view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RPTOR_chr17_80539838_80971368 | 80862598 | AGCTCCGC others(52): Show |
A | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01261.hp1 others(7): Show |
a0001a0002 | a0001c0021a0001c0031a0001c0044others(6): Show | a0001c0021t0018a0001c0021t0079a0001c0031t0027others(7): Show | a0001c0021t0018g0014 a0001c0021t0079g0005 a0001c0031t0027g0173 others(7): Show |
10 | 196 | 0.0510 | -59 | c.150 others(78): Show |
RPTOR | ENSG00000141564.16 | transcript | ENST00000306801.8 | protein_coding | 13/33 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RTN4IP1_chr6_106565771_106634498 | 106593580 | AGGGATCT others(52): Show |
A | intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0003 | a0001c0003t0007 | a0001c0003t0007g0149 | 1 | 396 | 0.0025 | -59 | c.670 others(76): Show |
RTN4IP1 | ENSG00000130347.13 | transcript | ENST00000369063.8 | protein_coding | 5/8 | chr6 | TogoVar | |||||||
SAMD9_chr7_93094518_93122979 | 93121746 | TCGACAAA others(52): Show |
T | upstream_gene_variant | MODIFIER | NA18978.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0042 | 1 | 392 | 0.0026 | -59 | c.-40 others(70): Show |
SAMD9 | ENSG00000205413.8 | transcript | ENST00000379958.3 | protein_coding | 3768 | chr7 | TogoVar | |||||||
SCGB2A2_chr11_62265158_62278160 | 62277957 | CCCACGGT others(52): Show |
C | downstream_gene_variant | MODIFIER | HG00438.hp2 HG00639.hp2 HG01070.hp1 others(26): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(8): Show |
29 | 390 | 0.0744 | -59 | c.*49 others(70): Show |
SCGB2A2 | ENSG00000110484.7 | transcript | ENST00000227918.3 | protein_coding | 4798 | chr11 | TogoVar | |||||||
SCYL3_chr1_169844631_169898896 | 169850986 | TTTTTTTT others(52): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00642.hp1 others(7): Show |
a0001 | a0001c0003 | a0001c0003t0010 | a0001c0003t0010g0035 a0001c0003t0010g0213 a0001c0003t0010g0215 others(6): Show |
10 | 418 | 0.0239 | -59 | c.*26 others(70): Show |
SCYL3 | ENSG00000000457.14 | transcript | ENST00000367771.11 | protein_coding | 13/13 | 2668 | chr1 | TogoVar | ||||||
SDCCAG8_chr1_243251041_243505091 | 243339045 | AGTGGGGT others(52): Show |
A | intron_variant | MODIFIER | NA19043.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0063 | 1 | 189 | 0.0053 | -59 | c.122 others(78): Show |
SDCCAG8 | ENSG00000054282.16 | transcript | ENST00000366541.8 | protein_coding | 10/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SDK1_chr7_3296252_4274000 | 3976654 | AGGGTCCC others(52): Show |
A | intron_variant | MODIFIER | HG02258.hp1 HG03225.hp2 NA20129.hp1 |
a0001 | a0001c0025a0001c0037a0001c0064 | a0001c0025t0024a0001c0037t0002a0001c0064t0006 | a0001c0025t0024g0088 a0001c0037t0002g0077 a0001c0064t0006g0111 |
3 | 116 | 0.0259 | -59 | c.199 others(78): Show |
SDK1 | ENSG00000146555.20 | transcript | ENST00000404826.7 | protein_coding | 13/44 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SDK1_chr7_3296252_4274000 | 3976981 | TGAGGCTG others(52): Show |
T | intron_variant | MODIFIER | NA19043.hp2 | a0028 | a0028c0052 | a0028c0052t0032 | a0028c0052t0032g0107 | 1 | 116 | 0.0086 | -59 | c.199 others(78): Show |
SDK1 | ENSG00000146555.20 | transcript | ENST00000404826.7 | protein_coding | 13/44 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SDK1_chr7_3296252_4274000 | 3976998 | GGGCCCTC others(52): Show |
G | intron_variant | MODIFIER | HG02145.hp1 HG02922.hp2 |
a0001 | a0001c0002a0001c0017 | a0001c0002t0040a0001c0017t0011 | a0001c0002t0040g0084 a0001c0017t0011g0051 |
2 | 116 | 0.0172 | -59 | c.199 others(78): Show |
SDK1 | ENSG00000146555.20 | transcript | ENST00000404826.7 | protein_coding | 13/44 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SDK1_chr7_3296252_4274000 | 3977180 | GGGGTCCC others(52): Show |
G | intron_variant | MODIFIER | NA19043.hp2 | a0028 | a0028c0052 | a0028c0052t0032 | a0028c0052t0032g0107 | 1 | 116 | 0.0086 | -59 | c.199 others(78): Show |
SDK1 | ENSG00000146555.20 | transcript | ENST00000404826.7 | protein_coding | 13/44 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SERPIND1_chr22_20769113_20792720 | 20789919 | AAAAGTGA others(52): Show |
A | downstream_gene_variant | MODIFIER | NA19083.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0079 | 1 | 412 | 0.0024 | -59 | c.*28 others(70): Show |
SERPIND1 | ENSG00000099937.11 | transcript | ENST00000215727.10 | protein_coding | 2200 | chr22 | TogoVar | |||||||
SFT2D3_chr2_127696497_127710242 | 127705358 | TTAGAAGT others(52): Show |
T | downstream_gene_variant | MODIFIER | HG02027.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 386 | 0.0026 | -59 | c.*31 others(70): Show |
SFT2D3 | ENSG00000173349.6 | transcript | ENST00000310981.6 | protein_coding | 117 | chr2 | TogoVar | |||||||
SHC2_chr19_411589_466033 | 456828 | CTGCCTGG others(52): Show |
C | intron_variant | MODIFIER | HG02451.hp2 HG02486.hp1 NA19043.hp1 others(1): Show |
a0001a0005 | a0001c0001a0001c0007a0005c0009 | a0001c0001t0002a0001c0001t0011a0001c0007t0006others(1): Show | a0001c0001t0002g0039 a0001c0001t0011g0038 a0001c0007t0006g0037 others(1): Show |
4 | 212 | 0.0189 | -59 | c.468 others(76): Show |
SHC2 | ENSG00000129946.11 | transcript | ENST00000264554.11 | protein_coding | 1/12 | chr19 | TogoVar | |||||||
SKIL_chr3_170352715_170401835 | 170401776 | CAAAAAAC others(52): Show |
C | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(286): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0003a0002c0002others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(77): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(278): Show |
289 | 362 | 0.7983 | -59 | c.*93 others(70): Show |
SKIL | ENSG00000136603.15 | transcript | ENST00000259119.9 | protein_coding | 4942 | chr3 | TogoVar | |||||||
SLC10A6_chr4_86818468_86854384 | 86842811 | TTTCTTTC others(52): Show |
T | intron_variant | MODIFIER | HG02976.hp1 HG03579.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0340 a0001c0001t0003g0341 |
2 | 350 | 0.0057 | -59 | c.377 others(76): Show |
SLC10A6 | ENSG00000145283.8 | transcript | ENST00000273905.7 | protein_coding | 1/5 | chr4 | TogoVar | |||||||
SLC22A23_chr6_3263973_3462050 | 3310271 | GGAGCACC others(52): Show |
G | intron_variant | MODIFIER | HG02486.hp1 HG02622.hp1 HG06807.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0015a0001c0001t0029 | a0001c0001t0005g0052 a0001c0001t0015g0051 a0001c0001t0029g0012 |
3 | 222 | 0.0135 | -59 | c.108 others(80): Show |
SLC22A23 | ENSG00000137266.15 | transcript | ENST00000406686.8 | protein_coding | 4/9 | chr6 | TogoVar | |||||||
SLC22A23_chr6_3263973_3462050 | 3310321 | CCTCCCAC others(52): Show |
C | intron_variant | MODIFIER | HG00544.hp2 HG01106.hp2 HG01109.hp2 others(55): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(25): Show | a0001c0001t0001g0024 a0001c0001t0001g0038 a0001c0001t0001g0056 others(55): Show |
58 | 222 | 0.2613 | -59 | c.108 others(80): Show |
SLC22A23 | ENSG00000137266.15 | transcript | ENST00000406686.8 | protein_coding | 4/9 | chr6 | TogoVar | |||||||
SLC25A21_chr14_36672921_37177606 | 37098746 | TAGACAGA others(52): Show |
T | intron_variant | MODIFIER | NA18971.hp1 NA19081.hp2 NA20905.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0052 a0001c0001t0003g0109 a0001c0001t0003g0112 |
3 | 164 | 0.0183 | -59 | c.70+ others(76): Show |
SLC25A21 | ENSG00000183032.12 | transcript | ENST00000331299.6 | protein_coding | 1/9 | chr14 | TogoVar | |||||||
SLC26A2_chr5_149955758_149992400 | 149989343 | TTTCTAGC others(52): Show |
T | downstream_gene_variant | MODIFIER | HG03139.hp2 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0066 | 1 | 364 | 0.0028 | -59 | c.*75 others(70): Show |
SLC26A2 | ENSG00000155850.9 | transcript | ENST00000286298.5 | protein_coding | 1944 | chr5 | TogoVar | |||||||
SLC28A1_chr15_84879662_84950798 | 84928569 | TCTTTCTT others(52): Show |
T | intron_variant | MODIFIER | HG01255.hp2 HG02280.hp1 HG02559.hp2 others(7): Show |
a0001a0003a0010 | a0001c0004a0003c0015a0010c0018others(1): Show | a0001c0004t0001a0001c0004t0003a0001c0004t0012others(4): Show | a0001c0004t0001g0369 a0001c0004t0001g0380 a0001c0004t0003g0012 others(7): Show |
10 | 396 | 0.0253 | -59 | c.108 others(78): Show |
SLC28A1 | ENSG00000156222.12 | transcript | ENST00000394573.6 | protein_coding | 12/18 | chr15 | TogoVar | |||||||
SLC49A3_chr4_676829_694151 | 681626 | CCCCCTCC others(52): Show |
C | downstream_gene_variant | MODIFIER | HG03710.hp2 | a0001 | a0001c0007 | a0001c0007t0001 | a0001c0007t0001g0016 | 1 | 412 | 0.0024 | -59 | c.*27 others(68): Show |
SLC49A3 | ENSG00000169026.13 | transcript | ENST00000322224.9 | protein_coding | 202 | chr4 | TogoVar | |||||||
SLC6A12_chr12_185081_219157 | 216900 | TACTTCAT others(52): Show |
T | upstream_gene_variant | MODIFIER | HG01258.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0015 | 1 | 420 | 0.0024 | -59 | c.-31 others(70): Show |
SLC6A12 | ENSG00000111181.13 | transcript | ENST00000684302.1 | protein_coding | 2744 | chr12 | TogoVar | |||||||
SLC7A1_chr13_29504414_29600688 | 29558512 | AGGGGGAG others(52): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(95): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(18): Show | a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0012 others(90): Show |
98 | 330 | 0.2970 | -59 | c.-11 others(78): Show |
SLC7A1 | ENSG00000139514.13 | transcript | ENST00000380752.10 | protein_coding | 1/12 | chr13 | TogoVar | |||||||
SLC7A1_chr13_29504414_29600688 | 29558520 | AGAATGTG others(52): Show |
A | intron_variant | MODIFIER | HG00738.hp2 HG01952.hp1 HG02148.hp1 |
a0001 | a0001c0002 | a0001c0002t0004a0001c0002t0009 | a0001c0002t0004g0290 a0001c0002t0009g0197 a0001c0002t0009g0306 |
3 | 330 | 0.0091 | -59 | c.-11 others(78): Show |
SLC7A1 | ENSG00000139514.13 | transcript | ENST00000380752.10 | protein_coding | 1/12 | chr13 | TogoVar | |||||||
SLC7A1_chr13_29504414_29600688 | 29559151 | GGGGGAGT others(52): Show |
G | intron_variant | MODIFIER | HG02970.hp1 | a0001 | a0001c0001 | a0001c0001t0045 | a0001c0001t0045g0082 | 1 | 330 | 0.0030 | -59 | c.-11 others(78): Show |
SLC7A1 | ENSG00000139514.13 | transcript | ENST00000380752.10 | protein_coding | 1/12 | chr13 | TogoVar | |||||||
SLC7A1_chr13_29504414_29600688 | 29559292 | GGGGGAGA others(52): Show |
G | intron_variant | MODIFIER | HG01993.hp2 NA18965.hp1 NA18967.hp2 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0004a0001c0002t0007 | a0001c0002t0002g0151 a0001c0002t0002g0186 a0001c0002t0004g0181 others(1): Show |
4 | 330 | 0.0121 | -59 | c.-11 others(78): Show |
SLC7A1 | ENSG00000139514.13 | transcript | ENST00000380752.10 | protein_coding | 1/12 | chr13 | TogoVar | |||||||
SLC9A6_chrX_135980435_136052269 | 136033603 | ACCTTTCA others(52): Show |
A | intron_variant | MODIFIER | HG01361.hp2 HG01978.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0140 a0001c0001t0001g0145 |
2 | 199 | 0.0101 | -59 | c.166 others(76): Show |
SLC9A6 | ENSG00000198689.13 | transcript | ENST00000630721.3 | protein_coding | 16/17 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SMC6_chr2_17658812_17758810 | 17758745 | TTGGGAGG others(52): Show |
T | upstream_gene_variant | MODIFIER | NA18979.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0075 | 1 | 254 | 0.0039 | -59 | c.-52 others(70): Show |
SMC6 | ENSG00000163029.16 | transcript | ENST00000448223.7 | protein_coding | 4936 | chr2 | TogoVar | |||||||
SMIM35_chr11_117998634_118091963 | 118049696 | GTCATATA others(52): Show |
G | intron_variant | MODIFIER | NA18997.hp2 | a0002 | a0002c0002 | a0002c0002t0005 | a0002c0002t0005g0395 | 1 | 408 | 0.0025 | -59 | c.8-3 others(74): Show |
SMIM35 | ENSG00000255274.10 | transcript | ENST00000689828.1 | protein_coding | 1/4 | chr11 | TogoVar | |||||||
SMOC2_chr6_168436184_168672992 | 168596006 | CTTCCTGG others(52): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00423.hp1 others(61): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(9): Show | a0001c0001t0001g0085 a0001c0001t0001g0095 a0001c0001t0001g0098 others(61): Show |
64 | 180 | 0.3556 | -59 | c.638 others(76): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SMOC2_chr6_168436184_168672992 | 168596221 | CGTGAACA others(52): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00423.hp1 others(53): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(9): Show | a0001c0001t0001g0085 a0001c0001t0001g0095 a0001c0001t0001g0098 others(53): Show |
56 | 180 | 0.3111 | -59 | c.638 others(76): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SMPDL3A_chr6_122784258_122814720 | 122808592 | TTCCTCCC others(52): Show |
T | intron_variant | MODIFIER | NA19074.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0171 | 1 | 442 | 0.0023 | -59 | c.104 others(76): Show |
SMPDL3A | ENSG00000172594.13 | transcript | ENST00000368440.5 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SNX14_chr6_85500496_85598858 | 85574794 | TAGTCTCT others(52): Show |
T | intron_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0253 | 1 | 360 | 0.0028 | -59 | c.141 others(74): Show |
SNX14 | ENSG00000135317.14 | transcript | ENST00000314673.8 | protein_coding | 1/28 | chr6 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12244844 | CATTTCTC others(52): Show |
C | intron_variant | MODIFIER | NA19060.hp1 | a0001 | a0001c0001 | a0001c0001t0110 | a0001c0001t0110g0162 | 1 | 176 | 0.0057 | -59 | c.167 others(80): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 14/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SOX11_chr2_5687384_5706385 | 5706326 | TGGGGTGG others(52): Show |
T | downstream_gene_variant | MODIFIER | NA18963.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0000 | 1 | 434 | 0.0023 | -59 | c.*12 others(72): Show |
SOX11 | ENSG00000176887.7 | transcript | ENST00000322002.5 | protein_coding | 4942 | chr2 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16132294 | GGAAGGAA others(52): Show |
G | intron_variant | MODIFIER | NA18945.hp1 NA18974.hp1 NA19002.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005 | a0001c0001t0001g0167 a0001c0001t0002g0087 a0001c0001t0002g0148 others(1): Show |
4 | 218 | 0.0184 | -59 | c.778 others(78): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | |||||||
SPADH_chr10_122667850_122684494 | 122680920 | CCTCATGT others(52): Show |
C | downstream_gene_variant | MODIFIER | NA19006.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0005 | 1 | 414 | 0.0024 | -59 | c.*18 others(70): Show |
SPADH | ENSG00000286135.1 | transcript | ENST00000652090.1 | protein_coding | 1427 | chr10 | TogoVar | |||||||
SPADH_chr10_122667850_122684494 | 122681289 | CGGAGATA others(52): Show |
C | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00639.hp1 others(89): Show |
a0001a0005 | a0001c0001a0001c0004a0001c0006others(2): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0005others(5): Show | a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0021 others(14): Show |
92 | 414 | 0.2222 | -59 | c.*22 others(70): Show |
SPADH | ENSG00000286135.1 | transcript | ENST00000652090.1 | protein_coding | 1796 | chr10 | TogoVar | |||||||
SPADH_chr10_122667850_122684494 | 122681339 | CGTGTGAA others(52): Show |
C | downstream_gene_variant | MODIFIER | HG02738.hp2 HG03471.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0022 a0001c0001t0002g0049 |
2 | 414 | 0.0048 | -59 | c.*22 others(70): Show |
SPADH | ENSG00000286135.1 | transcript | ENST00000652090.1 | protein_coding | 1846 | chr10 | TogoVar | |||||||
SPADH_chr10_122667850_122684494 | 122681806 | CCTCGTGT others(52): Show |
C | downstream_gene_variant | MODIFIER | NA18940.hp2 NA18951.hp1 NA19006.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0005 a0001c0001t0004g0033 |
4 | 414 | 0.0097 | -59 | c.*27 others(70): Show |
SPADH | ENSG00000286135.1 | transcript | ENST00000652090.1 | protein_coding | 2313 | chr10 | TogoVar | |||||||
SPEF2_chr5_35612863_35819611 | 35672233 | GTTCATTA others(52): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(260): Show |
a0001a0002a0003others(39): Show | a0001c0002a0001c0003a0002c0001others(49): Show | a0001c0002t0001a0001c0003t0001a0002c0001t0001others(49): Show | a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0002t0001g0020 others(256): Show |
263 | 268 | 0.9813 | -59 | c.152 others(78): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 10/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPO11_chr20_57324803_57348993 | 57347116 | TCGCAGAG others(52): Show |
T | downstream_gene_variant | MODIFIER | HG01943.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 1 | 322 | 0.0031 | -59 | c.*36 others(70): Show |
SPO11 | ENSG00000054796.13 | transcript | ENST00000371263.8 | protein_coding | 3124 | chr20 | TogoVar | |||||||
SPPL3_chr12_120757510_120909358 | 120852735 | ATATAATA others(52): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00423.hp1 others(90): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0014others(5): Show | a0001c0001t0001g0001 a0001c0001t0001g0221 a0001c0001t0001g0222 others(89): Show |
93 | 320 | 0.2906 | -59 | c.24- others(76): Show |
SPPL3 | ENSG00000157837.16 | transcript | ENST00000353487.7 | protein_coding | 1/10 | chr12 | TogoVar | |||||||
SRPK2_chr7_105111374_105393921 | 105342082 | AGTGAAAC others(52): Show |
A | intron_variant | MODIFIER | HG03017.hp2 HG03491.hp2 NA18955.hp1 others(7): Show |
a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0034 a0001c0002t0003g0035 a0001c0002t0003g0036 others(7): Show |
10 | 282 | 0.0355 | -59 | c.71+ others(76): Show |
SRPK2 | ENSG00000135250.17 | transcript | ENST00000393651.8 | protein_coding | 2/15 | chr7 | TogoVar | |||||||
STAB2_chr12_103582273_103771719 | 103653848 | ATGGATGG others(52): Show |
A | intron_variant | MODIFIER | NA21309.hp1 | a0002 | a0002c0035 | a0002c0035t0001 | a0002c0035t0001g0015 | 1 | 256 | 0.0039 | -59 | c.140 others(76): Show |
STAB2 | ENSG00000136011.15 | transcript | ENST00000388887.7 | protein_coding | 12/68 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
STON1_chr2_48525154_48603513 | 48564493 | TTCTTCTT others(52): Show |
T | intron_variant | MODIFIER | HG02486.hp2 | a0003 | a0003c0004 | a0003c0004t0004 | a0003c0004t0004g0313 | 1 | 376 | 0.0027 | -59 | c.-47 others(78): Show |
STON1 | ENSG00000243244.7 | transcript | ENST00000404752.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
STON1_chr2_48525154_48603513 | 48564499 | TTCTTCTT others(52): Show |
T | intron_variant | MODIFIER | HG02895.hp2 | a0003 | a0003c0004 | a0003c0004t0004 | a0003c0004t0004g0330 | 1 | 376 | 0.0027 | -59 | c.-47 others(78): Show |
STON1 | ENSG00000243244.7 | transcript | ENST00000404752.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
STX2_chr12_130784600_130844250 | 130842251 | TGTGATAT others(52): Show |
T | upstream_gene_variant | MODIFIER | HG01175.hp1 | a0002 | a0002c0002 | a0002c0002t0018 | a0002c0002t0018g0073 | 1 | 380 | 0.0026 | -59 | c.-32 others(70): Show |
STX2 | ENSG00000111450.15 | transcript | ENST00000392373.7 | protein_coding | 3002 | chr12 | TogoVar | |||||||
SUPT20HL2_chrX_24303210_24319069 | 24309687 | AAAATTAA others(52): Show |
A | 3_prime_UTR_variant | MODIFIER | HG00140.hp1 | a0001 | a0001c0001 | a0001c0001t0049 | a0001c0001t0049g0000 | 1 | 293 | 0.0034 | -59 | c.*11 others(70): Show |
SUPT20HL2 | ENSG00000223611.7 | transcript | ENST00000486479.3 | protein_coding | 1/1 | 1116 | chrX | TogoVar | ||||||
SYNJ2_chr6_157976863_158104176 | 158088005 | ATTTTAAC others(52): Show |
A | intron_variant | MODIFIER | HG04115.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0238 | 1 | 312 | 0.0032 | -59 | c.334 others(76): Show |
SYNJ2 | ENSG00000078269.15 | transcript | ENST00000355585.9 | protein_coding | 23/26 | INFO_REALIGN_3_PRIME | chr6 | TogoVar |