view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SSX4_chrX_48378539_48398347 | 48381114 | TTCTTTC | T | upstream_gene_variant | MODIFIER | HG02809.hp1 HG02897.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0004 a0001c0001t0002g0027 |
2 | 104 | 0.0192 | -6 | c.-24 others(17): Show |
SSX4 | ENSG00000268009.6 | transcript | ENST00000595689.3 | protein_coding | 2424 | chrX | TogoVar | |||||||
SSX4_chrX_48378539_48398347 | 48384992 | GTCTCTC | G | intron_variant | MODIFIER | HG03516.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0024 | 1 | 104 | 0.0096 | -6 | c.184 others(21): Show |
SSX4 | ENSG00000268009.6 | transcript | ENST00000595689.3 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SSX5_chrX_48181220_48201795 | 48181868 | GTTTCCC | G | downstream_gene_variant | MODIFIER | HG02523.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 326 | 0.0031 | -6 | c.*49 others(17): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 4351 | chrX | TogoVar | |||||||
SSX5_chrX_48181220_48201795 | 48186365 | GGTGTGT | G | 3_prime_UTR_variant | MODIFIER | HG00735.hp2 HG02809.hp2 HG02922.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0031a0001c0001t0040 | a0001c0001t0011g0020 a0001c0001t0011g0085 a0001c0001t0011g0131 others(2): Show |
7 | 326 | 0.0215 | -6 | c.*49 others(15): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 8/8 | 1260 | chrX | TogoVar | ||||||
SSX5_chrX_48181220_48201795 | 48186399 | TGTGTGC | T | 3_prime_UTR_variant | MODIFIER | HG00423.hp1 | a0001 | a0001c0001 | a0001c0001t0030 | a0001c0001t0030g0104 | 1 | 326 | 0.0031 | -6 | c.*45 others(15): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 8/8 | 1226 | chrX | TogoVar | ||||||
SSX5_chrX_48181220_48201795 | 48196834 | ATCCCAG | A | upstream_gene_variant | MODIFIER | HG01123.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 326 | 0.0031 | -6 | c.-13 others(15): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 40 | chrX | TogoVar | |||||||
SSX7_chrX_52639061_52659900 | 52641970 | AAAACAC | A | downstream_gene_variant | MODIFIER | HG01255.hp1 HG02258.hp1 HG02486.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0016 a0001c0001t0001g0028 a0001c0001t0001g0029 others(7): Show |
11 | 305 | 0.0361 | -6 | c.*26 others(17): Show |
SSX7 | ENSG00000187754.9 | transcript | ENST00000298181.6 | protein_coding | 2090 | chrX | TogoVar | |||||||
ST13_chr22_40819535_40861639 | 40821792 | GTATATA | G | downstream_gene_variant | MODIFIER | HG00597.hp2 HG00609.hp1 HG00621.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0047 a0001c0001t0001g0179 |
3 | 344 | 0.0087 | -6 | c.*47 others(17): Show |
ST13 | ENSG00000100380.15 | transcript | ENST00000216218.8 | protein_coding | 2742 | chr22 | TogoVar | |||||||
ST13_chr22_40819535_40861639 | 40836469 | AAAAAGT | A | intron_variant | MODIFIER | HG01934.hp2 HG02809.hp1 HG03098.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0030 a0001c0001t0005g0061 a0001c0001t0005g0062 |
4 | 344 | 0.0116 | -6 | c.383 others(21): Show |
ST13 | ENSG00000100380.15 | transcript | ENST00000216218.8 | protein_coding | 5/11 | chr22 | TogoVar | |||||||
ST14_chr11_130154782_130215362 | 130164718 | CTTATTA | C | intron_variant | MODIFIER | HG01891.hp1 HG02055.hp2 HG02257.hp1 others(12): Show |
a0001a0002a0006 | a0001c0001a0002c0004a0002c0006others(1): Show | a0001c0001t0001a0002c0004t0002a0002c0006t0001others(1): Show | a0001c0001t0001g0007 a0001c0001t0001g0148 a0001c0001t0001g0233 others(10): Show |
15 | 292 | 0.0514 | -6 | c.81+ others(21): Show |
ST14 | ENSG00000149418.11 | transcript | ENST00000278742.6 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST18_chr8_52105838_52414756 | 52113954 | GTTTTTT | G | intron_variant | MODIFIER | HG00741.hp1 HG00741.hp2 HG02080.hp2 others(10): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0010others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0047 a0001c0001t0002g0077 a0001c0001t0002g0095 others(10): Show |
13 | 104 | 0.1250 | -6 | c.300 others(23): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 25/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52211377 | AATTATT | A | intron_variant | MODIFIER | HG01884.hp2 NA18522.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0009 | a0001c0001t0005g0011 a0001c0001t0009g0043 |
2 | 104 | 0.0192 | -6 | c.86+ others(19): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 8/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52333909 | AAAAGCC | A | intron_variant | MODIFIER | HG00558.hp2 HG01261.hp1 HG02083.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(3): Show | a0001c0001t0001g0001 a0001c0001t0002g0013 a0001c0001t0002g0020 others(5): Show |
8 | 104 | 0.0769 | -6 | c.-46 others(27): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52357676 | AATATAT | A | intron_variant | MODIFIER | HG02258.hp1 HG02976.hp1 HG03041.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0002g0075 others(3): Show |
6 | 104 | 0.0577 | -6 | c.-46 others(27): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133487348 | TTTAACA | T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(288): Show |
a0001a0003a0004others(2): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0014others(68): Show | a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0025 others(288): Show |
291 | 332 | 0.8765 | -6 | c.-37 others(27): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 3/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133497455 | AATTTTT | A | intron_variant | MODIFIER | HG00438.hp2 HG01884.hp1 HG02080.hp1 others(30): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0040a0001c0002t0002others(11): Show | a0001c0001t0001g0103 a0001c0001t0001g0118 a0001c0001t0001g0148 others(30): Show |
33 | 332 | 0.0994 | -6 | c.-37 others(25): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 3/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133541076 | TATAGAC | T | intron_variant | MODIFIER | HG03540.hp2 NA18612.hp1 NA18954.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0055 a0001c0002t0002g0087 a0001c0002t0002g0119 |
3 | 332 | 0.0090 | -6 | c.-42 others(25): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 2/9 | chr8 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70389202 | CAAAAAA | C | intron_variant | MODIFIER | HG01433.hp1 HG02109.hp1 HG02109.hp2 others(9): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0007a0001c0001t0010a0001c0001t0023others(7): Show | a0001c0001t0007g0293 a0001c0001t0007g0295 a0001c0001t0010g0284 others(9): Show |
12 | 312 | 0.0385 | -6 | c.534 others(21): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 3/6 | chr16 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70421856 | CATAGGG | C | intron_variant | MODIFIER | HG01433.hp1 HG02109.hp1 HG02109.hp2 others(31): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0007a0001c0001t0010a0001c0001t0023others(15): Show | a0001c0001t0007g0287 a0001c0001t0007g0288 a0001c0001t0007g0289 others(31): Show |
34 | 312 | 0.1090 | -6 | c.-10 others(29): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL3_chr1_43702536_43936159 | 43759063 | GCGCACA | G | intron_variant | MODIFIER | HG01361.hp1 HG02132.hp1 HG02622.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0251 a0001c0001t0001g0258 a0001c0001t0002g0023 others(4): Show |
7 | 274 | 0.0256 | -6 | c.118 others(25): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43771730 | TTGTGTG | T | intron_variant | MODIFIER | HG00323.hp1 HG00558.hp2 HG00642.hp2 others(25): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0005 a0001c0001t0001g0066 a0001c0001t0002g0003 others(25): Show |
28 | 274 | 0.1022 | -6 | c.119 others(25): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43813889 | ACACACG | A | intron_variant | MODIFIER | HG02559.hp1 HG02647.hp2 HG03209.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0245 a0001c0001t0001g0257 a0001c0001t0001g0259 others(2): Show |
5 | 274 | 0.0183 | -6 | c.167 others(21): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43813895 | GCACACA | G | intron_variant | MODIFIER | HG02132.hp1 HG02145.hp1 HG02451.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0070 a0001c0001t0001g0260 a0001c0001t0002g0055 others(5): Show |
8 | 274 | 0.0292 | -6 | c.167 others(21): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43813903 | GCACACA | G | intron_variant | MODIFIER | HG00544.hp2 HG00621.hp2 HG00639.hp1 others(61): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0010 | a0001c0001t0001g0005 a0001c0001t0001g0064 a0001c0001t0001g0066 others(61): Show |
64 | 274 | 0.2336 | -6 | c.167 others(21): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43817641 | TCTCCTC | T | intron_variant | MODIFIER | HG01891.hp1 HG02055.hp2 HG02258.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0198 a0001c0001t0001g0242 a0001c0001t0001g0243 others(14): Show |
17 | 274 | 0.0620 | -6 | c.209 others(23): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43827954 | TGAAGAA | T | intron_variant | MODIFIER | NA18973.hp1 NA18982.hp1 NA18990.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0014 a0001c0001t0004g0024 a0001c0001t0004g0044 others(2): Show |
5 | 274 | 0.0183 | -6 | c.210 others(25): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43829995 | CTTTTTT | C | intron_variant | MODIFIER | HG00408.hp1 HG00558.hp2 HG01074.hp2 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(3): Show | a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0002g0135 others(23): Show |
26 | 274 | 0.0949 | -6 | c.210 others(23): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43875897 | CTCTTCT | C | intron_variant | MODIFIER | HG02165.hp2 HG02615.hp1 HG02735.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0203 a0001c0001t0003g0204 a0001c0001t0003g0209 others(6): Show |
9 | 274 | 0.0329 | -6 | c.303 others(25): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43875947 | CTTCTTA | C | intron_variant | MODIFIER | HG01952.hp2 HG02132.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0224 a0001c0001t0003g0229 |
2 | 274 | 0.0073 | -6 | c.303 others(25): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43917627 | TATAATA | T | intron_variant | MODIFIER | HG02559.hp1 HG03209.hp1 NA18906.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0072 a0001c0001t0001g0257 a0001c0001t0001g0259 |
3 | 274 | 0.0110 | -6 | c.745 others(23): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 9/11 | chr1 | TogoVar | |||||||
ST3GAL4_chr11_126350686_126419638 | 126390618 | CTTTTTT | C | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00544.hp1 others(109): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0010others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0026 a0001c0001t0001g0028 others(106): Show |
112 | 324 | 0.3457 | -6 | c.-60 others(25): Show |
ST3GAL4 | ENSG00000110080.20 | transcript | ENST00000444328.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST3GAL4_chr11_126350686_126419638 | 126391967 | GTGTGTA | G | intron_variant | MODIFIER | HG01261.hp2 HG04115.hp1 HG06807.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0011 a0001c0001t0001g0190 a0001c0001t0001g0195 others(1): Show |
4 | 324 | 0.0124 | -6 | c.-60 others(25): Show |
ST3GAL4 | ENSG00000110080.20 | transcript | ENST00000444328.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST3GAL5_chr2_85832120_85893990 | 85849855 | AGTGTGT | A | intron_variant | MODIFIER | HG00423.hp1 HG00558.hp1 HG00558.hp2 others(74): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0006 | a0001c0001t0001a0002c0002t0002a0002c0002t0003others(5): Show | a0001c0001t0001g0088 a0002c0002t0002g0178 a0002c0002t0002g0205 others(63): Show |
77 | 370 | 0.2081 | -6 | c.319 others(23): Show |
ST3GAL5 | ENSG00000115525.18 | transcript | ENST00000638572.2 | protein_coding | 3/6 | chr2 | TogoVar | |||||||
ST6GAL1_chr3_186925526_187083553 | 186926202 | CATATAT | C | upstream_gene_variant | MODIFIER | HG01069.hp1 HG01071.hp1 HG01167.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(1): Show | a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 others(6): Show |
9 | 362 | 0.0249 | -6 | c.-49 others(17): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 4323 | chr3 | TogoVar | |||||||
ST6GAL1_chr3_186925526_187083553 | 186946381 | CTTATTA | C | intron_variant | MODIFIER | HG00735.hp1 HG01256.hp2 HG02055.hp2 others(15): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0004a0001c0001t0009a0001c0001t0018others(9): Show | a0001c0001t0004g0058 a0001c0001t0004g0059 a0001c0001t0009g0060 others(15): Show |
18 | 362 | 0.0497 | -6 | c.-32 others(27): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 186948528 | AGTGTGT | A | intron_variant | MODIFIER | HG00609.hp2 HG00621.hp2 HG01891.hp1 others(32): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(16): Show | a0001c0001t0001g0128 a0001c0001t0002g0049 a0001c0001t0004g0046 others(32): Show |
35 | 362 | 0.0967 | -6 | c.-32 others(27): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187024474 | GTATATA | G | intron_variant | MODIFIER | HG00280.hp2 HG00438.hp2 HG00597.hp1 others(29): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0132 a0001c0001t0001g0176 a0001c0001t0001g0193 others(29): Show |
32 | 362 | 0.0884 | -6 | c.-18 others(27): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187024489 | TATATAG | T | intron_variant | MODIFIER | HG00423.hp2 HG00558.hp1 HG00597.hp2 others(45): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0089 a0001c0001t0001g0169 a0001c0001t0001g0196 others(45): Show |
48 | 362 | 0.1326 | -6 | c.-18 others(27): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187024491 | TATAGAG | T | intron_variant | MODIFIER | HG00323.hp2 HG00673.hp1 HG01069.hp2 others(43): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0172 others(43): Show |
46 | 362 | 0.1271 | -6 | c.-18 others(27): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187024493 | TAGAGAG | T | intron_variant | MODIFIER | HG00408.hp2 HG00544.hp1 HG00558.hp2 others(43): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0074 a0001c0001t0001g0139 a0001c0001t0001g0160 others(42): Show |
46 | 362 | 0.1271 | -6 | c.-18 others(27): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187050534 | AAGAGAG | A | intron_variant | MODIFIER | HG01256.hp2 HG01891.hp1 HG02257.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0011a0001c0001t0056a0001c0001t0066others(4): Show | a0001c0001t0011g0144 a0001c0001t0056g0223 a0001c0001t0066g0005 others(6): Show |
9 | 362 | 0.0249 | -6 | c.608 others(21): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187062574 | TCACACA | T | intron_variant | MODIFIER | HG00735.hp1 HG01074.hp2 HG01109.hp1 others(31): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0009others(16): Show | a0001c0001t0003g0133 a0001c0001t0003g0157 a0001c0001t0003g0360 others(31): Show |
34 | 362 | 0.0939 | -6 | c.706 others(25): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187066601 | CGTGTGT | C | intron_variant | MODIFIER | HG00735.hp1 HG02559.hp1 HG02976.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0056a0001c0002t0008a0001c0003t0049 | a0001c0001t0056g0223 a0001c0002t0008g0029 a0001c0002t0008g0149 others(1): Show |
4 | 362 | 0.0111 | -6 | c.706 others(23): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL2_chr2_106796600_106891167 | 106803612 | TAACAAC | T | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00423.hp1 HG00544.hp1 others(118): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0001c0004others(11): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0013others(34): Show | a0001c0001t0001g0058 a0001c0001t0001g0304 a0001c0001t0001g0324 others(112): Show |
121 | 372 | 0.3253 | -6 | c.*30 others(17): Show |
ST6GAL2 | ENSG00000144057.16 | transcript | ENST00000409382.8 | protein_coding | 6/6 | 3060 | chr2 | TogoVar | ||||||
ST6GAL2_chr2_106796600_106891167 | 106884930 | TATATAC | T | intron_variant | MODIFIER | HG02559.hp2 HG03579.hp2 NA18906.hp1 |
a0008 | a0008c0012 | a0008c0012t0001a0008c0012t0020 | a0008c0012t0001g0159 a0008c0012t0001g0160 a0008c0012t0020g0158 |
3 | 372 | 0.0081 | -6 | c.-58 others(23): Show |
ST6GAL2 | ENSG00000144057.16 | transcript | ENST00000409382.8 | protein_coding | 1/5 | chr2 | TogoVar | |||||||
ST6GALNAC1_chr17_76619763_76648757 | 76631063 | CTCTGTG | C | intron_variant | MODIFIER | HG02965.hp1 HG03130.hp1 HG03139.hp2 |
a0003 | a0003c0002 | a0003c0002t0003 | a0003c0002t0003g0055 a0003c0002t0003g0056 a0003c0002t0003g0057 |
3 | 412 | 0.0073 | -6 | c.132 others(23): Show |
ST6GALNAC1 | ENSG00000070526.15 | transcript | ENST00000156626.12 | protein_coding | 1/8 | chr17 | TogoVar | |||||||
ST6GALNAC1_chr17_76619763_76648757 | 76631065 | CTGTGTG | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(191): Show |
a0001a0004a0005others(4): Show | a0001c0001a0001c0005a0001c0013others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(141): Show |
194 | 412 | 0.4709 | -6 | c.132 others(23): Show |
ST6GALNAC1 | ENSG00000070526.15 | transcript | ENST00000156626.12 | protein_coding | 1/8 | chr17 | TogoVar | |||||||
ST6GALNAC1_chr17_76619763_76648757 | 76639638 | AACACAC | A | intron_variant | MODIFIER | HG00642.hp2 HG02083.hp2 HG02273.hp2 others(31): Show |
a0001a0003a0007 | a0001c0001a0003c0002a0007c0017 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0119 a0001c0001t0001g0134 a0001c0001t0001g0135 others(28): Show |
34 | 412 | 0.0825 | -6 | c.131 others(23): Show |
ST6GALNAC1 | ENSG00000070526.15 | transcript | ENST00000156626.12 | protein_coding | 1/8 | chr17 | TogoVar | |||||||
ST6GALNAC3_chr1_76069746_76639603 | 76102235 | TTGTGTG | T | intron_variant | MODIFIER | HG00140.hp1 HG03540.hp1 HG04184.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0018a0002c0002t0001 | a0001c0001t0018g0075 a0002c0002t0001g0078 a0002c0002t0001g0079 |
3 | 102 | 0.0294 | -6 | c.18+ others(23): Show |
ST6GALNAC3 | ENSG00000184005.12 | transcript | ENST00000328299.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST6GALNAC3_chr1_76069746_76639603 | 76113341 | AGGGAGG | A | intron_variant | MODIFIER | HG01255.hp2 HG02647.hp1 HG02717.hp1 others(1): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0003a0001c0001t0017a0001c0003t0002others(1): Show | a0001c0001t0003g0014 a0001c0001t0017g0010 a0001c0003t0002g0024 others(1): Show |
4 | 102 | 0.0392 | -6 | c.18+ others(23): Show |
ST6GALNAC3 | ENSG00000184005.12 | transcript | ENST00000328299.4 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar |