2	a0001	c0001	t0002	g0000	EUR	FIN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00323	hp1	a0001	c0001	t0001	g0000	EUR	FIN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00323	hp2	a0001	c0001	t0046	g0000	EUR	FIN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00408	hp1	a0001	c0001	t0002	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00408	hp2	a0001	c0001	t0001	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00423	hp1	a0001	c0001	t0002	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00423	hp2	a0001	c0001	t0002	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00544	hp1	a0001	c0001	t0026	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00544	hp2	a0001	c0001	t0002	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00597	hp1	a0001	c0001	t0001	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00597	hp2	a0001	c0001	t0002	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00609	hp1	a0001	c0001	t0002	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00609	hp2	a0001	c0001	t0002	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00639	hp1	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00639	hp2	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00673	hp1	a0001	c0001	t0016	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00673	hp2	a0002	c0002	t0005	g0000	EAS	CHS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00733	hp1	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00733	hp2	a0002	c0002	t0003	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00735	hp1	a0001	c0001	t0011	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00735	hp2	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00738	hp1	a0001	c0001	t0004	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00738	hp2	a0002	c0002	t0003	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00741	hp1	a0001	c0001	t0015	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG00741	hp2	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01070	hp1	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01070	hp2	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01071	hp1	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01071	hp2	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01074	hp1	a0002	c0002	t0003	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01074	hp2	a0001	c0001	t0004	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01081	hp1	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01081	hp2	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01099	hp1	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01099	hp2	a0001	c0001	t0035	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01106	hp1	a0001	c0001	t0004	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01106	hp2	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01109	hp1	a0001	c0001	t0007	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01109	hp2	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01168	hp1	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01168	hp2	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01175	hp1	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01175	hp2	a0001	c0001	t0002	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01192	hp1	a0004	c0009	t0040	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01192	hp2	a0001	c0001	t0001	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01243	hp1	a0001	c0001	t0029	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01243	hp2	a0001	c0007	t0013	g0000	AMR	PUR	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01255	hp1	a0001	c0001	t0004	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01255	hp2	a0001	c0001	t0001	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01256	hp1	a0001	c0001	t0002	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01256	hp2	a0001	c0001	t0001	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01257	hp1	a0001	c0001	t0043	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01257	hp2	a0001	c0001	t0009	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01346	hp1	a0002	c0002	t0003	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01346	hp2	a0001	c0001	t0001	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01358	hp1	a0001	c0001	t0002	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01358	hp2	a0001	c0001	t0001	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01361	hp1	a0001	c0001	t0009	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01361	hp2	a0001	c0001	t0001	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01496	hp1	a0001	c0001	t0004	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01496	hp2	a0001	c0001	t0002	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01515	hp1	a0001	c0001	t0001	g0000	EUR	IBS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01515	hp2	a0001	c0001	t0002	g0000	EUR	IBS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01516	hp1	a0001	c0001	t0002	g0000	EUR	IBS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01516	hp2	a0001	c0001	t0001	g0000	EUR	IBS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01517	hp1	a0001	c0001	t0002	g0000	EUR	IBS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01517	hp2	a0001	c0001	t0001	g0000	EUR	IBS	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01884	hp1	a0001	c0001	t0014	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01884	hp2	a0001	c0001	t0014	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01891	hp1	a0001	c0001	t0044	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01891	hp2	a0001	c0001	t0007	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01934	hp1	a0001	c0001	t0001	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01934	hp2	a0001	c0001	t0002	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01975	hp1	a0001	c0001	t0001	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01975	hp2	a0001	c0001	t0001	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01978	hp1	a0001	c0001	t0001	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01978	hp2	a0001	c0001	t0031	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01981	hp1	a0001	c0001	t0001	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01981	hp2	a0001	c0001	t0002	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01993	hp1	a0001	c0001	t0002	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01993	hp2	a0001	c0001	t0006	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02015	hp1	a0001	c0001	t0009	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02015	hp2	a0001	c0001	t0001	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02027	hp1	a0001	c0001	t0001	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02027	hp2	a0001	c0001	t0002	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02040	hp1	a0001	c0001	t0002	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02040	hp2	a0001	c0001	t0001	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02055	hp1	a0005	c0005	t0022	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02055	hp2	a0001	c0001	t0036	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02056	hp1	a0001	c0001	t0002	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02056	hp2	a0007	c0011	t0001	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02071	hp1	a0001	c0001	t0001	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02071	hp2	a0001	c0001	t0002	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02074	hp1	a0001	c0001	t0034	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02074	hp2	a0001	c0001	t0059	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02080	hp1	a0001	c0001	t0002	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02080	hp2	a0001	c0001	t0049	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02083	hp1	a0001	c0001	t0002	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02083	hp2	a0001	c0001	t0030	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02129	hp1	a0001	c0001	t0001	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02129	hp2	a0001	c0001	t0057	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02132	hp1	a0001	c0001	t0001	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02132	hp2	a0001	c0001	t0001	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02135	hp1	a0001	c0001	t0058	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02135	hp2	a0001	c0001	t0002	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02145	hp1	a0001	c0001	t0001	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02145	hp2	a0001	c0001	t0007	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02148	hp1	a0001	c0001	t0002	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02148	hp2	a0001	c0001	t0004	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02155	hp1	a0001	c0001	t0052	g0000	EAS	CDX	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02155	hp2	a0001	c0001	t0026	g0000	EAS	CDX	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02165	hp1	a0001	c0001	t0001	g0000	EAS	CDX	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02165	hp2	a0001	c0001	t0002	g0000	EAS	CDX	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02257	hp1	a0002	c0013	t0003	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02257	hp2	a0001	c0001	t0027	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02258	hp1	a0001	c0001	t0001	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02258	hp2	a0001	c0001	t0007	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02280	hp1	a0001	c0001	t0008	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02280	hp2	a0001	c0001	t0014	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02293	hp1	a0001	c0001	t0004	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02293	hp2	a0002	c0002	t0003	g0000	AMR	PEL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02451	hp1	a0001	c0001	t0004	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02451	hp2	a0001	c0001	t0055	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02523	hp1	a0001	c0001	t0002	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02523	hp2	a0001	c0001	t0009	g0000	EAS	KHV	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02572	hp1	a0002	c0002	t0003	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02572	hp2	a0001	c0001	t0013	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02602	hp1	a0005	c0005	t0047	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02602	hp2	a0001	c0001	t0011	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02615	hp1	a0001	c0001	t0001	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02615	hp2	a0001	c0001	t0002	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02622	hp1	a0001	c0001	t0007	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02622	hp2	a0001	c0001	t0001	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02630	hp1	a0002	c0002	t0003	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02630	hp2	a0001	c0001	t0001	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02647	hp1	a0001	c0001	t0001	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02647	hp2	a0001	c0001	t0007	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02698	hp1	a0001	c0001	t0001	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02698	hp2	a0004	c0006	t0021	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02717	hp1	a0001	c0001	t0013	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02717	hp2	a0001	c0001	t0004	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02723	hp1	a0001	c0001	t0014	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02723	hp2	a0002	c0002	t0003	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02735	hp1	a0001	c0001	t0001	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02735	hp2	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02809	hp1	a0001	c0001	t0028	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02809	hp2	a0001	c0008	t0003	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02818	hp1	a0001	c0001	t0053	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02818	hp2	a0002	c0002	t0003	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02886	hp1	a0002	c0002	t0003	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02886	hp2	a0001	c0001	t0017	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02895	hp1	a0001	c0001	t0008	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02895	hp2	a0005	c0005	t0001	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02896	hp1	a0001	c0001	t0002	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02896	hp2	a0001	c0001	t0008	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02897	hp1	a0001	c0001	t0002	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02897	hp2	a0001	c0001	t0008	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02922	hp1	a0001	c0001	t0025	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02922	hp2	a0001	c0001	t0001	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02965	hp1	a0001	c0001	t0001	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02965	hp2	a0001	c0001	t0015	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02970	hp1	a0001	c0001	t0008	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02970	hp2	a0002	c0002	t0003	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02976	hp1	a0004	c0006	t0023	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02976	hp2	a0001	c0001	t0002	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03017	hp1	a0002	c0002	t0003	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03017	hp2	a0001	c0001	t0001	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03041	hp1	a0001	c0001	t0001	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03041	hp2	a0001	c0001	t0018	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03098	hp1	a0001	c0001	t0017	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03098	hp2	a0001	c0001	t0007	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03130	hp1	a0002	c0002	t0041	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03130	hp2	a0001	c0001	t0029	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03139	hp1	a0001	c0001	t0007	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03139	hp2	a0004	c0006	t0023	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03195	hp1	a0001	c0007	t0008	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03195	hp2	a0001	c0001	t0018	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03209	hp1	a0001	c0001	t0004	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03209	hp2	a0002	c0002	t0003	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03225	hp1	a0001	c0001	t0024	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03225	hp2	a0001	c0001	t0001	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03239	hp1	a0001	c0001	t0001	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03239	hp2	a0006	c0010	t0024	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03453	hp1	a0001	c0001	t0054	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03453	hp2	a0001	c0001	t0008	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03486	hp1	a0001	c0001	t0001	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03486	hp2	a0005	c0005	t0022	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03490	hp1	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03490	hp2	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03491	hp1	a0003	c0004	t0010	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03491	hp2	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03492	hp1	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03492	hp2	a0003	c0004	t0010	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03516	hp1	a0001	c0001	t0028	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03516	hp2	a0001	c0001	t0001	g0000	AFR	ESN	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03540	hp1	a0001	c0001	t0037	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03540	hp2	a0001	c0001	t0004	g0000	AFR	GWD	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03579	hp1	a0001	c0001	t0025	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03579	hp2	a0002	c0002	t0003	g0000	AFR	MSL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03654	hp1	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03654	hp2	a0002	c0002	t0010	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03669	hp1	a0002	c0002	t0003	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03669	hp2	a0001	c0001	t0001	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03704	hp1	a0001	c0001	t0004	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03704	hp2	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03710	hp1	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03710	hp2	a0001	c0001	t0002	g0000	SAS	PJL	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03831	hp1	a0003	c0004	t0032	g0000	SAS	BEB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03831	hp2	a0001	c0001	t0002	g0000	SAS	BEB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03927	hp1	a0001	c0001	t0006	g0000	SAS	BEB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03927	hp2	a0002	c0002	t0020	g0000	SAS	BEB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03942	hp1	a0001	c0001	t0001	g0000	SAS	BEB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG03942	hp2	a0001	c0001	t0011	g0000	SAS	BEB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04115	hp1	a0001	c0001	t0002	g0000	SAS	STU	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04115	hp2	a0002	c0002	t0020	g0000	SAS	STU	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04184	hp1	a0001	c0001	t0002	g0000	SAS	BEB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04184	hp2	a0004	c0006	t0021	g0000	SAS	BEB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04199	hp1	a0001	c0001	t0001	g0000	SAS	STU	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04199	hp2	a0002	c0002	t0039	g0000	SAS	STU	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04204	hp1	a0001	c0001	t0033	g0000	SAS	STU	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04204	hp2	a0001	c0001	t0002	g0000	SAS	STU	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04228	hp1	a0001	c0001	t0002	g0000	SAS	STU	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG04228	hp2	a0001	c0001	t0001	g0000	SAS	STU	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18522	hp1	a0001	c0001	t0001	g0000	AFR	YRI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18522	hp2	a0001	c0001	t0015	g0000	AFR	YRI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18612	hp1	a0001	c0001	t0001	g0000	EAS	CHB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18612	hp2	a0001	c0001	t0001	g0000	EAS	CHB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18747	hp1	a0001	c0001	t0001	g0000	EAS	CHB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18747	hp2	a0001	c0001	t0001	g0000	EAS	CHB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18906	hp1	a0001	c0001	t0004	g0000	AFR	YRI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18906	hp2	a0001	c0001	t0027	g0000	AFR	YRI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18942	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18942	hp2	a0001	c0001	t0006	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18943	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18943	hp2	a0002	c0003	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18945	hp1	a0002	c0003	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18945	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18946	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18946	hp2	a0001	c0001	t0009	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18947	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18947	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18948	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18948	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18949	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18949	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18950	hp1	a0001	c0001	t0012	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18950	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18951	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18951	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18952	hp1	a0002	c0002	t0005	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18952	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18953	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18953	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18954	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18954	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18957	hp1	a0003	c0004	t0010	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18957	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18959	hp1	a0001	c0001	t0016	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18959	hp2	a0003	c0004	t0010	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18960	hp1	a0002	c0003	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18960	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18962	hp1	a0001	c0001	t0009	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18962	hp2	a0001	c0012	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18966	hp1	a0002	c0002	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18966	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18967	hp1	a0002	c0002	t0005	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18967	hp2	a0001	c0001	t0011	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18968	hp1	a0002	c0003	t0038	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18968	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18969	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18969	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18971	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18971	hp2	a0001	c0001	t0051	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18972	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18972	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18973	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18973	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18979	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18979	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18980	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18980	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18982	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18982	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18983	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18983	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18984	hp1	a0001	c0001	t0050	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18984	hp2	a0003	c0004	t0010	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18985	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18985	hp2	a0002	c0002	t0019	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18986	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18986	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18988	hp1	a0002	c0003	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18988	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18989	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18989	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18992	hp1	a0002	c0002	t0005	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18992	hp2	a0001	c0001	t0006	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18994	hp1	a0002	c0002	t0005	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18994	hp2	a0002	c0003	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18995	hp1	a0002	c0003	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18995	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18998	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18998	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19000	hp1	a0001	c0001	t0012	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19000	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19001	hp1	a0001	c0001	t0012	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19001	hp2	a0002	c0002	t0005	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19002	hp1	a0001	c0001	t0004	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19002	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19004	hp1	a0001	c0001	t0006	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19004	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19005	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19005	hp2	a0002	c0003	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19007	hp1	a0002	c0002	t0005	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19007	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19009	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19009	hp2	a0002	c0002	t0019	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19010	hp1	a0001	c0001	t0006	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19010	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19011	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19011	hp2	a0001	c0001	t0012	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19030	hp1	a0001	c0001	t0007	g0000	AFR	LWK	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19030	hp2	a0001	c0001	t0001	g0000	AFR	LWK	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19043	hp1	a0001	c0001	t0001	g0000	AFR	LWK	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19043	hp2	a0001	c0001	t0008	g0000	AFR	LWK	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19055	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19055	hp2	a0001	c0001	t0006	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19058	hp1	a0001	c0001	t0006	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19058	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19060	hp1	a0003	c0004	t0010	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19060	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19063	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19063	hp2	a0001	c0001	t0011	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19065	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19065	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19067	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19067	hp2	a0001	c0001	t0009	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19068	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19068	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19074	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19074	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19077	hp1	a0001	c0001	t0009	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19077	hp2	a0002	c0002	t0005	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19080	hp1	a0002	c0002	t0003	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19080	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19081	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19081	hp2	a0001	c0001	t0006	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19085	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19085	hp2	a0002	c0002	t0048	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19086	hp1	a0001	c0001	t0016	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19086	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19089	hp1	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19089	hp2	a0002	c0002	t0005	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19090	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19090	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19091	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19091	hp2	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19240	hp1	a0001	c0001	t0013	g0000	AFR	YRI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA19240	hp2	a0001	c0001	t0001	g0000	AFR	YRI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20129	hp1	a0001	c0001	t0001	g0000	AFR	ASW	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20129	hp2	a0001	c0001	t0017	g0000	AFR	ASW	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20752	hp1	a0001	c0001	t0001	g0000	EUR	TSI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20752	hp2	a0001	c0001	t0002	g0000	EUR	TSI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20805	hp1	a0001	c0001	t0002	g0000	EUR	TSI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20805	hp2	a0001	c0001	t0002	g0000	EUR	TSI	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20905	hp1	a0001	c0001	t0002	g0000	SAS	GIH	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20905	hp2	a0001	c0001	t0002	g0000	SAS	GIH	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01123	hp1	a0001	c0001	t0001	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG01123	hp2	a0001	c0001	t0002	g0000	AMR	CLM	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02109	hp1	a0001	c0001	t0002	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02109	hp2	a0001	c0001	t0018	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02486	hp1	a0001	c0001	t0004	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02486	hp2	a0001	c0001	t0001	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02559	hp1	a0001	c0001	t0001	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG02559	hp2	a0001	c0001	t0001	g0000	AFR	ACB	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG06807	hp1	a0001	c0001	t0056	g0000	AFR	USA	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
HG06807	hp2	a0001	c0001	t0001	g0000	AFR	USA	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18955	hp1	a0001	c0001	t0001	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA18955	hp2	a0001	c0001	t0002	g0000	EAS	JPT	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20300	hp1	a0001	c0001	t0001	g0000	AFR	USA	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA20300	hp2	a0001	c0001	t0045	g0000	AFR	USA	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA21309	hp1	a0001	c0001	t0042	g0000	AFR	LWK	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
NA21309	hp2	a0001	c0001	t0001	g0000	AFR	LWK	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
homoSapiens_chm13v2	hp1	a0001	c0001	t0002	g0000	REF	REF	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706
homoSapiens_grch38	hp1	a0001	c0001	t0002	g0000	REF	REF	SOX1_chr13_112062149_112076706	SOX1	chr13	112062149	112076706

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chr13:112068073	G G	A A	1	a0003 a0003	7	HG03491.hp1 HG03492.hp2 HG03831.hp1 others(4): Show HG03491.hp1 HG03492.hp2 HG03831.hp1 NA18957.hp1 NA18959.hp2 NA18984.hp2 NA19060.hp1	missense_variant	MODERATE	c.415G>A c.415G>A	p.Gly139Ser p.Gly139Ser	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	925/4558	415/1176	139/391		chr13	112068073
chr13:112068121	ATGGGCG ATGGGCG	A A	2	a0002 a0005 a0002 a0005	47	HG00673.hp2 HG00733.hp2 HG00738.hp2 others(44): Show HG00673.hp2 HG00733.hp2 HG00738.hp2 HG01074.hp1 HG01346.hp1 HG02055.hp1 HG02257.hp1 HG02293.hp2 HG02572.hp1 HG02602.hp1 HG02630.hp1 HG02723.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp2 HG02970.hp2 HG03017.hp1 HG03130.hp1 HG03209.hp2 HG03486.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03927.hp2 HG04115.hp2 HG04199.hp2 NA18943.hp2 NA18945.hp1 NA18952.hp1 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18985.hp2 NA18988.hp1 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA19001.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19077.hp2 NA19080.hp1 NA19085.hp2 NA19089.hp2	disruptive_inframe_deletion	MODERATE	c.482_487delTGGGCG c.482_487delTGGGCG	p.Val161_Gly162del p.Val161_Gly162del	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	992/4558	482/1176	161/391	INFO_REALIGN_3_PRIME	chr13	112068121
chr13:112068746	C C	T T	1	a0007 a0007	1	HG02056.hp2 HG02056.hp2	missense_variant	MODERATE	c.1088C>T c.1088C>T	p.Ala363Val p.Ala363Val	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1598/4558	1088/1176	363/391		chr13	112068746
chr13:112068770	T T	C C	1	a0006 a0006	1	HG03239.hp2 HG03239.hp2	missense_variant	MODERATE	c.1112T>C c.1112T>C	p.Leu371Pro p.Leu371Pro	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1622/4558	1112/1176	371/391		chr13	112068770
chr13:112068797	C C	CGGGCGT CGGGCGT	2	a0002 a0004 a0002 a0004	48	HG00673.hp2 HG00733.hp2 HG00738.hp2 others(45): Show HG00673.hp2 HG00733.hp2 HG00738.hp2 HG01074.hp1 HG01192.hp1 HG01346.hp1 HG02257.hp1 HG02293.hp2 HG02572.hp1 HG02630.hp1 HG02698.hp2 HG02723.hp2 HG02818.hp2 HG02886.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03927.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp2 NA18943.hp2 NA18945.hp1 NA18952.hp1 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18985.hp2 NA18988.hp1 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA19001.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19077.hp2 NA19080.hp1 NA19085.hp2 NA19089.hp2	conservative_inframe_insertion	MODERATE	c.1141_1146dupGGCGTG c.1141_1146dupGGCGTG	p.Gly381_Val382dup p.Gly381_Val382dup	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1657/4558	1147/1176	383/391	INFO_REALIGN_3_PRIME	chr13	112068797

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr13:112067685	C C	T T	2	a0001c0007 a0002c0013 a0001c0007 a0002c0013	3	HG01243.hp2 HG02257.hp1 HG03195.hp1 HG01243.hp2 HG02257.hp1 HG03195.hp1	synonymous_variant	LOW	c.27C>T c.27C>T	p.Asp9Asp p.Asp9Asp	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	537/4558	27/1176	9/391	chr13	112067685
chr13:112067742	G G	T T	1	a0001c0012 a0001c0012	1	NA18962.hp2 NA18962.hp2	synonymous_variant	LOW	c.84G>T c.84G>T	p.Ala28Ala p.Ala28Ala	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	594/4558	84/1176	28/391	chr13	112067742
chr13:112068252	G G	A A	1	a0001c0008 a0001c0008	1	HG02809.hp2 HG02809.hp2	synonymous_variant	LOW	c.594G>A c.594G>A	p.Ala198Ala p.Ala198Ala	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1104/4558	594/1176	198/391	chr13	112068252
chr13:112068372	G G	C C	1	a0002c0003 a0002c0003	8	NA18943.hp2 NA18945.hp1 NA18960.hp1 others(5): Show NA18943.hp2 NA18945.hp1 NA18960.hp1 NA18968.hp1 NA18988.hp1 NA18994.hp2 NA18995.hp1 NA19005.hp2	synonymous_variant	LOW	c.714G>C c.714G>C	p.Ala238Ala p.Ala238Ala	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1224/4558	714/1176	238/391	chr13	112068372
chr13:112068759	G G	A A	1	a0004c0009 a0004c0009	1	HG01192.hp1 HG01192.hp1	synonymous_variant	LOW	c.1101G>A c.1101G>A	p.Arg367Arg p.Arg367Arg	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1611/4558	1101/1176	367/391	chr13	112068759
chr13:112068813	G G	A A	1	a0002c0013 a0002c0013	1	HG02257.hp1 HG02257.hp1	synonymous_variant	LOW	c.1155G>A c.1155G>A	p.Thr385Thr p.Thr385Thr	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1665/4558	1155/1176	385/391	chr13	112068813

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr13:112067223	G G	T T	2	a0001c0001t0058 a0001c0001t0059 a0001c0001t0058 a0001c0001t0059	2	HG02074.hp2 HG02135.hp1 HG02074.hp2 HG02135.hp1	5_prime_UTR_variant	MODIFIER	c.-436G>T c.-436G>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	436		chr13	112067223
chr13:112067278	C C	G G	1	a0001c0001t0057 a0001c0001t0057	1	HG02129.hp2 HG02129.hp2	5_prime_UTR_variant	MODIFIER	c.-381C>G c.-381C>G	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	381		chr13	112067278
chr13:112067373	T T	C C	1	a0001c0001t0030 a0001c0001t0030	1	HG02083.hp2 HG02083.hp2	5_prime_UTR_variant	MODIFIER	c.-286T>C c.-286T>C	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	286		chr13	112067373
chr13:112067503	T T	C C	1	a0001c0001t0031 a0001c0001t0031	1	HG01978.hp2 HG01978.hp2	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-156T>C c.-156T>C	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1			chr13	112067503
chr13:112067545	A A	AC AC	9	a0001c0001t0011 a0001c0001t0012 a0001c0001t0033 others(6): Show a0001c0001t0011 a0001c0001t0012 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0002c0002t0019 a0003c0004t0032	17	HG00735.hp1 HG01099.hp2 HG02055.hp2 others(14): Show HG00735.hp1 HG01099.hp2 HG02055.hp2 HG02074.hp1 HG02602.hp2 HG03540.hp1 HG03831.hp1 HG03942.hp2 HG04204.hp1 NA18950.hp1 NA18967.hp2 NA18985.hp2 NA19000.hp1 NA19001.hp1 NA19009.hp2 NA19011.hp2 NA19063.hp2	5_prime_UTR_variant	MODIFIER	c.-107dupC c.-107dupC	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	106	INFO_REALIGN_3_PRIME	chr13	112067545
chr13:112067612	C C	G G	1	a0001c0001t0056 a0001c0001t0056	1	HG06807.hp1 HG06807.hp1	5_prime_UTR_variant	MODIFIER	c.-47C>G c.-47C>G	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	47		chr13	112067612
chr13:112068900	G G	T T	12	a0001c0001t0007 a0001c0001t0014 a0001c0001t0017 others(9): Show a0001c0001t0007 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0036 a0001c0001t0037 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055	30	HG01109.hp1 HG01243.hp1 HG01884.hp1 others(27): Show HG01109.hp1 HG01243.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02451.hp2 HG02622.hp1 HG02647.hp2 HG02723.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03453.hp1 HG03516.hp1 HG03540.hp1 NA18906.hp2 NA19030.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.66G>T c.66G>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	66		chr13	112068900
chr13:112068918	G G	C C	33	a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 others(30): Show a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0036 a0001c0001t0037 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0007t0008 a0001c0007t0013 a0001c0008t0003 a0002c0002t0003 a0002c0002t0005 a0002c0002t0010 a0002c0002t0019 a0002c0002t0020 a0002c0002t0039 a0002c0002t0041 a0002c0003t0003 a0002c0003t0038 a0002c0013t0003 a0003c0004t0010 a0003c0004t0032 a0004c0006t0021 a0004c0009t0040 a0005c0005t0022	98	HG00673.hp2 HG00733.hp2 HG00738.hp2 others(95): Show HG00673.hp2 HG00733.hp2 HG00738.hp2 HG01074.hp1 HG01109.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01346.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03831.hp1 HG03927.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp2 HG06807.hp1 NA18906.hp2 NA18943.hp2 NA18945.hp1 NA18952.hp1 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18984.hp2 NA18985.hp2 NA18988.hp1 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA19001.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19030.hp1 NA19043.hp2 NA19060.hp1 NA19077.hp2 NA19080.hp1 NA19089.hp2 NA19240.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.84G>C c.84G>C	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	84		chr13	112068918
chr13:112069136	C C	T T	1	a0001c0001t0052 a0001c0001t0052	1	HG02155.hp1 HG02155.hp1	3_prime_UTR_variant	MODIFIER	c.302C>T c.302C>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	302		chr13	112069136
chr13:112069232	G G	A A	1	a0001c0001t0042 a0001c0001t0042	1	NA21309.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.398G>A c.398G>A	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	398		chr13	112069232
chr13:112069264	C C	G G	1	a0001c0001t0035 a0001c0001t0035	1	HG01099.hp2 HG01099.hp2	3_prime_UTR_variant	MODIFIER	c.430C>G c.430C>G	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	430		chr13	112069264
chr13:112069268	G G	T T	1	a0001c0001t0016 a0001c0001t0016	3	HG00673.hp1 NA18959.hp1 NA19086.hp1 HG00673.hp1 NA18959.hp1 NA19086.hp1	3_prime_UTR_variant	MODIFIER	c.434G>T c.434G>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	434		chr13	112069268
chr13:112069351	A A	G G	1	a0002c0002t0041 a0002c0002t0041	1	HG03130.hp1 HG03130.hp1	3_prime_UTR_variant	MODIFIER	c.517A>G c.517A>G	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	517		chr13	112069351
chr13:112069435	G G	C C	1	a0001c0001t0056 a0001c0001t0056	1	HG06807.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.601G>C c.601G>C	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	601		chr13	112069435
chr13:112069445	A A	AT AT	5	a0001c0001t0009 a0001c0001t0034 a0001c0001t0050 others(2): Show a0001c0001t0009 a0001c0001t0034 a0001c0001t0050 a0001c0001t0051 a0001c0001t0055	12	HG01257.hp2 HG01361.hp1 HG02015.hp1 others(9): Show HG01257.hp2 HG01361.hp1 HG02015.hp1 HG02074.hp1 HG02451.hp2 HG02523.hp2 NA18946.hp2 NA18962.hp1 NA18971.hp2 NA18984.hp1 NA19067.hp2 NA19077.hp1	3_prime_UTR_variant	MODIFIER	c.622dupT c.622dupT	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	623	INFO_REALIGN_3_PRIME	chr13	112069445
chr13:112069445	AT AT	A A	18	a0001c0001t0008 a0001c0001t0013 a0001c0001t0024 others(15): Show a0001c0001t0008 a0001c0001t0013 a0001c0001t0024 a0001c0001t0056 a0001c0007t0008 a0001c0007t0013 a0001c0008t0003 a0002c0002t0003 a0002c0002t0005 a0002c0002t0019 a0002c0002t0020 a0002c0002t0039 a0002c0002t0041 a0002c0003t0003 a0002c0003t0038 a0002c0013t0003 a0004c0006t0023 a0006c0010t0024	59	HG00673.hp2 HG00733.hp2 HG00738.hp2 others(56): Show HG00673.hp2 HG00733.hp2 HG00738.hp2 HG01074.hp1 HG01243.hp2 HG01346.hp1 HG02257.hp1 HG02280.hp1 HG02293.hp2 HG02572.hp1 HG02572.hp2 HG02630.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp2 HG03579.hp2 HG03669.hp1 HG03927.hp2 HG04115.hp2 HG04199.hp2 HG06807.hp1 NA18943.hp2 NA18945.hp1 NA18952.hp1 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18985.hp2 NA18988.hp1 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA19001.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19043.hp2 NA19077.hp2 NA19080.hp1 NA19089.hp2 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.622delT c.622delT	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	622	INFO_REALIGN_3_PRIME	chr13	112069445
chr13:112069456	T T	G G	3	a0001c0001t0043 a0001c0001t0044 a0002c0002t0020 a0001c0001t0043 a0001c0001t0044 a0002c0002t0020	4	HG01257.hp1 HG01891.hp1 HG03927.hp2 others(1): Show HG01257.hp1 HG01891.hp1 HG03927.hp2 HG04115.hp2	3_prime_UTR_variant	MODIFIER	c.622T>G c.622T>G	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	622		chr13	112069456
chr13:112069628	G G	A A	2	a0001c0001t0025 a0001c0001t0045 a0001c0001t0025 a0001c0001t0045	3	HG02922.hp1 HG03579.hp1 NA20300.hp2 HG02922.hp1 HG03579.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.794G>A c.794G>A	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	794		chr13	112069628
chr13:112069766	AT AT	A A	16	a0001c0001t0008 a0001c0001t0013 a0001c0007t0008 others(13): Show a0001c0001t0008 a0001c0001t0013 a0001c0007t0008 a0001c0007t0013 a0001c0008t0003 a0002c0002t0003 a0002c0002t0005 a0002c0002t0019 a0002c0002t0020 a0002c0002t0039 a0002c0002t0041 a0002c0003t0003 a0002c0003t0038 a0002c0013t0003 a0004c0006t0023 a0004c0009t0040	57	HG00673.hp2 HG00733.hp2 HG00738.hp2 others(54): Show HG00673.hp2 HG00733.hp2 HG00738.hp2 HG01074.hp1 HG01192.hp1 HG01243.hp2 HG01346.hp1 HG02257.hp1 HG02280.hp1 HG02293.hp2 HG02572.hp1 HG02572.hp2 HG02630.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03453.hp2 HG03579.hp2 HG03669.hp1 HG03927.hp2 HG04115.hp2 HG04199.hp2 NA18943.hp2 NA18945.hp1 NA18952.hp1 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18985.hp2 NA18988.hp1 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA19001.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19043.hp2 NA19077.hp2 NA19080.hp1 NA19089.hp2 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.937delT c.937delT	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	937	INFO_REALIGN_3_PRIME	chr13	112069766
chr13:112069874	C C	T T	1	a0005c0005t0022 a0005c0005t0022	2	HG02055.hp1 HG03486.hp2 HG02055.hp1 HG03486.hp2	3_prime_UTR_variant	MODIFIER	c.1040C>T c.1040C>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1040		chr13	112069874
chr13:112069901	C C	T T	1	a0001c0001t0056 a0001c0001t0056	1	HG06807.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.1067C>T c.1067C>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1067		chr13	112069901
chr13:112069929	G G	A A	1	a0001c0001t0050 a0001c0001t0050	1	NA18984.hp1 NA18984.hp1	3_prime_UTR_variant	MODIFIER	c.1095G>A c.1095G>A	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1095		chr13	112069929
chr13:112070183	C C	G G	1	a0005c0005t0022 a0005c0005t0022	2	HG02055.hp1 HG03486.hp2 HG02055.hp1 HG03486.hp2	3_prime_UTR_variant	MODIFIER	c.1349C>G c.1349C>G	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1349		chr13	112070183
chr13:112070336	A A	G G	1	a0001c0001t0026 a0001c0001t0026	2	HG00544.hp1 HG02155.hp2 HG00544.hp1 HG02155.hp2	3_prime_UTR_variant	MODIFIER	c.1502A>G c.1502A>G	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1502		chr13	112070336
chr13:112070373	T T	G G	1	a0001c0001t0046 a0001c0001t0046	1	HG00323.hp2 HG00323.hp2	3_prime_UTR_variant	MODIFIER	c.1539T>G c.1539T>G	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1539		chr13	112070373
chr13:112070406	G G	GT GT	13	a0001c0001t0049 a0001c0008t0003 a0002c0002t0003 others(10): Show a0001c0001t0049 a0001c0008t0003 a0002c0002t0003 a0002c0002t0005 a0002c0002t0019 a0002c0002t0020 a0002c0002t0039 a0002c0002t0041 a0002c0002t0048 a0002c0003t0003 a0002c0013t0003 a0004c0006t0023 a0004c0009t0040	46	HG00673.hp2 HG00733.hp2 HG00738.hp2 others(43): Show HG00673.hp2 HG00733.hp2 HG00738.hp2 HG01074.hp1 HG01192.hp1 HG01346.hp1 HG02080.hp2 HG02257.hp1 HG02293.hp2 HG02572.hp1 HG02630.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03579.hp2 HG03669.hp1 HG03927.hp2 HG04115.hp2 HG04199.hp2 NA18943.hp2 NA18945.hp1 NA18952.hp1 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18985.hp2 NA18988.hp1 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA19001.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19077.hp2 NA19080.hp1 NA19085.hp2 NA19089.hp2	3_prime_UTR_variant	MODIFIER	c.1582dupT c.1582dupT	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1583	INFO_REALIGN_3_PRIME	chr13	112070406
chr13:112070571	G G	A A	1	a0005c0005t0047 a0005c0005t0047	1	HG02602.hp1 HG02602.hp1	3_prime_UTR_variant	MODIFIER	c.1737G>A c.1737G>A	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	1737		chr13	112070571
chr13:112070835	C C	T T	1	a0001c0001t0054 a0001c0001t0054	1	HG03453.hp1 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.2001C>T c.2001C>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2001		chr13	112070835
chr13:112070857	A A	AC AC	14	a0001c0001t0004 a0001c0001t0006 a0001c0001t0014 others(11): Show a0001c0001t0004 a0001c0001t0006 a0001c0001t0014 a0001c0001t0027 a0001c0001t0028 a0001c0001t0033 a0001c0001t0036 a0001c0001t0056 a0001c0001t0058 a0002c0002t0005 a0002c0002t0019 a0002c0002t0048 a0003c0004t0032 a0005c0005t0022	51	HG00673.hp2 HG00738.hp1 HG01074.hp2 others(48): Show HG00673.hp2 HG00738.hp1 HG01074.hp2 HG01106.hp1 HG01255.hp1 HG01496.hp1 HG01884.hp1 HG01884.hp2 HG01993.hp2 HG02055.hp1 HG02055.hp2 HG02135.hp1 HG02148.hp2 HG02257.hp2 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02486.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG03209.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp2 HG03704.hp1 HG03831.hp1 HG03927.hp1 HG04204.hp1 HG06807.hp1 NA18906.hp1 NA18906.hp2 NA18942.hp2 NA18952.hp1 NA18967.hp1 NA18985.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA19001.hp2 NA19002.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19055.hp2 NA19058.hp1 NA19077.hp2 NA19081.hp2 NA19085.hp2 NA19089.hp2	3_prime_UTR_variant	MODIFIER	c.2032dupC c.2032dupC	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2033	INFO_REALIGN_3_PRIME	chr13	112070857
chr13:112070865	C C	A A	1	a0004c0009t0040 a0004c0009t0040	1	HG01192.hp1 HG01192.hp1	3_prime_UTR_variant	MODIFIER	c.2031C>A c.2031C>A	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2031		chr13	112070865
chr13:112070866	CT CT	C C	7	a0001c0001t0008 a0001c0001t0015 a0001c0001t0017 others(4): Show a0001c0001t0008 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0053 a0001c0007t0008 a0004c0009t0040	19	HG00741.hp1 HG01192.hp1 HG02109.hp2 others(16): Show HG00741.hp1 HG01192.hp1 HG02109.hp2 HG02280.hp1 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp1 HG03041.hp2 HG03098.hp1 HG03195.hp1 HG03195.hp2 HG03453.hp2 NA18522.hp2 NA19043.hp2 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.2033delT c.2033delT	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2033		chr13	112070866
chr13:112070867	T T	C C	10	a0001c0001t0007 a0001c0001t0014 a0001c0001t0027 others(7): Show a0001c0001t0007 a0001c0001t0014 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0036 a0001c0001t0037 a0001c0001t0045 a0001c0001t0054 a0001c0001t0055	24	HG01109.hp1 HG01243.hp1 HG01884.hp1 others(21): Show HG01109.hp1 HG01243.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02055.hp2 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02451.hp2 HG02622.hp1 HG02647.hp2 HG02723.hp1 HG02809.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03453.hp1 HG03516.hp1 HG03540.hp1 NA18906.hp2 NA19030.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.2033T>C c.2033T>C	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2033		chr13	112070867
chr13:112070882	T T	C C	31	a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 others(28): Show a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0036 a0001c0001t0037 a0001c0001t0045 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0007t0008 a0001c0007t0013 a0001c0008t0003 a0002c0002t0003 a0002c0002t0005 a0002c0002t0019 a0002c0002t0020 a0002c0002t0039 a0002c0002t0041 a0002c0002t0048 a0002c0003t0003 a0002c0003t0038 a0002c0013t0003 a0004c0006t0023 a0004c0009t0040	90	HG00673.hp2 HG00733.hp2 HG00738.hp2 others(87): Show HG00673.hp2 HG00733.hp2 HG00738.hp2 HG01074.hp1 HG01109.hp1 HG01192.hp1 HG01243.hp1 HG01243.hp2 HG01346.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp1 HG03453.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG03669.hp1 HG03927.hp2 HG04115.hp2 HG04199.hp2 HG06807.hp1 NA18906.hp2 NA18943.hp2 NA18945.hp1 NA18952.hp1 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18985.hp2 NA18988.hp1 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA19001.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp2 NA19030.hp1 NA19043.hp2 NA19077.hp2 NA19080.hp1 NA19085.hp2 NA19089.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.2048T>C c.2048T>C	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2048		chr13	112070882
chr13:112071054	C C	T T	1	a0002c0002t0039 a0002c0002t0039	1	HG04199.hp2 HG04199.hp2	3_prime_UTR_variant	MODIFIER	c.2220C>T c.2220C>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2220		chr13	112071054
chr13:112071124	G G	C C	4	a0001c0001t0027 a0001c0001t0029 a0001c0001t0036 others(1): Show a0001c0001t0027 a0001c0001t0029 a0001c0001t0036 a0001c0001t0053	6	HG01243.hp1 HG02055.hp2 HG02257.hp2 others(3): Show HG01243.hp1 HG02055.hp2 HG02257.hp2 HG02818.hp1 HG03130.hp2 NA18906.hp2	3_prime_UTR_variant	MODIFIER	c.2290G>C c.2290G>C	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2290		chr13	112071124
chr13:112071257	C C	T T	4	a0001c0001t0008 a0001c0001t0013 a0001c0007t0008 others(1): Show a0001c0001t0008 a0001c0001t0013 a0001c0007t0008 a0001c0007t0013	12	HG01243.hp2 HG02280.hp1 HG02572.hp2 others(9): Show HG01243.hp2 HG02280.hp1 HG02572.hp2 HG02717.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp1 HG03195.hp1 HG03453.hp2 NA19043.hp2 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.2423C>T c.2423C>T	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2423		chr13	112071257
chr13:112071270	G G	A A	3	a0001c0001t0017 a0001c0001t0028 a0001c0001t0054 a0001c0001t0017 a0001c0001t0028 a0001c0001t0054	6	HG02809.hp1 HG02886.hp2 HG03098.hp1 others(3): Show HG02809.hp1 HG02886.hp2 HG03098.hp1 HG03453.hp1 HG03516.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.2436G>A c.2436G>A	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2436		chr13	112071270
chr13:112071477	G G	A A	53	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(50): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0024 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0001t0034 a0001c0001t0036 a0001c0001t0037 a0001c0001t0042 a0001c0001t0043 a0001c0001t0046 a0001c0001t0051 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0058 a0001c0001t0059 a0001c0007t0008 a0001c0007t0013 a0001c0008t0003 a0002c0002t0003 a0002c0002t0005 a0002c0002t0010 a0002c0002t0019 a0002c0002t0020 a0002c0002t0039 a0002c0002t0041 a0002c0002t0048 a0002c0003t0003 a0002c0003t0038 a0002c0013t0003 a0003c0004t0010 a0003c0004t0032 a0004c0006t0023 a0004c0009t0040 a0005c0005t0001 a0005c0005t0022 a0006c0010t0024 a0007c0011t0001	254	HG00280.hp1 HG00323.hp1 HG00323.hp2 others(251): Show HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp2 HG00544.hp1 HG00597.hp1 HG00639.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18942.hp1 NA18943.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp2 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18959.hp2 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18971.hp2 NA18972.hp1 NA18973.hp1 NA18973.hp2 NA18979.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp2 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19058.hp2 NA19060.hp1 NA19063.hp1 NA19065.hp2 NA19068.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp2 NA19080.hp1 NA19080.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp2 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA21309.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.2643G>A c.2643G>A	SOX1	ENSG00000182968.5	transcript	ENST00000330949.3	protein_coding	1/1	2643		chr13	112071477

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

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🧬 JoGo Online Haplotype Explorer SOX1_chr13_112062149_112076706

JoGo Local Haplotype Explorer (on iGV) SOX1_chr13_112062149_112076706

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 7)

CCoding Level Haplotype Info (Total: 13)

TTranscript Level Haplotype Info (Total: 59)

GGenebody Level Haplotype Info (Total: 1)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 13)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 69)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 69)

Haplotype Details by Sample (Haploid Level) (Total: 388)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 5)

CCoding Level Variants (Synonymous Mutations) (Total: 6)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 38)

GGenebody Level Haplotype Variants (Intron) (Total: 0)

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Annotation (Repeats)

Annotation (SNP Array)