regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AHNAK2_chr14_104932253_104983374 | 104950104 | CCACGTCG others(488): Show |
C | conservative_inframe_deletion | MODERATE | HG02717.hp2 NA20129.hp2 |
a0074a0075 | a0074c0179a0075c0164 | a0074c0179t0003a0075c0164t0001 | a0074c0179t0003g0297a0075c0164t0001g0301 | 2 | 356 | 0.0056 | -495 | c.485 others(9): Show |
p.Lys others(15): Show |
AHNAK2 | ENSG00000185567.7 | transcript | ENST00000333244.6 | protein_coding | 7/7 | 5483/18335 | 4852/17388 | 1618/5795 | chr14 | TogoVar | ||
AHNAK2_chr14_104932253_104983374 | 104950411 | CGAGGCCT others(488): Show |
C | disruptive_inframe_deletion | MODERATE | NA18943.hp2 NA19055.hp1 |
a0043 | a0043c0040 | a0043c0040t0001 | a0043c0040t0001g0172a0043c0040t0001g0191 | 2 | 356 | 0.0056 | -495 | c.454 others(9): Show |
p.Val others(15): Show |
AHNAK2 | ENSG00000185567.7 | transcript | ENST00000333244.6 | protein_coding | 7/7 | 5176/18335 | 4545/17388 | 1515/5795 | chr14 | TogoVar | ||
AHNAK2_chr14_104932253_104983374 | 104950872 | CGTCGGCC others(488): Show |
C | conservative_inframe_deletion | MODERATE | HG03453.hp2 | a0163 | a0163c0098 | a0163c0098t0001 | a0163c0098t0001g0122 | 1 | 356 | 0.0028 | -495 | c.408 others(9): Show |
p.Met others(15): Show |
AHNAK2 | ENSG00000185567.7 | transcript | ENST00000333244.6 | protein_coding | 7/7 | 4715/18335 | 4084/17388 | 1362/5795 | chr14 | TogoVar | ||
AHNAK2_chr14_104932253_104983374 | 104950915 | GATGGACT others(488): Show |
G | disruptive_inframe_deletion | MODERATE | HG03225.hp2 | a0169 | a0169c0237 | a0169c0237t0003 | a0169c0237t0003g0139 | 1 | 356 | 0.0028 | -495 | c.404 others(9): Show |
p.Glu others(15): Show |
AHNAK2 | ENSG00000185567.7 | transcript | ENST00000333244.6 | protein_coding | 7/7 | 4672/18335 | 4041/17388 | 1347/5795 | chr14 | TogoVar | ||
AHNAK2_chr14_104932253_104983374 | 104951125 | GTCTTTTA others(488): Show |
G | disruptive_inframe_deletion | MODERATE | HG00609.hp1 HG02056.hp1 HG03130.hp1 others(3): Show |
a0020a0064a0066others(1): Show | a0020c0018a0064c0165a0066c0202others(1): Show | a0020c0018t0002a0064c0165t0001a0066c0202t0005others(1): Show | a0020c0018t0002g0009a0064c0165t0001g0247a0066c0202t0005g0203others(1): Show | 6 | 356 | 0.0169 | -495 | c.383 others(9): Show |
p.His others(15): Show |
AHNAK2 | ENSG00000185567.7 | transcript | ENST00000333244.6 | protein_coding | 7/7 | 4462/18335 | 3831/17388 | 1277/5795 | chr14 | TogoVar | ||
AHNAK2_chr14_104932253_104983374 | 104951155 | GTCTATTT others(488): Show |
G | disruptive_inframe_deletion | MODERATE | HG02630.hp1 | a0068 | a0068c0169 | a0068c0169t0002 | a0068c0169t0002g0071 | 1 | 356 | 0.0028 | -495 | c.380 others(9): Show |
p.Glu others(15): Show |
AHNAK2 | ENSG00000185567.7 | transcript | ENST00000333244.6 | protein_coding | 7/7 | 4432/18335 | 3801/17388 | 1267/5795 | chr14 | TogoVar | ||
AHNAK2_chr14_104932253_104983374 | 104951806 | GGGCTGAA others(488): Show |
G | disruptive_inframe_deletion | MODERATE | HG02922.hp2 | a0197 | a0197c0057 | a0197c0057t0001 | a0197c0057t0001g0068 | 1 | 356 | 0.0028 | -495 | c.315 others(9): Show |
p.Ala others(15): Show |
AHNAK2 | ENSG00000185567.7 | transcript | ENST00000333244.6 | protein_coding | 7/7 | 3781/18335 | 3150/17388 | 1050/5795 | chr14 | TogoVar | ||
ASAP1_chr8_130047104_130448674 | 130049774 | GGGGAACA others(488): Show |
G | downstream_gene_variant | MODIFIER | HG03654.hp1 | a0001 | a0001c0001 | a0001c0001t0014 | a0001c0001t0014g0049 | 1 | 308 | 0.0033 | -495 | c.*44 others(11): Show |
ASAP1 | ENSG00000153317.15 | transcript | ENST00000518721.6 | protein_coding | 2329 | chr8 | TogoVar | ||||||
ASMT_chrX_1610059_1648081 | 1639377 | CTGTGTGT others(488): Show |
C | intron_variant | MODIFIER | HG00735.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0157 | 1 | 223 | 0.0045 | -495 | c.910 others(17): Show |
ASMT | ENSG00000196433.13 | transcript | ENST00000381241.9 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
ASMT_chrX_1610059_1648081 | 1639488 | GTCCTGTG others(488): Show |
G | intron_variant | MODIFIER | NA19003.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0003 | 1 | 223 | 0.0045 | -495 | c.910 others(17): Show |
ASMT | ENSG00000196433.13 | transcript | ENST00000381241.9 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
ASMT_chrX_1610059_1648081 | 1639517 | ACATGAGG others(488): Show |
A | intron_variant | MODIFIER | HG00735.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0076 | 1 | 223 | 0.0045 | -495 | c.910 others(17): Show |
ASMT | ENSG00000196433.13 | transcript | ENST00000381241.9 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
ASMT_chrX_1610059_1648081 | 1640587 | ACATGAGG others(488): Show |
A | intron_variant | MODIFIER | HG01517.hp2 HG03195.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0158a0002c0002t0002g0191 | 2 | 223 | 0.0090 | -495 | c.911 others(17): Show |
ASMT | ENSG00000196433.13 | transcript | ENST00000381241.9 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
ASMT_chrX_1610059_1648081 | 1640878 | GTGTCCCA others(488): Show |
G | intron_variant | MODIFIER | HG01934.hp1 HG01978.hp2 HG02273.hp2 others(7): Show |
a0001a0002 | a0001c0003a0002c0002 | a0001c0003t0001a0001c0003t0002a0002c0002t0001others(1): Show | a0001c0003t0001g0080a0001c0003t0001g0115a0001c0003t0001g0193others(7): Show | 10 | 223 | 0.0448 | -495 | c.911 others(17): Show |
ASMT | ENSG00000196433.13 | transcript | ENST00000381241.9 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
CFAP46_chr10_132803392_132947570 | 132914022 | CCCCCGCC others(488): Show |
C | intron_variant | MODIFIER | HG00609.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0186 | 1 | 246 | 0.0041 | -495 | c.212 others(18): Show |
CFAP46 | ENSG00000171811.14 | transcript | ENST00000368586.10 | protein_coding | 17/57 | chr10 | TogoVar | ||||||
CFAP46_chr10_132803392_132947570 | 132914028 | CCCCGAGG others(488): Show |
C | intron_variant | MODIFIER | HG02698.hp1 | a0007 | a0007c0008 | a0007c0008t0002 | a0007c0008t0002g0095 | 1 | 246 | 0.0041 | -495 | c.212 others(18): Show |
CFAP46 | ENSG00000171811.14 | transcript | ENST00000368586.10 | protein_coding | 17/57 | chr10 | TogoVar | ||||||
CFAP46_chr10_132803392_132947570 | 132914094 | GCCCGAGG others(488): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp2 HG01106.hp1 others(3): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0032a0002c0002others(3): Show | a0001c0001t0002a0001c0032t0002a0002c0002t0001others(3): Show | a0001c0001t0002g0049a0001c0032t0002g0038a0002c0002t0001g0194others(3): Show | 6 | 246 | 0.0244 | -495 | c.212 others(18): Show |
CFAP46 | ENSG00000171811.14 | transcript | ENST00000368586.10 | protein_coding | 17/57 | chr10 | TogoVar | ||||||
CFAP46_chr10_132803392_132947570 | 132914127 | CCCCGAGG others(488): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG01256.hp1 HG03710.hp2 others(1): Show |
a0001a0002a0015 | a0001c0001a0002c0002a0015c0015 | a0001c0001t0002a0002c0002t0001a0015c0015t0002 | a0001c0001t0002g0037a0001c0001t0002g0071a0002c0002t0001g0184others(1): Show | 4 | 246 | 0.0163 | -495 | c.212 others(18): Show |
CFAP46 | ENSG00000171811.14 | transcript | ENST00000368586.10 | protein_coding | 17/57 | chr10 | TogoVar | ||||||
CROCC2_chr2_240901336_240998311 | 240978700 | GCTCATCC others(488): Show |
G | intron_variant | MODIFIER | HG02886.hp2 HG02965.hp1 HG03041.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004 | a0001c0001t0003g0003a0001c0001t0004g0303a0001c0001t0004g0319 | 4 | 350 | 0.0114 | -495 | c.440 others(19): Show |
CROCC2 | ENSG00000226321.6 | transcript | ENST00000690015.1 | protein_coding | 27/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CROCC2_chr2_240901336_240998311 | 240979549 | GCCCAGGC others(488): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp1 HG00544.hp1 others(84): Show |
a0002a0003a0006others(18): Show | a0002c0002a0002c0011a0002c0012others(24): Show | a0002c0002t0001a0002c0002t0002a0002c0011t0002others(29): Show | a0002c0002t0001g0083a0002c0002t0001g0120a0002c0002t0001g0131others(83): Show | 87 | 350 | 0.2486 | -495 | c.440 others(19): Show |
CROCC2 | ENSG00000226321.6 | transcript | ENST00000690015.1 | protein_coding | 27/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CROCC2_chr2_240901336_240998311 | 240980670 | AGGATCCC others(488): Show |
A | intron_variant | MODIFIER | HG00544.hp2 HG00558.hp2 HG00609.hp1 others(34): Show |
a0001a0005a0007others(5): Show | a0001c0001a0001c0022a0001c0067others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0022t0002others(11): Show | a0001c0001t0001g0058a0001c0001t0001g0082a0001c0001t0001g0084others(34): Show | 37 | 350 | 0.1057 | -495 | c.440 others(19): Show |
CROCC2 | ENSG00000226321.6 | transcript | ENST00000690015.1 | protein_coding | 27/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CUX1_chr7_101811007_102288958 | 102083713 | ACTATTTA others(488): Show |
A | intron_variant | MODIFIER | HG00544.hp1 HG00639.hp2 HG01099.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0002t0001a0002c0003t0002others(2): Show | a0001c0001t0001g0100a0001c0001t0001g0108a0001c0002t0001g0034others(3): Show | 6 | 132 | 0.0455 | -495 | c.301 others(19): Show |
CUX1 | ENSG00000257923.12 | transcript | ENST00000622516.6 | protein_coding | 4/22 | chr7 | TogoVar | ||||||
CUX1_chr7_101812626_102263233 | 102083713 | ACTATTTA others(488): Show |
A | intron_variant | MODIFIER | HG00544.hp1 HG00639.hp2 HG01099.hp2 others(3): Show |
a0001a0005 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0022a0001c0001t0056a0001c0002t0001others(3): Show | a0001c0001t0022g0099a0001c0001t0056g0113a0001c0002t0001g0100others(3): Show | 6 | 136 | 0.0441 | -495 | c.268 others(19): Show |
CUX1 | ENSG00000257923.12 | transcript | ENST00000292535.12 | protein_coding | 4/23 | chr7 | TogoVar | ||||||
DBNDD1_chr16_89999871_90024456 | 90003450 | TTCCCTCC others(488): Show |
T | downstream_gene_variant | MODIFIER | HG01255.hp2 HG02451.hp1 HG03239.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0007a0001c0001t0001g0011a0001c0001t0001g0088others(3): Show | 6 | 412 | 0.0146 | -495 | c.*23 others(11): Show |
DBNDD1 | ENSG00000003249.15 | transcript | ENST00000002501.11 | protein_coding | 1420 | chr16 | TogoVar | ||||||
DBNDD1_chr16_89999871_90024456 | 90003470 | TACCTTTA others(488): Show |
T | downstream_gene_variant | MODIFIER | HG02257.hp1 HG02895.hp2 HG02897.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012a0001c0001t0001g0049a0001c0001t0001g0054 | 4 | 412 | 0.0097 | -495 | c.*23 others(11): Show |
DBNDD1 | ENSG00000003249.15 | transcript | ENST00000002501.11 | protein_coding | 1400 | chr16 | TogoVar | ||||||
DBNDD1_chr16_89999871_90024456 | 90003525 | TACCTTTA others(488): Show |
T | downstream_gene_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0232 | 1 | 412 | 0.0024 | -495 | c.*23 others(11): Show |
DBNDD1 | ENSG00000003249.15 | transcript | ENST00000002501.11 | protein_coding | 1345 | chr16 | TogoVar | ||||||
DLGAP2_chr8_732628_1713476 | 1643575 | CCCTCCAA others(488): Show |
C | intron_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0011 | a0001c0011t0015 | a0001c0011t0015g0002 | 1 | 40 | 0.0250 | -495 | c.181 others(21): Show |
DLGAP2 | ENSG00000198010.13 | transcript | ENST00000637795.2 | protein_coding | 8/14 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
F11R_chr1_160990211_161026152 | 161009708 | CTATAATC others(488): Show |
C | intron_variant | MODIFIER | HG02071.hp2 NA18612.hp1 |
a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0052a0001c0001t0010g0072 | 2 | 392 | 0.0051 | -495 | c.65- others(15): Show |
F11R | ENSG00000158769.19 | transcript | ENST00000368026.11 | protein_coding | 1/9 | chr1 | TogoVar | ||||||
FLT4_chr5_180596506_180654600 | 180635482 | GTGGGTGG others(488): Show |
G | intron_variant | MODIFIER | NA18947.hp1 | a0002 | a0002c0004 | a0002c0004t0031 | a0002c0004t0031g0279 | 1 | 388 | 0.0026 | -495 | c.59- others(15): Show |
FLT4 | ENSG00000037280.16 | transcript | ENST00000261937.11 | protein_coding | 1/29 | chr5 | TogoVar | ||||||
MAD1L1_chr7_1810795_2237945 | 2035603 | CGGGACAG others(488): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG00558.hp2 HG01074.hp2 others(46): Show |
a0001a0004 | a0001c0001a0001c0003a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(4): Show | a0001c0001t0001g0077a0001c0001t0001g0082a0001c0001t0001g0145others(46): Show | 49 | 264 | 0.1856 | -495 | c.121 others(21): Show |
MAD1L1 | ENSG00000002822.16 | transcript | ENST00000265854.12 | protein_coding | 12/18 | chr7 | TogoVar | ||||||
PDZD2_chr5_31634131_32115932 | 32085198 | TGCCTTGG others(488): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG01891.hp2 HG02647.hp1 others(5): Show |
a0007a0008a0011others(3): Show | a0007c0013a0008c0014a0011c0065others(3): Show | a0007c0013t0001a0007c0013t0004a0008c0014t0001others(5): Show | a0007c0013t0001g0200a0007c0013t0004g0198a0008c0014t0001g0159others(5): Show | 8 | 216 | 0.0370 | -495 | c.368 others(19): Show |
PDZD2 | ENSG00000133401.16 | transcript | ENST00000438447.2 | protein_coding | 19/24 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PLIN4_chr19_4497192_4523486 | 4512587 | GTGGTGTC others(488): Show |
G | disruptive_inframe_deletion | MODERATE | HG00735.hp1 HG01070.hp2 HG01071.hp2 others(33): Show |
a0007a0010a0025others(16): Show | a0007c0010a0007c0057a0007c0059others(21): Show | a0007c0010t0004a0007c0057t0004a0007c0059t0004others(23): Show | a0007c0010t0004g0005a0007c0010t0004g0062a0007c0057t0004g0060others(27): Show | 36 | 412 | 0.0874 | -495 | c.878 others(8): Show |
p.Ser others(13): Show |
PLIN4 | ENSG00000167676.5 | transcript | ENST00000301286.5 | protein_coding | 5/8 | 1491/6502 | 878/4116 | 293/1371 | chr19 | TogoVar | ||
PPP2R3B_chrX_328933_391907 | 366097 | AGAGGCTG others(488): Show |
A | intron_variant | MODIFIER | HG01934.hp1 HG02015.hp1 NA19088.hp1 |
a0002 | a0002c0002a0002c0004 | a0002c0002t0002a0002c0002t0012a0002c0004t0002 | a0002c0002t0002g0014a0002c0002t0012g0008a0002c0004t0002g0005 | 3 | 25 | 0.1200 | -495 | c.325 others(17): Show |
PPP2R3B | ENSG00000167393.18 | transcript | ENST00000390665.9 | protein_coding | 1/12 | chrX | TogoVar | ||||||
PPP2R3B_chrX_328933_391907 | 366162 | TACTGCAC others(488): Show |
T | intron_variant | MODIFIER | HG02630.hp2 | a0004 | a0004c0012 | a0004c0012t0010 | a0004c0012t0010g0024 | 1 | 25 | 0.0400 | -495 | c.325 others(17): Show |
PPP2R3B | ENSG00000167393.18 | transcript | ENST00000390665.9 | protein_coding | 1/12 | chrX | TogoVar | ||||||
PPP2R3B_chrX_328933_391907 | 366300 | GGAGGGTG others(488): Show |
G | intron_variant | MODIFIER | HG03704.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0017 | 1 | 25 | 0.0400 | -495 | c.325 others(17): Show |
PPP2R3B | ENSG00000167393.18 | transcript | ENST00000390665.9 | protein_coding | 1/12 | chrX | TogoVar | ||||||
PPP2R3B_chrX_328933_391907 | 366305 | GTGCAGTG others(488): Show |
G | intron_variant | MODIFIER | HG02630.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0022 | 1 | 25 | 0.0400 | -495 | c.325 others(17): Show |
PPP2R3B | ENSG00000167393.18 | transcript | ENST00000390665.9 | protein_coding | 1/12 | chrX | TogoVar | ||||||
PRKCA_chr17_66297613_66815743 | 66799052 | ATGGTGGT others(488): Show |
A | intron_variant | MODIFIER | HG02698.hp2 NA18950.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0056 | a0001c0001t0005g0001a0001c0001t0056g0062 | 2 | 178 | 0.0112 | -495 | c.185 others(19): Show |
PRKCA | ENSG00000154229.12 | transcript | ENST00000413366.8 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
PRKCA_chr17_66297613_66815743 | 66799088 | GTGGTGGT others(488): Show |
G | intron_variant | MODIFIER | HG02622.hp2 HG03195.hp1 NA18942.hp2 |
a0001 | a0001c0001 | a0001c0001t0016a0001c0001t0024a0001c0001t0093 | a0001c0001t0016g0098a0001c0001t0024g0120a0001c0001t0093g0139 | 3 | 178 | 0.0169 | -495 | c.185 others(19): Show |
PRKCA | ENSG00000154229.12 | transcript | ENST00000413366.8 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000382 | ATGGGGCT others(488): Show |
A | intron_variant | MODIFIER | HG02109.hp1 | a0001 | a0001c0001 | a0001c0001t0034 | a0001c0001t0034g0158 | 1 | 218 | 0.0046 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000440 | GCAGAAGA others(488): Show |
G | intron_variant | MODIFIER | HG01978.hp1 HG02683.hp1 |
a0001 | a0001c0002a0001c0024 | a0001c0002t0090a0001c0024t0051 | a0001c0002t0090g0168a0001c0024t0051g0052 | 2 | 218 | 0.0092 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000484 | GGGCTCGT others(488): Show |
G | intron_variant | MODIFIER | HG02735.hp2 HG02896.hp1 HG03130.hp1 others(2): Show |
a0001 | a0001c0002a0001c0007 | a0001c0002t0013a0001c0002t0044a0001c0002t0054others(2): Show | a0001c0002t0013g0125a0001c0002t0044g0185a0001c0002t0054g0055others(2): Show | 5 | 218 | 0.0229 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000503 | AATCAGCC others(488): Show |
A | intron_variant | MODIFIER | HG02040.hp1 NA18950.hp1 NA18983.hp2 others(3): Show |
a0001 | a0001c0002a0001c0005a0001c0009others(1): Show | a0001c0002t0001a0001c0002t0133a0001c0005t0023others(3): Show | a0001c0002t0001g0046a0001c0002t0133g0109a0001c0005t0023g0111others(3): Show | 6 | 218 | 0.0275 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000638 | ACAGAAGA others(488): Show |
A | intron_variant | MODIFIER | HG00609.hp1 HG02056.hp1 HG02148.hp2 others(6): Show |
a0001a0002 | a0001c0001a0001c0005a0001c0010others(1): Show | a0001c0001t0001a0001c0001t0036a0001c0001t0066others(6): Show | a0001c0001t0001g0134a0001c0001t0036g0164a0001c0001t0066g0038others(6): Show | 9 | 218 | 0.0413 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000767 | ACCAGGCT others(488): Show |
A | intron_variant | MODIFIER | HG01074.hp1 HG01099.hp1 HG03492.hp1 others(2): Show |
a0001a0002 | a0001c0002a0001c0005a0001c0007others(2): Show | a0001c0002t0104a0001c0005t0034a0001c0007t0091others(2): Show | a0001c0002t0104g0080a0001c0005t0034g0198a0001c0007t0091g0115others(2): Show | 5 | 218 | 0.0229 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000800 | AATCAGCC others(488): Show |
A | intron_variant | MODIFIER | HG02622.hp2 HG03209.hp2 |
a0001a0002 | a0001c0023a0002c0012 | a0001c0023t0067a0002c0012t0046 | a0001c0023t0067g0009a0002c0012t0046g0093 | 2 | 218 | 0.0092 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3000998 | TATCAGCC others(488): Show |
T | intron_variant | MODIFIER | HG02015.hp1 HG02074.hp2 HG02698.hp1 others(4): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0021a0001c0001t0022a0001c0002t0116others(3): Show | a0001c0001t0021g0178a0001c0001t0022g0107a0001c0001t0022g0180others(4): Show | 7 | 218 | 0.0321 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RAP1GAP2_chr17_2791438_3042741 | 3001097 | TATCAGCC others(488): Show |
T | intron_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0013 | a0001c0013t0124 | a0001c0013t0124g0075 | 1 | 218 | 0.0046 | -495 | c.120 others(19): Show |
RAP1GAP2 | ENSG00000132359.17 | transcript | ENST00000254695.13 | protein_coding | 14/24 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RNGTT_chr6_88604897_88968618 | 88844701 | ACTATCTA others(488): Show |
A | intron_variant | MODIFIER | HG01175.hp1 HG02145.hp2 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0125a0001c0001t0004g0126 | 2 | 220 | 0.0091 | -495 | c.110 others(17): Show |
RNGTT | ENSG00000111880.16 | transcript | ENST00000369485.9 | protein_coding | 10/15 | chr6 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 220680 | ACAGCTCT others(488): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG01070.hp2 HG01515.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0016a0001c0001t0020a0001c0002t0009others(1): Show | a0001c0001t0016g0093a0001c0001t0020g0127a0001c0002t0009g0126others(1): Show | 4 | 133 | 0.0301 | -495 | c.614 others(16): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 221430 | ATAGACCC others(488): Show |
A | intron_variant | MODIFIER | HG02818.hp2 HG03540.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0010 | a0001c0001t0005g0132a0001c0001t0010g0015 | 2 | 133 | 0.0150 | -495 | c.614 others(17): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | ||||||
SERPINF2_chr17_1737871_1760265 | 1739874 | AGCCGGAC others(488): Show |
A | upstream_gene_variant | MODIFIER | NA18940.hp2 NA18995.hp2 |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0007a0003c0003t0001g0114 | 2 | 445 | 0.0045 | -495 | c.-30 others(11): Show |
SERPINF2 | ENSG00000167711.14 | transcript | ENST00000453066.6 | protein_coding | 2996 | chr17 | TogoVar |