Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLCO1C1_chr12_20690332_20758386	20709887	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02630.hp1 HG02976.hp2 others(5): Show HG02559.hp1 HG02630.hp1 HG02976.hp2 HG03209.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0005 a0001c0003t0005 a0001c0001t0001 a0001c0001t0005 a0001c0003t0005	a0001c0001t0001g0068 a0001c0001t0001g0104 a0001c0001t0001g0105 others(4): Show a0001c0001t0001g0068 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0005g0027 a0001c0003t0005g0002 a0001c0003t0005g0026 a0001c0003t0005g0028	8	226	0.0354	-18	c.405 others(35): Show c.405-1478_405-1461delAAAAAAAAAAAAAAAAAA	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1C1_chr12_20690332_20758386	20717648	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG04228.hp2 NA18522.hp1 HG04228.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0242 a0001c0001t0001g0189 a0001c0001t0001g0242	2	64	0.0313	-18	c.775 others(33): Show c.775+445_775+462delTTTTTTTTTTTTTTTTTT	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	7/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1C1_chr12_20690332_20758386	20724407	GTGTGTAT others(11): Show GTGTGTATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02683.hp2 HG03041.hp2 others(2): Show HG00099.hp2 HG02683.hp2 HG03041.hp2 HG03540.hp1 HG03688.hp1	a0001 a0005 a0001 a0005	a0001c0003 a0001c0005 a0005c0019 a0001c0003 a0001c0005 a0005c0019	a0001c0003t0001 a0001c0005t0002 a0005c0019t0002 a0001c0003t0001 a0001c0005t0002 a0005c0019t0002	a0001c0003t0001g0034 a0001c0003t0001g0284 a0001c0005t0002g0044 others(2): Show a0001c0003t0001g0034 a0001c0003t0001g0284 a0001c0005t0002g0044 a0001c0005t0002g0184 a0005c0019t0002g0074	5	264	0.0189	-18	c.118 others(37): Show c.1186+1155_1186+1172delGTGTATATATATATATAT	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1C1_chr12_20690332_20758386	20724409	GTGTATAT others(11): Show GTGTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01891.hp1 HG02922.hp1 others(7): Show HG01515.hp1 HG01891.hp1 HG02922.hp1 HG02970.hp1 HG03139.hp1 HG03195.hp2 HG03486.hp1 NA18522.hp2 NA19043.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008	a0001c0001t0001 a0001c0002t0002 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0002t0002 a0001c0003t0001 a0001c0003t0003 a0001c0008t0002	a0001c0001t0001g0011 a0001c0001t0001g0060 a0001c0001t0001g0061 others(7): Show a0001c0001t0001g0011 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0002t0002g0196 a0001c0003t0001g0287 a0001c0003t0003g0056 a0001c0008t0002g0223	10	135	0.0741	-18	c.118 others(37): Show c.1186+1157_1186+1174delGTATATATATATATATAT	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1C1_chr12_20690332_20758386	20724435	ATATATAT others(11): Show ATATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01169.hp1 HG02109.hp1 HG01168.hp2 HG01169.hp1 HG02109.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0007 a0001c0003t0003 a0001c0003t0007	a0001c0003t0003g0197 a0001c0003t0003g0198 a0001c0003t0007g0019 a0001c0003t0003g0197 a0001c0003t0003g0198 a0001c0003t0007g0019	3	294	0.0102	-18	c.118 others(37): Show c.1186+1183_1186+1200delATATATATATATATATGT	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	9/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1C1_chr12_20690332_20758386	20757331	TAAAAAAA others(11): Show TAAAAAAAAAAAAAAAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0078	1	21	0.0476	-18	c.48 others(29): Show c.4804_*4821delAAAAAAAAAAAAAAAAAA	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding		3946		chr12	TogoVar
SLCO2A1_chr3_133927701_134034925	133992912	ATGTCATG others(11): Show ATGTCATGAGTGTGGGTGC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02615.hp1 HG03453.hp1 HG02109.hp2 HG02615.hp1 HG03453.hp1	a0002 a0002	a0002c0004 a0002c0005 a0002c0004 a0002c0005	a0002c0004t0002 a0002c0005t0011 a0002c0004t0002 a0002c0005t0011	a0002c0004t0002g0100 a0002c0005t0011g0298 a0002c0005t0011g0299 a0002c0004t0002g0100 a0002c0005t0011g0298 a0002c0005t0011g0299	3	340	0.0088	-18	c.97- others(35): Show c.97-13312_97-13295delGCACCCACACTCATGACA	SLCO2A1	ENSG00000174640.15	transcript	ENST00000310926.11	protein_coding	1/13			chr3	TogoVar
SLCO2A1_chr3_133927701_134034925	134004093	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(242): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01069.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp2 HG01258.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01516.hp1 HG01884.hp1 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02523.hp1 HG02523.hp2 HG02602.hp1 HG02622.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG03098.hp1 HG03195.hp2 HG03209.hp2 HG03453.hp1 HG03471.hp1 HG03492.hp1 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19002.hp1 NA19002.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp1 NA19030.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19077.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA21309.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0008	a0001c0001 a0001c0002 a0001c0007 others(13): Show a0001c0001 a0001c0002 a0001c0007 a0001c0008 a0001c0010 a0001c0019 a0002c0003 a0002c0004 a0002c0005 a0002c0006 a0002c0009 a0002c0012 a0002c0016 a0004c0013 a0006c0020 a0008c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(51): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0014 a0001c0001t0018 a0001c0001t0022 a0001c0001t0029 a0001c0001t0031 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0006 a0001c0002t0007 a0001c0002t0008 a0001c0002t0010 a0001c0002t0011 a0001c0002t0017 a0001c0002t0018 a0001c0002t0030 a0001c0007t0012 a0001c0008t0009 a0001c0010t0002 a0001c0019t0001 a0002c0003t0001 a0002c0003t0002 a0002c0003t0003 a0002c0003t0004 a0002c0003t0009 a0002c0003t0014 a0002c0003t0023 a0002c0003t0025 a0002c0003t0027 a0002c0004t0001 a0002c0004t0002 a0002c0004t0003 a0002c0004t0006 a0002c0004t0008 a0002c0004t0015 a0002c0005t0003 a0002c0005t0004 a0002c0005t0011 a0002c0006t0005 a0002c0009t0003 a0002c0012t0003 a0002c0012t0020 a0002c0016t0004 a0004c0013t0001 a0006c0020t0002 a0008c0014t0001	a0001c0001t0001g0014 a0001c0001t0001g0051 a0001c0001t0001g0053 others(237): Show a0001c0001t0001g0014 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0072 a0001c0001t0001g0085 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0125 a0001c0001t0001g0135 a0001c0001t0001g0146 a0001c0001t0001g0164 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0203 a0001c0001t0001g0222 a0001c0001t0001g0239 a0001c0001t0001g0265 a0001c0001t0002g0003 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0066 a0001c0001t0002g0080 a0001c0001t0002g0093 a0001c0001t0002g0095 a0001c0001t0002g0118 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0137 a0001c0001t0002g0142 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0160 a0001c0001t0002g0193 a0001c0001t0002g0212 a0001c0001t0002g0214 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0228 a0001c0001t0002g0246 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0267 a0001c0001t0002g0279 a0001c0001t0003g0025 a0001c0001t0003g0032 a0001c0001t0003g0034 a0001c0001t0003g0133 a0001c0001t0003g0215 a0001c0001t0004g0058 a0001c0001t0004g0073 a0001c0001t0004g0074 a0001c0001t0004g0119 a0001c0001t0004g0124 a0001c0001t0004g0126 a0001c0001t0004g0127 a0001c0001t0004g0136 a0001c0001t0004g0140 a0001c0001t0004g0144 a0001c0001t0004g0159 a0001c0001t0004g0206 a0001c0001t0004g0260 a0001c0001t0004g0278 a0001c0001t0006g0315 a0001c0001t0006g0316 a0001c0001t0006g0319 a0001c0001t0007g0304 a0001c0001t0007g0327 a0001c0001t0007g0329 a0001c0001t0007g0331 a0001c0001t0008g0301 a0001c0001t0008g0317 a0001c0001t0008g0330 a0001c0001t0008g0332 a0001c0001t0010g0295 a0001c0001t0014g0285 a0001c0001t0014g0289 a0001c0001t0018g0238 a0001c0001t0022g0089 a0001c0001t0029g0322 a0001c0001t0031g0326 a0001c0002t0001g0071 a0001c0002t0001g0078 a0001c0002t0001g0083 a0001c0002t0001g0094 a0001c0002t0001g0107 a0001c0002t0001g0109 a0001c0002t0001g0112 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0134 a0001c0002t0001g0145 a0001c0002t0001g0149 a0001c0002t0001g0151 a0001c0002t0001g0152 a0001c0002t0001g0153 a0001c0002t0001g0155 a0001c0002t0001g0163 a0001c0002t0001g0167 a0001c0002t0001g0169 a0001c0002t0001g0173 a0001c0002t0001g0175 a0001c0002t0001g0176 a0001c0002t0001g0179 a0001c0002t0001g0182 a0001c0002t0001g0207 a0001c0002t0001g0220 a0001c0002t0001g0226 a0001c0002t0001g0227 a0001c0002t0001g0229 a0001c0002t0001g0233 a0001c0002t0002g0052 a0001c0002t0002g0166 a0001c0002t0002g0168 a0001c0002t0002g0172 a0001c0002t0004g0050 a0001c0002t0004g0055 a0001c0002t0004g0075 a0001c0002t0004g0082 a0001c0002t0004g0091 a0001c0002t0004g0106 a0001c0002t0004g0108 a0001c0002t0004g0115 a0001c0002t0004g0120 a0001c0002t0004g0143 a0001c0002t0004g0154 a0001c0002t0004g0162 a0001c0002t0004g0171 a0001c0002t0004g0177 a0001c0002t0004g0178 a0001c0002t0004g0180 a0001c0002t0004g0219 a0001c0002t0006g0312 a0001c0002t0006g0314 a0001c0002t0006g0320 a0001c0002t0006g0324 a0001c0002t0007g0008 a0001c0002t0007g0311 a0001c0002t0007g0313 a0001c0002t0008g0333 a0001c0002t0010g0290 a0001c0002t0010g0292 a0001c0002t0010g0293 a0001c0002t0011g0294 a0001c0002t0017g0070 a0001c0002t0017g0170 a0001c0002t0018g0018 a0001c0002t0030g0302 a0001c0007t0012g0012 a0001c0008t0009g0198 a0001c0010t0002g0019 a0001c0010t0002g0221 a0001c0019t0001g0103 a0002c0003t0001g0020 a0002c0003t0001g0064 a0002c0003t0001g0076 a0002c0003t0001g0084 a0002c0003t0001g0210 a0002c0003t0001g0213 a0002c0003t0002g0199 a0002c0003t0002g0234 a0002c0003t0002g0235 a0002c0003t0003g0002 a0002c0003t0003g0015 a0002c0003t0003g0030 a0002c0003t0003g0056 a0002c0003t0003g0057 a0002c0003t0003g0067 a0002c0003t0003g0081 a0002c0003t0003g0087 a0002c0003t0003g0090 a0002c0003t0003g0123 a0002c0003t0003g0128 a0002c0003t0003g0131 a0002c0003t0003g0132 a0002c0003t0003g0181 a0002c0003t0003g0230 a0002c0003t0003g0244 a0002c0003t0003g0280 a0002c0003t0004g0006 a0002c0003t0004g0236 a0002c0003t0004g0237 a0002c0003t0009g0104 a0002c0003t0009g0275 a0002c0003t0009g0277 a0002c0003t0014g0297 a0002c0003t0023g0077 a0002c0003t0025g0282 a0002c0003t0027g0296 a0002c0004t0001g0013 a0002c0004t0001g0111 a0002c0004t0002g0100 a0002c0004t0003g0005 a0002c0004t0003g0016 a0002c0004t0003g0017 a0002c0004t0003g0048 a0002c0004t0003g0060 a0002c0004t0003g0065 a0002c0004t0003g0088 a0002c0004t0003g0105 a0002c0004t0003g0116 a0002c0004t0003g0121 a0002c0004t0003g0156 a0002c0004t0003g0211 a0002c0004t0003g0218 a0002c0004t0003g0231 a0002c0004t0003g0232 a0002c0004t0006g0325 a0002c0004t0008g0303 a0002c0004t0015g0318 a0002c0004t0015g0323 a0002c0004t0015g0328 a0002c0005t0003g0010 a0002c0005t0003g0028 a0002c0005t0003g0276 a0002c0005t0004g0029 a0002c0005t0004g0092 a0002c0005t0004g0097 a0002c0005t0004g0101 a0002c0005t0004g0102 a0002c0005t0004g0184 a0002c0005t0011g0286 a0002c0006t0005g0033 a0002c0009t0003g0174 a0002c0009t0003g0209 a0002c0012t0003g0205 a0002c0012t0020g0208 a0002c0016t0004g0031 a0004c0013t0001g0183 a0006c0020t0002g0188 a0008c0014t0001g0079	245	257	0.9533	-18	c.97- others(35): Show c.97-24493_97-24476delACACACACACACACACAC	SLCO2A1	ENSG00000174640.15	transcript	ENST00000310926.11	protein_coding	1/13			chr3	TogoVar
SLCO2A1_chr3_133927701_134034925	134029510	TCACACAC others(11): Show TCACACACACACACGCTCA	T T	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02622.hp2 HG02896.hp1 others(3): Show HG01496.hp1 HG02622.hp2 HG02896.hp1 HG03471.hp1 HG03579.hp1 NA18965.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0007 a0002c0003 others(2): Show a0001c0001 a0001c0007 a0002c0003 a0002c0005 a0002c0006	a0001c0001t0013 a0001c0007t0012 a0002c0003t0003 others(3): Show a0001c0001t0013 a0001c0007t0012 a0002c0003t0003 a0002c0005t0003 a0002c0005t0004 a0002c0006t0005	a0001c0001t0013g0022 a0001c0007t0012g0012 a0002c0003t0003g0015 others(3): Show a0001c0001t0013g0022 a0001c0007t0012g0012 a0002c0003t0003g0015 a0002c0005t0003g0010 a0002c0005t0004g0009 a0002c0006t0005g0021	6	296	0.0203	-18	c.96+ others(31): Show c.96+179_96+196delTGAGCGTGTGTGTGTGTG	SLCO2A1	ENSG00000174640.15	transcript	ENST00000310926.11	protein_coding	1/13			chr3	TogoVar
SLCO3A1_chr15_91848708_92170903	91971804	GCAGCAGT others(11): Show GCAGCAGTGGCTCCGTATT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00323.hp1 others(39): Show HG00099.hp1 HG00280.hp2 HG00323.hp1 HG00621.hp1 HG00733.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01168.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01517.hp1 HG01517.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02486.hp2 HG02602.hp1 HG02683.hp1 HG02895.hp1 HG03239.hp2 HG03516.hp2 HG03942.hp1 HG04184.hp1 HG06807.hp1 NA18612.hp2 NA18906.hp1 NA18939.hp1 NA18946.hp1 NA18970.hp1 NA18970.hp2 NA18986.hp1 NA18991.hp2 NA19007.hp2 NA19081.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0002c0003 a0002c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0016 a0001c0001t0018 a0001c0001t0021 a0001c0001t0024 a0001c0001t0051 a0001c0001t0060 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0015 a0001c0002t0020 a0001c0004t0004 a0001c0006t0004 a0002c0003t0001 a0002c0003t0002 a0002c0005t0009	a0001c0001t0001g0023 a0001c0001t0001g0055 a0001c0001t0001g0080 others(39): Show a0001c0001t0001g0023 a0001c0001t0001g0055 a0001c0001t0001g0080 a0001c0001t0001g0108 a0001c0001t0001g0114 a0001c0001t0001g0122 a0001c0001t0001g0143 a0001c0001t0002g0081 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0115 a0001c0001t0002g0154 a0001c0001t0003g0053 a0001c0001t0003g0101 a0001c0001t0003g0144 a0001c0001t0004g0086 a0001c0001t0005g0060 a0001c0001t0008g0106 a0001c0001t0016g0118 a0001c0001t0018g0077 a0001c0001t0021g0090 a0001c0001t0021g0139 a0001c0001t0024g0025 a0001c0001t0051g0167 a0001c0001t0060g0177 a0001c0002t0001g0061 a0001c0002t0001g0091 a0001c0002t0002g0103 a0001c0002t0002g0134 a0001c0002t0002g0145 a0001c0002t0002g0149 a0001c0002t0003g0071 a0001c0002t0006g0160 a0001c0002t0015g0175 a0001c0002t0015g0178 a0001c0002t0020g0142 a0001c0004t0004g0094 a0001c0006t0004g0041 a0001c0006t0004g0113 a0002c0003t0001g0072 a0002c0003t0002g0100 a0002c0005t0009g0176	42	188	0.2234	-18	c.646 others(37): Show c.646+55367_646+55384delGCAGTGGCTCCGTATTCA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO5A1_chr8_69662046_69839978	69834086	CCACACAC others(11): Show CCACACACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0119 a0002c0002t0004g0119	1	92	0.0109	-18	c.-49 others(35): Show c.-497+750_-497+767delTGTGTGTGTGTGTGTGTG	SLCO5A1	ENSG00000137571.11	transcript	ENST00000260126.9	protein_coding	1/9			chr8	TogoVar
SLCO5A1_chr8_69662046_69839978	69834735	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp1 NA18906.hp2 NA20129.hp2 HG02622.hp1 NA18906.hp2 NA20129.hp2	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0001 a0005c0007t0009 a0005c0007t0058 a0005c0007t0001 a0005c0007t0009 a0005c0007t0058	a0005c0007t0001g0003 a0005c0007t0009g0002 a0005c0007t0058g0004 a0005c0007t0001g0003 a0005c0007t0009g0002 a0005c0007t0058g0004	3	11	0.2727	-18	c.-49 others(35): Show c.-497+101_-497+118delGTGTGTGTGTGTGTGTGT	SLCO5A1	ENSG00000137571.11	transcript	ENST00000260126.9	protein_coding	1/9			chr8	TogoVar
SLCO6A1_chr5_102366774_102504001	102370280	ATATATAT others(11): Show ATATATATATATATATGTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0101 a0002c0003t0001g0101	1	340	0.0029	-18	c.18 others(29): Show c.1841_*1858delCACATATATATATATATA	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding		1493		chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102460899	CATATATA others(11): Show CATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01516.hp1 HG01175.hp2 HG01516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0243 a0001c0001t0001g0244	2	21	0.0952	-18	c.900 others(35): Show c.900-1140_900-1123delATATATATATATATATAT	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding	4/13			chr5	TogoVar
SLF1_chr5_94613669_94702621	94627585	CATATATA others(11): Show CATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02486.hp2 HG06807.hp1 HG01891.hp2 HG02486.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0070 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0070 a0001c0001t0003g0076 a0001c0001t0003g0077	3	140	0.0214	-18	c.1-1 others(31): Show c.1-1208_1-1191delTATATATATATATATATA	SLF1	ENSG00000133302.13	transcript	ENST00000265140.10	protein_coding	1/20		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLF2_chr10_100907963_100970134	100957330	ATTTTTTT others(11): Show ATTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp1 HG00733.hp1 others(50): Show HG00140.hp2 HG00639.hp1 HG00733.hp1 HG01070.hp2 HG01081.hp2 HG01099.hp1 HG01169.hp2 HG01175.hp2 HG01256.hp2 HG01258.hp1 HG01261.hp1 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01928.hp2 HG01934.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG02004.hp1 HG02004.hp2 HG02257.hp2 HG02273.hp1 HG02300.hp1 HG02683.hp1 HG02809.hp1 HG03130.hp2 HG03139.hp1 HG03239.hp2 HG03471.hp1 HG03491.hp2 HG03516.hp2 HG03704.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG06807.hp1 NA18906.hp1 NA18906.hp2 NA18952.hp2 NA18982.hp2 NA18984.hp2 NA19004.hp1 NA19030.hp2 NA19068.hp2 NA19074.hp2 NA20905.hp1 NA21309.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0008	a0001c0001 a0002c0002 a0002c0004 others(2): Show a0001c0001 a0002c0002 a0002c0004 a0005c0008 a0008c0016	a0001c0001t0001 a0002c0002t0001 a0002c0002t0005 others(4): Show a0001c0001t0001 a0002c0002t0001 a0002c0002t0005 a0002c0002t0023 a0002c0004t0001 a0005c0008t0001 a0008c0016t0001	a0001c0001t0001g0072 a0001c0001t0001g0092 a0001c0001t0001g0113 others(44): Show a0001c0001t0001g0072 a0001c0001t0001g0092 a0001c0001t0001g0113 a0001c0001t0001g0131 a0002c0002t0001g0001 a0002c0002t0001g0007 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0025 a0002c0002t0001g0123 a0002c0002t0001g0124 a0002c0002t0001g0259 a0002c0002t0001g0261 a0002c0002t0001g0262 a0002c0002t0001g0263 a0002c0002t0001g0270 a0002c0002t0001g0272 a0002c0002t0001g0273 a0002c0002t0001g0274 a0002c0002t0001g0276 a0002c0002t0001g0277 a0002c0002t0001g0279 a0002c0002t0001g0280 a0002c0002t0001g0281 a0002c0002t0001g0282 a0002c0002t0001g0283 a0002c0002t0001g0285 a0002c0002t0001g0286 a0002c0002t0001g0287 a0002c0002t0001g0288 a0002c0002t0001g0289 a0002c0002t0001g0290 a0002c0002t0001g0291 a0002c0002t0001g0292 a0002c0002t0001g0293 a0002c0002t0005g0001 a0002c0002t0005g0007 a0002c0002t0005g0025 a0002c0002t0005g0268 a0002c0002t0005g0278 a0002c0002t0005g0284 a0002c0002t0023g0008 a0002c0004t0001g0008 a0002c0004t0001g0275 a0005c0008t0001g0225 a0005c0008t0001g0226 a0008c0016t0001g0267	53	86	0.6163	-18	c.341 others(35): Show c.3417+813_3417+830delTTTTTTTTTTTTTTTTTT	SLF2	ENSG00000119906.13	transcript	ENST00000238961.9	protein_coding	18/19		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLF2_chr10_100907963_100970134	100960998	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0151 a0001c0001t0017g0151	1	113	0.0088	-18	c.348 others(35): Show c.3487-867_3487-850delTTTTTTTTTTTTTTTTTT	SLF2	ENSG00000119906.13	transcript	ENST00000238961.9	protein_coding	19/19		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLFN11_chr17_35345305_35378621	35378447	GTATATAT others(11): Show GTATATATATATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19081.hp1 NA19081.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0244 a0001c0002t0002g0244	1	78	0.0128	-18	c.-52 others(29): Show c.-5226_-5209delTATATATATATATATATA	SLFN11	ENSG00000172716.17	transcript	ENST00000685675.1	protein_coding		4827		chr17	TogoVar
SLFN12L_chr17_35459254_35542678	35530423	AAGGAAGG others(11): Show AAGGAAGGGAAGGGAAGGG	A A	intron_variant intron_variant	MODIFIER	NA18980.hp2 NA18980.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0003 a0004c0004t0003	a0004c0004t0003g0212 a0004c0004t0003g0212	1	201	0.0050	-18	c.-60 others(37): Show c.-606+7132_-606+7149delCCCTTCCCTTCCCTTCCT	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	1/4			chr17	TogoVar
SLIT1_chr10_96993038_97190959	97108886	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01433.hp1 HG00741.hp2 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0235 a0001c0001t0001g0062 a0001c0001t0001g0235	2	53	0.0377	-18	c.414 others(37): Show c.414-42818_414-42801delTTTTTTTTTTTTTTTTTT	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	4/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166567	GAGAGAAA others(11): Show GAGAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0004 a0004	a0004c0027 a0004c0027	a0004c0027t0025 a0004c0027t0025	a0004c0027t0025g0220 a0004c0027t0025g0220	1	254	0.0039	-18	c.198 others(35): Show c.198-1695_198-1678delTTCTTTCTTTCTTTCTCT	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT2_chr4_20246905_20625561	20305872	AAATAATA others(11): Show AAATAATAATAATAATAAT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0121 a0001c0002t0002g0121	1	30	0.0333	-18	c.395 others(37): Show c.395+37025_395+37042delAATAATAATAATAATAAT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20315002	CTGTAATA others(11): Show CTGTAATAAAATAATTAAT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00408.hp2 HG00423.hp2 others(54): Show HG00280.hp2 HG00408.hp2 HG00423.hp2 HG00558.hp2 HG00609.hp1 HG00642.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01109.hp2 HG01123.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp1 HG01361.hp1 HG01496.hp1 HG01516.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG02015.hp2 HG02055.hp2 HG02083.hp1 HG02132.hp1 HG02132.hp2 HG02155.hp1 HG02165.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02738.hp2 HG02886.hp1 HG03017.hp2 HG03453.hp2 HG03688.hp2 HG03710.hp2 HG04184.hp2 HG04228.hp1 NA18941.hp2 NA18944.hp2 NA18952.hp2 NA18964.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18990.hp2 NA19010.hp2 NA19060.hp1 NA19063.hp1 NA19078.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0007	a0001c0001 a0001c0002 a0001c0003 others(7): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0008 a0002c0009 a0004c0018 a0007c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0015 a0001c0001t0020 a0001c0001t0039 a0001c0001t0047 a0001c0001t0066 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0009 a0001c0002t0029 a0001c0002t0048 a0001c0002t0049 a0001c0003t0001 a0001c0003t0006 a0001c0003t0028 a0001c0003t0050 a0001c0004t0002 a0001c0004t0041 a0001c0005t0033 a0001c0006t0042 a0001c0008t0001 a0002c0009t0001 a0004c0018t0005 a0007c0015t0002	a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0081 others(54): Show a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0081 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0001g0122 a0001c0001t0002g0074 a0001c0001t0002g0117 a0001c0001t0002g0131 a0001c0001t0003g0101 a0001c0001t0003g0103 a0001c0001t0005g0097 a0001c0001t0005g0119 a0001c0001t0005g0137 a0001c0001t0005g0163 a0001c0001t0006g0082 a0001c0001t0006g0127 a0001c0001t0015g0002 a0001c0001t0015g0096 a0001c0001t0020g0095 a0001c0001t0020g0130 a0001c0001t0039g0142 a0001c0001t0047g0068 a0001c0001t0066g0035 a0001c0002t0001g0076 a0001c0002t0001g0109 a0001c0002t0001g0116 a0001c0002t0001g0118 a0001c0002t0002g0075 a0001c0002t0002g0077 a0001c0002t0002g0080 a0001c0002t0002g0112 a0001c0002t0002g0132 a0001c0002t0003g0139 a0001c0002t0009g0102 a0001c0002t0029g0155 a0001c0002t0029g0156 a0001c0002t0048g0110 a0001c0002t0049g0069 a0001c0003t0001g0098 a0001c0003t0006g0100 a0001c0003t0006g0141 a0001c0003t0028g0013 a0001c0003t0050g0114 a0001c0004t0002g0124 a0001c0004t0041g0073 a0001c0005t0033g0083 a0001c0005t0033g0134 a0001c0006t0042g0084 a0001c0008t0001g0138 a0002c0009t0001g0111 a0004c0018t0005g0136 a0007c0015t0002g0072	57	228	0.2500	-18	c.395 others(37): Show c.395+46123_395+46140delGTAATAAAATAATTAATT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20354902	TGTGTGAG others(11): Show TGTGTGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0055 a0001c0002t0055	a0001c0002t0055g0144 a0001c0002t0055g0144	1	147	0.0068	-18	c.395 others(37): Show c.395+86023_395+86040delTGTGAGAGAGAGAGAGAG	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20463448	GATATATA others(11): Show GATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG03942.hp2 HG02698.hp1 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0037 a0001c0004t0002 a0001c0001t0037 a0001c0004t0002	a0001c0001t0037g0187 a0001c0004t0002g0124 a0001c0001t0037g0187 a0001c0004t0002g0124	2	47	0.0426	-18	c.396 others(35): Show c.396-4277_396-4260delATATATATATATATATAT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20518577	ATATATAT others(11): Show ATATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0164 a0001c0001t0019g0164	1	226	0.0044	-18	c.105 others(35): Show c.1059-803_1059-786delATATATATATTTTTTTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20593991	TACATATA others(11): Show TACATATACACACACATAC	T T	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02886.hp1 HG03098.hp2 HG02717.hp2 HG02886.hp1 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0016 a0001c0002t0029 a0001c0005t0079 a0001c0002t0016 a0001c0002t0029 a0001c0005t0079	a0001c0002t0016g0126 a0001c0002t0029g0156 a0001c0005t0079g0162 a0001c0002t0016g0126 a0001c0002t0029g0156 a0001c0005t0079g0162	3	228	0.0132	-18	c.318 others(37): Show c.3183-1704_3183-1687delCATATACACACACATACA	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	30/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT3_chr5_168656740_169306139	168703226	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0002 a0002	a0002c0029 a0002c0029	a0002c0029t0005 a0002c0029t0005	a0002c0029t0005g0015 a0002c0029t0005g0015	1	27	0.0370	-18	c.284 others(37): Show c.2845-2565_2845-2548delCACACACACACACACACA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	26/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168718677	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0002 a0002	a0002c0062 a0002c0062	a0002c0062t0029 a0002c0062t0029	a0002c0062t0029g0032 a0002c0062t0029g0032	1	17	0.0588	-18	c.248 others(37): Show c.2483+3561_2483+3578delGTGTGTGTGTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	23/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168726337	GTGGAGAG others(11): Show GTGGAGAGGGAGGCAGGGA	G G	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00735.hp2 HG01192.hp2 others(20): Show HG00408.hp1 HG00735.hp2 HG01192.hp2 HG01255.hp1 HG01433.hp2 HG02015.hp1 HG02027.hp1 HG02071.hp1 HG02129.hp1 HG02135.hp2 HG02451.hp1 HG03017.hp2 HG03927.hp1 HG04115.hp1 NA18970.hp1 NA18974.hp1 NA18989.hp1 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19060.hp2 NA19066.hp1 NA20129.hp1	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0006 a0007	a0001c0001 a0001c0006 a0001c0009 others(11): Show a0001c0001 a0001c0006 a0001c0009 a0001c0014 a0001c0042 a0001c0051 a0001c0054 a0001c0058 a0002c0008 a0002c0021 a0002c0030 a0005c0063 a0006c0034 a0007c0045	a0001c0001t0024 a0001c0006t0002 a0001c0006t0009 others(15): Show a0001c0001t0024 a0001c0006t0002 a0001c0006t0009 a0001c0006t0033 a0001c0009t0012 a0001c0014t0002 a0001c0014t0009 a0001c0042t0032 a0001c0051t0012 a0001c0054t0002 a0001c0058t0009 a0002c0008t0002 a0002c0021t0002 a0002c0021t0025 a0002c0030t0002 a0005c0063t0002 a0006c0034t0012 a0007c0045t0002	a0001c0001t0024g0069 a0001c0006t0002g0039 a0001c0006t0002g0043 others(20): Show a0001c0001t0024g0069 a0001c0006t0002g0039 a0001c0006t0002g0043 a0001c0006t0009g0113 a0001c0006t0033g0120 a0001c0009t0012g0035 a0001c0014t0002g0028 a0001c0014t0009g0112 a0001c0014t0009g0121 a0001c0042t0032g0130 a0001c0051t0012g0005 a0001c0054t0002g0044 a0001c0058t0009g0097 a0002c0008t0002g0017 a0002c0008t0002g0020 a0002c0008t0002g0023 a0002c0008t0002g0042 a0002c0021t0002g0061 a0002c0021t0025g0056 a0002c0030t0002g0033 a0005c0063t0002g0036 a0006c0034t0012g0046 a0007c0045t0002g0079	23	132	0.1742	-18	c.227 others(37): Show c.2271-1871_2271-1854delTCCCTGCCTCCCTCTCCA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168735661	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0009 a0001c0014t0009	a0001c0014t0009g0121 a0001c0014t0009g0121	1	32	0.0313	-18	c.227 others(39): Show c.2271-11195_2271-11178delGTGTGTGTGTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168834686	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00735.hp1 HG01081.hp2 others(31): Show HG00408.hp1 HG00735.hp1 HG01081.hp2 HG01109.hp1 HG01192.hp2 HG01433.hp1 HG01934.hp2 HG01993.hp1 HG02717.hp2 HG02735.hp2 HG02886.hp2 HG02896.hp1 HG03098.hp1 HG03098.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03516.hp1 HG03516.hp2 HG04115.hp1 NA18522.hp1 NA18747.hp2 NA18957.hp1 NA18974.hp1 NA18974.hp2 NA19005.hp1 NA19007.hp2 NA19012.hp2 NA19060.hp2 NA19066.hp1 NA19066.hp2 NA20129.hp2 NA20805.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0006 a0010 a0012 a0013	a0001c0001 a0001c0004 a0001c0006 others(22): Show a0001c0001 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0013 a0001c0017 a0001c0037 a0001c0058 a0002c0002 a0002c0005 a0002c0008 a0002c0018 a0002c0029 a0002c0030 a0002c0043 a0002c0044 a0003c0033 a0003c0055 a0004c0036 a0006c0034 a0010c0023 a0012c0022 a0013c0027	a0001c0001t0001 a0001c0001t0003 a0001c0004t0010 others(28): Show a0001c0001t0001 a0001c0001t0003 a0001c0004t0010 a0001c0006t0002 a0001c0006t0033 a0001c0007t0014 a0001c0009t0003 a0001c0010t0008 a0001c0013t0001 a0001c0017t0001 a0001c0037t0001 a0001c0058t0009 a0002c0002t0005 a0002c0002t0017 a0002c0002t0018 a0002c0002t0023 a0002c0005t0003 a0002c0005t0026 a0002c0008t0002 a0002c0018t0007 a0002c0029t0005 a0002c0030t0002 a0002c0043t0027 a0002c0044t0007 a0003c0033t0007 a0003c0055t0010 a0004c0036t0010 a0006c0034t0012 a0010c0023t0005 a0012c0022t0022 a0013c0027t0010	a0001c0001t0001g0041 a0001c0001t0001g0081 a0001c0001t0001g0083 others(31): Show a0001c0001t0001g0041 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0003g0110 a0001c0004t0010g0131 a0001c0006t0002g0039 a0001c0006t0033g0120 a0001c0007t0014g0055 a0001c0009t0003g0117 a0001c0010t0008g0068 a0001c0013t0001g0091 a0001c0017t0001g0029 a0001c0037t0001g0021 a0001c0058t0009g0097 a0002c0002t0005g0082 a0002c0002t0017g0119 a0002c0002t0018g0107 a0002c0002t0023g0086 a0002c0005t0003g0114 a0002c0005t0003g0128 a0002c0005t0026g0030 a0002c0008t0002g0023 a0002c0018t0007g0100 a0002c0029t0005g0015 a0002c0030t0002g0033 a0002c0043t0027g0052 a0002c0044t0007g0101 a0003c0033t0007g0108 a0003c0055t0010g0115 a0004c0036t0010g0129 a0006c0034t0012g0046 a0010c0023t0005g0085 a0012c0022t0022g0004 a0013c0027t0010g0125	34	55	0.6182	-18	c.557 others(35): Show c.557+9880_557+9897delTTTTTTTTTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	6/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168994623	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0002 a0002	a0002c0011 a0002c0011	a0002c0011t0007 a0002c0011t0007	a0002c0011t0007g0116 a0002c0011t0007g0116	1	17	0.0588	-18	c.414 others(39): Show c.414-111305_414-111288delAAAAAAAAAAAAAAAAAA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169015931	AACACACA others(11): Show AACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02896.hp2 HG02897.hp2 others(2): Show HG02145.hp2 HG02896.hp2 HG02897.hp2 HG03098.hp2 NA20129.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0004 a0001c0050 a0002c0011 others(1): Show a0001c0004 a0001c0050 a0002c0011 a0004c0036	a0001c0004t0010 a0001c0050t0020 a0002c0011t0005 others(1): Show a0001c0004t0010 a0001c0050t0020 a0002c0011t0005 a0004c0036t0010	a0001c0004t0010g0131 a0001c0050t0020g0003 a0002c0011t0005g0065 others(2): Show a0001c0004t0010g0131 a0001c0050t0020g0003 a0002c0011t0005g0065 a0002c0011t0005g0075 a0004c0036t0010g0129	5	54	0.0926	-18	c.414 others(39): Show c.414-132613_414-132596delGTGTGTGTGTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169015969	CACACACA others(11): Show CACACACACACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01496.hp1 HG01081.hp2 HG01496.hp1	a0001 a0002 a0001 a0002	a0001c0010 a0002c0005 a0001c0010 a0002c0005	a0001c0010t0008 a0002c0005t0026 a0001c0010t0008 a0002c0005t0026	a0001c0010t0008g0071 a0002c0005t0026g0030 a0001c0010t0008g0071 a0002c0005t0026g0030	2	132	0.0152	-18	c.414 others(39): Show c.414-132651_414-132634delTTGTGTGTGTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169189526	GGATATAT others(11): Show GGATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02129.hp1 NA18970.hp2 NA18989.hp2 HG02129.hp1 NA18970.hp2 NA18989.hp2	a0001 a0002 a0001 a0002	a0001c0009 a0002c0008 a0002c0060 a0001c0009 a0002c0008 a0002c0060	a0001c0009t0001 a0002c0008t0002 a0002c0060t0001 a0001c0009t0001 a0002c0008t0002 a0002c0060t0001	a0001c0009t0001g0057 a0002c0008t0002g0042 a0002c0060t0001g0058 a0001c0009t0001g0057 a0002c0008t0002g0042 a0002c0060t0001g0058	3	131	0.0229	-18	c.413 others(35): Show c.413+3935_413+3952delTATATATATATATATATC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169189527	GATATATA others(11): Show GATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01993.hp2 HG02027.hp2 others(2): Show HG01167.hp1 HG01993.hp2 HG02027.hp2 HG02135.hp2 NA18522.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0003 a0001c0014 others(1): Show a0001c0001 a0001c0003 a0001c0014 a0008c0035	a0001c0001t0001 a0001c0003t0007 a0001c0014t0009 others(1): Show a0001c0001t0001 a0001c0003t0007 a0001c0014t0009 a0008c0035t0004	a0001c0001t0001g0083 a0001c0001t0001g0090 a0001c0003t0007g0098 others(2): Show a0001c0001t0001g0083 a0001c0001t0001g0090 a0001c0003t0007g0098 a0001c0014t0009g0112 a0008c0035t0004g0049	5	18	0.2778	-18	c.413 others(35): Show c.413+3934_413+3951delATATATATATATATATAT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLITRK5_chr13_87666371_87684616	87672854	GGTGTGTG others(11): Show GGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02683.hp2 NA18970.hp2 HG01099.hp2 HG02683.hp2 NA18970.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0009c0007 a0001c0001 a0009c0007	a0001c0001t0002 a0001c0001t0003 a0009c0007t0001 a0001c0001t0002 a0001c0001t0003 a0009c0007t0001	a0001c0001t0002g0002 a0001c0001t0003g0003 a0009c0007t0001g0001 a0001c0001t0002g0002 a0001c0001t0003g0003 a0009c0007t0001g0001	3	71	0.0423	-18	c.-9+ others(31): Show c.-9+682_-9+699delGTGTGTGTGTGTGTGTGT	SLITRK5	ENSG00000165300.8	transcript	ENST00000683689.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
SLK_chr10_103962140_104034233	103963713	ATATATAT others(11): Show ATATATATATATATATATT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00738.hp1 HG02083.hp1 others(17): Show HG00438.hp1 HG00738.hp1 HG02083.hp1 HG02129.hp1 HG02602.hp1 HG02683.hp1 HG02965.hp1 HG03239.hp1 HG03491.hp2 HG03688.hp1 HG03710.hp1 HG03831.hp1 HG04204.hp2 NA18939.hp1 NA18953.hp2 NA18986.hp2 NA18991.hp2 NA19005.hp1 NA19091.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0026 a0001c0001t0006 a0001c0001t0026	a0001c0001t0006g0009 a0001c0001t0006g0131 a0001c0001t0006g0132 others(16): Show a0001c0001t0006g0009 a0001c0001t0006g0131 a0001c0001t0006g0132 a0001c0001t0006g0133 a0001c0001t0006g0134 a0001c0001t0006g0135 a0001c0001t0006g0136 a0001c0001t0006g0137 a0001c0001t0006g0138 a0001c0001t0006g0139 a0001c0001t0006g0140 a0001c0001t0006g0142 a0001c0001t0006g0143 a0001c0001t0006g0144 a0001c0001t0006g0145 a0001c0001t0006g0146 a0001c0001t0006g0147 a0001c0001t0006g0197 a0001c0001t0026g0141	20	374	0.0535	-18	c.-40 others(29): Show c.-4032_-4015delTATATATATATATATATT	SLK	ENSG00000065613.15	transcript	ENST00000369755.4	protein_coding		3426		chr10	TogoVar
SLMAP_chr3_57751309_57935003	57835875	CAAAACAA others(11): Show CAAAACAATACTATATAGT	C C	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02615.hp1 HG02647.hp1 others(5): Show HG01934.hp1 HG02615.hp1 HG02647.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0016 a0001c0001t0033 a0001c0001t0010 a0001c0001t0016 a0001c0001t0033	a0001c0001t0010g0300 a0001c0001t0010g0301 a0001c0001t0010g0302 others(5): Show a0001c0001t0010g0300 a0001c0001t0010g0301 a0001c0001t0010g0302 a0001c0001t0010g0303 a0001c0001t0016g0005 a0001c0001t0016g0006 a0001c0001t0016g0007 a0001c0001t0033g0305	8	308	0.0260	-18	c.346 others(35): Show c.346+4346_346+4363delAAAACAATACTATATAGT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	3/24			chr3	TogoVar
SLMAP_chr3_57751309_57935003	57885771	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG01891.hp1 HG02970.hp2 HG01255.hp2 HG01891.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0139 a0001c0001t0015g0174 a0001c0001t0015g0175 a0001c0001t0015g0139 a0001c0001t0015g0174 a0001c0001t0015g0175	3	37	0.0811	-18	c.130 others(37): Show c.1301-4257_1301-4240delTTTTTTTTTTTTTTTTTT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	14/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLURP1_chr8_142735949_142747406	142739874	TGGCCAAC others(11): Show TGGCCAACGGGGAGGCCCG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	400	0.0025	-18	c.12 others(29): Show c.1251_*1268delCGGGCCTCCCCGTTGGCC	SLURP1	ENSG00000126233.2	transcript	ENST00000246515.2	protein_coding		1074		chr8	TogoVar
SLURP2_chr8_142759338_142774828	142762995	TGCCTGGG others(11): Show TGCCTGGGCGTGGAATTTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02293.hp2 HG02293.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	443	0.0023	-18	c.15 others(29): Show c.1592_*1609delCAAATTCCACGCCCAGGC	SLURP2	ENSG00000283992.2	transcript	ENST00000317543.12	protein_coding		1342		chr8	TogoVar
SMAD2_chr18_47803957_47935659	47820896	TACACACA others(11): Show TACACACACACACACACAC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp2 HG01257.hp2 HG01258.hp2 others(3): Show HG00099.hp2 HG01257.hp2 HG01258.hp2 HG01943.hp2 HG01993.hp2 HG02132.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0017 a0001c0001t0076 others(3): Show a0001c0001t0016 a0001c0001t0017 a0001c0001t0076 a0001c0001t0077 a0001c0001t0135 a0001c0001t0188	a0001c0001t0016g0266 a0001c0001t0017g0289 a0001c0001t0076g0281 others(3): Show a0001c0001t0016g0266 a0001c0001t0017g0289 a0001c0001t0076g0281 a0001c0001t0077g0282 a0001c0001t0135g0267 a0001c0001t0188g0049	6	22	0.2727	-18	c.20 others(31): Show c.20913_*20930delGTGTGTGTGTGTGTGTGT	SMAD2	ENSG00000175387.16	transcript	ENST00000262160.11	protein_coding	11/11	20913		chr18	TogoVar
SMAD2_chr18_47803957_47935659	47919469	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02155.hp1 NA18984.hp2 HG02055.hp1 HG02155.hp1 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0149 a0001c0001t0237 a0001c0001t0003 a0001c0001t0149 a0001c0001t0237	a0001c0001t0003g0169 a0001c0001t0149g0132 a0001c0001t0237g0123 a0001c0001t0003g0169 a0001c0001t0149g0132 a0001c0001t0237g0123	3	32	0.0938	-18	c.-54 others(37): Show c.-54+10874_-54+10891delGTGTGTGTGTGTGTGTGT	SMAD2	ENSG00000175387.16	transcript	ENST00000262160.11	protein_coding	1/10			chr18	TogoVar
SMAD3_chr15_67060602_67200169	67085883	CACACACA others(11): Show CACACACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0172 a0001c0002t0003g0172	1	308	0.0032	-18	c.206 others(37): Show c.206+19529_206+19546delCACACACACACATACACA	SMAD3	ENSG00000166949.17	transcript	ENST00000327367.9	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr15	TogoVar
SMAD4_chr18_51025213_51090042	51084004	GCGCGCGC others(11): Show GCGCGCGCGCACACACACA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00558.hp2 HG02280.hp2 HG06807.hp2 HG00558.hp2 HG02280.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0014 a0001c0001t0002 a0001c0001t0014	a0001c0001t0002g0082 a0001c0001t0014g0035 a0001c0001t0014g0036 a0001c0001t0002g0082 a0001c0001t0014g0035 a0001c0001t0014g0036	3	208	0.0144	-18	c.55 others(29): Show c.5539_*5556delGCGCGCGCACACACACAC	SMAD4	ENSG00000141646.16	transcript	ENST00000342988.8	protein_coding	12/12	5539	INFO_REALIGN_3_PRIME	chr18	TogoVar
SMAD9_chr13_36839831_36925238	36882243	GTGTGTGT others(11): Show GTGTGTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02145.hp2 HG02559.hp2 others(7): Show HG01243.hp2 HG02145.hp2 HG02559.hp2 HG02630.hp2 HG02809.hp1 HG02896.hp1 HG02976.hp2 HG06807.hp1 NA18522.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0008 a0001c0001t0021 others(2): Show a0001c0001t0007 a0001c0001t0008 a0001c0001t0021 a0001c0001t0032 a0001c0001t0034	a0001c0001t0007g0123 a0001c0001t0008g0121 a0001c0001t0008g0122 others(7): Show a0001c0001t0007g0123 a0001c0001t0008g0121 a0001c0001t0008g0122 a0001c0001t0008g0125 a0001c0001t0008g0126 a0001c0001t0008g0127 a0001c0001t0021g0160 a0001c0001t0021g0167 a0001c0001t0032g0124 a0001c0001t0034g0334	10	356	0.0281	-18	c.-18 others(37): Show c.-186-2386_-186-2369delTACACACACACACACACA	SMAD9	ENSG00000120693.15	transcript	ENST00000379826.5	protein_coding	1/6			chr13	TogoVar
SMAD9_chr13_36839831_36925238	36905774	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0051 a0001c0001t0051	a0001c0001t0051g0191 a0001c0001t0051g0191	1	21	0.0476	-18	c.-18 others(39): Show c.-187+14324_-187+14341delTTTTTTTTTTTTTTTTTT	SMAD9	ENSG00000120693.15	transcript	ENST00000379826.5	protein_coding	1/6			chr13	TogoVar
SMAGP_chr12_51239558_51275415	51246604	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	67	0.0149	-18	c.115 others(33): Show c.115+129_115+146delCACACACACACACACACA	SMAGP	ENSG00000170545.17	transcript	ENST00000603798.6	protein_coding	3/3			chr12	TogoVar

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