view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TLN2_chr15_62385550_62849631 | 62812011 | CAATAAAT others(5): Show |
C | intron_variant | MODIFIER | NA18906.hp2 | a0002 | a0002c0033 | a0002c0033t0006 | a0002c0033t0006g0059 | 1 | 144 | 0.0069 | -12 | c.677 others(31): Show |
TLN2 | ENSG00000171914.17 | transcript | ENST00000636159.2 | protein_coding | 52/58 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
TLN2_chr15_62385550_62849631 | 62815177 | TCACACAC others(5): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG02451.hp2 HG03453.hp2 others(2): Show |
a0001a0002 | a0001c0002a0001c0004a0001c0006others(2): Show | a0001c0002t0025a0001c0004t0005a0001c0006t0005others(2): Show | a0001c0002t0025g0004 a0001c0004t0005g0117 a0001c0006t0005g0089 others(2): Show |
5 | 144 | 0.0347 | -12 | c.677 others(31): Show |
TLN2 | ENSG00000171914.17 | transcript | ENST00000636159.2 | protein_coding | 52/58 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
TLN2_chr15_62385550_62849631 | 62815221 | ACACACAC others(5): Show |
A | intron_variant | MODIFIER | HG02004.hp2 HG02647.hp2 |
a0002 | a0002c0009a0002c0062 | a0002c0009t0006a0002c0062t0001 | a0002c0009t0006g0093 a0002c0062t0001g0076 |
2 | 144 | 0.0139 | -12 | c.677 others(31): Show |
TLN2 | ENSG00000171914.17 | transcript | ENST00000636159.2 | protein_coding | 52/58 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
TLR10_chr4_38767238_38787990 | 38770755 | TCCTATAT others(5): Show |
T | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG01261.hp1 others(30): Show |
a0003a0006 | a0003c0003a0006c0007 | a0003c0003t0004a0003c0003t0005a0003c0003t0008others(5): Show | a0003c0003t0004g0049 a0003c0003t0004g0051 a0003c0003t0004g0131 others(17): Show |
33 | 438 | 0.0753 | -12 | c.*23 others(23): Show |
TLR10 | ENSG00000174123.11 | transcript | ENST00000308973.9 | protein_coding | 1482 | chr4 | TogoVar | |||||||
TLR1_chr4_38791255_38809791 | 38806610 | AAAATAAA others(5): Show |
A | upstream_gene_variant | MODIFIER | HG00741.hp1 HG01884.hp2 HG02258.hp1 others(9): Show |
a0001a0006a0007others(2): Show | a0001c0001a0006c0009a0007c0007others(2): Show | a0001c0001t0001a0006c0009t0004a0007c0007t0001others(2): Show | a0001c0001t0001g0009 a0001c0001t0001g0062 a0001c0001t0001g0082 others(4): Show |
12 | 446 | 0.0269 | -12 | c.-21 others(23): Show |
TLR1 | ENSG00000174125.8 | transcript | ENST00000308979.7 | protein_coding | 1820 | chr4 | TogoVar | |||||||
TLR1_chr4_38791255_38809791 | 38806813 | TCTACCCC others(5): Show |
T | upstream_gene_variant | MODIFIER | HG01109.hp1 HG01243.hp1 HG01257.hp2 others(54): Show |
a0001a0005a0015others(1): Show | a0001c0001a0005c0006a0015c0030others(1): Show | a0001c0001t0001a0005c0006t0001a0015c0030t0001others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0025 a0001c0001t0001g0037 others(7): Show |
57 | 446 | 0.1278 | -12 | c.-23 others(23): Show |
TLR1 | ENSG00000174125.8 | transcript | ENST00000308979.7 | protein_coding | 2023 | chr4 | TogoVar | |||||||
TLR2_chr4_153679280_153711260 | 153702762 | TTGTGTGT others(5): Show |
T | intron_variant | MODIFIER | HG02886.hp1 | a0001 | a0001c0010 | a0001c0010t0001 | a0001c0010t0001g0128 | 1 | 432 | 0.0023 | -12 | c.-16 others(25): Show |
TLR2 | ENSG00000137462.9 | transcript | ENST00000642700.2 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
TLR5_chr1_223104404_223148248 | 223130003 | CCTTTTAT others(5): Show |
C | intron_variant | MODIFIER | NA20129.hp2 | a0002 | a0002c0017 | a0002c0017t0027 | a0002c0017t0027g0036 | 1 | 368 | 0.0027 | -12 | c.-5+ others(27): Show |
TLR5 | ENSG00000187554.14 | transcript | ENST00000642603.2 | protein_coding | 5/5 | chr1 | TogoVar | |||||||
TLR5_chr1_223104404_223148248 | 223141784 | CATATATA others(5): Show |
C | intron_variant | MODIFIER | HG00558.hp1 HG00558.hp2 HG01192.hp2 others(1): Show |
a0001a0003 | a0001c0001a0001c0006a0003c0003 | a0001c0001t0001a0001c0006t0001a0003c0003t0001 | a0001c0001t0001g0293 a0001c0006t0001g0321 a0003c0003t0001g0294 others(1): Show |
4 | 368 | 0.0109 | -12 | c.-55 others(27): Show |
TLR5 | ENSG00000187554.14 | transcript | ENST00000642603.2 | protein_coding | 1/5 | chr1 | TogoVar | |||||||
TLR5_chr1_223104404_223148248 | 223141818 | TATATAGA others(5): Show |
T | intron_variant | MODIFIER | HG03017.hp2 NA19091.hp2 |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0002a0003c0003t0009 | a0002c0002t0002g0070 a0003c0003t0009g0175 |
2 | 368 | 0.0054 | -12 | c.-55 others(27): Show |
TLR5 | ENSG00000187554.14 | transcript | ENST00000642603.2 | protein_coding | 1/5 | chr1 | TogoVar | |||||||
TLR5_chr1_223104404_223148248 | 223147276 | AAAAGACA others(5): Show |
A | upstream_gene_variant | MODIFIER | NA19066.hp2 | a0007 | a0007c0009 | a0007c0009t0001 | a0007c0009t0001g0309 | 1 | 368 | 0.0027 | -12 | c.-46 others(23): Show |
TLR5 | ENSG00000187554.14 | transcript | ENST00000642603.2 | protein_coding | 4029 | chr1 | TogoVar | |||||||
TLR6_chr4_38817897_38861817 | 38858780 | AGAGAGAG others(5): Show |
A | upstream_gene_variant | MODIFIER | HG02145.hp1 HG02258.hp1 |
a0005a0009 | a0005c0007a0009c0011 | a0005c0007t0008a0009c0011t0054 | a0005c0007t0008g0168 a0009c0011t0054g0169 |
2 | 408 | 0.0049 | -12 | c.-20 others(23): Show |
TLR6 | ENSG00000174130.13 | transcript | ENST00000508254.6 | protein_coding | 1964 | chr4 | TogoVar | |||||||
TLR6_chr4_38817897_38861817 | 38858829 | GAGGAAGA others(5): Show |
G | upstream_gene_variant | MODIFIER | NA19009.hp1 | a0004 | a0004c0006 | a0004c0006t0001 | a0004c0006t0001g0016 | 1 | 408 | 0.0025 | -12 | c.-21 others(23): Show |
TLR6 | ENSG00000174130.13 | transcript | ENST00000508254.6 | protein_coding | 2013 | chr4 | TogoVar | |||||||
TLR6_chr4_38817897_38861817 | 38858832 | GAAGAAAG others(5): Show |
G | upstream_gene_variant | MODIFIER | HG01978.hp1 NA19076.hp1 |
a0001a0004 | a0001c0001a0004c0006 | a0001c0001t0004a0004c0006t0001 | a0001c0001t0004g0022 a0004c0006t0001g0016 |
2 | 408 | 0.0049 | -12 | c.-21 others(23): Show |
TLR6 | ENSG00000174130.13 | transcript | ENST00000508254.6 | protein_coding | 2016 | chr4 | TogoVar | |||||||
TLR6_chr4_38817897_38861817 | 38858877 | AAGAAAGA others(5): Show |
A | upstream_gene_variant | MODIFIER | HG01074.hp2 HG01975.hp1 HG02004.hp2 others(16): Show |
a0001a0011 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0052others(8): Show | a0001c0001t0001g0049 a0001c0001t0004g0028 a0001c0001t0052g0186 others(11): Show |
19 | 408 | 0.0466 | -12 | c.-21 others(23): Show |
TLR6 | ENSG00000174130.13 | transcript | ENST00000508254.6 | protein_coding | 2061 | chr4 | TogoVar | |||||||
TLX1_chr10_101126300_101142789 | 101138043 | TCGTGTGT others(5): Show |
T | downstream_gene_variant | MODIFIER | HG00423.hp2 HG00597.hp2 HG00673.hp1 others(40): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0023 a0001c0001t0001g0036 others(1): Show |
43 | 468 | 0.0919 | -12 | c.*11 others(23): Show |
TLX1 | ENSG00000107807.13 | transcript | ENST00000370196.11 | protein_coding | 255 | chr10 | TogoVar | |||||||
TLX3_chr5_171304248_171317139 | 171313352 | TTCTCTCT others(5): Show |
T | downstream_gene_variant | MODIFIER | HG01884.hp1 HG02647.hp1 HG03834.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0002g0010 |
4 | 402 | 0.0100 | -12 | c.*17 others(23): Show |
TLX3 | ENSG00000164438.6 | transcript | ENST00000296921.6 | protein_coding | 1214 | chr5 | TogoVar | |||||||
TM2D1_chr1_61676046_61730141 | 61703718 | TTATATAT others(5): Show |
T | intron_variant | MODIFIER | HG00735.hp1 HG01070.hp2 HG01071.hp1 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004 | a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0292 others(17): Show |
20 | 388 | 0.0516 | -12 | c.348 others(29): Show |
TM2D1 | ENSG00000162604.13 | transcript | ENST00000606498.5 | protein_coding | 3/6 | chr1 | TogoVar | |||||||
TM2D1_chr1_61676046_61730141 | 61706834 | AAAAGAAA others(5): Show |
A | intron_variant | MODIFIER | HG02615.hp1 HG02818.hp1 HG03471.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0004a0002c0002t0004 | a0001c0001t0004g0283 a0001c0001t0004g0284 a0002c0002t0004g0015 |
3 | 388 | 0.0077 | -12 | c.347 others(29): Show |
TM2D1 | ENSG00000162604.13 | transcript | ENST00000606498.5 | protein_coding | 3/6 | chr1 | TogoVar | |||||||
TM2D1_chr1_61676046_61730141 | 61710483 | CACACACA others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp1 HG01106.hp1 others(37): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 others(37): Show |
40 | 388 | 0.1031 | -12 | c.239 others(29): Show |
TM2D1 | ENSG00000162604.13 | transcript | ENST00000606498.5 | protein_coding | 2/6 | chr1 | TogoVar | |||||||
TM2D1_chr1_61676046_61730141 | 61710503 | TACACACA others(5): Show |
T | intron_variant | MODIFIER | HG02572.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0051 | 1 | 388 | 0.0026 | -12 | c.239 others(29): Show |
TM2D1 | ENSG00000162604.13 | transcript | ENST00000606498.5 | protein_coding | 2/6 | chr1 | TogoVar | |||||||
TM4SF18_chr3_149313498_149338636 | 149317722 | TTTTGTTT others(5): Show |
T | downstream_gene_variant | MODIFIER | HG01243.hp1 HG01243.hp2 HG01891.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0175 a0001c0001t0007g0025 a0001c0001t0007g0150 others(1): Show |
6 | 442 | 0.0136 | -12 | c.*37 others(23): Show |
TM4SF18 | ENSG00000163762.7 | transcript | ENST00000296059.7 | protein_coding | 775 | chr3 | TogoVar | |||||||
TM4SF18_chr3_149313498_149338636 | 149334430 | AAAAGAAA others(5): Show |
A | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00597.hp1 HG00609.hp1 others(142): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0007 others(77): Show |
145 | 442 | 0.3281 | -12 | c.-94 others(21): Show |
TM4SF18 | ENSG00000163762.7 | transcript | ENST00000296059.7 | protein_coding | 795 | chr3 | TogoVar | |||||||
TM4SF19_chr3_196318547_196343388 | 196320979 | CTTTTTTT others(5): Show |
C | downstream_gene_variant | MODIFIER | HG02723.hp1 HG03516.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0145 a0001c0001t0001g0176 |
2 | 370 | 0.0054 | -12 | c.*28 others(23): Show |
TM4SF19 | ENSG00000145107.16 | transcript | ENST00000273695.4 | protein_coding | 2567 | chr3 | TogoVar | |||||||
TM4SF20_chr2_227357038_227384306 | 227366716 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG02523.hp2 NA18946.hp2 NA18957.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 others(1): Show |
4 | 470 | 0.0085 | -12 | c.250 others(27): Show |
TM4SF20 | ENSG00000168955.4 | transcript | ENST00000304568.4 | protein_coding | 2/3 | chr2 | TogoVar | |||||||
TM4SF20_chr2_227357038_227384306 | 227374088 | TAAAAAAA others(5): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG02559.hp1 HG02886.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0314 a0001c0001t0003g0315 a0001c0001t0003g0316 others(2): Show |
5 | 470 | 0.0106 | -12 | c.184 others(29): Show |
TM4SF20 | ENSG00000168955.4 | transcript | ENST00000304568.4 | protein_coding | 1/3 | chr2 | TogoVar | |||||||
TM4SF5_chr17_4766886_4788211 | 4769734 | AAACATCA others(5): Show |
A | upstream_gene_variant | MODIFIER | NA19058.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010 | 1 | 454 | 0.0022 | -12 | c.-21 others(23): Show |
TM4SF5 | ENSG00000142484.7 | transcript | ENST00000270560.4 | protein_coding | 2151 | chr17 | TogoVar | |||||||
TM4SF5_chr17_4766886_4788211 | 4785234 | AAATAAAT others(5): Show |
A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(154): Show |
a0001 | a0001c0002a0001c0003a0001c0004others(1): Show | a0001c0002t0002a0001c0003t0001a0001c0004t0002others(1): Show | a0001c0002t0002g0002 a0001c0002t0002g0008 a0001c0002t0002g0009 others(59): Show |
157 | 454 | 0.3458 | -12 | c.*21 others(23): Show |
TM4SF5 | ENSG00000142484.7 | transcript | ENST00000270560.4 | protein_coding | 2024 | chr17 | TogoVar | |||||||
TM6SF1_chr15_83102645_83142408 | 83118230 | TACACACA others(5): Show |
T | intron_variant | MODIFIER | HG02698.hp1 HG02738.hp2 HG03491.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0027 a0001c0001t0001g0042 a0001c0001t0001g0043 others(1): Show |
5 | 290 | 0.0172 | -12 | c.295 others(29): Show |
TM6SF1 | ENSG00000136404.16 | transcript | ENST00000322019.14 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
TM6SF2_chr19_19259366_19278301 | 19265395 | TATCTATC others(5): Show |
T | intron_variant | MODIFIER | HG04204.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0214 | 1 | 396 | 0.0025 | -12 | c.925 others(27): Show |
TM6SF2 | ENSG00000213996.13 | transcript | ENST00000389363.5 | protein_coding | 9/9 | chr19 | TogoVar | |||||||
TM7SF3_chr12_26966579_27019384 | 26985621 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG03471.hp2 HG04204.hp1 HG06807.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0005a0001c0001t0006others(1): Show | a0001c0001t0003g0077 a0001c0001t0005g0104 a0001c0001t0006g0066 others(2): Show |
5 | 430 | 0.0116 | -12 | c.869 others(29): Show |
TM7SF3 | ENSG00000064115.11 | transcript | ENST00000343028.9 | protein_coding | 6/11 | chr12 | TogoVar | |||||||
TM9SF2_chr13_99496472_99569048 | 99539210 | AAAAAAAA others(5): Show |
A | intron_variant | MODIFIER | HG01106.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0221 | 1 | 332 | 0.0030 | -12 | c.717 others(27): Show |
TM9SF2 | ENSG00000125304.10 | transcript | ENST00000376387.5 | protein_coding | 6/16 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
TM9SF4_chr20_32104714_32172256 | 32118601 | GTATTTAT others(5): Show |
G | intron_variant | MODIFIER | HG00735.hp1 HG00741.hp1 HG01069.hp1 others(71): Show |
a0001a0003a0005others(2): Show | a0001c0001a0001c0004a0001c0012others(5): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(11): Show | a0001c0001t0001g0005 a0001c0001t0001g0075 a0001c0001t0001g0076 others(71): Show |
74 | 298 | 0.2483 | -12 | c.15+ others(27): Show |
TM9SF4 | ENSG00000101337.16 | transcript | ENST00000398022.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TM9SF4_chr20_32104714_32172256 | 32123199 | GGGGGGAG others(5): Show |
G | intron_variant | MODIFIER | NA19084.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0240 | 1 | 298 | 0.0034 | -12 | c.16- others(27): Show |
TM9SF4 | ENSG00000101337.16 | transcript | ENST00000398022.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TM9SF4_chr20_32104714_32172256 | 32126068 | AACACACA others(5): Show |
A | intron_variant | MODIFIER | HG02818.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0206 | 1 | 298 | 0.0034 | -12 | c.16- others(27): Show |
TM9SF4 | ENSG00000101337.16 | transcript | ENST00000398022.7 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TM9SF4_chr20_32104714_32172256 | 32161468 | CCCAGAAT others(5): Show |
C | intron_variant | MODIFIER | HG01071.hp1 | a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0248 | 1 | 298 | 0.0034 | -12 | c.177 others(29): Show |
TM9SF4 | ENSG00000101337.16 | transcript | ENST00000398022.7 | protein_coding | 17/17 | chr20 | TogoVar | |||||||
TM9SF4_chr20_32104714_32172256 | 32163260 | AAAAAAAA others(5): Show |
A | intron_variant | MODIFIER | HG02145.hp2 HG02717.hp1 HG03453.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0064 a0001c0001t0003g0278 a0001c0001t0003g0279 others(1): Show |
4 | 298 | 0.0134 | -12 | c.177 others(31): Show |
TM9SF4 | ENSG00000101337.16 | transcript | ENST00000398022.7 | protein_coding | 17/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TM9SF4_chr20_32104714_32172256 | 32163262 | AAAAAAAA others(5): Show |
A | intron_variant | MODIFIER | HG01952.hp1 HG01978.hp1 HG02027.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0083 others(3): Show |
6 | 298 | 0.0201 | -12 | c.177 others(31): Show |
TM9SF4 | ENSG00000101337.16 | transcript | ENST00000398022.7 | protein_coding | 17/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TM9SF4_chr20_32104714_32172256 | 32163264 | AAAAAATA others(5): Show |
A | intron_variant | MODIFIER | HG04199.hp1 NA18969.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0069 a0001c0001t0001g0080 |
2 | 298 | 0.0067 | -12 | c.177 others(31): Show |
TM9SF4 | ENSG00000101337.16 | transcript | ENST00000398022.7 | protein_coding | 17/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TM9SF4_chr20_32104714_32172256 | 32163266 | AAAATATA others(5): Show |
A | intron_variant | MODIFIER | HG01243.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0085 | 1 | 298 | 0.0034 | -12 | c.177 others(31): Show |
TM9SF4 | ENSG00000101337.16 | transcript | ENST00000398022.7 | protein_coding | 17/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TMBIM4_chr12_66130846_66174996 | 66133918 | GTCTCCCT others(5): Show |
G | downstream_gene_variant | MODIFIER | HG03130.hp2 | a0002 | a0002c0002 | a0002c0002t0009 | a0002c0002t0009g0139 | 1 | 352 | 0.0028 | -12 | c.*40 others(23): Show |
TMBIM4 | ENSG00000155957.19 | transcript | ENST00000358230.8 | protein_coding | 1927 | chr12 | TogoVar | |||||||
TMC1_chr9_72516608_72843297 | 72570230 | AGTGTGTG others(5): Show |
A | intron_variant | MODIFIER | HG01978.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0065 | 1 | 182 | 0.0055 | -12 | c.-42 others(31): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TMC1_chr9_72516608_72843297 | 72609179 | CCCTTCCT others(5): Show |
C | intron_variant | MODIFIER | HG00323.hp1 HG03098.hp1 NA19056.hp1 |
a0001 | a0001c0003a0001c0004 | a0001c0003t0006a0001c0003t0030a0001c0004t0010 | a0001c0003t0006g0120 a0001c0003t0030g0175 a0001c0004t0010g0116 |
3 | 182 | 0.0165 | -12 | c.-30 others(31): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TMC1_chr9_72516608_72843297 | 72617908 | GGTGTGTG others(5): Show |
G | intron_variant | MODIFIER | HG01496.hp1 HG02055.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0034a0001c0003t0037 | a0001c0001t0034g0093 a0001c0003t0037g0019 |
2 | 182 | 0.0110 | -12 | c.-19 others(31): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 3/23 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TMC1_chr9_72516608_72843297 | 72683731 | TTTTATAT others(5): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG01070.hp1 HG01099.hp2 others(3): Show |
a0001 | a0001c0004a0001c0005 | a0001c0004t0008a0001c0004t0010a0001c0005t0010 | a0001c0004t0008g0004 a0001c0004t0008g0009 a0001c0004t0008g0010 others(3): Show |
6 | 182 | 0.0330 | -12 | c.17- others(27): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 5/23 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TMC1_chr9_72516608_72843297 | 72693760 | TTAATTAT others(5): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(114): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0004others(3): Show | a0001c0001t0003a0001c0001t0006a0001c0001t0012others(32): Show | a0001c0001t0003g0001 a0001c0001t0006g0099 a0001c0001t0012g0103 others(114): Show |
117 | 182 | 0.6429 | -12 | c.65- others(25): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 6/23 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TMC1_chr9_72516608_72843297 | 72725325 | GTATATAT others(5): Show |
G | intron_variant | MODIFIER | HG02109.hp1 HG02572.hp1 |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0072 a0001c0003t0001g0073 |
2 | 182 | 0.0110 | -12 | c.363 others(31): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TMC1_chr9_72516608_72843297 | 72814896 | TTGTGTGT others(5): Show |
T | intron_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0003 | a0001c0003t0033 | a0001c0003t0033g0094 | 1 | 182 | 0.0055 | -12 | c.169 others(31): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 18/23 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TMC1_chr9_72516608_72843297 | 72822514 | TTGTGTGT others(5): Show |
T | intron_variant | MODIFIER | HG02976.hp1 NA19030.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0006a0001c0003t0033 | a0001c0001t0006g0099 a0001c0003t0033g0094 |
2 | 182 | 0.0110 | -12 | c.200 others(31): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 20/23 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
TMC1_chr9_72516608_72843297 | 72842375 | CGGAGAGG others(5): Show |
C | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00621.hp2 HG00735.hp2 others(22): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0012others(9): Show | a0001c0001t0002g0142 a0001c0001t0004g0033 a0001c0001t0004g0034 others(22): Show |
25 | 182 | 0.1374 | -12 | c.*64 others(23): Show |
TMC1 | ENSG00000165091.18 | transcript | ENST00000297784.10 | protein_coding | 4079 | chr9 | TogoVar |