view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCN3B_chr11_123624188_123659624 | 123644800 | AATATATA others(11): Show |
A | intron_variant | MODIFIER | HG02258.hp1 HG02486.hp1 NA20129.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0033 | a0001c0001t0001g0211 a0001c0001t0033g0033 |
3 | 249 | 0.0120 | -18 | c.219 others(33): Show |
SCN3B | ENSG00000166257.10 | transcript | ENST00000299333.8 | protein_coding | 3/6 | chr11 | TogoVar | |||||||
SCN4A_chr17_63933554_63977918 | 63942258 | GGTGTGTG others(11): Show |
G | intron_variant | MODIFIER | HG02083.hp2 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0240 | 1 | 124 | 0.0081 | -18 | c.428 others(35): Show |
SCN4A | ENSG00000007314.12 | transcript | ENST00000435607.3 | protein_coding | 23/23 | chr17 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38555057 | TTATATAT others(11): Show |
T | intron_variant | MODIFIER | HG03130.hp1 HG06807.hp1 |
a0001a0002 | a0001c0019a0002c0016 | a0001c0019t0002a0002c0016t0002 | a0001c0019t0002g0043 a0002c0016t0002g0120 |
2 | 262 | 0.0076 | -18 | c.454 others(35): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 26/27 | chr3 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38555091 | ATATATAT others(11): Show |
A | intron_variant | MODIFIER | NA19043.hp2 | a0002 | a0002c0059 | a0002c0059t0002 | a0002c0059t0002g0034 | 1 | 335 | 0.0030 | -18 | c.454 others(35): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 26/27 | chr3 | TogoVar | |||||||
SCN7A_chr2_166398573_166499249 | 166414275 | TATATATA others(11): Show |
T | intron_variant | MODIFIER | HG02129.hp2 NA18612.hp1 NA18747.hp1 others(3): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0017others(1): Show | a0001c0001t0001g0218 a0001c0001t0002g0013 a0001c0001t0002g0222 others(2): Show |
6 | 392 | 0.0153 | -18 | c.341 others(37): Show |
SCN7A | ENSG00000136546.17 | transcript | ENST00000643258.1 | protein_coding | 21/25 | chr2 | TogoVar | |||||||
SCN8A_chr12_51586233_51817864 | 51639879 | CTTTTTTT others(11): Show |
C | intron_variant | MODIFIER | HG02922.hp1 HG03017.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0002t0001 | a0001c0001t0005g0086 a0001c0002t0001g0194 |
2 | 19 | 0.1053 | -18 | c.-54 others(37): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN9A_chr2_166190185_166380944 | 166222930 | CAAAAAAA others(11): Show |
C | intron_variant | MODIFIER | NA18959.hp2 | a0001 | a0001c0003 | a0001c0003t0015 | a0001c0003t0015g0063 | 1 | 270 | 0.0037 | -18 | c.439 others(37): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 24/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166311329 | CCTATATA others(11): Show |
C | intron_variant | MODIFIER | HG01358.hp1 HG02074.hp2 HG02258.hp1 others(9): Show |
a0001a0004a0007others(2): Show | a0001c0002a0001c0003a0001c0007others(6): Show | a0001c0002t0006a0001c0003t0001a0001c0003t0002others(8): Show | a0001c0002t0006g0269 a0001c0003t0001g0208 a0001c0003t0001g0219 others(9): Show |
12 | 167 | 0.0719 | -18 | c.258 others(33): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 2/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166311330 | CTATATAT others(11): Show |
C | intron_variant | MODIFIER | HG01123.hp2 HG01168.hp2 HG01169.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0004a0001c0022others(1): Show | a0001c0001t0002a0001c0004t0001a0001c0022t0008others(1): Show | a0001c0001t0002g0149 a0001c0001t0002g0155 a0001c0004t0001g0167 others(3): Show |
6 | 86 | 0.0698 | -18 | c.258 others(33): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 2/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166370192 | AAATAATA others(11): Show |
A | intron_variant | MODIFIER | HG00642.hp2 HG01081.hp2 HG01168.hp1 others(14): Show |
a0001a0003a0005others(2): Show | a0001c0003a0001c0005a0003c0013others(5): Show | a0001c0003t0001a0001c0003t0002a0001c0003t0027others(7): Show | a0001c0003t0001g0208 a0001c0003t0001g0213 a0001c0003t0001g0217 others(13): Show |
17 | 265 | 0.0642 | -18 | c.-51 others(35): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCNN1B_chr16_23297302_23386294 | 23316571 | ATCACCAC others(11): Show |
A | intron_variant | MODIFIER | HG01167.hp2 HG01243.hp2 HG01884.hp2 others(22): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0008others(1): Show | a0001c0001t0001a0001c0001t0007a0001c0003t0001others(3): Show | a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 others(22): Show |
25 | 304 | 0.0822 | -18 | c.-9+ others(35): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SCNN1B_chr16_23297302_23386294 | 23343491 | GAAGGAAG others(11): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(30): Show |
a0001 | a0001c0001a0001c0002a0001c0009others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0009t0001others(1): Show | a0001c0001t0001g0007 a0001c0001t0001g0014 a0001c0001t0001g0015 others(30): Show |
33 | 303 | 0.1089 | -18 | c.-8- others(33): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SCNN1B_chr16_23297302_23386294 | 23365543 | GAGAAAGA others(11): Show |
G | intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0131 | 1 | 304 | 0.0033 | -18 | c.777 others(35): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1286119 | CCTGGGGG others(11): Show |
C | disruptive_inframe_deletion | MODERATE | HG04184.hp1 | a0024 | a0024c0037 | a0024c0037t0001 | a0024c0037t0001g0094 | 1 | 288 | 0.0035 | -18 | c.753 others(25): Show |
p.Trp others(13): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 7/18 | 979/3050 | 753/2409 | 251/802 | chr1 | TogoVar | |||
SCNN1D_chr1_1275436_1297025 | 1288204 | TGTGTCTC others(11): Show |
T | intron_variant | MODIFIER | HG00280.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0234 | 1 | 265 | 0.0038 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1288275 | CCCCGAGT others(11): Show |
C | intron_variant | MODIFIER | HG02717.hp1 HG02818.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0222 a0001c0001t0001g0230 |
2 | 248 | 0.0081 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1288356 | TCTGCTCC others(11): Show |
T | intron_variant | MODIFIER | HG01106.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0167 | 1 | 270 | 0.0037 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1288641 | CCCGTCCC others(11): Show |
C | intron_variant | MODIFIER | HG01346.hp1 | a0003 | a0003c0004 | a0003c0004t0003 | a0003c0004t0003g0007 | 1 | 173 | 0.0058 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1288706 | AGTCTCTG others(11): Show |
A | intron_variant | MODIFIER | HG01261.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0194 | 1 | 78 | 0.0128 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1288813 | CCCCGAGT others(11): Show |
C | intron_variant | MODIFIER | HG03688.hp1 NA18967.hp1 |
a0001a0009 | a0001c0001a0009c0014 | a0001c0001t0001a0009c0014t0001 | a0001c0001t0001g0159 a0009c0014t0001g0052 |
2 | 259 | 0.0077 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1288876 | TCTGCTCC others(11): Show |
T | intron_variant | MODIFIER | NA18980.hp2 | a0027 | a0027c0027 | a0027c0027t0001 | a0027c0027t0001g0022 | 1 | 268 | 0.0037 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289035 | CCCCGAGT others(11): Show |
C | intron_variant | MODIFIER | HG02015.hp2 NA19009.hp2 |
a0003a0010 | a0003c0004a0010c0019 | a0003c0004t0003a0010c0019t0003 | a0003c0004t0003g0134 a0010c0019t0003g0097 |
2 | 255 | 0.0078 | -18 | c.166 others(37): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289093 | CCCCGTGT others(11): Show |
C | intron_variant | MODIFIER | NA19005.hp1 | a0003 | a0003c0004 | a0003c0004t0003 | a0003c0004t0003g0136 | 1 | 265 | 0.0038 | -18 | c.166 others(37): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289138 | TCTGCCCC others(11): Show |
T | intron_variant | MODIFIER | HG01346.hp1 HG02738.hp1 NA18961.hp1 others(1): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0003c0004t0003 | a0001c0001t0001g0185 a0003c0004t0003g0005 a0003c0004t0003g0007 others(1): Show |
4 | 267 | 0.0150 | -18 | c.166 others(37): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289143 | CCCGTCCC others(11): Show |
C | intron_variant | MODIFIER | HG00408.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0084 | 1 | 152 | 0.0066 | -18 | c.166 others(37): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289263 | CCCCGTGT others(11): Show |
C | intron_variant | MODIFIER | HG02074.hp1 | a0003 | a0003c0004 | a0003c0004t0003 | a0003c0004t0003g0147 | 1 | 257 | 0.0039 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289277 | TCCGTCCC others(11): Show |
T | intron_variant | MODIFIER | NA18964.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0034 | 1 | 237 | 0.0042 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289313 | CCCGTCCC others(11): Show |
C | intron_variant | MODIFIER | HG01943.hp1 NA18960.hp2 NA18998.hp1 others(2): Show |
a0002a0003 | a0002c0002a0003c0004 | a0002c0002t0001a0003c0004t0003 | a0002c0002t0001g0014 a0002c0002t0001g0017 a0002c0002t0001g0027 others(2): Show |
5 | 155 | 0.0323 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289642 | TCTGCTCC others(11): Show |
T | intron_variant | MODIFIER | HG01192.hp1 HG01975.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0237 a0001c0001t0002g0236 |
2 | 270 | 0.0074 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289671 | CCCCGAGT others(11): Show |
C | intron_variant | MODIFIER | HG01361.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0175 | 1 | 267 | 0.0037 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289954 | CTCTGCTC others(11): Show |
C | intron_variant | MODIFIER | HG02922.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0226 | 1 | 286 | 0.0035 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1290009 | CCTGCTCC others(11): Show |
C | intron_variant | MODIFIER | HG00735.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0204 | 1 | 140 | 0.0071 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1290027 | TCTGCTCC others(11): Show |
T | intron_variant | MODIFIER | HG01169.hp2 | a0001 | a0001c0020 | a0001c0020t0001 | a0001c0020t0001g0176 | 1 | 265 | 0.0038 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1290045 | CCTGCTCC others(11): Show |
C | intron_variant | MODIFIER | HG00642.hp2 HG01517.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0242 a0001c0001t0001g0245 |
2 | 115 | 0.0174 | -18 | c.166 others(35): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1290128 | CCCCGTGT others(11): Show |
C | intron_variant | MODIFIER | HG02922.hp2 HG03139.hp1 |
a0001a0004 | a0001c0001a0004c0008 | a0001c0001t0001a0004c0008t0001 | a0001c0001t0001g0226 a0004c0008t0001g0231 |
2 | 227 | 0.0088 | -18 | c.166 others(34): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1290155 | TCTGCTCC others(11): Show |
T | intron_variant | MODIFIER | HG02622.hp1 HG02723.hp1 HG02886.hp1 others(1): Show |
a0002a0014a0022 | a0002c0003a0014c0021a0022c0045 | a0002c0003t0004a0014c0021t0008a0022c0045t0001 | a0002c0003t0004g0113 a0002c0003t0004g0116 a0014c0021t0008g0270 others(1): Show |
4 | 276 | 0.0145 | -18 | c.166 others(33): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1G_chr16_23177745_23221883 | 23204288 | CATATATA others(11): Show |
C | intron_variant | MODIFIER | HG02056.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0297 | 1 | 151 | 0.0066 | -18 | c.107 others(37): Show |
SCNN1G | ENSG00000166828.3 | transcript | ENST00000300061.3 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SCNN1G_chr16_23177745_23221883 | 23204318 | TATATATA others(11): Show |
T | intron_variant | MODIFIER | HG01123.hp1 | a0001 | a0001c0008 | a0001c0008t0001 | a0001c0008t0001g0018 | 1 | 316 | 0.0032 | -18 | c.107 others(37): Show |
SCNN1G | ENSG00000166828.3 | transcript | ENST00000300061.3 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SCOC_chr4_140368646_140390728 | 140369857 | ATTTTTTT others(11): Show |
A | upstream_gene_variant | MODIFIER | HG02258.hp2 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0032 | 2 | 145 | 0.0138 | -18 | c.-39 others(29): Show |
SCOC | ENSG00000153130.18 | transcript | ENST00000608372.6 | protein_coding | 3788 | chr4 | TogoVar | |||||||
SCP2_chr1_52922276_53056698 | 52934592 | CTTTTTTT others(11): Show |
C | intron_variant | MODIFIER | HG02897.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0031 | 1 | 15 | 0.0667 | -18 | c.69+ others(33): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 52960478 | ATATGTGT others(11): Show |
A | intron_variant | MODIFIER | HG01884.hp2 HG02257.hp2 HG02486.hp2 others(15): Show |
a0001 | a0001c0002a0001c0004 | a0001c0002t0002a0001c0002t0003a0001c0002t0006others(4): Show | a0001c0002t0002g0138 a0001c0002t0002g0266 a0001c0002t0002g0267 others(15): Show |
18 | 271 | 0.0664 | -18 | c.397 others(35): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 5/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 53037950 | TACACACA others(11): Show |
T | intron_variant | MODIFIER | HG00642.hp2 HG00735.hp2 HG01192.hp2 others(20): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0001a0001c0003t0001a0001c0004t0013others(1): Show | a0001c0001t0001g0057 a0001c0003t0001g0001 a0001c0003t0001g0002 others(20): Show |
23 | 99 | 0.2323 | -18 | c.133 others(35): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 13/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCRN1_chr7_29915109_29994801 | 29966159 | CAGAGAGA others(11): Show |
C | intron_variant | MODIFIER | NA19070.hp1 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0240 | 1 | 32 | 0.0313 | -18 | c.159 others(35): Show |
SCRN1 | ENSG00000136193.17 | transcript | ENST00000242059.10 | protein_coding | 2/7 | chr7 | TogoVar | |||||||
SCRT2_chr20_656596_680802 | 672388 | CGTGTGTG others(11): Show |
C | intron_variant | MODIFIER | HG00642.hp1 HG02109.hp1 HG02145.hp1 others(18): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(2): Show | a0001c0001t0001g0020 a0001c0001t0001g0122 a0001c0001t0001g0154 others(7): Show |
21 | 110 | 0.1909 | -18 | c.133 others(35): Show |
SCRT2 | ENSG00000215397.4 | transcript | ENST00000246104.7 | protein_coding | 1/1 | chr20 | TogoVar | |||||||
SCRT2_chr20_656596_680802 | 674715 | GTGTGTGT others(11): Show |
G | intron_variant | MODIFIER | HG00323.hp1 HG01243.hp2 HG01261.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0011others(1): Show | a0001c0001t0001g0162 a0001c0001t0001g0169 a0001c0001t0003g0061 others(2): Show |
7 | 456 | 0.0154 | -18 | c.133 others(33): Show |
SCRT2 | ENSG00000215397.4 | transcript | ENST00000246104.7 | protein_coding | 1/1 | chr20 | TogoVar | |||||||
SCTR_chr2_119434843_119529483 | 119512328 | CCCTTCCC others(11): Show |
C | intron_variant | MODIFIER | HG04228.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0213 | 1 | 288 | 0.0035 | -18 | c.72+ others(35): Show |
SCTR | ENSG00000080293.10 | transcript | ENST00000019103.8 | protein_coding | 1/12 | chr2 | TogoVar | |||||||
SCTR_chr2_119434843_119529483 | 119512334 | CCCTTCCC others(11): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00408.hp2 others(46): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0135 a0001c0001t0001g0224 a0001c0001t0001g0236 others(46): Show |
49 | 216 | 0.2269 | -18 | c.72+ others(35): Show |
SCTR | ENSG00000080293.10 | transcript | ENST00000019103.8 | protein_coding | 1/12 | chr2 | TogoVar | |||||||
SCT_chr11_621309_632181 | 628937 | CTTTCTTT others(11): Show |
C | upstream_gene_variant | MODIFIER | HG00323.hp2 HG00544.hp2 HG00735.hp2 others(25): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 |
28 | 407 | 0.0688 | -18 | c.-18 others(29): Show |
SCT | ENSG00000070031.4 | transcript | ENST00000176195.4 | protein_coding | 1757 | chr11 | TogoVar | |||||||
SCUBE2_chr11_9014476_9096599 | 9045602 | GACAGACA others(11): Show |
G | intron_variant | MODIFIER | NA18944.hp1 | a0003 | a0003c0008 | a0003c0008t0011 | a0003c0008t0011g0194 | 1 | 350 | 0.0029 | -18 | c.200 others(37): Show |
SCUBE2 | ENSG00000175356.14 | transcript | ENST00000649792.2 | protein_coding | 16/22 | chr11 | TogoVar | |||||||
SCYGR1_chr2_227382683_227392949 | 227387217 | CTCTCTCT others(11): Show |
C | downstream_gene_variant | MODIFIER | NA18995.hp2 NA19064.hp1 NA19079.hp2 |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0000 | 3 | 359 | 0.0084 | -18 | c.*44 others(27): Show |
SCYGR1 | ENSG00000284629.1 | transcript | ENST00000641359.1 | protein_coding | 465 | chr2 | TogoVar |