view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SHQ1_chr3_72744277_72853445 | 72852094 | CTCTCTCT others(11): Show |
C | upstream_gene_variant | MODIFIER | HG02717.hp1 | a0007 | a0007c0007 | a0007c0007t0001 | a0007c0007t0001g0207 | 1 | 215 | 0.0047 | -18 | c.-37 others(29): Show |
SHQ1 | ENSG00000144736.14 | transcript | ENST00000325599.13 | protein_coding | 3650 | chr3 | TogoVar | |||||||
SHQ1_chr3_72744277_72853445 | 72852098 | CTCTCTCT others(11): Show |
C | upstream_gene_variant | MODIFIER | HG02615.hp1 HG02809.hp2 |
a0002a0007 | a0002c0002a0007c0007 | a0002c0002t0004a0007c0007t0001 | a0002c0002t0004g0006 a0007c0007t0001g0208 |
2 | 217 | 0.0092 | -18 | c.-37 others(29): Show |
SHQ1 | ENSG00000144736.14 | transcript | ENST00000325599.13 | protein_coding | 3654 | chr3 | TogoVar | |||||||
SHQ1_chr3_72744277_72853445 | 72852100 | CTCTCTCT others(11): Show |
C | upstream_gene_variant | MODIFIER | HG02055.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0203 | 1 | 215 | 0.0047 | -18 | c.-37 others(29): Show |
SHQ1 | ENSG00000144736.14 | transcript | ENST00000325599.13 | protein_coding | 3656 | chr3 | TogoVar | |||||||
SHQ1_chr3_72744277_72853445 | 72852102 | CTCTCTAT others(11): Show |
C | upstream_gene_variant | MODIFIER | HG01243.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0018 | 1 | 211 | 0.0047 | -18 | c.-37 others(29): Show |
SHQ1 | ENSG00000144736.14 | transcript | ENST00000325599.13 | protein_coding | 3658 | chr3 | TogoVar | |||||||
SHQ1_chr3_72744277_72853445 | 72852106 | CTATATAT others(11): Show |
C | upstream_gene_variant | MODIFIER | HG03516.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0024 | 1 | 136 | 0.0074 | -18 | c.-37 others(29): Show |
SHQ1 | ENSG00000144736.14 | transcript | ENST00000325599.13 | protein_coding | 3662 | chr3 | TogoVar | |||||||
SHROOM2_chrX_9781429_9954443 | 9815434 | ATGTGTGT others(11): Show |
A | intron_variant | MODIFIER | HG02451.hp1 HG03579.hp1 |
a0004a0038 | a0004c0024a0038c0031 | a0004c0024t0007a0038c0031t0001 | a0004c0024t0007g0255 a0038c0031t0001g0007 |
2 | 20 | 0.1000 | -18 | c.165 others(37): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9823026 | TCTCCTCC others(11): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00408.hp2 others(56): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0003a0001c0007others(15): Show | a0001c0001t0001a0001c0001t0015a0001c0003t0001others(18): Show | a0001c0001t0001g0023 a0001c0001t0001g0035 a0001c0001t0001g0036 others(56): Show |
59 | 135 | 0.4370 | -18 | c.165 others(37): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9868206 | ATTTATTT others(11): Show |
A | intron_variant | MODIFIER | HG02723.hp2 HG02922.hp2 HG06807.hp2 |
a0006a0031a0040 | a0006c0039a0031c0041a0040c0042 | a0006c0039t0002a0031c0041t0001a0040c0042t0003 | a0006c0039t0002g0032 a0031c0041t0001g0019 a0040c0042t0003g0137 |
3 | 46 | 0.0652 | -18 | c.166 others(35): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9912198 | GACACACA others(11): Show |
G | intron_variant | MODIFIER | HG03041.hp1 | a0002 | a0002c0019 | a0002c0019t0006 | a0002c0019t0006g0227 | 1 | 139 | 0.0072 | -18 | c.289 others(39): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM2_chrX_9781429_9954443 | 9927356 | CAAAAAAA others(11): Show |
C | intron_variant | MODIFIER | HG02280.hp2 | a0025 | a0025c0072 | a0025c0072t0002 | a0025c0072t0002g0236 | 1 | 22 | 0.0455 | -18 | c.289 others(37): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76651401 | AATATATA others(11): Show |
A | intron_variant | MODIFIER | NA18964.hp2 NA18974.hp1 NA19009.hp2 |
a0002a0003a0028 | a0002c0003a0003c0028a0028c0030 | a0002c0003t0001a0003c0028t0003a0028c0030t0001 | a0002c0003t0001g0013 a0003c0028t0003g0202 a0028c0030t0001g0040 |
3 | 6 | 0.5000 | -18 | c.324 others(37): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76735854 | AAAAAAAA others(11): Show |
A | intron_variant | MODIFIER | HG02258.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0055 | 1 | 211 | 0.0047 | -18 | c.588 others(35): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76735868 | AATATATA others(11): Show |
A | intron_variant | MODIFIER | NA18522.hp2 | a0003 | a0003c0002 | a0003c0002t0001 | a0003c0002t0001g0071 | 1 | 150 | 0.0067 | -18 | c.588 others(35): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM3_chr4_76430229_76788253 | 76746781 | CATTATTA others(11): Show |
C | intron_variant | MODIFIER | HG02451.hp1 HG02559.hp1 HG02647.hp2 others(7): Show |
a0003a0011 | a0003c0002a0003c0020a0011c0018 | a0003c0002t0001a0003c0020t0001a0011c0018t0001 | a0003c0002t0001g0036 a0003c0002t0001g0037 a0003c0002t0001g0041 others(7): Show |
10 | 43 | 0.2326 | -18 | c.375 others(37): Show |
SHROOM3 | ENSG00000138771.16 | transcript | ENST00000296043.7 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SHROOM4_chrX_50581796_50819194 | 50705989 | TACACACA others(11): Show |
T | intron_variant | MODIFIER | HG02922.hp2 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0083 | 1 | 46 | 0.0217 | -18 | c.118 others(37): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 1/8 | chrX | TogoVar | |||||||
SHROOM4_chrX_50581796_50819194 | 50764394 | GCGAGTGG others(11): Show |
G | intron_variant | MODIFIER | HG01243.hp1 HG01361.hp1 HG01884.hp1 others(23): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0003c0004others(7): Show | a0001c0001t0002a0001c0001t0007a0001c0001t0012others(11): Show | a0001c0001t0002g0016 a0001c0001t0002g0057 a0001c0001t0002g0058 others(23): Show |
26 | 173 | 0.1503 | -18 | c.117 others(37): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 1/8 | chrX | TogoVar | |||||||
SHTN1_chr10_116876477_117010187 | 116963035 | GTTTTTTT others(11): Show |
G | intron_variant | MODIFIER | HG00597.hp1 HG00639.hp1 HG00639.hp2 others(43): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(12): Show | a0001c0001t0001g0003 a0001c0001t0001g0039 a0001c0001t0001g0056 others(43): Show |
46 | 49 | 0.9388 | -18 | c.173 others(35): Show |
SHTN1 | ENSG00000187164.20 | transcript | ENST00000355371.9 | protein_coding | 3/16 | chr10 | TogoVar | |||||||
SIGIRR_chr11_400716_419999 | 409756 | TGTGGCCA others(11): Show |
T | intron_variant | MODIFIER | NA18978.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0052 | 1 | 240 | 0.0042 | -18 | c.7+9 others(28): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 2/9 | chr11 | TogoVar | |||||||
SIGIRR_chr11_400716_419999 | 415207 | CGTGTGTG others(11): Show |
C | upstream_gene_variant | MODIFIER | HG02109.hp1 HG02145.hp2 HG02451.hp2 others(11): Show |
a0001a0004 | a0001c0001a0001c0006a0004c0007 | a0001c0001t0001a0001c0006t0001a0004c0007t0001 | a0001c0001t0001g0022 a0001c0001t0001g0075 a0001c0001t0001g0116 others(11): Show |
14 | 23 | 0.6087 | -18 | c.-55 others(27): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 209 | chr11 | TogoVar | |||||||
SIGLEC8_chr19_51445997_51463454 | 51459532 | GATGATTA others(11): Show |
G | upstream_gene_variant | MODIFIER | HG02258.hp1 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0046 | 1 | 349 | 0.0029 | -18 | c.-11 others(29): Show |
SIGLEC8 | ENSG00000105366.15 | transcript | ENST00000321424.7 | protein_coding | 1079 | chr19 | TogoVar | |||||||
SIK3_chr11_116838402_117103428 | 116965734 | AATATATA others(11): Show |
A | intron_variant | MODIFIER | HG01261.hp2 HG02040.hp2 HG02129.hp1 others(9): Show |
a0001a0011 | a0001c0001a0011c0015 | a0001c0001t0001a0001c0001t0003a0011c0015t0001 | a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0157 others(9): Show |
12 | 77 | 0.1558 | -18 | c.274 others(35): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | |||||||
SIK3_chr11_116838402_117103428 | 117013901 | GGGGGGGG others(11): Show |
G | intron_variant | MODIFIER | HG03669.hp2 | a0002 | a0002c0003 | a0002c0003t0006 | a0002c0003t0006g0319 | 1 | 320 | 0.0031 | -18 | c.274 others(37): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | |||||||
SIK3_chr11_116838402_117103428 | 117023593 | CAAACAAA others(11): Show |
C | intron_variant | MODIFIER | HG02523.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0140 | 1 | 329 | 0.0030 | -18 | c.274 others(37): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | |||||||
SIK3_chr11_116838402_117103428 | 117056536 | GATAGATA others(11): Show |
G | intron_variant | MODIFIER | HG01074.hp1 HG02615.hp1 HG02922.hp1 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0004a0001c0002t0011 | a0001c0001t0001g0098 a0001c0001t0001g0261 a0001c0001t0001g0296 others(6): Show |
9 | 70 | 0.1286 | -18 | c.273 others(37): Show |
SIK3 | ENSG00000160584.17 | transcript | ENST00000445177.6 | protein_coding | 1/24 | chr11 | TogoVar | |||||||
SIKE1_chr1_114764479_114785685 | 114765216 | GTTTTTTT others(11): Show |
G | downstream_gene_variant | MODIFIER | HG02280.hp1 HG02615.hp1 HG03139.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0013 | a0001c0001t0003g0005 a0001c0001t0013g0032 |
3 | 44 | 0.0682 | -18 | c.*90 others(29): Show |
SIKE1 | ENSG00000052723.12 | transcript | ENST00000060969.6 | protein_coding | 4262 | chr1 | TogoVar | |||||||
SIL1_chr5_138941724_139203368 | 139145629 | CGTGTGTG others(11): Show |
C | intron_variant | MODIFIER | NA18981.hp2 NA18986.hp1 NA19057.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 others(1): Show |
4 | 8 | 0.5000 | -18 | c.-10 others(37): Show |
SIL1 | ENSG00000120725.13 | transcript | ENST00000394817.7 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
SIM1_chr6_100380009_100469921 | 100458006 | TTCTCTCT others(11): Show |
T | intron_variant | MODIFIER | HG00733.hp1 HG00735.hp1 HG00741.hp1 others(17): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(8): Show | a0001c0001t0002g0134 a0001c0001t0002g0152 a0001c0001t0002g0158 others(17): Show |
20 | 59 | 0.3390 | -18 | c.176 others(35): Show |
SIM1 | ENSG00000112246.10 | transcript | ENST00000369208.8 | protein_coding | 2/11 | chr6 | TogoVar | |||||||
SIM2_chr21_36694115_36754917 | 36736846 | TTTTCTTT others(11): Show |
T | intron_variant | MODIFIER | HG01981.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0194 | 1 | 407 | 0.0025 | -18 | c.851 others(35): Show |
SIM2 | ENSG00000159263.16 | transcript | ENST00000290399.11 | protein_coding | 7/10 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
SIN3A_chr15_75364379_75456690 | 75440192 | ATCGTTAT others(11): Show |
A | intron_variant | MODIFIER | NA18992.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0113 | 1 | 322 | 0.0031 | -18 | c.-33 others(35): Show |
SIN3A | ENSG00000169375.17 | transcript | ENST00000394947.8 | protein_coding | 1/20 | chr15 | TogoVar | |||||||
SIPA1L1_chr14_71315476_71746209 | 71590034 | AAAAAAAA others(11): Show |
A | intron_variant | MODIFIER | HG01993.hp1 HG03704.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0060 a0001c0001t0002g0034 |
2 | 167 | 0.0120 | -18 | c.149 others(35): Show |
SIPA1L1 | ENSG00000197555.10 | transcript | ENST00000381232.8 | protein_coding | 5/23 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SIPA1L1_chr14_71315476_71746209 | 71627131 | CTTTTTTT others(11): Show |
C | intron_variant | MODIFIER | HG01261.hp1 HG01496.hp1 HG03486.hp2 others(2): Show |
a0001a0009 | a0001c0001a0009c0015 | a0001c0001t0001a0009c0015t0002 | a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0031 others(2): Show |
5 | 17 | 0.2941 | -18 | c.181 others(37): Show |
SIPA1L1 | ENSG00000197555.10 | transcript | ENST00000381232.8 | protein_coding | 7/23 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SIPA1L2_chr1_232392965_232635133 | 232564149 | CGTGTGTG others(11): Show |
C | intron_variant | MODIFIER | HG00544.hp2 HG02040.hp2 HG02486.hp2 others(7): Show |
a0001a0002a0007 | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0002a0001c0001t0003a0001c0002t0001others(6): Show | a0001c0001t0002g0022 a0001c0001t0003g0239 a0001c0002t0001g0173 others(7): Show |
10 | 162 | 0.0617 | -18 | c.-27 others(39): Show |
SIPA1L2 | ENSG00000116991.12 | transcript | ENST00000674635.1 | protein_coding | 2/22 | chr1 | TogoVar | |||||||
SIPA1L2_chr1_232392965_232635133 | 232564235 | CGTGTGTG others(11): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00544.hp1 others(51): Show |
a0001a0002a0003others(12): Show | a0001c0001a0001c0002a0001c0003others(28): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(35): Show | a0001c0001t0001g0163 a0001c0001t0001g0211 a0001c0001t0003g0254 others(51): Show |
54 | 149 | 0.3624 | -18 | c.-27 others(37): Show |
SIPA1L2 | ENSG00000116991.12 | transcript | ENST00000674635.1 | protein_coding | 2/22 | chr1 | TogoVar | |||||||
SIPA1L2_chr1_232392965_232635133 | 232572734 | CATACATA others(11): Show |
C | intron_variant | MODIFIER | HG01109.hp2 HG02630.hp1 HG02647.hp2 others(1): Show |
a0001a0002a0008 | a0001c0003a0002c0060a0008c0014 | a0001c0003t0001a0001c0003t0003a0002c0060t0003others(1): Show | a0001c0003t0001g0137 a0001c0003t0003g0263 a0002c0060t0003g0275 others(1): Show |
4 | 164 | 0.0244 | -18 | c.-27 others(37): Show |
SIPA1L2 | ENSG00000116991.12 | transcript | ENST00000674635.1 | protein_coding | 2/22 | chr1 | TogoVar | |||||||
SIPA1L3_chr19_37902208_38213369 | 38111977 | ATGCACAC others(11): Show |
A | intron_variant | MODIFIER | HG03453.hp1 | a0003 | a0003c0005 | a0003c0005t0003 | a0003c0005t0003g0138 | 1 | 162 | 0.0062 | -18 | c.229 others(37): Show |
SIPA1L3 | ENSG00000105738.11 | transcript | ENST00000222345.11 | protein_coding | 8/21 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SIPA1L3_chr19_37902208_38213369 | 38131541 | ATGGGTTT others(11): Show |
A | intron_variant | MODIFIER | HG02922.hp2 | a0003 | a0003c0005 | a0003c0005t0003 | a0003c0005t0003g0109 | 1 | 162 | 0.0062 | -18 | c.314 others(35): Show |
SIPA1L3 | ENSG00000105738.11 | transcript | ENST00000222345.11 | protein_coding | 10/21 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SIPA1L3_chr19_37902208_38213369 | 38178086 | GGTGTGTG others(11): Show |
G | intron_variant | MODIFIER | HG02886.hp2 HG03486.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0054 a0001c0001t0002g0130 |
2 | 15 | 0.1333 | -18 | c.420 others(37): Show |
SIPA1L3 | ENSG00000105738.11 | transcript | ENST00000222345.11 | protein_coding | 15/21 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SIPA1L3_chr19_37902208_38213369 | 38199149 | GGGTTTGC others(11): Show |
G | intron_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0001 | a0001c0001t0025 | a0001c0001t0025g0095 | 1 | 162 | 0.0062 | -18 | c.498 others(35): Show |
SIPA1L3 | ENSG00000105738.11 | transcript | ENST00000222345.11 | protein_coding | 19/21 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SIPA1_chr11_65633101_65655912 | 65638048 | CGGCCCCG others(11): Show |
C | upstream_gene_variant | MODIFIER | HG00280.hp2 HG01261.hp2 HG01433.hp2 others(1): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0003a0001c0004t0002 | a0001c0001t0003g0015 a0001c0004t0002g0008 |
4 | 401 | 0.0100 | -18 | c.-22 others(27): Show |
SIPA1 | ENSG00000213445.10 | transcript | ENST00000534313.6 | protein_coding | 52 | chr11 | TogoVar | |||||||
SIRT4_chr12_120297321_120318249 | 120304827 | ATATATAT others(11): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp2 HG00558.hp2 others(84): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(15): Show |
87 | 318 | 0.2736 | -18 | c.497 others(33): Show |
SIRT4 | ENSG00000089163.4 | transcript | ENST00000202967.4 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SIRT7_chr17_81906939_81923176 | 81909085 | CCTCCAGT others(11): Show |
C | downstream_gene_variant | MODIFIER | HG02615.hp2 HG03471.hp2 HG03540.hp1 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0010 | 3 | 340 | 0.0088 | -18 | c.*33 others(29): Show |
SIRT7 | ENSG00000187531.14 | transcript | ENST00000328666.11 | protein_coding | 2853 | chr17 | TogoVar | |||||||
SIX5_chr19_45759785_45774252 | 45770204 | CCAGCAGC others(11): Show |
C | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00642.hp1 others(15): Show |
a0001a0003a0004 | a0001c0001a0003c0003a0004c0004others(1): Show | a0001c0001t0001a0003c0003t0001a0004c0004t0002others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0007 a0003c0003t0001g0003 others(6): Show |
18 | 23 | 0.7826 | -18 | c.-13 others(29): Show |
SIX5 | ENSG00000177045.11 | transcript | ENST00000317578.7 | protein_coding | 953 | chr19 | TogoVar | |||||||
SI_chr3_164973898_165083496 | 165073170 | TTCTCTCT others(11): Show |
T | intron_variant | MODIFIER | HG01106.hp1 | a0002 | a0002c0006 | a0002c0006t0001 | a0002c0006t0001g0215 | 1 | 15 | 0.0667 | -18 | c.255 others(35): Show |
SI | ENSG00000090402.8 | transcript | ENST00000264382.8 | protein_coding | 3/47 | chr3 | TogoVar | |||||||
SKAP1_chr17_48128442_48435214 | 48204997 | CTTTCTTT others(11): Show |
C | intron_variant | MODIFIER | HG02056.hp1 HG02683.hp2 HG02922.hp1 others(4): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0248 a0002c0002t0001g0253 a0002c0002t0001g0257 others(4): Show |
7 | 290 | 0.0241 | -18 | c.281 others(37): Show |
SKAP1 | ENSG00000141293.16 | transcript | ENST00000336915.11 | protein_coding | 4/12 | chr17 | TogoVar | |||||||
SKAP1_chr17_48128442_48435214 | 48224050 | GAGGAGGA others(11): Show |
G | intron_variant | MODIFIER | HG01358.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0258 | 1 | 273 | 0.0037 | -18 | c.281 others(37): Show |
SKAP1 | ENSG00000141293.16 | transcript | ENST00000336915.11 | protein_coding | 4/12 | chr17 | TogoVar | |||||||
SKAP1_chr17_48128442_48435214 | 48252713 | AGTGTGTG others(11): Show |
A | intron_variant | MODIFIER | NA21309.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0032 | 1 | 77 | 0.0130 | -18 | c.281 others(37): Show |
SKAP1 | ENSG00000141293.16 | transcript | ENST00000336915.11 | protein_coding | 4/12 | chr17 | TogoVar | |||||||
SKAP1_chr17_48128442_48435214 | 48321347 | CATTATTA others(11): Show |
C | intron_variant | MODIFIER | HG02622.hp1 NA21309.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0235 a0002c0002t0001g0053 |
2 | 96 | 0.0208 | -18 | c.280 others(37): Show |
SKAP1 | ENSG00000141293.16 | transcript | ENST00000336915.11 | protein_coding | 4/12 | chr17 | TogoVar | |||||||
SKAP2_chr7_26662068_26869590 | 26717509 | CAAAAAAA others(11): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG01255.hp1 HG01361.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0008a0001c0001t0010others(1): Show | a0001c0001t0006g0223 a0001c0001t0006g0225 a0001c0001t0006g0226 others(10): Show |
13 | 37 | 0.3514 | -18 | c.796 others(35): Show |
SKAP2 | ENSG00000005020.13 | transcript | ENST00000345317.7 | protein_coding | 9/12 | chr7 | TogoVar | |||||||
SKAP2_chr7_26662068_26869590 | 26720051 | AACACACA others(11): Show |
A | intron_variant | MODIFIER | NA18992.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0268 | 1 | 96 | 0.0104 | -18 | c.796 others(35): Show |
SKAP2 | ENSG00000005020.13 | transcript | ENST00000345317.7 | protein_coding | 9/12 | chr7 | TogoVar | |||||||
SKI_chr1_2223319_2315213 | 2304394 | CCTGATGC others(11): Show |
C | disruptive_inframe_deletion | MODERATE | HG03654.hp2 | a0003 | a0003c0013 | a0003c0013t0031 | a0003c0013t0031g0177 | 1 | 328 | 0.0030 | -18 | c.157 others(27): Show |
p.Asp others(13): Show |
SKI | ENSG00000157933.11 | transcript | ENST00000378536.5 | protein_coding | 5/7 | 2026/6083 | 1578/2187 | 526/728 | INFO_REALIGN_3_PRIME | chr1 | TogoVar |