Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SCG3_chr15_51676503_51726026	51709693	ATATATAT others(3): Show ATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG03490.hp1 NA19062.hp1 NA19088.hp2 HG03490.hp1 NA19062.hp1 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0009 a0001c0001t0002 a0001c0001t0009	a0001c0001t0002g0190 a0001c0001t0002g0203 a0001c0001t0009g0186 a0001c0001t0002g0190 a0001c0001t0002g0203 a0001c0001t0009g0186	3	402	0.0075	-10	c.120 others(29): Show c.1208-3638_1208-3629delATATATATTT	SCG3	ENSG00000104112.9	transcript	ENST00000220478.8	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCG3_chr15_51676503_51726026	51709695	ATATATAT others(3): Show ATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01099.hp2 HG01168.hp2 others(4): Show HG00423.hp2 HG01099.hp2 HG01168.hp2 HG03239.hp1 HG03710.hp1 HG04204.hp2 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0103 a0001c0001t0002g0155 a0001c0001t0002g0157 others(4): Show a0001c0001t0001g0103 a0001c0001t0002g0155 a0001c0001t0002g0157 a0001c0001t0002g0173 a0001c0001t0003g0286 a0001c0001t0003g0324 a0001c0001t0003g0325	7	402	0.0174	-10	c.120 others(29): Show c.1208-3636_1208-3627delATATATTTTT	SCG3	ENSG00000104112.9	transcript	ENST00000220478.8	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCG3_chr15_51676503_51726026	51709697	ATATATTT others(3): Show ATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00738.hp1 HG01081.hp1 others(9): Show HG00140.hp1 HG00738.hp1 HG01081.hp1 HG01256.hp1 HG01361.hp2 HG02622.hp2 HG02698.hp1 HG03225.hp1 HG03834.hp2 NA18953.hp2 NA18965.hp1 NA19074.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0002c0003t0003	a0001c0001t0001g0150 a0001c0001t0002g0149 a0001c0001t0002g0156 others(9): Show a0001c0001t0001g0150 a0001c0001t0002g0149 a0001c0001t0002g0156 a0001c0001t0002g0214 a0001c0001t0002g0389 a0001c0001t0003g0098 a0001c0001t0003g0099 a0001c0001t0003g0100 a0001c0001t0003g0105 a0001c0001t0003g0248 a0001c0001t0005g0283 a0002c0003t0003g0375	12	402	0.0299	-10	c.120 others(29): Show c.1208-3634_1208-3625delATATTTTTTT	SCG3	ENSG00000104112.9	transcript	ENST00000220478.8	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCG3_chr15_51676503_51726026	51709699	ATATTTTT others(3): Show ATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG02809.hp2 HG03471.hp1 others(4): Show HG00099.hp1 HG02809.hp2 HG03471.hp1 NA18950.hp1 NA18986.hp1 NA19007.hp2 NA19079.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0002c0009 a0001c0001 a0002c0003 a0002c0009	a0001c0001t0001 a0001c0001t0002 a0002c0003t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0003t0003 a0002c0009t0003	a0001c0001t0001g0101 a0001c0001t0001g0178 a0001c0001t0002g0071 others(4): Show a0001c0001t0001g0101 a0001c0001t0001g0178 a0001c0001t0002g0071 a0001c0001t0002g0123 a0001c0001t0002g0152 a0002c0003t0003g0369 a0002c0009t0003g0378	7	402	0.0174	-10	c.120 others(29): Show c.1208-3632_1208-3623delATTTTTTTTT	SCG3	ENSG00000104112.9	transcript	ENST00000220478.8	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCG3_chr15_51676503_51726026	51709701	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02818.hp1 HG03579.hp2 others(2): Show HG02258.hp1 HG02818.hp1 HG03579.hp2 HG03831.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0003 a0001c0001 a0001c0005 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0005t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0005 a0002c0003t0003	a0001c0001t0001g0361 a0001c0001t0002g0204 a0001c0001t0002g0215 others(2): Show a0001c0001t0001g0361 a0001c0001t0002g0204 a0001c0001t0002g0215 a0001c0005t0005g0090 a0002c0003t0003g0060	5	402	0.0124	-10	c.120 others(29): Show c.1208-3604_1208-3595delTTTTTTTTTT	SCG3	ENSG00000104112.9	transcript	ENST00000220478.8	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCG5_chr15_32636710_32702092	32640121	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0231 a0001c0001t0002g0231	1	415	0.0024	-10	c.-16 others(21): Show c.-1664_-1655delTTTTTTTTTT	SCG5	ENSG00000166922.9	transcript	ENST00000300175.9	protein_coding		1588		chr15	TogoVar
SCG5_chr15_32636710_32702092	32650661	TGATGGCC others(3): Show TGATGGCCTTG	T T	intron_variant intron_variant	MODIFIER	HG02129.hp1 NA18956.hp1 NA18961.hp1 others(2): Show HG02129.hp1 NA18956.hp1 NA18961.hp1 NA18965.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0150 a0001c0001t0001g0151 others(2): Show a0001c0001t0001g0135 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153	5	415	0.0121	-10	c.226 others(27): Show c.226+6858_226+6867delGCCTTGGATG	SCG5	ENSG00000166922.9	transcript	ENST00000300175.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCG5_chr15_32636710_32702092	32663032	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01496.hp2 NA19065.hp2 others(2): Show HG01106.hp1 HG01496.hp2 NA19065.hp2 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0237 a0001c0001t0001g0238 others(2): Show a0001c0001t0001g0059 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0298 a0001c0001t0001g0334	5	415	0.0121	-10	c.227 others(29): Show c.227-16696_227-16687delTATATATATA	SCG5	ENSG00000166922.9	transcript	ENST00000300175.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCG5_chr15_32636710_32702092	32672926	AAAAAAAA others(3): Show AAAAAAAAGAG	A A	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0131	1	415	0.0024	-10	c.227 others(27): Show c.227-6838_227-6829delAAAAAAGAGA	SCG5	ENSG00000166922.9	transcript	ENST00000300175.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCGB1C2_chr17_132569_144067	141002	AGGGGACA others(3): Show AGGGGACATGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG01175.hp1 HG01433.hp2 others(12): Show HG01081.hp2 HG01175.hp1 HG01433.hp2 HG01891.hp2 HG02004.hp2 HG02080.hp1 HG02129.hp2 HG02886.hp2 HG02896.hp2 HG03139.hp1 HG03453.hp1 HG03579.hp2 HG03654.hp2 NA18943.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0002c0002t0001 a0001c0001t0004 a0002c0002t0001	a0001c0001t0004g0003 a0002c0002t0001g0003 a0002c0002t0001g0023 others(2): Show a0001c0001t0004g0003 a0002c0002t0001g0003 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0025	15	402	0.0373	-10	c.20 others(21): Show c.2061_*2070delGGGGACATGG	SCGB1C2	ENSG00000268320.4	transcript	ENST00000595228.4	protein_coding		1936		chr17	TogoVar
SCGB1C2_chr17_132569_144067	141233	AGGGGACA others(3): Show AGGGGACATGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG02258.hp2 HG01884.hp2 HG02258.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0015 a0004c0004t0001g0015	2	402	0.0050	-10	c.22 others(21): Show c.2292_*2301delGGGGACATGG	SCGB1C2	ENSG00000268320.4	transcript	ENST00000595228.4	protein_coding		2167		chr17	TogoVar
SCGB1D4_chr11_62291281_62304075	62298010	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02056.hp2 NA18939.hp1 HG02056.hp2 NA18939.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	2	430	0.0047	-10	c.56- others(23): Show c.56-362_56-353delCACACACACA	SCGB1D4	ENSG00000197745.3	transcript	ENST00000358585.3	protein_coding	1/2			chr11	TogoVar
SCGB2A1_chr11_62203673_62218943	62209635	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00639.hp2 HG00673.hp1 others(33): Show HG00099.hp2 HG00639.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01106.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01255.hp1 HG01358.hp1 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01943.hp2 HG02004.hp2 HG02257.hp2 HG02300.hp2 HG02572.hp2 HG02683.hp1 HG03704.hp2 HG03710.hp2 HG04115.hp1 HG04204.hp1 HG04204.hp2 NA18952.hp2 NA18977.hp1 NA18999.hp2 NA19030.hp2 NA19240.hp2 NA20129.hp1 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0021 others(13): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0066 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093	36	442	0.0815	-10	c.56- others(23): Show c.56-744_56-735delGTGTGTGTGT	SCGB2A1	ENSG00000124939.6	transcript	ENST00000244930.6	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr11	TogoVar
SCGB2A1_chr11_62203673_62218943	62212947	CACACATA others(3): Show CACACATATGT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00639.hp2 HG00673.hp1 others(39): Show HG00099.hp2 HG00639.hp2 HG00673.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp2 HG01106.hp1 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01255.hp1 HG01258.hp1 HG01358.hp1 HG01433.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01943.hp2 HG02004.hp2 HG02257.hp2 HG02300.hp2 HG02683.hp1 HG03704.hp2 HG03710.hp2 HG04115.hp1 HG04204.hp1 HG04204.hp2 NA18948.hp1 NA18952.hp2 NA18977.hp1 NA18981.hp2 NA18983.hp1 NA18999.hp2 NA19065.hp2 NA19066.hp1 NA19086.hp2 NA20129.hp1 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0021 others(16): Show a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0028 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0116 a0001c0001t0001g0129 a0001c0001t0001g0177 a0001c0001t0001g0178	42	442	0.0950	-10	c.244 others(25): Show c.244-760_244-751delGTACACATAT	SCGB2A1	ENSG00000124939.6	transcript	ENST00000244930.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr11	TogoVar
SCGB2A1_chr11_62203673_62218943	62213000	GTACACAT others(3): Show GTACACATATA	G G	intron_variant intron_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0215 a0001c0001t0001g0215	1	442	0.0023	-10	c.244 others(25): Show c.244-724_244-715delACACATATAT	SCGB2A1	ENSG00000124939.6	transcript	ENST00000244930.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr11	TogoVar
SCGB2A1_chr11_62203673_62218943	62213069	TACATATA others(3): Show TACATATATAC	T T	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03041.hp2 HG03098.hp1 others(1): Show HG02922.hp2 HG03041.hp2 HG03098.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0072 a0001c0001t0001g0073 others(1): Show a0001c0001t0001g0067 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0078	4	442	0.0091	-10	c.244 others(25): Show c.244-637_244-628delCACATATATA	SCGB2A1	ENSG00000124939.6	transcript	ENST00000244930.6	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr11	TogoVar
SCGB2B2_chr19_34585644_34682159	34594652	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00423.hp2 HG00558.hp2 others(66): Show HG00099.hp1 HG00423.hp2 HG00558.hp2 HG00597.hp2 HG00621.hp1 HG00733.hp1 HG00733.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01109.hp2 HG01243.hp2 HG01993.hp2 HG02004.hp2 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp2 HG02132.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02683.hp1 HG03491.hp2 HG03492.hp1 HG03834.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18942.hp1 NA18945.hp1 NA18946.hp2 NA18951.hp2 NA18956.hp2 NA18957.hp1 NA18959.hp1 NA18960.hp2 NA18961.hp1 NA18964.hp1 NA18964.hp2 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18979.hp2 NA18983.hp2 NA18986.hp2 NA18988.hp2 NA18992.hp2 NA18993.hp1 NA18995.hp2 NA18999.hp1 NA19000.hp1 NA19001.hp1 NA19003.hp1 NA19004.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19065.hp1 NA19068.hp2 NA19077.hp2 NA19078.hp2 NA19079.hp1 NA19085.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0030 others(16): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0030 a0001c0001t0041 a0001c0001t0043 a0001c0001t0045 a0001c0001t0053 a0001c0001t0054 a0001c0001t0056 a0001c0001t0065 a0001c0001t0069 a0001c0001t0082 a0001c0001t0086 a0001c0001t0093 a0001c0001t0100 a0001c0001t0104 a0001c0001t0111 a0001c0001t0134 a0001c0001t0135	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(63): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0075 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0007g0118 a0001c0001t0007g0122 a0001c0001t0007g0125 a0001c0001t0007g0126 a0001c0001t0007g0134 a0001c0001t0007g0144 a0001c0001t0007g0164 a0001c0001t0007g0166 a0001c0001t0007g0167 a0001c0001t0007g0188 a0001c0001t0030g0234 a0001c0001t0030g0247 a0001c0001t0030g0257 a0001c0001t0041g0295 a0001c0001t0041g0299 a0001c0001t0043g0305 a0001c0001t0043g0306 a0001c0001t0045g0317 a0001c0001t0045g0319 a0001c0001t0053g0036 a0001c0001t0054g0071 a0001c0001t0056g0046 a0001c0001t0065g0049 a0001c0001t0069g0091 a0001c0001t0082g0179 a0001c0001t0086g0180 a0001c0001t0093g0212 a0001c0001t0100g0246 a0001c0001t0104g0269 a0001c0001t0111g0311 a0001c0001t0134g0356 a0001c0001t0135g0360	69	370	0.1865	-10	c.-99 others(17): Show c.-99_-90delACACACACAC	SCGB2B2	ENSG00000205209.8	transcript	ENST00000601241.6	protein_coding	2/4	90		chr19	TogoVar
SCGB2B2_chr19_34585644_34682159	34594829	CCTCCCTG others(3): Show CCTCCCTGGAG	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00609.hp1 HG02129.hp1 HG02896.hp1 others(10): Show HG00609.hp1 HG02129.hp1 HG02896.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp2 HG04184.hp2 NA18962.hp1 NA18990.hp2 NA19064.hp1 NA19065.hp2 NA19072.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0016 a0001c0001t0080 others(1): Show a0001c0001t0013 a0001c0001t0016 a0001c0001t0080 a0001c0001t0125	a0001c0001t0013g0102 a0001c0001t0013g0103 a0001c0001t0013g0104 others(10): Show a0001c0001t0013g0102 a0001c0001t0013g0103 a0001c0001t0013g0104 a0001c0001t0013g0106 a0001c0001t0013g0115 a0001c0001t0013g0116 a0001c0001t0016g0097 a0001c0001t0016g0110 a0001c0001t0016g0113 a0001c0001t0016g0123 a0001c0001t0016g0142 a0001c0001t0080g0117 a0001c0001t0125g0336	13	370	0.0351	-10	c.-27 others(19): Show c.-276_-267delCTCCAGGGAG	SCGB2B2	ENSG00000205209.8	transcript	ENST00000601241.6	protein_coding	2/4	267		chr19	TogoVar
SCGB2B2_chr19_34585644_34682159	34608660	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG01891.hp1 HG02257.hp2 others(7): Show HG01123.hp2 HG01891.hp1 HG02257.hp2 HG02615.hp1 HG02647.hp2 HG02895.hp1 HG02897.hp1 HG03540.hp2 NA19043.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0046 a0001c0001t0116 others(3): Show a0001c0001t0023 a0001c0001t0046 a0001c0001t0116 a0001c0001t0117 a0001c0001t0119 a0001c0001t0120	a0001c0001t0023g0009 a0001c0001t0023g0320 a0001c0001t0023g0322 others(5): Show a0001c0001t0023g0009 a0001c0001t0023g0320 a0001c0001t0023g0322 a0001c0001t0046g0010 a0001c0001t0116g0328 a0001c0001t0117g0321 a0001c0001t0119g0329 a0001c0001t0120g0323	10	370	0.0270	-10	c.-20 others(33): Show c.-2031-12076_-2031-12067delATATATATAT	SCGB2B2	ENSG00000205209.8	transcript	ENST00000601241.6	protein_coding	1/3			chr19	TogoVar
SCGB2B2_chr19_34585644_34682159	34612018	AATTCTTT others(3): Show AATTCTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0049	a0001c0001t0049g0332 a0001c0001t0049g0332	1	370	0.0027	-10	c.-20 others(33): Show c.-2031-15434_-2031-15425delAAAAAAGAAT	SCGB2B2	ENSG00000205209.8	transcript	ENST00000601241.6	protein_coding	1/3			chr19	TogoVar
SCGB2B2_chr19_34585644_34682159	34612022	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01123.hp2 HG01891.hp1 others(8): Show HG01109.hp1 HG01123.hp2 HG01891.hp1 HG02615.hp1 HG02647.hp1 HG02895.hp1 HG02897.hp1 HG03139.hp1 HG03540.hp2 NA19043.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0040 a0001c0001t0046 others(4): Show a0001c0001t0023 a0001c0001t0040 a0001c0001t0046 a0001c0001t0047 a0001c0001t0116 a0001c0001t0118 a0001c0001t0120	a0001c0001t0023g0009 a0001c0001t0023g0320 a0001c0001t0023g0322 others(6): Show a0001c0001t0023g0009 a0001c0001t0023g0320 a0001c0001t0023g0322 a0001c0001t0040g0210 a0001c0001t0046g0010 a0001c0001t0047g0326 a0001c0001t0116g0328 a0001c0001t0118g0327 a0001c0001t0120g0323	11	370	0.0297	-10	c.-20 others(33): Show c.-2031-15438_-2031-15429delAAAAAAAAAA	SCGB2B2	ENSG00000205209.8	transcript	ENST00000601241.6	protein_coding	1/3			chr19	TogoVar
SCGB2B2_chr19_34585644_34682159	34645531	CACAGACA others(3): Show CACAGACACAG	C C	intron_variant intron_variant	MODIFIER	NA18969.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0291 a0001c0001t0003g0291	1	370	0.0027	-10	c.-20 others(33): Show c.-2032+30089_-2032+30098delCTGTGTCTGT	SCGB2B2	ENSG00000205209.8	transcript	ENST00000601241.6	protein_coding	1/3			chr19	TogoVar
SCGB2B2_chr19_34585644_34682159	34645535	GACACAGA others(3): Show GACACAGACAC	G G	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02630.hp1 HG02523.hp2 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0102 a0001c0001t0049 a0001c0001t0102	a0001c0001t0049g0332 a0001c0001t0102g0268 a0001c0001t0049g0332 a0001c0001t0102g0268	2	370	0.0054	-10	c.-20 others(33): Show c.-2032+30085_-2032+30094delGTGTCTGTGT	SCGB2B2	ENSG00000205209.8	transcript	ENST00000601241.6	protein_coding	1/3			chr19	TogoVar
SCGB3A1_chr5_180585105_180596499	180595031	ATGTGTGG others(3): Show ATGTGTGGGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG02735.hp2 HG00642.hp2 HG02735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	470	0.0043	-10	c.-35 others(21): Show c.-3579_-3570delCACCCACACA	SCGB3A1	ENSG00000161055.4	transcript	ENST00000292641.4	protein_coding		3533		chr5	TogoVar
SCGN_chr6_25647215_25706783	25658003	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01517.hp2 HG03195.hp2 HG03834.hp1 others(4): Show HG01517.hp2 HG03195.hp2 HG03834.hp1 NA19006.hp1 NA19006.hp2 NA19056.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0150 others(4): Show a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0003g0084 a0001c0001t0003g0159 a0001c0001t0003g0160	7	368	0.0190	-10	c.154 others(27): Show c.154-3504_154-3495delTTTTTTTTTT	SCGN	ENSG00000079689.15	transcript	ENST00000377961.3	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCHIP1_chr3_159268244_159902359	159295267	AAAAAAAA others(3): Show AAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0059 a0001c0001t0004g0059	1	100	0.0100	-10	c.63+ others(27): Show c.63+21387_63+21396delAAAAAAACAA	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159432286	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp2 HG01891.hp2 others(6): Show HG01243.hp1 HG01243.hp2 HG01891.hp2 HG02976.hp2 HG03130.hp1 HG03195.hp1 HG03471.hp2 NA19240.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 others(6): Show a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0087 a0001c0002t0001g0017 a0001c0002t0001g0024 a0001c0002t0001g0033 a0001c0002t0001g0085 a0001c0002t0001g0086	9	100	0.0900	-10	c.63+ others(29): Show c.63+158448_63+158457delTGTGTGTGTG	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159432331	TGTGTGTG others(3): Show TGTGTGTGTGA	T T	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02897.hp2 HG02922.hp2 others(3): Show HG02723.hp1 HG02897.hp2 HG02922.hp2 HG03195.hp2 HG03486.hp2 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 others(3): Show a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0056 a0002c0003t0001g0034	6	100	0.0600	-10	c.63+ others(29): Show c.63+158450_63+158459delTGTGTGTGAG	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159432337	TGTGAGAG others(3): Show TGTGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG02572.hp2 HG01978.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0065 a0001c0001t0001g0025 a0001c0001t0001g0065	2	100	0.0200	-10	c.63+ others(29): Show c.63+158456_63+158465delTGAGAGAGAG	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159553967	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02698.hp2 NA18747.hp1 NA19058.hp2 HG02698.hp2 NA18747.hp1 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0062 a0001c0001t0001g0002 a0001c0001t0001g0011 a0001c0001t0001g0062	3	100	0.0300	-10	c.64- others(29): Show c.64-210433_64-210424delGTGTGTGTGT	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159554010	GTGTGTGT others(3): Show GTGTGTGTGTT	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0038	1	100	0.0100	-10	c.64- others(29): Show c.64-210427_64-210418delGTGTTTGTGT	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159554016	GTGTTTGT others(3): Show GTGTTTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02572.hp1 NA19043.hp2 HG02572.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0027 a0001c0002t0001g0057 a0001c0001t0001g0027 a0001c0002t0001g0057	2	100	0.0200	-10	c.64- others(29): Show c.64-210423_64-210414delTTGTGTATGT	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159596885	CATGTATA others(3): Show CATGTATACAT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02451.hp2 HG02486.hp1 others(9): Show HG01255.hp1 HG02451.hp2 HG02486.hp1 HG02717.hp2 HG02897.hp1 HG02965.hp1 HG03139.hp1 HG03579.hp2 NA18906.hp1 NA19043.hp1 NA20300.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0001t0001 a0001c0002t0001 a0001c0004t0001	a0001c0001t0001g0036 a0001c0001t0001g0044 a0001c0001t0001g0050 others(9): Show a0001c0001t0001g0036 a0001c0001t0001g0044 a0001c0001t0001g0050 a0001c0001t0001g0094 a0001c0002t0001g0022 a0001c0002t0001g0039 a0001c0002t0001g0051 a0001c0002t0001g0054 a0001c0002t0001g0058 a0001c0002t0001g0074 a0001c0002t0001g0079 a0001c0004t0001g0018	12	100	0.1200	-10	c.64- others(29): Show c.64-167552_64-167543delTACATATGTA	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159626091	TAGATAGA others(3): Show TAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02723.hp2 HG02897.hp1 others(1): Show HG01255.hp1 HG02723.hp2 HG02897.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0038 a0001c0001t0001g0044 a0001c0001t0001g0071 others(1): Show a0001c0001t0001g0038 a0001c0001t0001g0044 a0001c0001t0001g0071 a0001c0002t0001g0022	4	100	0.0400	-10	c.64- others(29): Show c.64-138350_64-138341delGATAGATAGA	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159637371	CCACACAC others(3): Show CCACACACACA	C C	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0061 a0001c0002t0001g0061	1	100	0.0100	-10	c.64- others(29): Show c.64-127030_64-127021delACACACACAC	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159665546	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	NA19058.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	100	0.0100	-10	c.64- others(27): Show c.64-98879_64-98870delGTGTGTGTGT	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159681917	AGGTTAAC others(3): Show AGGTTAACTTG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03579.hp2 HG01243.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0087 a0001c0004t0001g0018 a0001c0001t0001g0087 a0001c0004t0001g0018	2	100	0.0200	-10	c.64- others(27): Show c.64-82507_64-82498delTGGGTTAACT	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159704882	TTCTTTCT others(3): Show TTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0092 a0001c0002t0001g0092	1	100	0.0100	-10	c.64- others(27): Show c.64-59559_64-59550delCTTTCTTTCT	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159713223	AGAAAGAA others(3): Show AGAAAGAAAGG	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0057 a0001c0002t0001g0057	1	100	0.0100	-10	c.64- others(27): Show c.64-51219_64-51210delGAAAGAAAGG	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7			chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159750294	TATACACA others(3): Show TATACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02735.hp2 NA19058.hp1 HG02735.hp2 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0007 a0001c0002t0001g0092 a0001c0001t0001g0007 a0001c0002t0001g0092	2	100	0.0200	-10	c.64- others(27): Show c.64-14147_64-14138delTACACACACA	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159763956	GGGGCCGG others(3): Show GGGGCCGGGCC	G G	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0080 a0001c0001t0005g0080	1	100	0.0100	-10	c.64- others(23): Show c.64-473_64-464delCCGGGCCGGG	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159776332	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00642.hp2 others(46): Show HG00438.hp1 HG00438.hp2 HG00642.hp2 HG01106.hp1 HG01169.hp1 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01433.hp2 HG01884.hp1 HG01978.hp1 HG02027.hp1 HG02055.hp2 HG02145.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp1 HG02897.hp2 HG02922.hp1 HG02976.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp2 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA19007.hp1 NA19007.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19058.hp2 NA19240.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0004 a0003c0005t0001 a0001c0001t0001 a0001c0001t0004 a0003c0005t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 others(46): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0004g0059 a0003c0005t0001g0053	49	100	0.4900	-10	c.759 others(29): Show c.759+11207_759+11216delTTTTTTTTTT	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCHIP1_chr3_159268244_159902359	159786666	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp2 HG01243.hp2 others(19): Show HG01167.hp2 HG01169.hp2 HG01243.hp2 HG01433.hp1 HG01891.hp2 HG02055.hp1 HG02145.hp2 HG02486.hp1 HG02572.hp1 HG02622.hp2 HG02717.hp2 HG02735.hp2 HG02897.hp1 HG02965.hp1 HG03130.hp1 HG03139.hp1 HG03225.hp2 NA19030.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0001 a0001c0002t0003	a0001c0002t0001g0017 a0001c0002t0001g0022 a0001c0002t0001g0024 others(19): Show a0001c0002t0001g0017 a0001c0002t0001g0022 a0001c0002t0001g0024 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0039 a0001c0002t0001g0048 a0001c0002t0001g0051 a0001c0002t0001g0054 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0061 a0001c0002t0001g0074 a0001c0002t0001g0079 a0001c0002t0001g0082 a0001c0002t0001g0084 a0001c0002t0001g0085 a0001c0002t0001g0092 a0001c0002t0003g0083	22	100	0.2200	-10	c.759 others(29): Show c.759+21549_759+21558delGTGTGTGTGT	SCHIP1	ENSG00000283154.3	transcript	ENST00000638749.2	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr3	TogoVar
SCIMP_chr17_5203920_5239860	5217380	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0047 a0001c0002t0002g0047	1	386	0.0026	-10	c.210 others(27): Show c.210-2392_210-2383delCACACACACA	SCIMP	ENSG00000161929.15	transcript	ENST00000574081.6	protein_coding	3/4			chr17	TogoVar
SCIMP_chr17_5203920_5239860	5220432	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19086.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0276 a0001c0001t0001g0276	1	386	0.0026	-10	c.209 others(25): Show c.209+845_209+854delTTTTTTTTTT	SCIMP	ENSG00000161929.15	transcript	ENST00000574081.6	protein_coding	3/4			chr17	TogoVar
SCIMP_chr17_5203920_5239860	5227679	GTCCGGCT others(3): Show GTCCGGCTTGA	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0310 a0001c0003t0005g0310	1	386	0.0026	-10	c.22- others(25): Show c.22-4233_22-4224delTCAAGCCGGA	SCIMP	ENSG00000161929.15	transcript	ENST00000574081.6	protein_coding	1/4			chr17	TogoVar
SCIMP_chr17_5203920_5239860	5238193	GCTCACTG others(3): Show GCTCACTGCAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0144 a0001c0001t0001g0144	1	386	0.0026	-10	c.-34 others(21): Show c.-3448_-3439delTTGCAGTGAG	SCIMP	ENSG00000161929.15	transcript	ENST00000574081.6	protein_coding		3334		chr17	TogoVar
SCIN_chr7_12565720_12665182	12566611	GTTTGTTT others(3): Show GTTTGTTTTGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0052 a0001c0001t0052	a0001c0001t0052g0350 a0001c0001t0052g0350	1	372	0.0027	-10	c.-41 others(21): Show c.-4175_-4166delTTTGTTTTGT	SCIN	ENSG00000006747.15	transcript	ENST00000297029.10	protein_coding		4108		chr7	TogoVar
SCIN_chr7_12565720_12665182	12569183	GACACACA others(3): Show GACACACACAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00738.hp2 others(26): Show HG00099.hp1 HG00408.hp1 HG00738.hp2 HG00741.hp1 HG01167.hp1 HG01175.hp1 HG01255.hp2 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01496.hp2 HG01978.hp1 HG02015.hp2 HG02055.hp1 HG02132.hp1 HG02809.hp2 HG02896.hp1 HG03669.hp1 HG03710.hp2 HG03927.hp1 HG04184.hp2 NA18939.hp1 NA18968.hp2 NA18975.hp1 NA19007.hp1 NA19062.hp2 NA19074.hp1 NA19090.hp2 NA19091.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0002c0019 others(1): Show a0001c0001 a0002c0003 a0002c0019 a0004c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(25): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0031 a0001c0001t0036 a0001c0001t0047 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0057 a0001c0001t0068 a0001c0001t0083 a0001c0001t0100 a0001c0001t0104 a0001c0001t0106 a0001c0001t0143 a0001c0001t0157 a0001c0001t0199 a0001c0001t0230 a0001c0001t0249 a0001c0001t0262 a0002c0003t0064 a0002c0019t0066 a0004c0005t0051	a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0002g0052 others(26): Show a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0002g0052 a0001c0001t0005g0049 a0001c0001t0020g0013 a0001c0001t0022g0045 a0001c0001t0023g0046 a0001c0001t0031g0018 a0001c0001t0036g0011 a0001c0001t0047g0051 a0001c0001t0053g0344 a0001c0001t0054g0348 a0001c0001t0055g0345 a0001c0001t0056g0346 a0001c0001t0057g0349 a0001c0001t0068g0044 a0001c0001t0083g0050 a0001c0001t0100g0014 a0001c0001t0104g0042 a0001c0001t0106g0053 a0001c0001t0143g0048 a0001c0001t0157g0056 a0001c0001t0199g0017 a0001c0001t0230g0010 a0001c0001t0249g0055 a0001c0001t0262g0012 a0002c0003t0064g0356 a0002c0019t0066g0355 a0004c0005t0051g0347	29	372	0.0780	-10	c.-16 others(21): Show c.-1603_-1594delACACACACAC	SCIN	ENSG00000006747.15	transcript	ENST00000297029.10	protein_coding		1536		chr7	TogoVar
SCIN_chr7_12565720_12665182	12628030	CGCGTGTG others(3): Show CGCGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02970.hp2 HG03130.hp1 others(5): Show HG02886.hp1 HG02970.hp2 HG03130.hp1 HG03453.hp2 HG03540.hp1 NA18906.hp1 NA19043.hp2 NA20300.hp1	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0002c0002 a0002c0003 others(1): Show a0001c0001 a0002c0002 a0002c0003 a0008c0009	a0001c0001t0041 a0001c0001t0228 a0001c0001t0266 others(5): Show a0001c0001t0041 a0001c0001t0228 a0001c0001t0266 a0002c0002t0007 a0002c0002t0049 a0002c0002t0118 a0002c0003t0015 a0008c0009t0003	a0001c0001t0041g0197 a0001c0001t0228g0199 a0001c0001t0266g0198 others(5): Show a0001c0001t0041g0197 a0001c0001t0228g0199 a0001c0001t0266g0198 a0002c0002t0007g0280 a0002c0002t0049g0247 a0002c0002t0118g0279 a0002c0003t0015g0065 a0008c0009t0003g0243	8	372	0.0215	-10	c.119 others(29): Show c.1198-1069_1198-1060delCGTGTGTGTG	SCIN	ENSG00000006747.15	transcript	ENST00000297029.10	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr7	TogoVar

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