Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ST8SIA6_chr10_17310421_17459595	17448592	TTTATTG TTTATTG	T T	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02451.hp1 HG03486.hp1 others(1): Show HG01255.hp2 HG02451.hp1 HG03486.hp1 HG03516.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0002c0002t0001 a0002c0002t0024 a0001c0001t0003 a0002c0002t0001 a0002c0002t0024	a0001c0001t0003g0254 a0002c0002t0001g0014 a0002c0002t0001g0015 others(1): Show a0001c0001t0003g0254 a0002c0002t0001g0014 a0002c0002t0001g0015 a0002c0002t0024g0013	4	296	0.0135	-6	c.200 others(23): Show c.200+4961_200+4966delCAATAA	ST8SIA6	ENSG00000148488.17	transcript	ENST00000377602.5	protein_coding	2/7			chr10	TogoVar
STAB1_chr3_52490338_52529495	52492826	TTGTTGC TTGTTGC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(338): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18952.hp1 NA18952.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18999.hp1 NA18999.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(33): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019 a0020 a0021 a0022 a0023 a0024 a0025 a0026 a0027 a0028 a0029 a0030 a0032 a0033 a0034 a0035 a0036 a0037 a0038	a0001c0001 a0001c0002 a0001c0020 others(70): Show a0001c0001 a0001c0002 a0001c0020 a0001c0023 a0001c0026 a0001c0030 a0001c0042 a0001c0045 a0001c0056 a0001c0057 a0002c0003 a0002c0004 a0002c0009 a0002c0011 a0002c0014 a0002c0017 a0002c0019 a0002c0021 a0002c0022 a0002c0024 a0002c0025 a0002c0058 a0002c0070 a0002c0071 a0002c0074 a0003c0005 a0003c0006 a0003c0007 a0003c0008 a0003c0013 a0003c0015 a0003c0027 a0003c0029 a0003c0038 a0003c0041 a0003c0043 a0003c0052 a0003c0055 a0003c0062 a0004c0010 a0004c0073 a0005c0012 a0006c0016 a0007c0018 a0008c0031 a0009c0028 a0011c0048 a0012c0075 a0013c0046 a0014c0072 a0015c0064 a0016c0061 a0017c0067 a0018c0033 a0019c0066 a0020c0039 a0021c0054 a0022c0034 a0023c0051 a0024c0037 a0025c0053 a0026c0032 a0027c0063 a0028c0040 a0029c0047 a0030c0049 a0032c0035 a0033c0069 a0034c0044 a0035c0076 a0036c0078 a0037c0036 a0038c0059	a0001c0001t0001 a0001c0002t0001 a0001c0020t0001 others(70): Show a0001c0001t0001 a0001c0002t0001 a0001c0020t0001 a0001c0023t0001 a0001c0026t0001 a0001c0030t0001 a0001c0042t0001 a0001c0045t0001 a0001c0056t0001 a0001c0057t0001 a0002c0003t0001 a0002c0004t0001 a0002c0009t0001 a0002c0011t0001 a0002c0014t0001 a0002c0017t0001 a0002c0019t0001 a0002c0021t0001 a0002c0022t0001 a0002c0024t0001 a0002c0025t0001 a0002c0058t0001 a0002c0070t0001 a0002c0071t0001 a0002c0074t0001 a0003c0005t0001 a0003c0006t0001 a0003c0007t0001 a0003c0008t0001 a0003c0013t0001 a0003c0015t0001 a0003c0027t0001 a0003c0029t0001 a0003c0038t0001 a0003c0041t0001 a0003c0043t0001 a0003c0052t0001 a0003c0055t0001 a0003c0062t0001 a0004c0010t0001 a0004c0073t0001 a0005c0012t0001 a0006c0016t0001 a0007c0018t0001 a0008c0031t0001 a0009c0028t0001 a0011c0048t0001 a0012c0075t0001 a0013c0046t0001 a0014c0072t0001 a0015c0064t0001 a0016c0061t0001 a0017c0067t0001 a0018c0033t0001 a0019c0066t0001 a0020c0039t0001 a0021c0054t0001 a0022c0034t0001 a0023c0051t0001 a0024c0037t0003 a0025c0053t0001 a0026c0032t0001 a0027c0063t0001 a0028c0040t0001 a0029c0047t0001 a0030c0049t0001 a0032c0035t0001 a0033c0069t0001 a0034c0044t0001 a0035c0076t0001 a0036c0078t0001 a0037c0036t0001 a0038c0059t0001	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(216): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0028 a0001c0001t0001g0038 a0001c0001t0001g0041 a0001c0001t0001g0048 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0099 a0001c0001t0001g0110 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0136 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0171 a0001c0001t0001g0176 a0001c0001t0001g0180 a0001c0001t0001g0189 a0001c0002t0001g0001 a0001c0002t0001g0004 a0001c0002t0001g0037 a0001c0002t0001g0087 a0001c0002t0001g0088 a0001c0002t0001g0114 a0001c0002t0001g0131 a0001c0002t0001g0134 a0001c0002t0001g0135 a0001c0002t0001g0137 a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0002t0001g0147 a0001c0002t0001g0150 a0001c0002t0001g0160 a0001c0002t0001g0177 a0001c0002t0001g0178 a0001c0002t0001g0190 a0001c0002t0001g0194 a0001c0020t0001g0031 a0001c0020t0001g0079 a0001c0023t0001g0004 a0001c0023t0001g0056 a0001c0026t0001g0010 a0001c0030t0001g0124 a0001c0030t0001g0139 a0001c0042t0001g0001 a0001c0045t0001g0094 a0001c0056t0001g0181 a0001c0057t0001g0039 a0002c0003t0001g0002 a0002c0003t0001g0003 a0002c0003t0001g0011 a0002c0003t0001g0012 a0002c0003t0001g0013 a0002c0003t0001g0015 a0002c0003t0001g0016 a0002c0003t0001g0033 a0002c0003t0001g0059 a0002c0003t0001g0060 a0002c0003t0001g0062 a0002c0003t0001g0063 a0002c0003t0001g0066 a0002c0003t0001g0074 a0002c0003t0001g0096 a0002c0003t0001g0097 a0002c0003t0001g0102 a0002c0003t0001g0103 a0002c0003t0001g0104 a0002c0003t0001g0106 a0002c0003t0001g0108 a0002c0003t0001g0162 a0002c0003t0001g0166 a0002c0003t0001g0185 a0002c0003t0001g0187 a0002c0003t0001g0188 a0002c0004t0001g0002 a0002c0004t0001g0003 a0002c0004t0001g0012 a0002c0004t0001g0015 a0002c0004t0001g0032 a0002c0004t0001g0034 a0002c0004t0001g0042 a0002c0004t0001g0073 a0002c0004t0001g0090 a0002c0004t0001g0092 a0002c0004t0001g0095 a0002c0004t0001g0105 a0002c0004t0001g0175 a0002c0009t0001g0007 a0002c0009t0001g0030 a0002c0011t0001g0002 a0002c0011t0001g0018 a0002c0011t0001g0042 a0002c0011t0001g0070 a0002c0011t0001g0168 a0002c0011t0001g0174 a0002c0014t0001g0013 a0002c0014t0001g0076 a0002c0014t0001g0093 a0002c0014t0001g0107 a0002c0017t0001g0083 a0002c0017t0001g0111 a0002c0019t0001g0011 a0002c0021t0001g0161 a0002c0021t0001g0169 a0002c0022t0001g0003 a0002c0024t0001g0002 a0002c0024t0001g0182 a0002c0025t0001g0025 a0002c0058t0001g0123 a0002c0070t0001g0032 a0002c0071t0001g0101 a0002c0074t0001g0129 a0003c0005t0001g0006 a0003c0005t0001g0026 a0003c0005t0001g0027 a0003c0005t0001g0050 a0003c0005t0001g0051 a0003c0005t0001g0057 a0003c0005t0001g0058 a0003c0005t0001g0113 a0003c0006t0001g0029 a0003c0006t0001g0068 a0003c0006t0001g0075 a0003c0006t0001g0100 a0003c0006t0001g0151 a0003c0006t0001g0183 a0003c0007t0001g0009 a0003c0007t0001g0017 a0003c0007t0001g0035 a0003c0008t0001g0023 a0003c0008t0001g0024 a0003c0008t0001g0043 a0003c0008t0001g0047 a0003c0008t0001g0072 a0003c0008t0001g0192 a0003c0008t0001g0193 a0003c0013t0001g0061 a0003c0013t0001g0064 a0003c0013t0001g0065 a0003c0013t0001g0089 a0003c0015t0001g0021 a0003c0015t0001g0146 a0003c0027t0001g0040 a0003c0029t0001g0036 a0003c0038t0001g0086 a0003c0041t0001g0046 a0003c0043t0001g0153 a0003c0052t0001g0043 a0003c0055t0001g0081 a0003c0062t0001g0191 a0004c0010t0001g0002 a0004c0010t0001g0003 a0004c0010t0001g0012 a0004c0010t0001g0154 a0004c0010t0001g0179 a0004c0073t0001g0165 a0005c0012t0001g0002 a0005c0012t0001g0003 a0005c0012t0001g0167 a0005c0012t0001g0172 a0005c0012t0001g0173 a0006c0016t0001g0001 a0007c0018t0001g0163 a0007c0018t0001g0170 a0007c0018t0001g0184 a0008c0031t0001g0152 a0009c0028t0001g0052 a0009c0028t0001g0054 a0011c0048t0001g0133 a0012c0075t0001g0033 a0013c0046t0001g0005 a0014c0072t0001g0085 a0015c0064t0001g0069 a0016c0061t0001g0019 a0017c0067t0001g0002 a0018c0033t0001g0003 a0019c0066t0001g0186 a0020c0039t0001g0055 a0021c0054t0001g0080 a0022c0034t0001g0049 a0023c0051t0001g0109 a0024c0037t0003g0082 a0025c0053t0001g0126 a0026c0032t0001g0125 a0027c0063t0001g0002 a0028c0040t0001g0053 a0029c0047t0001g0001 a0030c0049t0001g0084 a0032c0035t0001g0122 a0033c0069t0001g0112 a0034c0044t0001g0005 a0035c0076t0001g0098 a0036c0078t0001g0006 a0037c0036t0001g0001 a0038c0059t0001g0121	341	368	0.9266	-6	c.-25 others(17): Show c.-2587_-2582delTGTTGC	STAB1	ENSG00000010327.10	transcript	ENST00000321725.10	protein_coding		2511		chr3	TogoVar
STAB2_chr12_103582273_103771719	103701977	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp1 HG00558.hp2 others(23): Show HG00408.hp2 HG00438.hp1 HG00558.hp2 HG00609.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01243.hp2 HG01261.hp2 HG01361.hp2 HG01496.hp2 HG02572.hp1 HG02683.hp1 HG02738.hp2 HG02818.hp1 HG03486.hp2 HG03491.hp2 HG03688.hp1 HG03688.hp2 HG03942.hp1 NA18993.hp2 NA19000.hp2 NA19068.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0012 a0019 a0025 a0028	a0001c0002 a0001c0003 a0001c0015 others(12): Show a0001c0002 a0001c0003 a0001c0015 a0001c0082 a0001c0089 a0002c0008 a0002c0017 a0002c0035 a0002c0037 a0003c0028 a0005c0027 a0012c0078 a0019c0143 a0025c0050 a0028c0137	a0001c0002t0001 a0001c0003t0001 a0001c0003t0008 others(13): Show a0001c0002t0001 a0001c0003t0001 a0001c0003t0008 a0001c0015t0001 a0001c0082t0001 a0001c0089t0001 a0002c0008t0001 a0002c0017t0001 a0002c0035t0006 a0002c0037t0001 a0003c0028t0001 a0005c0027t0001 a0012c0078t0001 a0019c0143t0001 a0025c0050t0001 a0028c0137t0001	a0001c0002t0001g0143 a0001c0002t0001g0183 a0001c0002t0001g0236 others(23): Show a0001c0002t0001g0143 a0001c0002t0001g0183 a0001c0002t0001g0236 a0001c0003t0001g0021 a0001c0003t0001g0068 a0001c0003t0001g0189 a0001c0003t0001g0201 a0001c0003t0008g0163 a0001c0015t0001g0120 a0001c0082t0001g0117 a0001c0089t0001g0172 a0002c0008t0001g0220 a0002c0008t0001g0234 a0002c0017t0001g0182 a0002c0017t0001g0225 a0002c0035t0006g0218 a0002c0037t0001g0161 a0002c0037t0001g0205 a0003c0028t0001g0147 a0003c0028t0001g0148 a0005c0027t0001g0063 a0005c0027t0001g0146 a0012c0078t0001g0154 a0019c0143t0001g0216 a0025c0050t0001g0048 a0028c0137t0001g0053	26	256	0.1016	-6	c.371 others(25): Show c.3715-1130_3715-1125delACACAC	STAB2	ENSG00000136011.15	transcript	ENST00000388887.7	protein_coding	34/68		INFO_REALIGN_3_PRIME	chr12	TogoVar
STAB2_chr12_103582273_103771719	103711017	TTTATAA TTTATAA	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01243.hp2 HG02895.hp2 others(5): Show HG01081.hp2 HG01243.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG03486.hp2 HG03579.hp2	a0002 a0011 a0014 others(2): Show a0002 a0011 a0014 a0019 a0037	a0002c0035 a0002c0102 a0011c0025 others(3): Show a0002c0035 a0002c0102 a0011c0025 a0014c0024 a0019c0143 a0037c0136	a0002c0035t0006 a0002c0102t0001 a0011c0025t0002 others(3): Show a0002c0035t0006 a0002c0102t0001 a0011c0025t0002 a0014c0024t0005 a0019c0143t0001 a0037c0136t0002	a0002c0035t0006g0218 a0002c0102t0001g0158 a0011c0025t0002g0032 others(4): Show a0002c0035t0006g0218 a0002c0102t0001g0158 a0011c0025t0002g0032 a0011c0025t0002g0033 a0014c0024t0005g0001 a0019c0143t0001g0216 a0037c0136t0002g0043	8	256	0.0313	-6	c.428 others(23): Show c.4289-448_4289-443delATTATA	STAB2	ENSG00000136011.15	transcript	ENST00000388887.7	protein_coding	39/68		INFO_REALIGN_3_PRIME	chr12	TogoVar
STAB2_chr12_103582273_103771719	103737596	CTCTCTT CTCTCTT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp1 HG00642.hp1 others(25): Show HG00408.hp2 HG00438.hp1 HG00642.hp1 HG00733.hp1 HG01106.hp2 HG01123.hp2 HG01169.hp2 HG01346.hp2 HG01515.hp1 HG01517.hp2 HG02015.hp2 HG02602.hp1 HG02683.hp1 HG03491.hp2 HG03927.hp2 HG04115.hp2 NA18941.hp1 NA18944.hp2 NA18967.hp1 NA18982.hp2 NA18993.hp2 NA19007.hp1 NA19007.hp2 NA19012.hp1 NA19054.hp2 NA19085.hp1 NA19085.hp2 NA21309.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0007	a0001c0001 a0001c0002 a0001c0003 others(19): Show a0001c0001 a0001c0002 a0001c0003 a0001c0014 a0001c0015 a0001c0044 a0001c0088 a0001c0089 a0001c0106 a0001c0112 a0002c0005 a0002c0007 a0002c0008 a0002c0017 a0002c0037 a0002c0045 a0002c0079 a0003c0048 a0003c0134 a0006c0019 a0007c0010 a0007c0110	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(19): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0001c0014t0001 a0001c0015t0001 a0001c0044t0001 a0001c0088t0001 a0001c0089t0001 a0001c0106t0001 a0001c0112t0001 a0002c0005t0001 a0002c0007t0001 a0002c0008t0001 a0002c0017t0001 a0002c0037t0001 a0002c0045t0001 a0002c0079t0001 a0003c0048t0001 a0003c0134t0001 a0006c0019t0001 a0007c0010t0001 a0007c0110t0001	a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0002t0001g0094 others(25): Show a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0002t0001g0094 a0001c0002t0001g0143 a0001c0003t0001g0068 a0001c0014t0001g0180 a0001c0014t0001g0194 a0001c0015t0001g0230 a0001c0015t0001g0231 a0001c0044t0001g0121 a0001c0088t0001g0113 a0001c0089t0001g0172 a0001c0106t0001g0129 a0001c0112t0001g0202 a0002c0005t0001g0241 a0002c0007t0001g0059 a0002c0008t0001g0234 a0002c0017t0001g0085 a0002c0037t0001g0205 a0002c0045t0001g0103 a0002c0045t0001g0150 a0002c0079t0001g0233 a0003c0048t0001g0067 a0003c0134t0001g0036 a0006c0019t0001g0062 a0006c0019t0001g0089 a0007c0010t0001g0090 a0007c0110t0001g0152	28	256	0.1094	-6	c.555 others(21): Show c.5551-30_5551-25delCTCTTT	STAB2	ENSG00000136011.15	transcript	ENST00000388887.7	protein_coding	52/68		INFO_REALIGN_3_PRIME	chr12	TogoVar
STAB2_chr12_103582273_103771719	103739527	CTGTGTG CTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02280.hp2 HG02572.hp1 others(7): Show HG02129.hp1 HG02280.hp2 HG02572.hp1 HG02723.hp1 HG02809.hp1 HG02895.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 NA18960.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0023 a0025 a0034	a0001c0004 a0001c0018 a0002c0035 others(6): Show a0001c0004 a0001c0018 a0002c0035 a0002c0102 a0003c0031 a0004c0113 a0023c0068 a0025c0050 a0034c0083	a0001c0004t0001 a0001c0018t0002 a0002c0035t0006 others(6): Show a0001c0004t0001 a0001c0018t0002 a0002c0035t0006 a0002c0102t0001 a0003c0031t0001 a0004c0113t0002 a0023c0068t0001 a0025c0050t0001 a0034c0083t0002	a0001c0004t0001g0098 a0001c0004t0001g0247 a0001c0018t0002g0009 others(7): Show a0001c0004t0001g0098 a0001c0004t0001g0247 a0001c0018t0002g0009 a0002c0035t0006g0218 a0002c0102t0001g0158 a0003c0031t0001g0086 a0004c0113t0002g0046 a0023c0068t0001g0219 a0025c0050t0001g0048 a0034c0083t0002g0028	10	256	0.0391	-6	c.575 others(23): Show c.5754+100_5754+105delTGTGTG	STAB2	ENSG00000136011.15	transcript	ENST00000388887.7	protein_coding	54/68		INFO_REALIGN_3_PRIME	chr12	TogoVar
STAB2_chr12_103582273_103771719	103748599	CACACAT CACACAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01261.hp1 HG02486.hp1 others(7): Show HG00099.hp2 HG01261.hp1 HG02486.hp1 HG02602.hp1 HG02647.hp1 HG02717.hp2 HG02895.hp2 HG03471.hp1 HG03834.hp2 NA19043.hp2	a0001 a0002 a0041 others(1): Show a0001 a0002 a0041 a0045	a0001c0002 a0001c0020 a0001c0081 others(5): Show a0001c0002 a0001c0020 a0001c0081 a0001c0125 a0001c0127 a0002c0102 a0041c0090 a0045c0139	a0001c0002t0001 a0001c0020t0001 a0001c0081t0001 others(5): Show a0001c0002t0001 a0001c0020t0001 a0001c0081t0001 a0001c0125t0002 a0001c0127t0004 a0002c0102t0001 a0041c0090t0001 a0045c0139t0001	a0001c0002t0001g0094 a0001c0002t0001g0128 a0001c0020t0001g0126 others(7): Show a0001c0002t0001g0094 a0001c0002t0001g0128 a0001c0020t0001g0126 a0001c0020t0001g0212 a0001c0081t0001g0044 a0001c0125t0002g0136 a0001c0127t0004g0011 a0002c0102t0001g0158 a0041c0090t0001g0222 a0045c0139t0001g0217	10	256	0.0391	-6	c.624 others(23): Show c.6245-358_6245-353delTACACA	STAB2	ENSG00000136011.15	transcript	ENST00000388887.7	protein_coding	58/68		INFO_REALIGN_3_PRIME	chr12	TogoVar
STAB2_chr12_103582273_103771719	103748605	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00639.hp1 NA18965.hp1 HG00544.hp1 HG00639.hp1 NA18965.hp1	a0001 a0001	a0001c0006 a0001c0036 a0001c0093 a0001c0006 a0001c0036 a0001c0093	a0001c0006t0001 a0001c0036t0001 a0001c0093t0001 a0001c0006t0001 a0001c0036t0001 a0001c0093t0001	a0001c0006t0001g0042 a0001c0036t0001g0145 a0001c0093t0001g0227 a0001c0006t0001g0042 a0001c0036t0001g0145 a0001c0093t0001g0227	3	256	0.0117	-6	c.624 others(23): Show c.6245-309_6245-304delACACAC	STAB2	ENSG00000136011.15	transcript	ENST00000388887.7	protein_coding	58/68		INFO_REALIGN_3_PRIME	chr12	TogoVar
STAB2_chr12_103582273_103771719	103749841	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00544.hp2 HG00558.hp1 others(70): Show HG00280.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00741.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01258.hp2 HG01261.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01952.hp2 HG01978.hp1 HG02027.hp2 HG02109.hp2 HG02129.hp1 HG02148.hp1 HG02300.hp1 HG02486.hp2 HG02602.hp2 HG02615.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG02970.hp2 HG03209.hp1 HG03209.hp2 HG03471.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03834.hp1 HG03942.hp2 NA18522.hp2 NA18939.hp2 NA18942.hp2 NA18960.hp1 NA18964.hp1 NA18982.hp1 NA18982.hp2 NA18989.hp1 NA18993.hp1 NA18993.hp2 NA19000.hp1 NA19007.hp2 NA19012.hp1 NA19043.hp1 NA19054.hp1 NA19068.hp2 NA19088.hp1 NA19088.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(18): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0011 a0012 a0017 a0019 a0020 a0022 a0023 a0026 a0027 a0028 a0038 a0043 a0046	a0001c0001 a0001c0002 a0001c0004 others(53): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0014 a0001c0015 a0001c0021 a0001c0039 a0001c0082 a0001c0084 a0001c0126 a0002c0005 a0002c0007 a0002c0008 a0002c0009 a0002c0011 a0002c0017 a0002c0034 a0002c0035 a0002c0037 a0002c0045 a0002c0064 a0002c0079 a0002c0092 a0002c0114 a0002c0120 a0002c0122 a0002c0131 a0003c0013 a0004c0016 a0004c0040 a0004c0076 a0005c0027 a0005c0056 a0005c0057 a0005c0062 a0006c0019 a0006c0117 a0006c0118 a0007c0010 a0007c0077 a0008c0023 a0011c0025 a0012c0078 a0012c0119 a0017c0060 a0019c0143 a0020c0054 a0022c0135 a0023c0068 a0026c0100 a0027c0073 a0028c0137 a0038c0111 a0043c0123 a0046c0091	a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 others(53): Show a0001c0001t0001 a0001c0002t0001 a0001c0004t0001 a0001c0006t0001 a0001c0014t0001 a0001c0015t0001 a0001c0021t0002 a0001c0039t0001 a0001c0082t0001 a0001c0084t0002 a0001c0126t0001 a0002c0005t0001 a0002c0007t0001 a0002c0008t0001 a0002c0009t0001 a0002c0011t0001 a0002c0017t0001 a0002c0034t0001 a0002c0035t0001 a0002c0037t0001 a0002c0045t0001 a0002c0064t0001 a0002c0079t0001 a0002c0092t0001 a0002c0114t0001 a0002c0120t0001 a0002c0122t0001 a0002c0131t0001 a0003c0013t0001 a0004c0016t0002 a0004c0040t0002 a0004c0076t0002 a0005c0027t0001 a0005c0056t0001 a0005c0057t0001 a0005c0062t0001 a0006c0019t0001 a0006c0117t0001 a0006c0118t0001 a0007c0010t0001 a0007c0077t0001 a0008c0023t0002 a0011c0025t0002 a0012c0078t0001 a0012c0119t0001 a0017c0060t0001 a0019c0143t0001 a0020c0054t0001 a0022c0135t0001 a0023c0068t0001 a0026c0100t0001 a0027c0073t0002 a0028c0137t0001 a0038c0111t0001 a0043c0123t0001 a0046c0091t0001	a0001c0001t0001g0155 a0001c0002t0001g0143 a0001c0004t0001g0098 others(70): Show a0001c0001t0001g0155 a0001c0002t0001g0143 a0001c0004t0001g0098 a0001c0006t0001g0101 a0001c0014t0001g0196 a0001c0015t0001g0120 a0001c0021t0002g0076 a0001c0021t0002g0077 a0001c0039t0001g0038 a0001c0039t0001g0039 a0001c0082t0001g0117 a0001c0084t0002g0252 a0001c0126t0001g0035 a0002c0005t0001g0082 a0002c0005t0001g0178 a0002c0005t0001g0179 a0002c0005t0001g0191 a0002c0005t0001g0235 a0002c0005t0001g0241 a0002c0007t0001g0173 a0002c0007t0001g0226 a0002c0008t0001g0111 a0002c0009t0001g0110 a0002c0009t0001g0112 a0002c0009t0001g0131 a0002c0011t0001g0165 a0002c0011t0001g0210 a0002c0017t0001g0085 a0002c0017t0001g0182 a0002c0017t0001g0225 a0002c0034t0001g0185 a0002c0035t0001g0015 a0002c0037t0001g0161 a0002c0045t0001g0103 a0002c0045t0001g0150 a0002c0064t0001g0139 a0002c0079t0001g0233 a0002c0092t0001g0199 a0002c0114t0001g0209 a0002c0120t0001g0213 a0002c0122t0001g0228 a0002c0131t0001g0167 a0003c0013t0001g0122 a0004c0016t0002g0092 a0004c0040t0002g0237 a0004c0076t0002g0239 a0005c0027t0001g0063 a0005c0027t0001g0146 a0005c0056t0001g0193 a0005c0057t0001g0181 a0005c0062t0001g0142 a0006c0019t0001g0018 a0006c0117t0001g0079 a0006c0118t0001g0151 a0007c0010t0001g0071 a0007c0010t0001g0223 a0007c0010t0001g0224 a0007c0077t0001g0019 a0008c0023t0002g0054 a0011c0025t0002g0033 a0012c0078t0001g0154 a0012c0119t0001g0116 a0017c0060t0001g0149 a0019c0143t0001g0216 a0020c0054t0001g0088 a0022c0135t0001g0017 a0023c0068t0001g0219 a0026c0100t0001g0078 a0027c0073t0002g0069 a0028c0137t0001g0053 a0038c0111t0001g0060 a0043c0123t0001g0214 a0046c0091t0001g0156	73	256	0.2852	-6	c.643 others(23): Show c.6438+711_6439-707delAAAAAA	STAB2	ENSG00000136011.15	transcript	ENST00000388887.7	protein_coding	59/68		INFO_REALIGN_3_PRIME	chr12	TogoVar
STAC3_chr12_57238458_57256187	57250810	ACCCCAC ACCCCAC	A A	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02615.hp1 HG02717.hp1 others(3): Show HG01891.hp1 HG02615.hp1 HG02717.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0065 a0001c0003t0001g0208 a0001c0003t0001g0209 others(2): Show a0001c0003t0001g0065 a0001c0003t0001g0208 a0001c0003t0001g0209 a0001c0003t0001g0210 a0001c0003t0001g0211	6	430	0.0140	-6	c.-2+ others(19): Show c.-2+177_-2+182delGTGGGG	STAC3	ENSG00000185482.8	transcript	ENST00000332782.7	protein_coding	1/11			chr12	TogoVar
STAC_chr3_36375504_36553007	36390451	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02622.hp2 HG02647.hp1 others(7): Show HG02451.hp1 HG02622.hp2 HG02647.hp1 HG02723.hp1 HG02976.hp2 HG03098.hp1 HG03195.hp1 HG03453.hp2 HG03540.hp1 HG03579.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0003 a0003c0004 others(1): Show a0001c0001 a0002c0003 a0003c0004 a0004c0011	a0001c0001t0004 a0002c0003t0001 a0002c0003t0010 others(2): Show a0001c0001t0004 a0002c0003t0001 a0002c0003t0010 a0003c0004t0001 a0004c0011t0002	a0001c0001t0004g0237 a0002c0003t0001g0238 a0002c0003t0001g0241 others(7): Show a0001c0001t0004g0237 a0002c0003t0001g0238 a0002c0003t0001g0241 a0002c0003t0001g0242 a0002c0003t0001g0243 a0002c0003t0001g0244 a0002c0003t0001g0245 a0002c0003t0010g0239 a0003c0004t0001g0246 a0004c0011t0002g0240	10	316	0.0317	-6	c.111 others(23): Show c.111+9713_111+9718delTTTTTT	STAC	ENSG00000144681.11	transcript	ENST00000273183.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr3	TogoVar
STAC_chr3_36375504_36553007	36442739	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG01074.hp2 HG01167.hp1 others(22): Show HG00423.hp2 HG01074.hp2 HG01167.hp1 HG01361.hp2 HG01943.hp2 HG02027.hp1 HG02040.hp1 HG03209.hp2 HG03540.hp2 HG03831.hp1 HG04184.hp1 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18957.hp1 NA18960.hp1 NA18961.hp1 NA18974.hp1 NA18982.hp1 NA18985.hp2 NA19010.hp1 NA19055.hp2 NA19057.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0016 a0001c0001t0020 a0001c0002t0003 a0001c0002t0005	a0001c0001t0001g0074 a0001c0001t0001g0094 a0001c0001t0001g0149 others(22): Show a0001c0001t0001g0074 a0001c0001t0001g0094 a0001c0001t0001g0149 a0001c0001t0001g0156 a0001c0001t0001g0193 a0001c0001t0001g0202 a0001c0001t0001g0271 a0001c0001t0002g0079 a0001c0001t0002g0112 a0001c0001t0002g0136 a0001c0001t0002g0142 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0162 a0001c0001t0002g0167 a0001c0001t0002g0172 a0001c0001t0002g0256 a0001c0001t0004g0127 a0001c0001t0016g0132 a0001c0001t0020g0176 a0001c0002t0003g0010 a0001c0002t0003g0033 a0001c0002t0003g0034 a0001c0002t0003g0052 a0001c0002t0005g0007	25	316	0.0791	-6	c.112 others(21): Show c.112-567_112-562delCACACA	STAC	ENSG00000144681.11	transcript	ENST00000273183.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr3	TogoVar
STAC_chr3_36375504_36553007	36447649	CCACACA CCACACA	C C	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG03041.hp1 HG03209.hp1 others(1): Show HG02738.hp2 HG03041.hp1 HG03209.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 others(1): Show a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0308	4	316	0.0127	-6	c.388 others(23): Show c.388+4040_388+4045delCACACA	STAC	ENSG00000144681.11	transcript	ENST00000273183.8	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr3	TogoVar
STAC_chr3_36375504_36553007	36448369	GTGCCAC GTGCCAC	G G	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01074.hp1 HG01175.hp1 others(18): Show HG00735.hp2 HG01074.hp1 HG01175.hp1 HG01175.hp2 HG01515.hp1 HG01884.hp2 HG01934.hp1 HG02004.hp2 HG02148.hp2 HG02258.hp1 HG02258.hp2 HG02622.hp1 HG02896.hp2 HG02897.hp1 HG03139.hp1 HG03225.hp1 HG04199.hp1 NA19043.hp1 NA19043.hp2 NA19087.hp1 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0010 a0003c0004 a0001c0001 a0001c0010 a0003c0004	a0001c0001t0001 a0001c0010t0001 a0003c0004t0001 a0001c0001t0001 a0001c0010t0001 a0003c0004t0001	a0001c0001t0001g0068 a0001c0001t0001g0085 a0001c0001t0001g0086 others(18): Show a0001c0001t0001g0068 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0101 a0001c0001t0001g0106 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0187 a0001c0001t0001g0192 a0001c0001t0001g0197 a0001c0001t0001g0200 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0216 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0251 a0001c0010t0001g0102 a0003c0004t0001g0100	21	316	0.0665	-6	c.388 others(23): Show c.388+4732_388+4737delCCACTG	STAC	ENSG00000144681.11	transcript	ENST00000273183.8	protein_coding	2/10		INFO_REALIGN_3_PRIME	chr3	TogoVar
STAC_chr3_36375504_36553007	36492031	AATATAT AATATAT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG02015.hp1 HG02129.hp2 others(8): Show HG00609.hp2 HG02015.hp1 HG02129.hp2 HG02257.hp2 NA18945.hp2 NA18956.hp2 NA18965.hp1 NA18967.hp2 NA19003.hp2 NA19067.hp1 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0015 a0001c0001t0001 a0001c0001t0015	a0001c0001t0001g0232 a0001c0001t0001g0269 a0001c0001t0001g0274 others(8): Show a0001c0001t0001g0232 a0001c0001t0001g0269 a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0286 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0299 a0001c0001t0015g0081	11	316	0.0348	-6	c.688 others(23): Show c.688-1089_688-1084delATATAT	STAC	ENSG00000144681.11	transcript	ENST00000273183.8	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr3	TogoVar
STAC_chr3_36375504_36553007	36493485	CATATAT CATATAT	C C	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02109.hp1 HG02602.hp2 others(1): Show HG02074.hp2 HG02109.hp1 HG02602.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0003 a0001c0001t0001 a0001c0001t0002 a0001c0002t0003	a0001c0001t0001g0091 a0001c0001t0001g0139 a0001c0001t0002g0305 others(1): Show a0001c0001t0001g0091 a0001c0001t0001g0139 a0001c0001t0002g0305 a0001c0002t0003g0050	4	316	0.0127	-6	c.766 others(21): Show c.766+266_766+271delTATATA	STAC	ENSG00000144681.11	transcript	ENST00000273183.8	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr3	TogoVar
STAC_chr3_36375504_36553007	36533475	GTTTTTT GTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00609.hp1 others(61): Show HG00438.hp1 HG00438.hp2 HG00609.hp1 HG00621.hp2 HG01361.hp1 HG01433.hp2 HG01496.hp2 HG01943.hp1 HG01981.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02109.hp2 HG02129.hp1 HG02572.hp2 HG02647.hp1 HG02717.hp1 HG02809.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp2 HG02976.hp1 HG03017.hp1 HG03139.hp2 HG03195.hp2 HG03239.hp1 HG03453.hp1 HG03540.hp2 HG03704.hp2 HG03927.hp1 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG06807.hp2 NA18522.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18943.hp1 NA18945.hp1 NA18946.hp2 NA18949.hp1 NA18956.hp1 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18966.hp2 NA18974.hp1 NA18982.hp1 NA18983.hp2 NA18985.hp2 NA18995.hp2 NA19010.hp1 NA19030.hp2 NA19054.hp1 NA19060.hp1 NA19065.hp1 NA19066.hp2 NA19070.hp2 NA19077.hp1 NA19082.hp1 NA20129.hp1 NA20905.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0011 a0001c0001 a0001c0002 a0004c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0012 a0001c0001t0016 a0001c0001t0020 a0001c0002t0005 a0004c0011t0002	a0001c0001t0001g0060 a0001c0001t0001g0116 a0001c0001t0001g0177 others(61): Show a0001c0001t0001g0060 a0001c0001t0001g0116 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0182 a0001c0001t0001g0249 a0001c0001t0002g0064 a0001c0001t0002g0076 a0001c0001t0002g0079 a0001c0001t0002g0093 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0112 a0001c0001t0002g0121 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0128 a0001c0001t0002g0130 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0142 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0167 a0001c0001t0002g0170 a0001c0001t0002g0172 a0001c0001t0002g0188 a0001c0001t0002g0191 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0204 a0001c0001t0002g0214 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0002g0230 a0001c0001t0002g0235 a0001c0001t0002g0252 a0001c0001t0002g0254 a0001c0001t0002g0256 a0001c0001t0002g0261 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0272 a0001c0001t0002g0281 a0001c0001t0002g0302 a0001c0001t0002g0305 a0001c0001t0006g0084 a0001c0001t0012g0115 a0001c0001t0016g0132 a0001c0001t0020g0176 a0001c0002t0005g0007 a0001c0002t0005g0020 a0001c0002t0005g0037 a0001c0002t0005g0044 a0001c0002t0005g0045 a0001c0002t0005g0046 a0004c0011t0002g0240	64	316	0.2025	-6	c.111 others(25): Show c.1110+4512_1110+4517delTTTTTT	STAC	ENSG00000144681.11	transcript	ENST00000273183.8	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr3	TogoVar
STAG1_chr3_136331236_136757378	136396520	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00621.hp2 HG00733.hp2 others(14): Show HG00099.hp1 HG00621.hp2 HG00733.hp2 HG01070.hp2 HG01081.hp2 HG01106.hp2 HG01256.hp1 HG02080.hp2 HG02615.hp1 HG02683.hp2 HG02723.hp2 HG03017.hp2 NA18747.hp1 NA18954.hp2 NA18963.hp1 NA18964.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0017 a0001c0005t0001 a0001c0001t0001 a0001c0001t0017 a0001c0005t0001	a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0024 others(14): Show a0001c0001t0001g0003 a0001c0001t0001g0014 a0001c0001t0001g0024 a0001c0001t0001g0033 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0080 a0001c0001t0017g0042 a0001c0005t0001g0036	17	240	0.0708	-6	c.227 others(25): Show c.2277+2223_2277+2228delAAAAAA	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	22/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136418360	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00609.hp1 HG01069.hp1 others(14): Show HG00323.hp2 HG00609.hp1 HG01069.hp1 HG01071.hp1 HG01099.hp2 HG01346.hp1 HG01361.hp2 HG01884.hp1 HG02145.hp2 HG03669.hp2 HG03710.hp2 HG04199.hp1 HG06807.hp1 NA18950.hp1 NA18965.hp1 NA18986.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0018 a0001c0001t0001 a0001c0001t0006 a0001c0001t0018	a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0026 others(14): Show a0001c0001t0001g0013 a0001c0001t0001g0018 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0046 a0001c0001t0001g0062 a0001c0001t0001g0073 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0231 a0001c0001t0006g0092 a0001c0001t0018g0117	17	240	0.0708	-6	c.210 others(23): Show c.2109-394_2109-389delTTTTTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	20/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136430806	GACACAC GACACAC	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00738.hp1 HG01069.hp2 others(15): Show HG00280.hp2 HG00738.hp1 HG01069.hp2 HG01081.hp1 HG01099.hp1 HG01109.hp2 HG01346.hp2 HG02300.hp2 HG02451.hp1 HG02559.hp2 HG02615.hp1 HG02683.hp1 HG03017.hp1 HG03834.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0007	a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 a0002c0003t0002 a0002c0007t0002	a0001c0001t0001g0061 a0001c0001t0004g0122 a0001c0002t0002g0160 others(15): Show a0001c0001t0001g0061 a0001c0001t0004g0122 a0001c0002t0002g0160 a0001c0002t0002g0161 a0001c0002t0002g0162 a0001c0002t0002g0163 a0001c0002t0002g0164 a0001c0002t0002g0165 a0001c0002t0002g0168 a0001c0002t0002g0169 a0001c0002t0002g0171 a0001c0002t0002g0173 a0001c0002t0002g0195 a0001c0002t0002g0196 a0002c0003t0002g0144 a0002c0003t0002g0155 a0002c0003t0002g0156 a0002c0007t0002g0129	18	240	0.0750	-6	c.165 others(25): Show c.1650+2744_1650+2749delGTGTGT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	16/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136439389	GACACAC GACACAC	G G	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02074.hp2 HG03239.hp2 others(2): Show HG01175.hp2 HG02074.hp2 HG03239.hp2 HG04199.hp1 NA18954.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0002t0002 a0001c0001t0001 a0001c0001t0004 a0001c0002t0002	a0001c0001t0001g0060 a0001c0001t0001g0066 a0001c0001t0001g0078 others(2): Show a0001c0001t0001g0060 a0001c0001t0001g0066 a0001c0001t0001g0078 a0001c0001t0004g0116 a0001c0002t0002g0136	5	240	0.0208	-6	c.154 others(25): Show c.1546+3892_1546+3897delGTGTGT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	15/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136439437	CACACAA CACACAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00738.hp1 HG01081.hp1 others(6): Show HG00280.hp2 HG00738.hp1 HG01081.hp1 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG02300.hp2 HG02559.hp2 HG03942.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0002c0007 a0001c0002 a0002c0003 a0002c0007	a0001c0002t0002 a0002c0003t0002 a0002c0007t0002 a0001c0002t0002 a0002c0003t0002 a0002c0007t0002	a0001c0002t0002g0165 a0001c0002t0002g0167 a0001c0002t0002g0169 others(6): Show a0001c0002t0002g0165 a0001c0002t0002g0167 a0001c0002t0002g0169 a0001c0002t0002g0170 a0001c0002t0002g0171 a0001c0002t0002g0194 a0002c0003t0002g0155 a0002c0003t0002g0156 a0002c0007t0002g0129	9	240	0.0375	-6	c.154 others(25): Show c.1546+3844_1546+3849delTTGTGT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	15/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136551208	TGAGAGA TGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp1 HG00597.hp2 others(19): Show HG00099.hp1 HG00323.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01106.hp2 HG01361.hp1 HG02074.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp2 HG03139.hp2 HG03834.hp2 HG04115.hp2 HG06807.hp1 NA18964.hp1 NA18973.hp1 NA18986.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006	a0001c0001t0001g0025 a0001c0001t0001g0035 a0001c0001t0001g0038 others(19): Show a0001c0001t0001g0025 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0049 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0072 a0001c0001t0002g0089 a0001c0001t0002g0124 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0207 a0001c0001t0003g0214 a0001c0001t0003g0219 a0001c0001t0003g0224 a0001c0001t0003g0228 a0001c0001t0004g0103 a0001c0001t0006g0092	22	240	0.0917	-6	c.395 others(23): Show c.395-9019_395-9014delTCTCTC	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	5/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136600870	GTTTTGT GTTTTGT	G G	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp1 HG02818.hp2 HG01167.hp2 HG01169.hp1 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0090	3	240	0.0125	-6	c.297 others(23): Show c.297+3433_297+3438delACAAAA	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	4/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136666074	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00597.hp2 HG00642.hp2 others(21): Show HG00099.hp2 HG00597.hp2 HG00642.hp2 HG01175.hp2 HG01361.hp1 HG02055.hp1 HG02109.hp2 HG02280.hp1 HG02486.hp2 HG02523.hp2 HG02818.hp2 HG03490.hp1 HG03491.hp1 HG03579.hp1 HG03579.hp2 HG03927.hp2 HG04184.hp1 NA18747.hp2 NA18945.hp2 NA18964.hp2 NA18971.hp1 NA18989.hp2 NA19005.hp2 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0008 a0001c0001 a0001c0002 a0001c0008	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0002t0002 a0001c0002t0005 a0001c0002t0009 a0001c0008t0003	a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0003g0202 others(21): Show a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0003g0202 a0001c0001t0003g0203 a0001c0001t0003g0212 a0001c0001t0003g0214 a0001c0001t0003g0219 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0228 a0001c0001t0003g0234 a0001c0001t0004g0016 a0001c0001t0004g0101 a0001c0001t0004g0106 a0001c0001t0004g0108 a0001c0001t0004g0115 a0001c0001t0004g0116 a0001c0001t0004g0127 a0001c0001t0006g0091 a0001c0001t0006g0096 a0001c0002t0002g0173 a0001c0002t0005g0189 a0001c0002t0009g0001 a0001c0008t0003g0227	24	240	0.1000	-6	c.-83 others(25): Show c.-83-35099_-83-35094delTTTTTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136692313	CAAAAAA CAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00733.hp1 HG00741.hp2 others(16): Show HG00280.hp2 HG00733.hp1 HG00741.hp2 HG01069.hp2 HG01081.hp1 HG01109.hp1 HG01167.hp1 HG01346.hp2 HG02300.hp2 HG02683.hp1 HG03017.hp1 HG03239.hp1 HG03490.hp2 HG03492.hp1 HG03834.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0130 a0001c0002t0002g0159 a0001c0002t0002g0161 others(16): Show a0001c0002t0002g0130 a0001c0002t0002g0159 a0001c0002t0002g0161 a0001c0002t0002g0162 a0001c0002t0002g0163 a0001c0002t0002g0164 a0001c0002t0002g0165 a0001c0002t0002g0166 a0001c0002t0002g0167 a0001c0002t0002g0168 a0001c0002t0002g0169 a0001c0002t0002g0170 a0001c0002t0002g0171 a0001c0002t0002g0172 a0001c0002t0002g0173 a0001c0002t0002g0174 a0001c0002t0002g0194 a0001c0002t0002g0195 a0001c0002t0002g0196	19	240	0.0792	-6	c.-84 others(25): Show c.-84+59876_-84+59881delTTTTTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136702075	AAGAGAG AAGAGAG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00609.hp2 HG00621.hp1 others(17): Show HG00099.hp2 HG00609.hp2 HG00621.hp1 HG00733.hp2 HG01256.hp2 HG01496.hp2 HG02015.hp1 HG02055.hp2 HG02109.hp2 HG02523.hp1 HG02523.hp2 HG02896.hp1 HG02965.hp2 HG03209.hp2 HG03540.hp2 HG03669.hp1 NA18747.hp2 NA18950.hp2 NA18971.hp1 NA18973.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0008t0003	a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0002g0015 others(17): Show a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0002g0015 a0001c0001t0002g0104 a0001c0001t0002g0239 a0001c0001t0003g0203 a0001c0001t0003g0204 a0001c0001t0003g0207 a0001c0001t0003g0214 a0001c0001t0003g0220 a0001c0001t0003g0229 a0001c0001t0004g0098 a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0103 a0001c0001t0004g0105 a0001c0001t0004g0107 a0001c0001t0006g0095 a0001c0001t0006g0096 a0001c0008t0003g0227	20	240	0.0833	-6	c.-84 others(25): Show c.-84+50114_-84+50119delCTCTCT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136705378	AACACAC AACACAC	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp2 HG01243.hp1 others(28): Show HG00733.hp2 HG00735.hp2 HG01243.hp1 HG01496.hp1 HG01884.hp2 HG02015.hp1 HG02015.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02615.hp2 HG02809.hp1 HG02818.hp1 HG02965.hp1 HG02970.hp1 HG03139.hp1 HG03209.hp1 HG03471.hp1 HG03516.hp2 HG03579.hp1 HG06807.hp1 NA18522.hp2 NA19000.hp1 NA19043.hp1 NA19043.hp2 NA19240.hp2 NA20129.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010 a0001c0001t0016 a0001c0002t0002 a0001c0002t0005 a0001c0002t0007 a0001c0002t0012 a0002c0003t0002 a0002c0003t0008	a0001c0001t0001g0014 a0001c0001t0002g0008 a0001c0001t0002g0086 others(28): Show a0001c0001t0001g0014 a0001c0001t0002g0008 a0001c0001t0002g0086 a0001c0001t0002g0089 a0001c0001t0003g0204 a0001c0001t0003g0214 a0001c0001t0004g0102 a0001c0001t0004g0120 a0001c0001t0004g0121 a0001c0001t0006g0092 a0001c0001t0006g0094 a0001c0001t0006g0126 a0001c0001t0010g0010 a0001c0001t0016g0236 a0001c0002t0002g0006 a0001c0002t0002g0188 a0001c0002t0005g0189 a0001c0002t0005g0235 a0001c0002t0005g0237 a0001c0002t0007g0134 a0001c0002t0007g0135 a0001c0002t0007g0191 a0001c0002t0012g0181 a0002c0003t0002g0139 a0002c0003t0002g0140 a0002c0003t0002g0141 a0002c0003t0002g0142 a0002c0003t0002g0146 a0002c0003t0008g0012 a0002c0003t0008g0150 a0002c0003t0008g0151	31	240	0.1292	-6	c.-84 others(25): Show c.-84+46811_-84+46816delGTGTGT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136714938	AATATAT AATATAT	A A	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00609.hp2 HG01167.hp2 others(10): Show HG00597.hp2 HG00609.hp2 HG01167.hp2 HG01169.hp1 HG02280.hp1 HG02486.hp2 HG02615.hp2 HG02896.hp1 HG02965.hp2 HG03491.hp1 HG03492.hp2 NA18941.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0002c0003t0008	a0001c0001t0001g0069 a0001c0001t0002g0087 a0001c0001t0002g0088 others(10): Show a0001c0001t0001g0069 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0003g0200 a0001c0001t0003g0207 a0001c0001t0003g0228 a0001c0001t0004g0105 a0001c0001t0004g0107 a0001c0001t0004g0108 a0001c0001t0004g0113 a0001c0001t0004g0127 a0002c0003t0008g0012	13	240	0.0542	-6	c.-84 others(25): Show c.-84+37251_-84+37256delATATAT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136722609	ACTCTCC ACTCTCC	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01167.hp2 HG01169.hp1 others(8): Show HG00735.hp2 HG01167.hp2 HG01169.hp1 HG01496.hp1 HG02809.hp1 HG03041.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03927.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0002c0003	a0001c0001t0002 a0001c0002t0005 a0001c0002t0007 others(3): Show a0001c0001t0002 a0001c0002t0005 a0001c0002t0007 a0001c0002t0014 a0001c0006t0005 a0002c0003t0008	a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0104 others(8): Show a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0104 a0001c0002t0005g0235 a0001c0002t0007g0134 a0001c0002t0007g0135 a0001c0002t0007g0190 a0001c0002t0007g0191 a0001c0002t0014g0193 a0001c0006t0005g0178 a0002c0003t0008g0151	11	240	0.0458	-6	c.-84 others(25): Show c.-84+29580_-84+29585delGGAGAG	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136745025	CATAAAG CATAAAG	C C	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02723.hp1 NA18906.hp1 HG01433.hp1 HG02723.hp1 NA18906.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0132 a0001c0002t0002g0133 a0001c0002t0002g0157 a0001c0002t0002g0132 a0001c0002t0002g0133 a0001c0002t0002g0157	3	240	0.0125	-6	c.-84 others(23): Show c.-84+7164_-84+7169delCTTTAT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136748599	TCGGCCA TCGGCCA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(131): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00323.hp2 HG00544.hp1 HG00639.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01517.hp1 HG01884.hp2 HG02015.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp2 HG02683.hp1 HG02723.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18954.hp1 NA18973.hp1 NA18984.hp2 NA19000.hp1 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(3): Show a0001c0001 a0001c0002 a0001c0006 a0002c0003 a0002c0004 a0002c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0002t0002 a0001c0002t0005 a0001c0002t0007 a0001c0002t0009 a0001c0002t0012 a0001c0002t0014 a0001c0006t0005 a0002c0003t0002 a0002c0003t0008 a0002c0003t0011 a0002c0004t0002 a0002c0007t0002	a0001c0001t0001g0114 a0001c0001t0002g0007 a0001c0001t0002g0008 others(131): Show a0001c0001t0001g0114 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0015 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0104 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0158 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0239 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0004g0016 a0001c0001t0004g0097 a0001c0001t0004g0098 a0001c0001t0004g0099 a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0103 a0001c0001t0004g0105 a0001c0001t0004g0106 a0001c0001t0004g0107 a0001c0001t0004g0108 a0001c0001t0004g0111 a0001c0001t0004g0113 a0001c0001t0004g0115 a0001c0001t0004g0116 a0001c0001t0004g0118 a0001c0001t0004g0119 a0001c0001t0004g0120 a0001c0001t0004g0121 a0001c0001t0004g0122 a0001c0001t0004g0127 a0001c0001t0006g0091 a0001c0001t0006g0092 a0001c0001t0006g0093 a0001c0001t0006g0094 a0001c0001t0006g0095 a0001c0001t0006g0096 a0001c0001t0006g0126 a0001c0001t0010g0010 a0001c0001t0016g0236 a0001c0001t0018g0117 a0001c0001t0019g0109 a0001c0002t0002g0004 a0001c0002t0002g0005 a0001c0002t0002g0006 a0001c0002t0002g0110 a0001c0002t0002g0112 a0001c0002t0002g0128 a0001c0002t0002g0130 a0001c0002t0002g0132 a0001c0002t0002g0133 a0001c0002t0002g0136 a0001c0002t0002g0137 a0001c0002t0002g0138 a0001c0002t0002g0157 a0001c0002t0002g0159 a0001c0002t0002g0160 a0001c0002t0002g0161 a0001c0002t0002g0162 a0001c0002t0002g0163 a0001c0002t0002g0164 a0001c0002t0002g0165 a0001c0002t0002g0166 a0001c0002t0002g0167 a0001c0002t0002g0168 a0001c0002t0002g0169 a0001c0002t0002g0170 a0001c0002t0002g0171 a0001c0002t0002g0172 a0001c0002t0002g0173 a0001c0002t0002g0174 a0001c0002t0002g0187 a0001c0002t0002g0188 a0001c0002t0002g0192 a0001c0002t0002g0194 a0001c0002t0002g0195 a0001c0002t0002g0196 a0001c0002t0005g0131 a0001c0002t0005g0175 a0001c0002t0005g0176 a0001c0002t0005g0177 a0001c0002t0005g0179 a0001c0002t0005g0180 a0001c0002t0005g0182 a0001c0002t0005g0183 a0001c0002t0005g0184 a0001c0002t0005g0185 a0001c0002t0005g0186 a0001c0002t0005g0189 a0001c0002t0005g0235 a0001c0002t0005g0237 a0001c0002t0007g0134 a0001c0002t0007g0135 a0001c0002t0007g0190 a0001c0002t0007g0191 a0001c0002t0009g0001 a0001c0002t0009g0002 a0001c0002t0012g0181 a0001c0002t0014g0193 a0001c0006t0005g0178 a0002c0003t0002g0139 a0002c0003t0002g0140 a0002c0003t0002g0141 a0002c0003t0002g0142 a0002c0003t0002g0143 a0002c0003t0002g0144 a0002c0003t0002g0145 a0002c0003t0002g0146 a0002c0003t0002g0147 a0002c0003t0002g0148 a0002c0003t0002g0149 a0002c0003t0002g0152 a0002c0003t0002g0154 a0002c0003t0002g0155 a0002c0003t0002g0156 a0002c0003t0008g0012 a0002c0003t0008g0150 a0002c0003t0008g0151 a0002c0003t0011g0153 a0002c0004t0002g0238 a0002c0007t0002g0129	134	240	0.5583	-6	c.-84 others(23): Show c.-84+3590_-84+3595delTGGCCG	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG2_chrX_123956706_124107656	123964960	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG02273.hp2 NA20300.hp1 HG01346.hp1 HG02273.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0009 a0001c0001t0006g0010 a0001c0001t0006g0058 a0001c0001t0006g0009 a0001c0001t0006g0010 a0001c0001t0006g0058	3	276	0.0109	-6	c.-16 others(25): Show c.-163+3117_-163+3122delTTTTTT	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	1/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	123967256	ATTTTTT ATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	276	0.0036	-6	c.-16 others(25): Show c.-163+5421_-163+5426delTTTTTT	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	1/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	123974577	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0260 a0001c0001t0001g0260	1	276	0.0036	-6	c.-16 others(27): Show c.-163+12735_-163+12740delTTTTTT	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	1/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	123976293	ATGAAAT ATGAAAT	A A	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0029	1	276	0.0036	-6	c.-16 others(27): Show c.-163+14439_-163+14444delGAAATT	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	1/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	123983974	CTTTTTT CTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show HG00140.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00735.hp2 HG01257.hp2 HG01346.hp1 HG01515.hp1 HG01517.hp2 HG01993.hp1 HG02056.hp1 HG02080.hp2 HG02132.hp1 HG02148.hp2 HG02273.hp2 HG02451.hp1 HG02622.hp1 HG02630.hp1 HG03209.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03540.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03942.hp1 HG04115.hp1 NA18944.hp1 NA18952.hp1 NA18960.hp1 NA18969.hp1 NA18975.hp2 NA18979.hp1 NA18983.hp1 NA18990.hp1 NA19000.hp1 NA19011.hp2 NA19064.hp2 NA19077.hp1 NA19082.hp1 NA19083.hp1 NA19087.hp2 NA19090.hp1 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006	a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 others(45): Show a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0043 a0001c0001t0001g0071 a0001c0001t0002g0011 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0057 a0001c0001t0002g0070 a0001c0001t0002g0185 a0001c0001t0002g0259 a0001c0001t0005g0019 a0001c0001t0005g0027 a0001c0001t0005g0034 a0001c0001t0006g0009 a0001c0001t0006g0010 a0001c0001t0006g0058	48	276	0.1739	-6	c.-16 others(27): Show c.-163+22134_-163+22139delTTTTTT	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	1/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	123987043	AGTGCAG AGTGCAG	A A	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0072 a0001c0001t0001g0072	1	276	0.0036	-6	c.-16 others(27): Show c.-163+25188_-163+25193delGTGCAG	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	1/34			chrX	TogoVar
STAG2_chrX_123956706_124107656	124005001	CTTAAGT CTTAAGT	C C	intron_variant intron_variant	MODIFIER	NA18981.hp2 NA18988.hp1 NA18989.hp1 others(2): Show NA18981.hp2 NA18988.hp1 NA18989.hp1 NA19011.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0221 a0001c0001t0001g0233 a0001c0001t0001g0234 others(2): Show a0001c0001t0001g0221 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0251 a0001c0001t0001g0263	5	276	0.0181	-6	c.-16 others(27): Show c.-162-16362_-162-16357delAGTTTA	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	1/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	124026128	AAATAAT AAATAAT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02071.hp1 HG02559.hp2 others(10): Show HG01106.hp1 HG02071.hp1 HG02559.hp2 HG03017.hp1 HG03831.hp1 HG04204.hp1 NA18988.hp1 NA18989.hp1 NA18991.hp2 NA19058.hp1 NA19063.hp1 NA19081.hp2 NA19091.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0001 a0004c0006t0001 a0001c0001t0001 a0004c0006t0001	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0053 others(10): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0053 a0001c0001t0001g0202 a0001c0001t0001g0221 a0001c0001t0001g0234 a0001c0001t0001g0252 a0001c0001t0001g0257 a0001c0001t0001g0263 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0004c0006t0001g0226	13	276	0.0471	-6	c.123 others(21): Show c.123+248_123+253delATAATA	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	4/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	124028794	TTATATA TTATATA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00621.hp1 HG00639.hp1 others(176): Show HG00558.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01175.hp1 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01517.hp1 HG01884.hp1 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG03017.hp1 HG03130.hp1 HG03195.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp2 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03704.hp1 HG03831.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp1 NA18995.hp1 NA18999.hp1 NA18999.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19012.hp1 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20752.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0003 a0001c0007 others(3): Show a0001c0001 a0001c0003 a0001c0007 a0002c0005 a0003c0004 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0003t0001 a0001c0007t0001 a0002c0005t0007 a0003c0004t0001 a0004c0006t0001	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 others(176): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0163 a0001c0001t0001g0170 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0002g0136 a0001c0001t0002g0144 a0001c0001t0002g0151 a0001c0001t0002g0193 a0001c0001t0002g0198 a0001c0001t0002g0222 a0001c0001t0002g0271 a0001c0001t0003g0106 a0001c0001t0003g0208 a0001c0001t0003g0210 a0001c0001t0003g0216 a0001c0001t0003g0244 a0001c0001t0007g0141 a0001c0001t0009g0139 a0001c0001t0010g0164 a0001c0003t0001g0078 a0001c0007t0001g0165 a0002c0005t0007g0083 a0003c0004t0001g0255 a0004c0006t0001g0226	179	276	0.6486	-6	c.124 others(23): Show c.124-2143_124-2138delATATAT	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	4/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	124028818	ATATATT ATATATT	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01433.hp1 NA20905.hp1 HG01099.hp1 HG01433.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0107 a0001c0001t0001g0127 a0001c0001t0001g0161 a0001c0001t0001g0107 a0001c0001t0001g0127 a0001c0001t0001g0161	3	276	0.0109	-6	c.124 others(23): Show c.124-2141_124-2136delATATTT	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	4/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAG2_chrX_123956706_124107656	124034875	GTTGTTA GTTGTTA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show HG00140.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp1 HG00735.hp2 HG01257.hp2 HG01346.hp1 HG01515.hp1 HG01517.hp2 HG01952.hp1 HG01993.hp1 HG02056.hp1 HG02080.hp2 HG02132.hp1 HG02148.hp2 HG02273.hp2 HG02280.hp2 HG02647.hp1 HG02809.hp1 HG02896.hp2 HG02897.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03942.hp1 HG04115.hp1 NA18522.hp1 NA18944.hp1 NA18952.hp1 NA18960.hp1 NA18969.hp1 NA18975.hp2 NA18979.hp1 NA18983.hp1 NA18990.hp1 NA19000.hp1 NA19011.hp2 NA19064.hp2 NA19077.hp1 NA19082.hp1 NA19083.hp1 NA19087.hp2 NA19090.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006	a0001c0001t0001g0043 a0001c0001t0001g0166 a0001c0001t0001g0167 others(46): Show a0001c0001t0001g0043 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0002g0011 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0057 a0001c0001t0002g0070 a0001c0001t0002g0185 a0001c0001t0002g0259 a0001c0001t0005g0019 a0001c0001t0005g0027 a0001c0001t0005g0034 a0001c0001t0006g0009 a0001c0001t0006g0010 a0001c0001t0006g0058	49	276	0.1775	-6	c.289 others(23): Show c.289-2649_289-2644delGTTATT	STAG2	ENSG00000101972.20	transcript	ENST00000371145.8	protein_coding	5/34		INFO_REALIGN_3_PRIME	chrX	TogoVar
STAM2_chr2_152111801_152180763	152114170	CAAAAAA CAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00408.hp2 HG00639.hp1 others(42): Show HG00099.hp1 HG00408.hp2 HG00639.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01258.hp1 HG01361.hp1 HG01496.hp1 HG01928.hp1 HG01943.hp1 HG01975.hp1 HG01978.hp1 HG01981.hp2 HG02040.hp1 HG02056.hp2 HG02148.hp2 HG02293.hp1 HG02572.hp1 HG02647.hp2 HG02717.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG03041.hp1 HG03041.hp2 HG03669.hp2 HG03834.hp2 HG03927.hp1 NA18522.hp2 NA18956.hp1 NA18963.hp1 NA18966.hp2 NA18969.hp1 NA18983.hp1 NA19005.hp1 NA19006.hp2 NA19065.hp2 NA19079.hp2 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 others(9): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0012 a0001c0001t0017 a0001c0001t0022 a0001c0001t0023 a0001c0001t0034 a0001c0001t0038 a0001c0001t0048 a0001c0001t0053 a0001c0001t0054 a0001c0001t0056	a0001c0001t0003g0203 a0001c0001t0003g0219 a0001c0001t0003g0220 others(37): Show a0001c0001t0003g0203 a0001c0001t0003g0219 a0001c0001t0003g0220 a0001c0001t0004g0004 a0001c0001t0004g0014 a0001c0001t0004g0015 a0001c0001t0004g0016 a0001c0001t0004g0193 a0001c0001t0004g0195 a0001c0001t0004g0206 a0001c0001t0004g0208 a0001c0001t0004g0213 a0001c0001t0004g0214 a0001c0001t0004g0215 a0001c0001t0004g0217 a0001c0001t0004g0253 a0001c0001t0012g0161 a0001c0001t0012g0162 a0001c0001t0012g0165 a0001c0001t0012g0166 a0001c0001t0012g0167 a0001c0001t0012g0168 a0001c0001t0012g0169 a0001c0001t0017g0198 a0001c0001t0017g0204 a0001c0001t0017g0218 a0001c0001t0017g0221 a0001c0001t0017g0222 a0001c0001t0022g0194 a0001c0001t0022g0207 a0001c0001t0022g0210 a0001c0001t0023g0192 a0001c0001t0023g0196 a0001c0001t0023g0216 a0001c0001t0034g0200 a0001c0001t0038g0211 a0001c0001t0048g0201 a0001c0001t0053g0097 a0001c0001t0054g0098 a0001c0001t0056g0154	45	360	0.1250	-6	c.63 others(17): Show c.6398_*6403delTTTTTT	STAM2	ENSG00000115145.10	transcript	ENST00000263904.5	protein_coding		2630		chr2	TogoVar
STAM2_chr2_152111801_152180763	152122074	ATATGTG ATATGTG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00408.hp2 HG00423.hp2 others(82): Show HG00099.hp1 HG00408.hp2 HG00423.hp2 HG00558.hp1 HG00609.hp1 HG00621.hp2 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01109.hp2 HG01243.hp1 HG01256.hp2 HG01258.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01517.hp1 HG01928.hp1 HG01943.hp1 HG01975.hp1 HG01978.hp1 HG01981.hp2 HG02015.hp1 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02293.hp1 HG02559.hp2 HG02630.hp2 HG02683.hp2 HG02896.hp1 HG02897.hp1 HG03239.hp1 HG03453.hp2 HG03579.hp2 HG03669.hp2 HG03704.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 NA18943.hp1 NA18948.hp2 NA18950.hp2 NA18952.hp1 NA18956.hp1 NA18963.hp1 NA18966.hp2 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18972.hp1 NA18973.hp1 NA18974.hp2 NA18981.hp1 NA18983.hp1 NA18992.hp2 NA18998.hp2 NA19005.hp1 NA19006.hp2 NA19007.hp1 NA19009.hp1 NA19065.hp2 NA19078.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0001c0001t0004 a0001c0001t0014 others(13): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0014 a0001c0001t0017 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0034 a0001c0001t0038 a0001c0001t0039 a0001c0001t0046 a0001c0001t0048 a0001c0001t0049 a0001c0001t0059 a0002c0003t0003	a0001c0001t0003g0017 a0001c0001t0003g0179 a0001c0001t0003g0180 others(76): Show a0001c0001t0003g0017 a0001c0001t0003g0179 a0001c0001t0003g0180 a0001c0001t0003g0181 a0001c0001t0003g0183 a0001c0001t0003g0184 a0001c0001t0003g0185 a0001c0001t0003g0190 a0001c0001t0003g0202 a0001c0001t0003g0203 a0001c0001t0003g0219 a0001c0001t0003g0220 a0001c0001t0003g0223 a0001c0001t0003g0225 a0001c0001t0003g0228 a0001c0001t0003g0230 a0001c0001t0003g0231 a0001c0001t0003g0233 a0001c0001t0003g0236 a0001c0001t0003g0237 a0001c0001t0003g0239 a0001c0001t0003g0241 a0001c0001t0003g0244 a0001c0001t0003g0247 a0001c0001t0003g0249 a0001c0001t0003g0250 a0001c0001t0003g0251 a0001c0001t0003g0252 a0001c0001t0003g0254 a0001c0001t0003g0301 a0001c0001t0004g0004 a0001c0001t0004g0014 a0001c0001t0004g0015 a0001c0001t0004g0016 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0193 a0001c0001t0004g0195 a0001c0001t0004g0197 a0001c0001t0004g0205 a0001c0001t0004g0206 a0001c0001t0004g0208 a0001c0001t0004g0209 a0001c0001t0004g0213 a0001c0001t0004g0214 a0001c0001t0004g0215 a0001c0001t0004g0217 a0001c0001t0004g0224 a0001c0001t0004g0238 a0001c0001t0004g0242 a0001c0001t0004g0253 a0001c0001t0014g0035 a0001c0001t0017g0198 a0001c0001t0017g0204 a0001c0001t0017g0218 a0001c0001t0017g0221 a0001c0001t0017g0222 a0001c0001t0021g0232 a0001c0001t0021g0234 a0001c0001t0021g0243 a0001c0001t0022g0194 a0001c0001t0022g0207 a0001c0001t0022g0210 a0001c0001t0022g0212 a0001c0001t0023g0192 a0001c0001t0023g0196 a0001c0001t0023g0216 a0001c0001t0024g0191 a0001c0001t0024g0227 a0001c0001t0024g0235 a0001c0001t0034g0200 a0001c0001t0038g0211 a0001c0001t0039g0199 a0001c0001t0046g0246 a0001c0001t0048g0201 a0001c0001t0049g0240 a0001c0001t0059g0189 a0002c0003t0003g0229	85	360	0.2361	-6	c.135 others(25): Show c.1350-1278_1350-1273delCACATA	STAM2	ENSG00000115145.10	transcript	ENST00000263904.5	protein_coding	13/13			chr2	TogoVar
STAM2_chr2_152111801_152180763	152153885	TACACAC TACACAC	T T	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02622.hp2 HG03098.hp2 others(2): Show HG02486.hp2 HG02622.hp2 HG03098.hp2 HG03225.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0028 a0001c0001t0016g0029 a0001c0001t0016g0106 others(2): Show a0001c0001t0016g0028 a0001c0001t0016g0029 a0001c0001t0016g0106 a0001c0001t0016g0107 a0001c0001t0016g0108	5	360	0.0139	-6	c.41- others(21): Show c.41-3662_41-3657delGTGTGT	STAM2	ENSG00000115145.10	transcript	ENST00000263904.5	protein_coding	1/13			chr2	TogoVar
STAMBPL1_chr10_88875245_88928487	88882184	CCTCTAT CCTCTAT	C C	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01169.hp2 HG02071.hp2 others(14): Show HG01168.hp1 HG01169.hp2 HG02071.hp2 HG02074.hp1 HG02080.hp2 HG02132.hp1 HG03927.hp1 NA18939.hp2 NA18945.hp2 NA18950.hp1 NA18967.hp1 NA18974.hp2 NA18975.hp2 NA18978.hp2 NA18982.hp2 NA19064.hp2 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0053 a0001c0001t0001g0054 others(4): Show a0001c0001t0001g0005 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188	17	388	0.0438	-6	c.-54 others(23): Show c.-54+1550_-54+1555delTATCTC	STAMBPL1	ENSG00000138134.12	transcript	ENST00000371926.8	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
STAMBP_chr2_73823961_73872168	73833404	AAATTAT AAATTAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01361.hp1 HG02055.hp1 others(5): Show HG00735.hp2 HG01361.hp1 HG02055.hp1 HG02451.hp1 HG02895.hp2 HG02965.hp1 HG03540.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0328 a0001c0001t0008g0329 a0001c0001t0008g0330 others(5): Show a0001c0001t0008g0328 a0001c0001t0008g0329 a0001c0001t0008g0330 a0001c0001t0008g0331 a0001c0001t0008g0333 a0001c0001t0008g0334 a0001c0001t0008g0335 a0001c0001t0008g0344	8	368	0.0217	-6	c.203 others(23): Show c.203+2353_203+2358delATTATA	STAMBP	ENSG00000124356.17	transcript	ENST00000394070.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
STAMBP_chr2_73823961_73872168	73834236	AATATAT AATATAT	A A	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00738.hp1 HG01891.hp2 others(10): Show HG00621.hp2 HG00738.hp1 HG01891.hp2 HG02155.hp2 HG02922.hp2 HG02965.hp2 HG03195.hp2 HG03453.hp1 HG03654.hp2 NA18962.hp2 NA18972.hp1 NA19065.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0022 a0001c0001t0001 a0001c0001t0012 a0001c0001t0022	a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 others(10): Show a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0172 a0001c0001t0001g0202 a0001c0001t0001g0207 a0001c0001t0012g0091 a0001c0001t0022g0221	13	368	0.0353	-6	c.203 others(23): Show c.203+3223_203+3228delTATATA	STAMBP	ENSG00000124356.17	transcript	ENST00000394070.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
STAMBP_chr2_73823961_73872168	73861504	TTTTTTG TTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01361.hp1 HG02055.hp1 others(7): Show HG00735.hp2 HG01361.hp1 HG02055.hp1 HG02451.hp1 HG02615.hp1 HG02622.hp2 HG02895.hp2 HG02965.hp1 HG03540.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0027 a0001c0001t0044 a0001c0001t0008 a0001c0001t0027 a0001c0001t0044	a0001c0001t0008g0328 a0001c0001t0008g0329 a0001c0001t0008g0330 others(7): Show a0001c0001t0008g0328 a0001c0001t0008g0329 a0001c0001t0008g0330 a0001c0001t0008g0331 a0001c0001t0008g0333 a0001c0001t0008g0334 a0001c0001t0008g0335 a0001c0001t0008g0344 a0001c0001t0027g0022 a0001c0001t0044g0347	10	368	0.0272	-6	c.121 others(23): Show c.1219-671_1219-666delTTGTTT	STAMBP	ENSG00000124356.17	transcript	ENST00000394070.7	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr2	TogoVar

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