view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RTL4_chrX_112078016_112462514 | 112402400 | TTGTGTG | T | intron_variant | MODIFIER | HG01168.hp2 HG01952.hp1 HG02040.hp1 others(12): Show |
a0001a0002 | a0001c0002a0002c0001 | a0001c0002t0002a0002c0001t0001 | a0001c0002t0002g0001 a0001c0002t0002g0002 a0001c0002t0002g0025 others(12): Show |
15 | 134 | 0.1119 | -6 | c.-28 others(27): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112437802 | ATGGTGG | A | intron_variant | MODIFIER | HG01884.hp2 HG02257.hp2 HG02451.hp1 others(5): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0004 | a0001c0002t0002g0002 a0001c0002t0002g0027 a0001c0002t0002g0032 others(5): Show |
8 | 134 | 0.0597 | -6 | c.-23 others(25): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112456842 | TTGTGCA | T | 3_prime_UTR_variant | MODIFIER | HG01069.hp1 | a0001 | a0001c0002 | a0001c0002t0011 | a0001c0002t0011g0099 | 1 | 134 | 0.0075 | -6 | c.*11 others(17): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 5/5 | 1182 | chrX | TogoVar | ||||||
RTL4_chrX_112078016_112462514 | 112456861 | AGTCGGG | A | 3_prime_UTR_variant | MODIFIER | HG01069.hp1 | a0001 | a0001c0002 | a0001c0002t0011 | a0001c0002t0011g0099 | 1 | 134 | 0.0075 | -6 | c.*12 others(17): Show |
RTL4 | ENSG00000187823.4 | transcript | ENST00000695839.1 | protein_coding | 5/5 | 1201 | chrX | TogoVar | ||||||
RTL6_chr22_44487583_44503233 | 44491355 | GAAAAAA | G | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00423.hp1 others(120): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(14): Show | a0001c0001t0001g0001 a0001c0001t0002g0002 a0001c0001t0004g0004 others(14): Show |
123 | 402 | 0.3060 | -6 | c.*54 others(17): Show |
RTL6 | ENSG00000188636.4 | transcript | ENST00000341255.4 | protein_coding | 1227 | chr22 | TogoVar | |||||||
RTL8A_chrX_135045932_135057135 | 135055284 | AATATAT | A | upstream_gene_variant | MODIFIER | HG01123.hp1 HG01167.hp1 HG01243.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 21 | 318 | 0.0660 | -6 | c.-31 others(17): Show |
RTL8A | ENSG00000203950.7 | transcript | ENST00000370775.3 | protein_coding | 3150 | chrX | TogoVar | |||||||
RTL8C_chrX_135027355_135038546 | 135030654 | ACCTCTG | A | upstream_gene_variant | MODIFIER | NA18965.hp1 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0000 | 1 | 298 | 0.0034 | -6 | c.-17 others(17): Show |
RTL8C | ENSG00000134590.14 | transcript | ENST00000257013.9 | protein_coding | 1700 | chrX | TogoVar | |||||||
RTL9_chrX_110353848_110461334 | 110367973 | AATTATT | A | intron_variant | MODIFIER | HG01243.hp1 HG02056.hp1 HG02622.hp2 others(7): Show |
a0001a0002a0010 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0002t0002a0001c0004t0002others(2): Show | a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 others(7): Show |
10 | 165 | 0.0606 | -6 | c.-16 others(25): Show |
RTL9 | ENSG00000243978.9 | transcript | ENST00000520821.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL9_chrX_110353848_110461334 | 110423336 | AAAAAAG | A | intron_variant | MODIFIER | NA19091.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0048 | 1 | 165 | 0.0061 | -6 | c.-16 others(27): Show |
RTL9 | ENSG00000243978.9 | transcript | ENST00000520821.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL9_chrX_110353848_110461334 | 110423374 | AAGAAGG | A | intron_variant | MODIFIER | HG01106.hp1 NA19043.hp1 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0148 a0001c0002t0002g0149 |
2 | 165 | 0.0121 | -6 | c.-16 others(27): Show |
RTL9 | ENSG00000243978.9 | transcript | ENST00000520821.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTL9_chrX_110353848_110461334 | 110442247 | CTGTGTG | C | intron_variant | MODIFIER | HG01884.hp1 NA19000.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0009 | a0001c0001t0001g0022 a0001c0002t0009g0008 |
2 | 165 | 0.0121 | -6 | c.-16 others(25): Show |
RTL9 | ENSG00000243978.9 | transcript | ENST00000520821.6 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RTN1_chr14_59590983_59875776 | 59707708 | TACACAC | T | intron_variant | MODIFIER | HG02055.hp1 HG02145.hp2 HG02280.hp2 others(2): Show |
a0003a0005a0007 | a0003c0004a0005c0006a0007c0009 | a0003c0004t0001a0005c0006t0001a0007c0009t0001 | a0003c0004t0001g0040 a0003c0004t0001g0080 a0003c0004t0001g0081 others(2): Show |
5 | 172 | 0.0291 | -6 | c.176 others(27): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 3/8 | chr14 | TogoVar | |||||||
RTN1_chr14_59590983_59875776 | 59749150 | CTATCTA | C | intron_variant | MODIFIER | HG00741.hp2 HG01099.hp1 HG01981.hp2 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0022 others(4): Show |
7 | 172 | 0.0407 | -6 | c.242 others(23): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 1/8 | chr14 | TogoVar | |||||||
RTN1_chr14_59590983_59875776 | 59749222 | ATATATC | A | intron_variant | MODIFIER | HG01081.hp2 HG01346.hp1 HG03130.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008 a0001c0001t0001g0064 a0001c0001t0001g0077 others(5): Show |
8 | 172 | 0.0465 | -6 | c.242 others(23): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 1/8 | chr14 | TogoVar | |||||||
RTN1_chr14_59590983_59875776 | 59749250 | ATATATC | A | intron_variant | MODIFIER | HG01515.hp2 HG02896.hp1 HG03130.hp2 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0077 a0001c0001t0001g0114 a0001c0001t0001g0117 others(2): Show |
5 | 172 | 0.0291 | -6 | c.242 others(23): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 1/8 | chr14 | TogoVar | |||||||
RTN1_chr14_59590983_59875776 | 59749322 | ATATATC | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(53): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0003t0001 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 others(53): Show |
56 | 172 | 0.3256 | -6 | c.242 others(23): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 1/8 | chr14 | TogoVar | |||||||
RTN1_chr14_59590983_59875776 | 59777819 | CAACAAA | C | intron_variant | MODIFIER | NA18964.hp1 NA18977.hp1 NA18983.hp1 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 others(11): Show |
14 | 172 | 0.0814 | -6 | c.242 others(25): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 1/8 | chr14 | TogoVar | |||||||
RTN1_chr14_59590983_59875776 | 59792359 | TCACACA | T | intron_variant | MODIFIER | HG02922.hp2 HG02976.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0041 a0001c0001t0001g0042 |
2 | 172 | 0.0116 | -6 | c.242 others(25): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 1/8 | chr14 | TogoVar | |||||||
RTN1_chr14_59590983_59875776 | 59819403 | ACACCAC | A | intron_variant | MODIFIER | HG01496.hp1 NA19043.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0004 | a0001c0001t0001g0054 a0002c0002t0004g0029 |
2 | 172 | 0.0116 | -6 | c.241 others(25): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 1/8 | chr14 | TogoVar | |||||||
RTN1_chr14_59590983_59875776 | 59820356 | GTTTTTT | G | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG01243.hp1 others(32): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(2): Show | a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0044 others(32): Show |
35 | 172 | 0.2035 | -6 | c.241 others(25): Show |
RTN1 | ENSG00000139970.18 | transcript | ENST00000267484.10 | protein_coding | 1/8 | chr14 | TogoVar | |||||||
RTN2_chr19_45480294_45502047 | 45489676 | CTTTTTT | C | intron_variant | MODIFIER | HG00544.hp2 HG00609.hp2 HG00621.hp2 others(24): Show |
a0001a0003a0007 | a0001c0001a0001c0011a0003c0013others(1): Show | a0001c0001t0002a0001c0011t0002a0003c0013t0002others(1): Show | a0001c0001t0002g0010 a0001c0001t0002g0028 a0001c0001t0002g0050 others(14): Show |
27 | 432 | 0.0625 | -6 | c.103 others(23): Show |
RTN2 | ENSG00000125744.12 | transcript | ENST00000245923.9 | protein_coding | 5/10 | chr19 | TogoVar | |||||||
RTN2_chr19_45480294_45502047 | 45497698 | GTATATA | G | upstream_gene_variant | MODIFIER | HG00408.hp1 HG01978.hp2 HG01981.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0001 | a0001c0001t0002g0004 a0001c0001t0002g0011 a0001c0001t0002g0018 others(9): Show |
13 | 432 | 0.0301 | -6 | c.-87 others(15): Show |
RTN2 | ENSG00000125744.12 | transcript | ENST00000245923.9 | protein_coding | 652 | chr19 | TogoVar | |||||||
RTN3_chr11_63676500_63764882 | 63684129 | GTTTTTT | G | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(82): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(7): Show | a0001c0001t0001g0006 a0001c0001t0001g0022 a0001c0001t0001g0025 others(82): Show |
85 | 170 | 0.5000 | -6 | c.142 others(23): Show |
RTN3 | ENSG00000133318.14 | transcript | ENST00000377819.10 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
RTN3_chr11_63676500_63764882 | 63734734 | AACACAC | A | intron_variant | MODIFIER | HG02683.hp2 HG03471.hp1 HG04184.hp2 others(1): Show |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0001a0003c0003t0005a0003c0003t0015 | a0002c0002t0001g0146 a0003c0003t0005g0096 a0003c0003t0005g0135 others(1): Show |
4 | 170 | 0.0235 | -6 | c.253 others(27): Show |
RTN3 | ENSG00000133318.14 | transcript | ENST00000377819.10 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
RTN3_chr11_63676500_63764882 | 63735550 | TTCTCTC | T | intron_variant | MODIFIER | HG01109.hp2 HG02735.hp2 HG02965.hp2 others(1): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0033 a0002c0002t0001g0138 a0002c0002t0001g0149 others(1): Show |
4 | 170 | 0.0235 | -6 | c.253 others(27): Show |
RTN3 | ENSG00000133318.14 | transcript | ENST00000377819.10 | protein_coding | 3/8 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
RTN4IP1_chr6_106565771_106634498 | 106605814 | CCCAAAA | C | intron_variant | MODIFIER | HG00733.hp1 HG01243.hp1 HG01952.hp2 others(6): Show |
a0001 | a0001c0002a0001c0004 | a0001c0002t0010a0001c0004t0003 | a0001c0002t0010g0358 a0001c0002t0010g0359 a0001c0002t0010g0360 others(5): Show |
9 | 396 | 0.0227 | -6 | c.621 others(23): Show |
RTN4IP1 | ENSG00000130347.13 | transcript | ENST00000369063.8 | protein_coding | 4/8 | chr6 | TogoVar | |||||||
RTN4IP1_chr6_106565771_106634498 | 106624946 | AAAAAAG | A | intron_variant | MODIFIER | HG00423.hp2 HG00544.hp2 HG00609.hp2 others(65): Show |
a0001 | a0001c0003a0001c0004a0001c0008others(1): Show | a0001c0003t0004a0001c0003t0016a0001c0004t0003others(2): Show | a0001c0003t0004g0012 a0001c0003t0004g0143 a0001c0003t0004g0154 others(56): Show |
68 | 396 | 0.1717 | -6 | c.275 others(23): Show |
RTN4IP1 | ENSG00000130347.13 | transcript | ENST00000369063.8 | protein_coding | 1/8 | chr6 | TogoVar | |||||||
RTN4RL1_chr17_1929677_2030334 | 1935711 | GTATATA | G | 3_prime_UTR_variant | MODIFIER | HG00280.hp1 HG00735.hp2 HG01123.hp1 others(15): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0009a0001c0001t0104a0001c0001t0105others(5): Show | a0001c0001t0009g0119 a0001c0001t0009g0121 a0001c0001t0009g0168 others(15): Show |
18 | 384 | 0.0469 | -6 | c.*77 others(15): Show |
RTN4RL1 | ENSG00000185924.7 | transcript | ENST00000331238.7 | protein_coding | 2/2 | 779 | chr17 | TogoVar | ||||||
RTN4RL1_chr17_1929677_2030334 | 1950846 | CAAAAAA | C | intron_variant | MODIFIER | HG02559.hp2 HG02572.hp1 HG02615.hp1 others(12): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0011 | a0001c0001t0011a0001c0001t0017a0001c0001t0093others(8): Show | a0001c0001t0011g0109 a0001c0001t0017g0018 a0001c0001t0017g0085 others(12): Show |
15 | 384 | 0.0391 | -6 | c.14- others(23): Show |
RTN4RL1 | ENSG00000185924.7 | transcript | ENST00000331238.7 | protein_coding | 1/1 | chr17 | TogoVar | |||||||
RTN4RL1_chr17_1929677_2030334 | 1957102 | TTAAAAC | T | intron_variant | MODIFIER | HG02145.hp1 HG02559.hp1 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0084a0001c0001t0086a0001c0001t0110 | a0001c0001t0084g0111 a0001c0001t0086g0043 a0001c0001t0110g0250 |
3 | 384 | 0.0078 | -6 | c.14- others(23): Show |
RTN4RL1 | ENSG00000185924.7 | transcript | ENST00000331238.7 | protein_coding | 1/1 | chr17 | TogoVar | |||||||
RTN4RL1_chr17_1929677_2030334 | 1987718 | GACACAC | G | intron_variant | MODIFIER | HG00323.hp1 HG00438.hp1 HG00438.hp2 others(50): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(33): Show | a0001c0001t0001g0174 a0001c0001t0001g0206 a0001c0001t0001g0266 others(50): Show |
53 | 384 | 0.1380 | -6 | c.13+ others(23): Show |
RTN4RL1 | ENSG00000185924.7 | transcript | ENST00000331238.7 | protein_coding | 1/1 | chr17 | TogoVar | |||||||
RTN4RL1_chr17_1929677_2030334 | 1988517 | AAAAAAG | A | intron_variant | MODIFIER | HG00642.hp2 HG00735.hp1 HG01069.hp2 others(58): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0003c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0113 a0001c0001t0001g0124 a0001c0001t0001g0273 others(57): Show |
61 | 384 | 0.1589 | -6 | c.13+ others(23): Show |
RTN4RL1 | ENSG00000185924.7 | transcript | ENST00000331238.7 | protein_coding | 1/1 | chr17 | TogoVar | |||||||
RTN4RL1_chr17_1929677_2030334 | 2007337 | AACACAC | A | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp1 HG00423.hp2 others(37): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 others(37): Show |
40 | 384 | 0.1042 | -6 | c.13+ others(23): Show |
RTN4RL1 | ENSG00000185924.7 | transcript | ENST00000331238.7 | protein_coding | 1/1 | chr17 | TogoVar | |||||||
RTN4RL1_chr17_1929677_2030334 | 2017701 | ACACACG | A | intron_variant | MODIFIER | HG00733.hp2 HG00741.hp2 HG04115.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0006a0001c0001t0014a0001c0002t0034others(1): Show | a0001c0001t0006g0240 a0001c0001t0014g0238 a0001c0002t0034g0237 others(1): Show |
4 | 384 | 0.0104 | -6 | c.13+ others(21): Show |
RTN4RL1 | ENSG00000185924.7 | transcript | ENST00000331238.7 | protein_coding | 1/1 | chr17 | TogoVar | |||||||
RTN4R_chr22_20236415_20273318 | 20251971 | TATCACC | T | intron_variant | MODIFIER | HG01891.hp1 HG03486.hp2 NA18522.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0124 a0001c0001t0001g0129 a0001c0001t0004g0068 |
3 | 392 | 0.0077 | -6 | c.23- others(21): Show |
RTN4R | ENSG00000040608.14 | transcript | ENST00000043402.8 | protein_coding | 1/1 | chr22 | TogoVar | |||||||
RTN4R_chr22_20236415_20273318 | 20271187 | CAAAATG | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(266): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(10): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(169): Show |
269 | 392 | 0.6862 | -6 | c.-31 others(17): Show |
RTN4R | ENSG00000040608.14 | transcript | ENST00000043402.8 | protein_coding | 2870 | chr22 | TogoVar | |||||||
RTP1_chr3_187192486_187206462 | 187193821 | ACACACT | A | upstream_gene_variant | MODIFIER | HG01081.hp1 HG01167.hp1 HG01169.hp1 others(10): Show |
a0003 | a0003c0003 | a0003c0003t0005 | a0003c0003t0005g0002 | 13 | 446 | 0.0292 | -6 | c.-36 others(17): Show |
RTP1 | ENSG00000175077.6 | transcript | ENST00000312295.5 | protein_coding | 3664 | chr3 | TogoVar | |||||||
RTP1_chr3_187192486_187206462 | 187204284 | CTTTTTT | C | downstream_gene_variant | MODIFIER | HG00735.hp1 HG01109.hp1 HG02145.hp2 others(5): Show |
a0002 | a0002c0002 | a0002c0002t0004a0002c0002t0013a0002c0002t0026 | a0002c0002t0004g0001 a0002c0002t0013g0001 a0002c0002t0026g0001 |
8 | 446 | 0.0179 | -6 | c.*42 others(17): Show |
RTP1 | ENSG00000175077.6 | transcript | ENST00000312295.5 | protein_coding | 2823 | chr3 | TogoVar | |||||||
RTP2_chr3_187693259_187707557 | 187699778 | CACACAT | C | intron_variant | MODIFIER | HG00438.hp2 HG00642.hp1 HG00642.hp2 others(21): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(2): Show | a0001c0001t0001g0007 a0001c0001t0001g0019 a0001c0001t0001g0067 others(5): Show |
24 | 422 | 0.0569 | -6 | c.165 others(21): Show |
RTP2 | ENSG00000198471.1 | transcript | ENST00000358241.1 | protein_coding | 1/1 | chr3 | TogoVar | |||||||
RTP2_chr3_187693259_187707557 | 187699780 | CACATAT | C | intron_variant | MODIFIER | HG00140.hp2 HG01169.hp1 HG01175.hp1 others(10): Show |
a0003a0004a0007 | a0003c0003a0004c0007a0007c0016 | a0003c0003t0002a0004c0007t0002a0007c0016t0001 | a0003c0003t0002g0008 a0004c0007t0002g0087 a0007c0016t0001g0088 |
13 | 422 | 0.0308 | -6 | c.165 others(21): Show |
RTP2 | ENSG00000198471.1 | transcript | ENST00000358241.1 | protein_coding | 1/1 | chr3 | TogoVar | |||||||
RTP3_chr3_46492976_46505950 | 46493833 | GCTCTCC | G | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00438.hp1 others(98): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0005 others(5): Show |
101 | 426 | 0.2371 | -6 | c.-42 others(17): Show |
RTP3 | ENSG00000163825.5 | transcript | ENST00000296142.4 | protein_coding | 4142 | chr3 | TogoVar | |||||||
RTRAF_chr14_51984546_52015694 | 52008918 | TATATTC | T | 3_prime_UTR_variant | MODIFIER | NA18975.hp2 NA19010.hp1 NA19091.hp1 |
a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0010 | 3 | 436 | 0.0069 | -6 | c.*44 others(17): Show |
RTRAF | ENSG00000087302.9 | transcript | ENST00000261700.8 | protein_coding | 8/8 | 4406 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
RTTN_chr18_69998031_70210687 | 70042366 | CTTTTTT | C | intron_variant | MODIFIER | HG02145.hp1 HG02257.hp1 HG02258.hp1 others(2): Show |
a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0145 a0006c0007t0001g0146 a0006c0007t0001g0148 others(2): Show |
5 | 156 | 0.0321 | -6 | c.554 others(25): Show |
RTTN | ENSG00000176225.15 | transcript | ENST00000640769.2 | protein_coding | 40/48 | chr18 | TogoVar | |||||||
RTTN_chr18_69998031_70210687 | 70080928 | TCACACA | T | intron_variant | MODIFIER | HG01346.hp2 HG01891.hp2 HG01978.hp2 others(12): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0003c0004others(5): Show | a0001c0001t0005a0002c0002t0002a0003c0004t0003others(8): Show | a0001c0001t0005g0044 a0002c0002t0002g0035 a0003c0004t0003g0002 others(12): Show |
15 | 156 | 0.0962 | -6 | c.437 others(25): Show |
RTTN | ENSG00000176225.15 | transcript | ENST00000640769.2 | protein_coding | 32/48 | chr18 | TogoVar | |||||||
RTTN_chr18_69998031_70210687 | 70132472 | AAATATT | A | intron_variant | MODIFIER | HG01106.hp1 HG01109.hp2 HG01168.hp2 others(25): Show |
a0001a0002a0004others(4): Show | a0001c0001a0002c0002a0004c0005others(4): Show | a0001c0001t0001a0002c0002t0004a0004c0005t0001others(11): Show | a0001c0001t0001g0100 a0002c0002t0004g0108 a0002c0002t0004g0121 others(24): Show |
28 | 156 | 0.1795 | -6 | c.295 others(25): Show |
RTTN | ENSG00000176225.15 | transcript | ENST00000640769.2 | protein_coding | 23/48 | chr18 | TogoVar | |||||||
RTTN_chr18_69998031_70210687 | 70136425 | ATAAATT | A | intron_variant | MODIFIER | HG00099.hp1 HG00621.hp1 HG00621.hp2 others(93): Show |
a0001a0002a0004others(9): Show | a0001c0001a0001c0003a0001c0016others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(30): Show | a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 others(92): Show |
96 | 156 | 0.6154 | -6 | c.278 others(25): Show |
RTTN | ENSG00000176225.15 | transcript | ENST00000640769.2 | protein_coding | 21/48 | chr18 | TogoVar | |||||||
RTTN_chr18_69998031_70210687 | 70176184 | CGTAGAT | C | intron_variant | MODIFIER | HG00639.hp1 HG01106.hp1 HG01168.hp2 others(27): Show |
a0002a0004a0005others(4): Show | a0002c0002a0004c0005a0005c0006others(4): Show | a0002c0002t0004a0004c0005t0001a0004c0005t0002others(10): Show | a0002c0002t0004g0108 a0002c0002t0004g0121 a0002c0002t0004g0153 others(26): Show |
30 | 156 | 0.1923 | -6 | c.147 others(23): Show |
RTTN | ENSG00000176225.15 | transcript | ENST00000640769.2 | protein_coding | 11/48 | chr18 | TogoVar | |||||||
RTTN_chr18_69998031_70210687 | 70176200 | GATGTAT | G | intron_variant | MODIFIER | HG00099.hp1 HG00621.hp2 HG00639.hp2 others(35): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0003a0001c0018others(9): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(14): Show | a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 others(34): Show |
38 | 156 | 0.2436 | -6 | c.147 others(23): Show |
RTTN | ENSG00000176225.15 | transcript | ENST00000640769.2 | protein_coding | 11/48 | chr18 | TogoVar | |||||||
RUBCNL_chr13_46329681_46392252 | 46362933 | TATATAG | T | intron_variant | MODIFIER | HG00558.hp2 HG01358.hp1 HG02559.hp2 others(4): Show |
a0001a0002 | a0001c0001a0001c0010a0002c0002 | a0001c0001t0002a0001c0001t0096a0001c0010t0027others(3): Show | a0001c0001t0002g0250 a0001c0001t0096g0311 a0001c0010t0027g0024 others(4): Show |
7 | 356 | 0.0197 | -6 | c.925 others(21): Show |
RUBCNL | ENSG00000102445.20 | transcript | ENST00000429979.6 | protein_coding | 6/14 | chr13 | TogoVar | |||||||
RUBCN_chr3_197663867_197741904 | 197730885 | CTTTTTT | C | intron_variant | MODIFIER | HG01891.hp1 HG02055.hp1 HG02257.hp2 others(6): Show |
a0003a0004 | a0003c0004a0004c0005 | a0003c0004t0006a0003c0004t0043a0004c0005t0005others(2): Show | a0003c0004t0006g0164 a0003c0004t0043g0165 a0004c0005t0005g0150 others(6): Show |
9 | 186 | 0.0484 | -6 | c.65+ others(21): Show |
RUBCN | ENSG00000145016.17 | transcript | ENST00000296343.10 | protein_coding | 1/19 | chr3 | TogoVar |