Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 10735 |
| ensemblid | ENSG00000101972.20 |
| hgncid | 11355 |
| symbol | STAG2 |
| name | STAG2 cohesin complex component |
| refseq_nuc | NM_001042750.2 |
| refseq_prot | NP_001036215.1 |
| ensembl_nuc | ENST00000371145.8 |
| ensembl_prot | ENSP00000360187.4 |
| mane_status | MANE Select |
| chr | chrX |
| start | 123961706 |
| end | 124102656 |
| strand | + |
| ver | v1.2 |
| region | chrX:123961706-124102656 |
| region5000 | chrX:123956706-124107656 |
| regionname0 | STAG2_chrX_123961706_124102656 |
| regionname5000 | STAG2_chrX_123956706_124107656 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 3804 | 270 | 66 | 43 | 122 | 7 | 30 | STAG2_chrX_123956706_124107656 | STAG2 | ATGAT others(3799): Show |
chrX | 123956706 | 124107656 | ||
| a0001c0002 | 0/0 | 3804 | 3 | 2 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | ATGAT others(3799): Show |
chrX | 123956706 | 124107656 | ||
| a0001c0003 | 0/0 | 3804 | 2 | 2 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | ATGAT others(3799): Show |
chrX | 123956706 | 124107656 | ||
| a0001c0004 | 0/0 | 3804 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | ATGAT others(3799): Show |
chrX | 123956706 | 124107656 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/1 | 6179 | 213 | 59 | 36 | 96 | 2 | 18 | STAG2_chrX_123956706_124107656 | STAG2 | CTCTC others(6174): Show |
chrX | 123956706 | 124107656 |
| a0001c0001t0002 | 0/0 | 6178 | 47 | 2 | 7 | 21 | 5 | 12 | STAG2_chrX_123956706_124107656 | STAG2 | CTCTC others(6173): Show |
chrX | 123956706 | 124107656 |
| a0001c0001t0003 | 0/0 | 6179 | 5 | 5 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | CTCTC others(6174): Show |
chrX | 123956706 | 124107656 |
| a0001c0001t0004 | 0/0 | 6178 | 3 | 0 | 0 | 3 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | CTCTC others(6173): Show |
chrX | 123956706 | 124107656 |
| a0001c0001t0005 | 0/0 | 6179 | 2 | 0 | 0 | 2 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | CTCTC others(6174): Show |
chrX | 123956706 | 124107656 |
| a0001c0002t0001 | 0/0 | 6179 | 3 | 2 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | CTCTC others(6174): Show |
chrX | 123956706 | 124107656 |
| a0001c0003t0001 | 0/0 | 6179 | 2 | 2 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | CTCTC others(6174): Show |
chrX | 123956706 | 124107656 |
| a0001c0004t0001 | 0/0 | 6179 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | CTCTC others(6174): Show |
chrX | 123956706 | 124107656 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0002 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0003 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0004 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0006 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0007 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0008 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0009 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0010 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0011 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0012 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0013 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0020 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0048 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0049 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0050 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0051 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0052 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0054 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0055 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0060 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0065 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0066 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0067 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0068 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0070 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0072 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0073 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0074 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0076 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0078 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0079 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0080 | 0/1 | 1 | 0 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0081 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0082 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0083 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0084 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0085 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0086 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0088 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0089 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0090 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0091 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0092 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0093 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0094 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0095 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0096 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0097 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0098 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0099 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0100 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0101 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0102 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0103 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0104 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0105 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0106 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0107 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0108 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0109 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0110 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0111 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0112 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0113 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0114 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0115 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0116 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0117 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0118 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0119 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0120 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0121 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0122 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0123 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0124 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0125 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0126 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0127 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0128 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0129 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0130 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0131 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0133 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0135 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0136 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0137 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0138 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0139 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0140 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0142 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0143 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0144 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0145 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0146 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0147 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0148 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0150 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0151 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0153 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0154 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0155 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0156 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0157 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0158 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0159 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0160 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0161 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0162 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0163 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0164 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0165 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0166 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0168 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0169 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0170 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0171 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0172 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0173 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0174 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0175 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0176 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0177 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0178 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0179 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0180 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0181 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0182 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0184 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0185 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0186 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0188 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0189 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0190 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0191 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0192 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0193 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0194 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0195 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0196 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0197 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0199 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0200 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0201 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0202 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0203 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0204 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0207 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0208 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0209 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0210 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0211 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0212 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0213 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0215 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0216 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0217 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0219 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0220 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0221 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0222 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0224 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0225 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0226 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0227 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0228 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0229 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0230 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0231 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0232 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0233 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0234 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0235 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0236 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0237 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0238 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0239 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0240 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0241 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0242 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0243 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0244 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0245 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0246 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0247 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0249 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0250 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0251 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0252 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0253 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0254 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0255 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0256 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0258 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0259 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0261 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0262 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0263 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0264 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0265 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0266 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0267 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0268 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0269 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0270 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0271 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0272 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0273 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0274 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0001g0275 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0005 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0014 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0015 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0016 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0017 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0018 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0019 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0021 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0023 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0024 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0026 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0027 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0028 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0029 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0030 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0031 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0033 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0034 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0037 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0038 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0039 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0041 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0042 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0043 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0047 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0056 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0057 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0059 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0071 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0132 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0141 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0152 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0183 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0187 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0214 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0218 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0223 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0257 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0002g0260 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0003g0134 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0003g0198 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0003g0205 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0003g0206 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0003g0248 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0004g0022 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0004g0032 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0004g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0005g0087 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0001t0005g0149 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0002t0001g0062 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0002t0001g0063 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0002t0001g0069 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0003t0001g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0003t0001g0075 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| a0001c0004t0001g0167 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00140 | hp1 | a0001 | c0001 | t0002 | g0014 | EUR | GBR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00280 | hp1 | a0001 | c0001 | t0002 | g0057 | EUR | FIN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00438 | hp1 | a0001 | c0001 | t0002 | g0183 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00438 | hp2 | a0001 | c0001 | t0001 | g0265 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00558 | hp1 | a0001 | c0001 | t0002 | g0071 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00558 | hp2 | a0001 | c0001 | t0001 | g0273 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00597 | hp1 | a0001 | c0001 | t0004 | g0022 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00597 | hp2 | a0001 | c0001 | t0001 | g0144 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00609 | hp1 | a0001 | c0001 | t0002 | g0036 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00621 | hp1 | a0001 | c0001 | t0001 | g0197 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00639 | hp1 | a0001 | c0001 | t0001 | g0142 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00639 | hp2 | a0001 | c0001 | t0001 | g0207 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00642 | hp1 | a0001 | c0001 | t0001 | g0078 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0157 | EAS | CHS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00735 | hp1 | a0001 | c0001 | t0001 | g0162 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00735 | hp2 | a0001 | c0001 | t0002 | g0023 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0128 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0147 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01074 | hp1 | a0001 | c0001 | t0001 | g0148 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01081 | hp1 | a0001 | c0001 | t0001 | g0210 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01081 | hp2 | a0001 | c0001 | t0001 | g0123 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01099 | hp1 | a0001 | c0001 | t0001 | g0090 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01106 | hp1 | a0001 | c0001 | t0001 | g0003 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01109 | hp1 | a0001 | c0001 | t0001 | g0133 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0104 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01175 | hp1 | a0001 | c0001 | t0001 | g0243 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01175 | hp2 | a0001 | c0001 | t0002 | g0059 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01192 | hp1 | a0001 | c0001 | t0001 | g0135 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01243 | hp1 | a0001 | c0001 | t0001 | g0068 | AMR | PUR | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01255 | hp1 | a0001 | c0001 | t0002 | g0132 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01256 | hp1 | a0001 | c0001 | t0001 | g0113 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01257 | hp1 | a0001 | c0001 | t0001 | g0256 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01257 | hp2 | a0001 | c0001 | t0002 | g0024 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01258 | hp1 | a0001 | c0001 | t0001 | g0237 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01261 | hp1 | a0001 | c0001 | t0001 | g0106 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01346 | hp1 | a0001 | c0001 | t0001 | g0006 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01346 | hp2 | a0001 | c0001 | t0001 | g0245 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0117 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01361 | hp1 | a0001 | c0001 | t0001 | g0269 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01361 | hp2 | a0001 | c0001 | t0001 | g0140 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0153 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01496 | hp1 | a0001 | c0002 | t0001 | g0069 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01496 | hp2 | a0001 | c0001 | t0001 | g0050 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01515 | hp1 | a0001 | c0001 | t0002 | g0043 | EUR | IBS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01517 | hp1 | a0001 | c0001 | t0001 | g0271 | EUR | IBS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01517 | hp2 | a0001 | c0001 | t0002 | g0034 | EUR | IBS | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01884 | hp1 | a0001 | c0001 | t0001 | g0190 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01884 | hp2 | a0001 | c0001 | t0001 | g0064 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01891 | hp1 | a0001 | c0001 | t0002 | g0152 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01891 | hp2 | a0001 | c0001 | t0001 | g0054 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01928 | hp1 | a0001 | c0001 | t0001 | g0180 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01934 | hp1 | a0001 | c0001 | t0001 | g0098 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01943 | hp1 | a0001 | c0001 | t0001 | g0111 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0175 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01993 | hp1 | a0001 | c0001 | t0002 | g0019 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01993 | hp2 | a0001 | c0001 | t0001 | g0084 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02015 | hp1 | a0001 | c0001 | t0001 | g0154 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02027 | hp1 | a0001 | c0001 | t0001 | g0159 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0124 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02055 | hp1 | a0001 | c0001 | t0003 | g0198 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02056 | hp1 | a0001 | c0001 | t0002 | g0040 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02071 | hp1 | a0001 | c0001 | t0001 | g0268 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02074 | hp1 | a0001 | c0001 | t0001 | g0262 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02080 | hp1 | a0001 | c0001 | t0001 | g0184 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02080 | hp2 | a0001 | c0001 | t0002 | g0053 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02083 | hp1 | a0001 | c0001 | t0001 | g0076 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02129 | hp1 | a0001 | c0001 | t0001 | g0193 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02132 | hp1 | a0001 | c0001 | t0002 | g0028 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02135 | hp1 | a0001 | c0001 | t0001 | g0095 | EAS | KHV | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02145 | hp1 | a0001 | c0001 | t0001 | g0212 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02148 | hp1 | a0001 | c0001 | t0001 | g0127 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02148 | hp2 | a0001 | c0001 | t0002 | g0031 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02165 | hp1 | a0001 | c0001 | t0001 | g0226 | EAS | CDX | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02165 | hp2 | a0001 | c0001 | t0001 | g0091 | EAS | CDX | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02257 | hp1 | a0001 | c0001 | t0001 | g0163 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02257 | hp2 | a0001 | c0001 | t0001 | g0185 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02258 | hp1 | a0001 | c0001 | t0001 | g0189 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02273 | hp1 | a0001 | c0001 | t0001 | g0119 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02273 | hp2 | a0001 | c0001 | t0001 | g0060 | AMR | PEL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02280 | hp1 | a0001 | c0001 | t0001 | g0270 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02280 | hp2 | a0001 | c0001 | t0001 | g0173 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02451 | hp1 | a0001 | c0001 | t0001 | g0012 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02451 | hp2 | a0001 | c0001 | t0001 | g0089 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0209 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02602 | hp1 | a0001 | c0001 | t0001 | g0116 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02615 | hp1 | a0001 | c0001 | t0001 | g0146 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02615 | hp2 | a0001 | c0001 | t0003 | g0248 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02622 | hp1 | a0001 | c0001 | t0001 | g0011 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02622 | hp2 | a0001 | c0001 | t0001 | g0145 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02630 | hp1 | a0001 | c0001 | t0001 | g0008 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02630 | hp2 | a0001 | c0001 | t0001 | g0009 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02647 | hp1 | a0001 | c0001 | t0001 | g0170 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02683 | hp1 | a0001 | c0001 | t0002 | g0218 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02683 | hp2 | a0001 | c0001 | t0002 | g0141 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02698 | hp1 | a0001 | c0001 | t0001 | g0181 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02717 | hp1 | a0001 | c0001 | t0001 | g0073 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02723 | hp1 | a0001 | c0001 | t0001 | g0186 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02723 | hp2 | a0001 | c0001 | t0001 | g0208 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0158 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02738 | hp1 | a0001 | c0001 | t0002 | g0223 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02809 | hp1 | a0001 | c0001 | t0001 | g0168 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02809 | hp2 | a0001 | c0001 | t0001 | g0178 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02818 | hp1 | a0001 | c0001 | t0001 | g0164 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02818 | hp2 | a0001 | c0001 | t0001 | g0176 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02886 | hp1 | a0001 | c0003 | t0001 | g0075 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02886 | hp2 | a0001 | c0001 | t0001 | g0120 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02895 | hp1 | a0001 | c0001 | t0001 | g0194 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02896 | hp1 | a0001 | c0001 | t0002 | g0187 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02896 | hp2 | a0001 | c0001 | t0001 | g0171 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02897 | hp1 | a0001 | c0001 | t0001 | g0169 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02897 | hp2 | a0001 | c0001 | t0001 | g0195 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02922 | hp1 | a0001 | c0001 | t0003 | g0205 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02922 | hp2 | a0001 | c0001 | t0001 | g0200 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02965 | hp1 | a0001 | c0001 | t0001 | g0103 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02976 | hp1 | a0001 | c0001 | t0001 | g0002 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02976 | hp2 | a0001 | c0001 | t0001 | g0177 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0242 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0067 | AFR | MSL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03130 | hp1 | a0001 | c0001 | t0001 | g0094 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03139 | hp1 | a0001 | c0001 | t0001 | g0055 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03195 | hp1 | a0001 | c0001 | t0003 | g0206 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03195 | hp2 | a0001 | c0001 | t0001 | g0246 | AFR | ESN | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03209 | hp1 | a0001 | c0001 | t0001 | g0070 | AFR | MSL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03225 | hp1 | a0001 | c0002 | t0001 | g0062 | AFR | MSL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03239 | hp1 | a0001 | c0001 | t0001 | g0211 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03239 | hp2 | a0001 | c0001 | t0001 | g0099 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03486 | hp1 | a0001 | c0001 | t0001 | g0188 | AFR | MSL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03486 | hp2 | a0001 | c0001 | t0001 | g0105 | AFR | MSL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03490 | hp1 | a0001 | c0001 | t0002 | g0016 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03491 | hp1 | a0001 | c0001 | t0002 | g0018 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03491 | hp2 | a0001 | c0001 | t0001 | g0231 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03492 | hp1 | a0001 | c0001 | t0002 | g0033 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03540 | hp1 | a0001 | c0001 | t0001 | g0010 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03540 | hp2 | a0001 | c0001 | t0001 | g0101 | AFR | GWD | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03579 | hp1 | a0001 | c0001 | t0001 | g0074 | AFR | MSL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03654 | hp1 | a0001 | c0001 | t0001 | g0236 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03669 | hp1 | a0001 | c0001 | t0001 | g0051 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03669 | hp2 | a0001 | c0001 | t0002 | g0015 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03688 | hp1 | a0001 | c0001 | t0001 | g0048 | SAS | STU | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03704 | hp1 | a0001 | c0001 | t0001 | g0160 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03704 | hp2 | a0001 | c0001 | t0002 | g0026 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03710 | hp1 | a0001 | c0001 | t0002 | g0017 | SAS | PJL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03831 | hp1 | a0001 | c0001 | t0001 | g0259 | SAS | BEB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03831 | hp2 | a0001 | c0001 | t0002 | g0029 | SAS | BEB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03942 | hp1 | a0001 | c0001 | t0002 | g0021 | SAS | BEB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG04115 | hp1 | a0001 | c0001 | t0002 | g0039 | SAS | STU | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG04184 | hp1 | a0001 | c0001 | t0001 | g0244 | SAS | BEB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG04184 | hp2 | a0001 | c0001 | t0001 | g0114 | SAS | BEB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0229 | SAS | STU | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0255 | SAS | STU | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0143 | SAS | STU | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0174 | AFR | YRI | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0179 | EAS | CHB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18747 | hp1 | a0001 | c0001 | t0001 | g0131 | EAS | CHB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18906 | hp1 | a0001 | c0002 | t0001 | g0063 | AFR | YRI | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18906 | hp2 | a0001 | c0001 | t0001 | g0136 | AFR | YRI | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18940 | hp1 | a0001 | c0001 | t0001 | g0138 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18941 | hp1 | a0001 | c0001 | t0001 | g0201 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18941 | hp2 | a0001 | c0001 | t0005 | g0087 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0199 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18944 | hp1 | a0001 | c0001 | t0004 | g0032 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0249 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18947 | hp1 | a0001 | c0001 | t0001 | g0232 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18947 | hp2 | a0001 | c0001 | t0001 | g0107 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0092 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18949 | hp1 | a0001 | c0001 | t0001 | g0252 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18949 | hp2 | a0001 | c0001 | t0001 | g0151 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18950 | hp1 | a0001 | c0001 | t0002 | g0257 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18950 | hp2 | a0001 | c0001 | t0001 | g0109 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18952 | hp1 | a0001 | c0001 | t0002 | g0027 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18954 | hp1 | a0001 | c0001 | t0001 | g0093 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18954 | hp2 | a0001 | c0001 | t0001 | g0227 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18957 | hp1 | a0001 | c0001 | t0001 | g0086 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18957 | hp2 | a0001 | c0001 | t0001 | g0192 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18959 | hp1 | a0001 | c0001 | t0001 | g0082 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18960 | hp1 | a0001 | c0001 | t0004 | g0035 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0222 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18962 | hp1 | a0001 | c0001 | t0001 | g0233 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18964 | hp1 | a0001 | c0001 | t0001 | g0130 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18964 | hp2 | a0001 | c0001 | t0001 | g0196 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0097 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18966 | hp1 | a0001 | c0001 | t0001 | g0274 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0052 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18968 | hp1 | a0001 | c0001 | t0001 | g0264 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18968 | hp2 | a0001 | c0001 | t0001 | g0110 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18969 | hp1 | a0001 | c0001 | t0002 | g0030 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18969 | hp2 | a0001 | c0001 | t0001 | g0251 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0238 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0150 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0240 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18975 | hp1 | a0001 | c0001 | t0001 | g0272 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18975 | hp2 | a0001 | c0001 | t0002 | g0044 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18977 | hp1 | a0001 | c0001 | t0001 | g0172 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18979 | hp1 | a0001 | c0001 | t0002 | g0047 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18979 | hp2 | a0001 | c0001 | t0001 | g0275 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18981 | hp1 | a0001 | c0001 | t0001 | g0125 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18981 | hp2 | a0001 | c0001 | t0001 | g0258 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18982 | hp1 | a0001 | c0001 | t0001 | g0081 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18983 | hp1 | a0001 | c0001 | t0002 | g0025 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18984 | hp1 | a0001 | c0001 | t0001 | g0118 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18986 | hp1 | a0001 | c0001 | t0001 | g0215 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0241 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18989 | hp1 | a0001 | c0001 | t0001 | g0263 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18990 | hp1 | a0001 | c0001 | t0002 | g0037 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18991 | hp1 | a0001 | c0001 | t0001 | g0139 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18991 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18994 | hp1 | a0001 | c0001 | t0001 | g0096 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18995 | hp1 | a0001 | c0001 | t0001 | g0079 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18999 | hp1 | a0001 | c0001 | t0001 | g0182 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18999 | hp2 | a0001 | c0001 | t0001 | g0129 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19000 | hp1 | a0001 | c0001 | t0002 | g0046 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19003 | hp1 | a0001 | c0001 | t0001 | g0261 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19003 | hp2 | a0001 | c0001 | t0001 | g0137 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19004 | hp1 | a0001 | c0001 | t0001 | g0219 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19005 | hp1 | a0001 | c0001 | t0001 | g0230 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19006 | hp1 | a0001 | c0001 | t0002 | g0214 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19007 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19009 | hp1 | a0001 | c0001 | t0001 | g0161 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0239 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19011 | hp2 | a0001 | c0001 | t0002 | g0038 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0121 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0066 | AFR | LWK | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19055 | hp1 | a0001 | c0001 | t0001 | g0234 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0108 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19058 | hp1 | a0001 | c0001 | t0001 | g0266 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19060 | hp1 | a0001 | c0001 | t0001 | g0235 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19062 | hp1 | a0001 | c0001 | t0001 | g0165 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19063 | hp1 | a0001 | c0001 | t0001 | g0217 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19064 | hp1 | a0001 | c0001 | t0001 | g0253 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19064 | hp2 | a0001 | c0001 | t0002 | g0260 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19065 | hp1 | a0001 | c0001 | t0001 | g0191 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19065 | hp2 | a0001 | c0004 | t0001 | g0167 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19066 | hp1 | a0001 | c0001 | t0001 | g0072 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19067 | hp1 | a0001 | c0001 | t0001 | g0155 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19068 | hp1 | a0001 | c0001 | t0005 | g0149 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19070 | hp1 | a0001 | c0001 | t0001 | g0156 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19077 | hp1 | a0001 | c0001 | t0002 | g0042 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19077 | hp2 | a0001 | c0001 | t0001 | g0254 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19079 | hp1 | a0001 | c0001 | t0001 | g0085 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19080 | hp1 | a0001 | c0001 | t0001 | g0224 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19080 | hp2 | a0001 | c0001 | t0001 | g0100 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19081 | hp1 | a0001 | c0001 | t0001 | g0077 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19081 | hp2 | a0001 | c0001 | t0001 | g0267 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19082 | hp1 | a0001 | c0001 | t0002 | g0045 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19083 | hp1 | a0001 | c0001 | t0002 | g0041 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19085 | hp1 | a0001 | c0001 | t0001 | g0083 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19086 | hp1 | a0001 | c0001 | t0001 | g0216 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19087 | hp1 | a0001 | c0001 | t0001 | g0126 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19087 | hp2 | a0001 | c0001 | t0002 | g0005 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19089 | hp1 | a0001 | c0001 | t0001 | g0247 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19090 | hp1 | a0001 | c0001 | t0001 | g0020 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19090 | hp2 | a0001 | c0001 | t0001 | g0228 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19091 | hp1 | a0001 | c0001 | t0001 | g0225 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19240 | hp1 | a0001 | c0001 | t0001 | g0204 | AFR | YRI | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA19240 | hp2 | a0001 | c0001 | t0003 | g0134 | AFR | YRI | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA20129 | hp1 | a0001 | c0001 | t0001 | g0166 | AFR | ASW | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0013 | AFR | ASW | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA20752 | hp1 | a0001 | c0001 | t0001 | g0112 | EUR | TSI | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA20805 | hp1 | a0001 | c0001 | t0002 | g0056 | EUR | TSI | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0122 | SAS | GIH | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01123 | hp1 | a0001 | c0001 | t0001 | g0220 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG01123 | hp2 | a0001 | c0001 | t0002 | g0058 | AMR | CLM | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02109 | hp1 | a0001 | c0001 | t0001 | g0088 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02109 | hp2 | a0001 | c0001 | t0001 | g0250 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02486 | hp1 | a0001 | c0001 | t0001 | g0203 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02559 | hp1 | a0001 | c0001 | t0001 | g0202 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG02559 | hp2 | a0001 | c0001 | t0001 | g0049 | AFR | ACB | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| HG03471 | hp1 | a0001 | c0003 | t0001 | g0061 | AFR | MSL | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA18955 | hp1 | a0001 | c0001 | t0001 | g0221 | EAS | JPT | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA20300 | hp1 | a0001 | c0001 | t0001 | g0007 | AFR | USA | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA20300 | hp2 | a0001 | c0001 | t0001 | g0065 | AFR | USA | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA21309 | hp1 | a0001 | c0001 | t0001 | g0102 | AFR | LWK | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| NA21309 | hp2 | a0001 | c0001 | t0001 | g0213 | AFR | LWK | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| homoSapiens | chm13v2 | a0001 | c0001 | t0001 | g0080 | REF | REF | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| homoSapiens | grch38p0 | a0001 | c0001 | t0001 | g0115 | REF | REF | STAG2_chrX_123956706_124107656 | STAG2 | chrX | 123956706 | 124107656 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:124051156 | A | G | 1 | a0001c0004 | 1 | NA19065.hp2 | synonymous_variant | LOW | c.1053A>G | p.Leu351Leu | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 12/35 | 1366/6179 | 1053/3807 | 351/1268 | chrX | 124051156 | |||
| chrX:124065932 | C | T | 1 | a0001c0003 | 2 | HG02886.hp1 HG03471.hp1 |
synonymous_variant | LOW | c.2082C>T | p.Ile694Ile | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 21/35 | 2395/6179 | 2082/3807 | 694/1268 | chrX | 124065932 | |||
| chrX:124090657 | A | G | 1 | a0001c0002 | 3 | HG01496.hp1 HG03225.hp1 NA18906.hp1 |
synonymous_variant | LOW | c.3360A>G | p.Gln1120Gln | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 31/35 | 3673/6179 | 3360/3807 | 1120/1268 | chrX | 124090657 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:124021376 | G | A | 1 | a0001c0001t0005 | 2 | NA18941.hp2 NA19068.hp1 |
5_prime_UTR_variant | MODIFIER | c.-153G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 2/35 | 1252 | chrX | 124021376 | ||||||
| chrX:124100883 | TA | T | 2 | a0001c0001t0002 a0001c0001t0004 |
50 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(47): Show |
3_prime_UTR_variant | MODIFIER | c.*301delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 35/35 | 301 | INFO_REALIGN_3_PRIME | chrX | 124100883 | |||||
| chrX:124100892 | A | C | 1 | a0001c0001t0003 | 5 | HG02055.hp1 HG02615.hp2 HG02922.hp1 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*295A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 35/35 | 295 | chrX | 124100892 | ||||||
| chrX:124101171 | A | G | 1 | a0001c0001t0004 | 3 | HG00597.hp1 NA18944.hp1 NA18960.hp1 |
3_prime_UTR_variant | MODIFIER | c.*574A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 35/35 | 574 | chrX | 124101171 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:123961903 | C | T | 4 | a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 others(1): Show |
4 | HG00558.hp2 NA18966.hp1 NA18975.hp1 others(1): Show |
intron_variant | MODIFIER | c.-163+47C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123961903 | |||||||
| chrX:123962026 | T | C | 1 | a0001c0001t0001g0002 | 1 | HG02976.hp1 | intron_variant | MODIFIER | c.-163+170T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123962026 | |||||||
| chrX:123962500 | G | A | 1 | a0001c0001t0001g0003 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.-163+644G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123962500 | |||||||
| chrX:123962697 | C | T | 1 | a0001c0001t0001g0271 | 1 | HG01517.hp1 | intron_variant | MODIFIER | c.-163+841C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123962697 | |||||||
| chrX:123962854 | T | A | 1 | a0001c0001t0001g0004 | 1 | NA18991.hp2 | intron_variant | MODIFIER | c.-163+998T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123962854 | |||||||
| chrX:123963373 | A | G | 1 | a0001c0001t0001g0270 | 1 | HG02280.hp1 | intron_variant | MODIFIER | c.-163+1517A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123963373 | |||||||
| chrX:123963488 | G | C | 1 | a0001c0001t0001g0004 | 1 | NA18991.hp2 | intron_variant | MODIFIER | c.-163+1632G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123963488 | |||||||
| chrX:123963615 | A | AT | 90 | a0001c0001t0001g0004 a0001c0001t0001g0181 a0001c0001t0001g0182 others(87): Show |
90 | HG00438.hp1 HG00438.hp2 HG00621.hp1 others(87): Show |
intron_variant | MODIFIER | c.-163+1770dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123963615 | ||||||
| chrX:123963732 | C | G | 1 | a0001c0001t0001g0180 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.-163+1876C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123963732 | |||||||
| chrX:123964107 | A | T | 1 | a0001c0001t0001g0179 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.-163+2251A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123964107 | |||||||
| chrX:123964250 | C | CA | 52 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(49): Show |
52 | HG00140.hp1 HG00438.hp1 HG00597.hp1 others(49): Show |
intron_variant | MODIFIER | c.-163+2407dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123964250 | ||||||
| chrX:123964304 | C | T | 1 | a0001c0001t0001g0269 | 1 | HG01361.hp1 | intron_variant | MODIFIER | c.-163+2448C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123964304 | |||||||
| chrX:123964319 | A | G | 1 | a0001c0001t0001g0178 | 1 | HG02809.hp2 | intron_variant | MODIFIER | c.-163+2463A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123964319 | |||||||
| chrX:123964571 | G | T | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-163+2715G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123964571 | |||||||
| chrX:123964597 | T | C | 1 | a0001c0001t0001g0184 | 1 | HG02080.hp1 | intron_variant | MODIFIER | c.-163+2741T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123964597 | |||||||
| chrX:123964718 | GT | G | 69 | a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(66): Show |
69 | HG00140.hp1 HG00280.hp1 HG00558.hp1 others(66): Show |
intron_variant | MODIFIER | c.-163+2875delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123964718 | ||||||
| chrX:123964891 | A | G | 7 | a0001c0001t0001g0004 a0001c0001t0001g0173 a0001c0001t0001g0174 others(4): Show |
7 | HG01952.hp1 HG02071.hp1 HG02280.hp2 others(4): Show |
intron_variant | MODIFIER | c.-163+3035A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123964891 | |||||||
| chrX:123964960 | C | CT | 66 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 others(63): Show |
66 | HG00140.hp1 HG00438.hp1 HG00438.hp2 others(63): Show |
intron_variant | MODIFIER | c.-163+3122dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123964960 | ||||||
| chrX:123965055 | C | T | 1 | a0001c0004t0001g0167 | 1 | NA19065.hp2 | intron_variant | MODIFIER | c.-163+3199C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123965055 | |||||||
| chrX:123965257 | A | G | 1 | a0001c0001t0001g0166 | 1 | NA20129.hp1 | intron_variant | MODIFIER | c.-163+3401A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123965257 | |||||||
| chrX:123965411 | C | T | 1 | a0001c0001t0001g0165 | 1 | NA19062.hp1 | intron_variant | MODIFIER | c.-163+3555C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123965411 | |||||||
| chrX:123965453 | T | G | 4 | a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 others(1): Show |
4 | HG00558.hp2 NA18966.hp1 NA18975.hp1 others(1): Show |
intron_variant | MODIFIER | c.-163+3597T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123965453 | |||||||
| chrX:123965874 | C | G | 1 | a0001c0001t0001g0164 | 1 | HG02818.hp1 | intron_variant | MODIFIER | c.-163+4018C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123965874 | |||||||
| chrX:123966132 | G | C | 1 | a0001c0001t0001g0072 | 1 | NA19066.hp1 | intron_variant | MODIFIER | c.-163+4276G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123966132 | |||||||
| chrX:123966160 | T | C | 2 | a0001c0002t0001g0062 a0001c0002t0001g0063 |
2 | HG03225.hp1 NA18906.hp1 |
intron_variant | MODIFIER | c.-163+4304T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123966160 | |||||||
| chrX:123966228 | TGAGGCAG others(3): Show |
T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+4375_-163+438 others(14): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123966228 | ||||||
| chrX:123966332 | C | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-163+4476C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123966332 | |||||||
| chrX:123966334 | C | T | 5 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(2): Show |
5 | HG02257.hp2 HG02258.hp1 HG02723.hp1 others(2): Show |
intron_variant | MODIFIER | c.-163+4478C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123966334 | |||||||
| chrX:123966351 | G | A | 167 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(164): Show |
167 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(164): Show |
intron_variant | MODIFIER | c.-163+4495G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123966351 | |||||||
| chrX:123966458 | TA | T | 9 | a0001c0001t0001g0008 a0001c0001t0001g0171 a0001c0001t0001g0261 others(6): Show |
9 | HG01515.hp1 HG02630.hp1 HG02896.hp2 others(6): Show |
intron_variant | MODIFIER | c.-163+4615delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123966458 | ||||||
| chrX:123966762 | C | A | 1 | a0001c0001t0001g0076 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-163+4906C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123966762 | |||||||
| chrX:123966975 | C | G | 1 | a0001c0001t0002g0041 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.-163+5119C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123966975 | |||||||
| chrX:123967256 | A | AT | 39 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(36): Show |
39 | HG00673.hp1 HG00735.hp1 HG01257.hp1 others(36): Show |
intron_variant | MODIFIER | c.-163+5426dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123967256 | ||||||
| chrX:123967256 | A | ATT | 40 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(37): Show |
40 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(37): Show |
intron_variant | MODIFIER | c.-163+5425_-163+542 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123967256 | ||||||
| chrX:123967256 | A | ATTT | 7 | a0001c0001t0001g0008 a0001c0001t0001g0048 a0001c0001t0001g0060 others(4): Show |
7 | HG01175.hp2 HG02056.hp1 HG02273.hp2 others(4): Show |
intron_variant | MODIFIER | c.-163+5424_-163+542 others(7): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123967256 | ||||||
| chrX:123967256 | AT | A | 15 | a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0168 others(12): Show |
15 | HG00642.hp1 HG01884.hp1 HG01952.hp1 others(12): Show |
intron_variant | MODIFIER | c.-163+5426delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123967256 | ||||||
| chrX:123967256 | ATTT | A | 9 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0054 others(6): Show |
9 | HG01243.hp1 HG01884.hp2 HG01891.hp2 others(6): Show |
intron_variant | MODIFIER | c.-163+5424_-163+542 others(7): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123967256 | ||||||
| chrX:123967346 | A | C | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-163+5490A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123967346 | |||||||
| chrX:123967397 | CTGGGATT others(6960): Show |
C | 1 | a0001c0001t0001g0079 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.-163+5556_-163+125 others(5): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123967397 | ||||||
| chrX:123967493 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+5637C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123967493 | |||||||
| chrX:123967839 | C | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-163+5983C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123967839 | |||||||
| chrX:123967947 | C | G | 1 | a0001c0001t0001g0084 | 1 | HG01993.hp2 | intron_variant | MODIFIER | c.-163+6091C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123967947 | |||||||
| chrX:123968142 | G | A | 1 | a0001c0001t0001g0118 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-163+6286G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123968142 | |||||||
| chrX:123968476 | G | A | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-163+6620G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123968476 | |||||||
| chrX:123968765 | AACTT | A | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-163+6911_-163+691 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123968765 | ||||||
| chrX:123969218 | G | A | 1 | a0001c0001t0001g0228 | 1 | NA19090.hp2 | intron_variant | MODIFIER | c.-163+7362G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123969218 | |||||||
| chrX:123969255 | G | A | 1 | a0001c0001t0005g0087 | 1 | NA18941.hp2 | intron_variant | MODIFIER | c.-163+7399G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123969255 | |||||||
| chrX:123969567 | T | C | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.-163+7711T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123969567 | |||||||
| chrX:123969693 | G | A | 4 | a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 others(1): Show |
4 | HG00558.hp2 NA18966.hp1 NA18975.hp1 others(1): Show |
intron_variant | MODIFIER | c.-163+7837G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123969693 | |||||||
| chrX:123969952 | G | GT | 30 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0009 others(27): Show |
30 | HG01433.hp1 HG01496.hp1 HG01496.hp2 others(27): Show |
intron_variant | MODIFIER | c.-163+8123dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123969952 | ||||||
| chrX:123969952 | G | GTT | 52 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(49): Show |
52 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(49): Show |
intron_variant | MODIFIER | c.-163+8122_-163+812 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123969952 | ||||||
| chrX:123969952 | GT | G | 24 | a0001c0001t0001g0049 a0001c0001t0001g0082 a0001c0001t0001g0084 others(21): Show |
24 | HG00280.hp1 HG00597.hp2 HG01123.hp2 others(21): Show |
intron_variant | MODIFIER | c.-163+8123delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123969952 | ||||||
| chrX:123969952 | GTTTTTTT others(4): Show |
G | 1 | a0001c0001t0001g0129 | 1 | NA18999.hp2 | intron_variant | MODIFIER | c.-163+8113_-163+812 others(15): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123969952 | ||||||
| chrX:123969952 | GTTTTTTT others(7): Show |
G | 2 | a0001c0001t0001g0120 a0001c0001t0002g0152 |
2 | HG01891.hp1 HG02886.hp2 |
intron_variant | MODIFIER | c.-163+8110_-163+812 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123969952 | ||||||
| chrX:123969979 | TA | T | 6 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(3): Show |
6 | HG02280.hp2 HG02647.hp1 HG02809.hp1 others(3): Show |
intron_variant | MODIFIER | c.-163+8125delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123969979 | ||||||
| chrX:123969980 | A | T | 1 | a0001c0001t0001g0175 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.-163+8124A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123969980 | |||||||
| chrX:123970022 | T | C | 1 | a0001c0001t0002g0031 | 1 | HG02148.hp2 | intron_variant | MODIFIER | c.-163+8166T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123970022 | |||||||
| chrX:123970287 | G | A | 1 | a0001c0001t0001g0060 | 1 | HG02273.hp2 | intron_variant | MODIFIER | c.-163+8431G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123970287 | |||||||
| chrX:123970373 | G | A | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-163+8517G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123970373 | |||||||
| chrX:123970639 | C | A | 1 | a0001c0001t0001g0055 | 1 | HG03139.hp1 | intron_variant | MODIFIER | c.-163+8783C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123970639 | |||||||
| chrX:123971119 | G | A | 1 | a0001c0001t0002g0071 | 1 | HG00558.hp1 | intron_variant | MODIFIER | c.-163+9263G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123971119 | |||||||
| chrX:123971403 | G | A | 2 | a0001c0001t0001g0074 a0001c0003t0001g0075 |
2 | HG02886.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.-163+9547G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123971403 | |||||||
| chrX:123971873 | C | G | 1 | a0001c0001t0001g0228 | 1 | NA19090.hp2 | intron_variant | MODIFIER | c.-163+10017C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123971873 | |||||||
| chrX:123971941 | A | G | 60 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(57): Show |
60 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(57): Show |
intron_variant | MODIFIER | c.-163+10085A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123971941 | |||||||
| chrX:123972049 | G | A | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-163+10193G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972049 | |||||||
| chrX:123972276 | AT | A | 8 | a0001c0001t0001g0078 a0001c0001t0001g0119 a0001c0001t0001g0135 others(5): Show |
8 | HG00280.hp1 HG00642.hp1 HG01123.hp2 others(5): Show |
intron_variant | MODIFIER | c.-163+10432delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123972276 | ||||||
| chrX:123972291 | T | G | 1 | a0001c0001t0001g0097 | 1 | NA18965.hp1 | intron_variant | MODIFIER | c.-163+10435T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972291 | |||||||
| chrX:123972370 | A | G | 1 | a0001c0001t0001g0190 | 1 | HG01884.hp1 | intron_variant | MODIFIER | c.-163+10514A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972370 | |||||||
| chrX:123972414 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+10558G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972414 | |||||||
| chrX:123972419 | T | C | 1 | a0001c0001t0001g0242 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-163+10563T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972419 | |||||||
| chrX:123972490 | C | G | 1 | a0001c0001t0001g0158 | 1 | HG02735.hp1 | intron_variant | MODIFIER | c.-163+10634C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972490 | |||||||
| chrX:123972513 | C | T | 2 | a0001c0001t0001g0052 a0001c0001t0001g0107 |
2 | NA18947.hp2 NA18967.hp1 |
intron_variant | MODIFIER | c.-163+10657C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972513 | |||||||
| chrX:123972566 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+10710C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972566 | |||||||
| chrX:123972568 | G | A | 1 | a0001c0001t0001g0155 | 1 | NA19067.hp1 | intron_variant | MODIFIER | c.-163+10712G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972568 | |||||||
| chrX:123972632 | G | A | 1 | a0001c0001t0001g0003 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.-163+10776G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972632 | |||||||
| chrX:123972647 | C | G | 60 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(57): Show |
60 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(57): Show |
intron_variant | MODIFIER | c.-163+10791C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972647 | |||||||
| chrX:123972789 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+10933C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972789 | |||||||
| chrX:123972866 | C | CA | 37 | a0001c0001t0001g0001 a0001c0001t0001g0050 a0001c0001t0001g0052 others(34): Show |
37 | HG00280.hp1 HG00642.hp1 HG01081.hp1 others(34): Show |
intron_variant | MODIFIER | c.-163+11035dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123972866 | ||||||
| chrX:123972866 | C | CAA | 55 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0088 others(52): Show |
55 | HG00621.hp1 HG00639.hp2 HG01123.hp1 others(52): Show |
intron_variant | MODIFIER | c.-163+11034_-163+11 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123972866 | ||||||
| chrX:123972866 | C | CAAA | 23 | a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0202 others(20): Show |
23 | HG00438.hp2 HG01175.hp1 HG02071.hp1 others(20): Show |
intron_variant | MODIFIER | c.-163+11033_-163+11 others(9): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123972866 | ||||||
| chrX:123972866 | C | CAAAAA | 24 | a0001c0001t0001g0006 a0001c0001t0001g0048 a0001c0001t0001g0049 others(21): Show |
24 | HG00438.hp1 HG00609.hp1 HG01346.hp1 others(21): Show |
intron_variant | MODIFIER | c.-163+11031_-163+11 others(11): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123972866 | ||||||
| chrX:123972866 | C | CAAAAAA | 21 | a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 others(18): Show |
21 | HG00140.hp1 HG00558.hp1 HG00735.hp2 others(18): Show |
intron_variant | MODIFIER | c.-163+11030_-163+11 others(12): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123972866 | ||||||
| chrX:123972866 | CA | C | 8 | a0001c0001t0001g0055 a0001c0001t0001g0064 a0001c0001t0001g0065 others(5): Show |
8 | HG01496.hp1 HG01884.hp2 HG03139.hp1 others(5): Show |
intron_variant | MODIFIER | c.-163+11035delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123972866 | ||||||
| chrX:123972941 | C | T | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.-163+11085C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123972941 | |||||||
| chrX:123973414 | T | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+11558T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123973414 | |||||||
| chrX:123973479 | T | C | 1 | a0001c0001t0001g0121 | 1 | NA19012.hp1 | intron_variant | MODIFIER | c.-163+11623T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123973479 | |||||||
| chrX:123973540 | C | CA | 140 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(137): Show |
140 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(137): Show |
intron_variant | MODIFIER | c.-163+11704dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123973540 | ||||||
| chrX:123973540 | C | CAA | 19 | a0001c0001t0001g0004 a0001c0001t0001g0048 a0001c0001t0001g0060 others(16): Show |
19 | HG00621.hp1 HG01175.hp2 HG01952.hp1 others(16): Show |
intron_variant | MODIFIER | c.-163+11703_-163+11 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123973540 | ||||||
| chrX:123973561 | T | A | 6 | a0001c0001t0001g0082 a0001c0001t0001g0176 a0001c0001t0001g0177 others(3): Show |
6 | HG02280.hp1 HG02818.hp2 HG02976.hp2 others(3): Show |
intron_variant | MODIFIER | c.-163+11705T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123973561 | |||||||
| chrX:123973688 | T | C | 1 | a0001c0001t0003g0134 | 1 | NA19240.hp2 | intron_variant | MODIFIER | c.-163+11832T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123973688 | |||||||
| chrX:123973712 | T | C | 60 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(57): Show |
60 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(57): Show |
intron_variant | MODIFIER | c.-163+11856T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123973712 | |||||||
| chrX:123973739 | G | A | 1 | a0001c0001t0001g0090 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.-163+11883G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123973739 | |||||||
| chrX:123974166 | G | A | 1 | a0001c0001t0001g0191 | 1 | NA19065.hp1 | intron_variant | MODIFIER | c.-163+12310G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123974166 | |||||||
| chrX:123974236 | C | CT | 46 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(43): Show |
46 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(43): Show |
intron_variant | MODIFIER | c.-163+12394dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123974236 | ||||||
| chrX:123974364 | T | C | 272 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(269): Show |
273 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(270): Show |
intron_variant | MODIFIER | c.-163+12508T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123974364 | |||||||
| chrX:123974402 | T | C | 1 | a0001c0001t0002g0014 | 1 | HG00140.hp1 | intron_variant | MODIFIER | c.-163+12546T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123974402 | |||||||
| chrX:123974445 | C | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+12589C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123974445 | |||||||
| chrX:123974532 | A | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+12676A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123974532 | |||||||
| chrX:123974573 | C | A | 1 | a0001c0001t0001g0192 | 1 | NA18957.hp2 | intron_variant | MODIFIER | c.-163+12717C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123974573 | |||||||
| chrX:123974577 | C | CT | 15 | a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0074 others(12): Show |
15 | HG00597.hp2 HG00735.hp1 HG01069.hp1 others(12): Show |
intron_variant | MODIFIER | c.-163+12740dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123974577 | ||||||
| chrX:123974577 | CT | C | 5 | a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 others(2): Show |
5 | HG01993.hp2 HG03195.hp2 NA18959.hp1 others(2): Show |
intron_variant | MODIFIER | c.-163+12740delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123974577 | ||||||
| chrX:123974577 | CTTTTT | C | 80 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0166 others(77): Show |
80 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(77): Show |
intron_variant | MODIFIER | c.-163+12736_-163+12 others(11): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123974577 | ||||||
| chrX:123974857 | A | G | 3 | a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0041 |
3 | NA18990.hp1 NA19011.hp2 NA19083.hp1 |
intron_variant | MODIFIER | c.-163+13001A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123974857 | |||||||
| chrX:123974901 | A | G | 53 | a0001c0001t0001g0004 a0001c0001t0001g0181 a0001c0001t0001g0182 others(50): Show |
53 | HG00438.hp2 HG01123.hp1 HG01175.hp1 others(50): Show |
intron_variant | MODIFIER | c.-163+13045A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123974901 | |||||||
| chrX:123975042 | A | T | 1 | a0001c0001t0001g0271 | 1 | HG01517.hp1 | intron_variant | MODIFIER | c.-163+13186A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123975042 | |||||||
| chrX:123975052 | G | A | 1 | a0001c0001t0001g0173 | 1 | HG02280.hp2 | intron_variant | MODIFIER | c.-163+13196G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123975052 | |||||||
| chrX:123975186 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+13330G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123975186 | |||||||
| chrX:123975226 | AAAG | A | 4 | a0001c0001t0001g0051 a0001c0001t0001g0140 a0001c0001t0001g0142 others(1): Show |
4 | HG00639.hp1 HG01361.hp2 HG02683.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+13378_-163+13 others(9): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123975226 | ||||||
| chrX:123975519 | A | G | 4 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(1): Show |
4 | HG02451.hp1 HG02622.hp1 HG03540.hp1 others(1): Show |
intron_variant | MODIFIER | c.-163+13663A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123975519 | |||||||
| chrX:123975744 | A | G | 1 | a0001c0001t0001g0013 | 1 | NA20129.hp2 | intron_variant | MODIFIER | c.-163+13888A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123975744 | |||||||
| chrX:123975823 | A | G | 1 | a0001c0001t0001g0262 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.-163+13967A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123975823 | |||||||
| chrX:123976041 | T | C | 1 | a0001c0001t0002g0214 | 1 | NA19006.hp1 | intron_variant | MODIFIER | c.-163+14185T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123976041 | |||||||
| chrX:123976198 | C | G | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-163+14342C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123976198 | |||||||
| chrX:123976379 | C | T | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-163+14523C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123976379 | |||||||
| chrX:123976533 | A | T | 85 | a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(82): Show |
85 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(82): Show |
intron_variant | MODIFIER | c.-163+14677A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123976533 | |||||||
| chrX:123976545 | A | C | 60 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(57): Show |
60 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(57): Show |
intron_variant | MODIFIER | c.-163+14689A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123976545 | |||||||
| chrX:123976728 | A | C | 1 | a0001c0001t0001g0139 | 1 | NA18991.hp1 | intron_variant | MODIFIER | c.-163+14872A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123976728 | |||||||
| chrX:123976739 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+14883A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123976739 | |||||||
| chrX:123976879 | G | A | 1 | a0001c0001t0001g0193 | 1 | HG02129.hp1 | intron_variant | MODIFIER | c.-163+15023G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123976879 | |||||||
| chrX:123977016 | T | G | 1 | a0001c0001t0002g0015 | 1 | HG03669.hp2 | intron_variant | MODIFIER | c.-163+15160T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977016 | |||||||
| chrX:123977123 | C | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+15267C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977123 | |||||||
| chrX:123977391 | T | C | 13 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0054 others(10): Show |
13 | HG01243.hp1 HG01496.hp1 HG01884.hp2 others(10): Show |
intron_variant | MODIFIER | c.-163+15535T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977391 | |||||||
| chrX:123977444 | GT | G | 49 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(46): Show |
49 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show |
intron_variant | MODIFIER | c.-163+15596delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123977444 | ||||||
| chrX:123977451 | T | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+15595T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977451 | |||||||
| chrX:123977452 | T | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+15596T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977452 | |||||||
| chrX:123977463 | G | A | 10 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(7): Show |
10 | HG01496.hp1 HG01884.hp2 HG02630.hp2 others(7): Show |
intron_variant | MODIFIER | c.-163+15607G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977463 | |||||||
| chrX:123977743 | G | A | 13 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0054 others(10): Show |
13 | HG01243.hp1 HG01496.hp1 HG01884.hp2 others(10): Show |
intron_variant | MODIFIER | c.-163+15887G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977743 | |||||||
| chrX:123977765 | C | G | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.-163+15909C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977765 | |||||||
| chrX:123977832 | G | GT | 36 | a0001c0001t0001g0052 a0001c0001t0001g0072 a0001c0001t0001g0078 others(33): Show |
36 | HG00558.hp2 HG00642.hp1 HG00673.hp1 others(33): Show |
intron_variant | MODIFIER | c.-163+16003dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123977832 | ||||||
| chrX:123977832 | G | GTT | 12 | a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0133 others(9): Show |
12 | HG01109.hp1 HG01192.hp1 HG01255.hp1 others(9): Show |
intron_variant | MODIFIER | c.-163+16002_-163+16 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123977832 | ||||||
| chrX:123977832 | GT | G | 96 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 others(93): Show |
96 | HG00621.hp1 HG00639.hp2 HG01081.hp1 others(93): Show |
intron_variant | MODIFIER | c.-163+16003delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123977832 | ||||||
| chrX:123977832 | GTT | G | 13 | a0001c0001t0001g0070 a0001c0001t0001g0171 a0001c0001t0001g0186 others(10): Show |
13 | HG00280.hp1 HG01175.hp2 HG02258.hp1 others(10): Show |
intron_variant | MODIFIER | c.-163+16002_-163+16 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123977832 | ||||||
| chrX:123977839 | T | G | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-163+15983T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123977839 | |||||||
| chrX:123978070 | G | A | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-163+16214G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123978070 | |||||||
| chrX:123978154 | C | CT | 42 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(39): Show |
42 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(39): Show |
intron_variant | MODIFIER | c.-163+16317dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123978154 | ||||||
| chrX:123978154 | CT | C | 11 | a0001c0001t0001g0008 a0001c0001t0001g0090 a0001c0001t0001g0091 others(8): Show |
11 | HG01099.hp1 HG02015.hp1 HG02165.hp2 others(8): Show |
intron_variant | MODIFIER | c.-163+16317delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123978154 | ||||||
| chrX:123978864 | A | G | 43 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(40): Show |
43 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(40): Show |
intron_variant | MODIFIER | c.-163+17008A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123978864 | |||||||
| chrX:123979601 | T | C | 1 | a0001c0001t0001g0092 | 1 | NA18948.hp1 | intron_variant | MODIFIER | c.-163+17745T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123979601 | |||||||
| chrX:123979802 | T | G | 1 | a0001c0001t0001g0093 | 1 | NA18954.hp1 | intron_variant | MODIFIER | c.-163+17946T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123979802 | |||||||
| chrX:123979907 | A | G | 13 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0054 others(10): Show |
13 | HG01243.hp1 HG01496.hp1 HG01884.hp2 others(10): Show |
intron_variant | MODIFIER | c.-163+18051A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123979907 | |||||||
| chrX:123980028 | C | T | 2 | a0001c0001t0001g0074 a0001c0003t0001g0075 |
2 | HG02886.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.-163+18172C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123980028 | |||||||
| chrX:123980284 | G | A | 1 | a0001c0001t0001g0196 | 1 | NA18964.hp2 | intron_variant | MODIFIER | c.-163+18428G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123980284 | |||||||
| chrX:123980346 | G | A | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-163+18490G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123980346 | |||||||
| chrX:123980349 | A | G | 4 | a0001c0001t0001g0051 a0001c0001t0001g0140 a0001c0001t0001g0142 others(1): Show |
4 | HG00639.hp1 HG01361.hp2 HG02683.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+18493A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123980349 | |||||||
| chrX:123980587 | G | A | 5 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(2): Show |
5 | HG02257.hp2 HG02258.hp1 HG02723.hp1 others(2): Show |
intron_variant | MODIFIER | c.-163+18731G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123980587 | |||||||
| chrX:123980814 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+18958A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123980814 | |||||||
| chrX:123981730 | G | A | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-163+19874G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123981730 | |||||||
| chrX:123982061 | C | T | 1 | a0001c0001t0001g0213 | 1 | NA21309.hp2 | intron_variant | MODIFIER | c.-163+20205C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982061 | |||||||
| chrX:123982127 | G | A | 5 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(2): Show |
5 | HG02257.hp2 HG02258.hp1 HG02723.hp1 others(2): Show |
intron_variant | MODIFIER | c.-163+20271G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982127 | |||||||
| chrX:123982176 | T | TA | 19 | a0001c0001t0001g0020 a0001c0001t0001g0070 a0001c0001t0001g0116 others(16): Show |
19 | HG00597.hp1 HG00621.hp1 HG01123.hp1 others(16): Show |
intron_variant | MODIFIER | c.-163+20338dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123982176 | ||||||
| chrX:123982438 | G | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+20582G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982438 | |||||||
| chrX:123982460 | C | T | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-163+20604C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982460 | |||||||
| chrX:123982731 | A | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+20875A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982731 | |||||||
| chrX:123982734 | CT | C | 6 | a0001c0001t0001g0092 a0001c0001t0001g0185 a0001c0001t0001g0186 others(3): Show |
6 | HG02257.hp2 HG02258.hp1 HG02723.hp1 others(3): Show |
intron_variant | MODIFIER | c.-163+20893delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123982734 | ||||||
| chrX:123982762 | G | T | 1 | a0001c0001t0002g0039 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.-163+20906G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982762 | |||||||
| chrX:123982763 | C | G | 1 | a0001c0001t0002g0039 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.-163+20907C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982763 | |||||||
| chrX:123982765 | CT | C | 268 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(265): Show |
269 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(266): Show |
intron_variant | MODIFIER | c.-163+20923delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123982765 | ||||||
| chrX:123982766 | T | C | 1 | a0001c0001t0002g0039 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.-163+20910T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982766 | |||||||
| chrX:123982795 | A | C | 5 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(2): Show |
5 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(2): Show |
intron_variant | MODIFIER | c.-163+20939A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123982795 | |||||||
| chrX:123983042 | C | T | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.-163+21186C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123983042 | |||||||
| chrX:123983139 | A | G | 2 | a0001c0001t0001g0054 a0001c0001t0001g0055 |
2 | HG01891.hp2 HG03139.hp1 |
intron_variant | MODIFIER | c.-163+21283A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123983139 | |||||||
| chrX:123983231 | C | CT | 13 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0054 others(10): Show |
13 | HG01243.hp1 HG01496.hp1 HG01884.hp2 others(10): Show |
intron_variant | MODIFIER | c.-163+21387dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983231 | ||||||
| chrX:123983259 | C | T | 16 | a0001c0001t0001g0073 a0001c0001t0001g0203 a0001c0001t0001g0204 others(13): Show |
16 | HG00639.hp2 HG01081.hp1 HG01361.hp1 others(13): Show |
intron_variant | MODIFIER | c.-163+21403C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123983259 | |||||||
| chrX:123983439 | A | T | 1 | a0001c0001t0001g0267 | 1 | NA19081.hp2 | intron_variant | MODIFIER | c.-163+21583A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123983439 | |||||||
| chrX:123983648 | A | G | 1 | a0001c0001t0001g0163 | 1 | HG02257.hp1 | intron_variant | MODIFIER | c.-163+21792A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123983648 | |||||||
| chrX:123983952 | A | C | 1 | a0001c0001t0001g0245 | 1 | HG01346.hp2 | intron_variant | MODIFIER | c.-163+22096A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123983952 | |||||||
| chrX:123983974 | C | CTTTTCTT others(3): Show |
10 | a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0207 others(7): Show |
10 | HG00639.hp2 HG02055.hp1 HG02109.hp2 others(7): Show |
intron_variant | MODIFIER | c.-163+22122_-163+22 others(16): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTCTT others(4): Show |
1 | a0001c0001t0001g0209 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.-163+22122_-163+22 others(17): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(2): Show |
11 | a0001c0001t0001g0049 a0001c0001t0001g0184 a0001c0001t0001g0191 others(8): Show |
11 | HG02080.hp1 HG02165.hp1 HG02559.hp2 others(8): Show |
intron_variant | MODIFIER | c.-163+22131_-163+22 others(15): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(3): Show |
37 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0089 others(34): Show |
37 | HG00438.hp2 HG01361.hp1 HG01884.hp1 others(34): Show |
intron_variant | MODIFIER | c.-163+22130_-163+22 others(16): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(4): Show |
16 | a0001c0001t0001g0114 a0001c0001t0001g0195 a0001c0001t0001g0217 others(13): Show |
16 | HG01175.hp1 HG01257.hp1 HG01258.hp1 others(13): Show |
intron_variant | MODIFIER | c.-163+22129_-163+22 others(17): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(5): Show |
1 | a0001c0001t0001g0241 | 1 | NA18988.hp1 | intron_variant | MODIFIER | c.-163+22128_-163+22 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(7): Show |
1 | a0001c0001t0002g0214 | 1 | NA19006.hp1 | intron_variant | MODIFIER | c.-163+22126_-163+22 others(20): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(9): Show |
5 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0174 others(2): Show |
5 | HG01952.hp1 HG02257.hp2 HG02809.hp1 others(2): Show |
intron_variant | MODIFIER | c.-163+22124_-163+22 others(22): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(10): Show |
2 | a0001c0001t0001g0170 a0001c0001t0001g0171 |
2 | HG02647.hp1 HG02896.hp2 |
intron_variant | MODIFIER | c.-163+22123_-163+22 others(23): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(11): Show |
2 | a0001c0001t0001g0173 a0001c0001t0001g0177 |
2 | HG02280.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-163+22122_-163+22 others(24): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(14): Show |
2 | a0001c0001t0001g0176 a0001c0001t0001g0270 |
2 | HG02280.hp1 HG02818.hp2 |
intron_variant | MODIFIER | c.-163+22119_-163+22 others(27): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | CTTTTTTT others(16): Show |
2 | a0001c0001t0001g0074 a0001c0001t0001g0164 |
2 | HG02818.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.-163+22139_-163+22 others(29): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | C | T | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.-163+22118C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123983974 | |||||||
| chrX:123983974 | CT | C | 17 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0054 others(14): Show |
17 | HG01099.hp1 HG01243.hp1 HG01496.hp1 others(14): Show |
intron_variant | MODIFIER | c.-163+22139delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | CTTTT | C | 6 | a0001c0001t0001g0086 a0001c0001t0001g0192 a0001c0001t0001g0196 others(3): Show |
6 | HG00621.hp1 NA18943.hp1 NA18945.hp1 others(3): Show |
intron_variant | MODIFIER | c.-163+22136_-163+22 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983974 | CTTTTTT | C | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.-163+22134_-163+22 others(12): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123983974 | ||||||
| chrX:123983980 | T | C | 1 | a0001c0001t0001g0068 | 1 | HG01243.hp1 | intron_variant | MODIFIER | c.-163+22124T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123983980 | |||||||
| chrX:123984000 | C | T | 1 | a0001c0001t0001g0113 | 1 | HG01256.hp1 | intron_variant | MODIFIER | c.-163+22144C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123984000 | |||||||
| chrX:123984225 | G | A | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.-163+22369G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123984225 | |||||||
| chrX:123984385 | A | G | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-163+22529A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123984385 | |||||||
| chrX:123984490 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+22634C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123984490 | |||||||
| chrX:123984547 | G | T | 1 | a0001c0001t0001g0153 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.-163+22691G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123984547 | |||||||
| chrX:123984781 | G | A | 1 | a0001c0001t0001g0228 | 1 | NA19090.hp2 | intron_variant | MODIFIER | c.-163+22925G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123984781 | |||||||
| chrX:123984941 | C | T | 1 | a0001c0001t0001g0129 | 1 | NA18999.hp2 | intron_variant | MODIFIER | c.-163+23085C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123984941 | |||||||
| chrX:123985317 | C | T | 2 | a0001c0001t0001g0194 a0001c0001t0001g0195 |
2 | HG02895.hp1 HG02897.hp2 |
intron_variant | MODIFIER | c.-163+23461C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123985317 | |||||||
| chrX:123985340 | C | T | 42 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(39): Show |
42 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(39): Show |
intron_variant | MODIFIER | c.-163+23484C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123985340 | |||||||
| chrX:123985418 | A | G | 1 | a0001c0001t0002g0036 | 1 | HG00609.hp1 | intron_variant | MODIFIER | c.-163+23562A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123985418 | |||||||
| chrX:123985533 | T | C | 1 | a0001c0001t0001g0054 | 1 | HG01891.hp2 | intron_variant | MODIFIER | c.-163+23677T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123985533 | |||||||
| chrX:123985615 | C | A | 1 | a0001c0001t0001g0182 | 1 | NA18999.hp1 | intron_variant | MODIFIER | c.-163+23759C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123985615 | |||||||
| chrX:123985718 | G | A | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.-163+23862G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123985718 | |||||||
| chrX:123985726 | G | A | 237 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(234): Show |
238 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(235): Show |
intron_variant | MODIFIER | c.-163+23870G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123985726 | |||||||
| chrX:123985797 | C | T | 1 | a0001c0001t0001g0228 | 1 | NA19090.hp2 | intron_variant | MODIFIER | c.-163+23941C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123985797 | |||||||
| chrX:123986032 | C | G | 1 | a0001c0001t0004g0035 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.-163+24176C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123986032 | |||||||
| chrX:123986043 | T | C | 1 | a0001c0001t0001g0259 | 1 | HG03831.hp1 | intron_variant | MODIFIER | c.-163+24187T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123986043 | |||||||
| chrX:123986052 | A | T | 5 | a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 others(2): Show |
5 | NA18975.hp2 NA18979.hp1 NA19000.hp1 others(2): Show |
intron_variant | MODIFIER | c.-163+24196A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123986052 | |||||||
| chrX:123986991 | A | T | 3 | a0001c0001t0001g0089 a0001c0001t0001g0164 a0001c0001t0001g0265 |
3 | HG00438.hp2 HG02451.hp2 HG02818.hp1 |
intron_variant | MODIFIER | c.-163+25135A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123986991 | |||||||
| chrX:123986992 | T | A | 1 | a0001c0001t0001g0144 | 1 | HG00597.hp2 | intron_variant | MODIFIER | c.-163+25136T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123986992 | |||||||
| chrX:123987149 | T | C | 237 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(234): Show |
238 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(235): Show |
intron_variant | MODIFIER | c.-163+25293T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123987149 | |||||||
| chrX:123987218 | C | G | 1 | a0001c0001t0002g0039 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.-163+25362C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123987218 | |||||||
| chrX:123987270 | G | C | 1 | a0001c0001t0001g0094 | 1 | HG03130.hp1 | intron_variant | MODIFIER | c.-163+25414G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123987270 | |||||||
| chrX:123988009 | A | G | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-163+26153A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123988009 | |||||||
| chrX:123988440 | G | A | 1 | a0001c0001t0001g0055 | 1 | HG03139.hp1 | intron_variant | MODIFIER | c.-163+26584G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123988440 | |||||||
| chrX:123989235 | TG | T | 42 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(39): Show |
42 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(39): Show |
intron_variant | MODIFIER | c.-163+27380delG | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123989235 | |||||||
| chrX:123989583 | T | C | 1 | a0001c0001t0001g0114 | 1 | HG04184.hp2 | intron_variant | MODIFIER | c.-163+27727T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123989583 | |||||||
| chrX:123989607 | C | CT | 6 | a0001c0001t0001g0137 a0001c0001t0001g0185 a0001c0001t0002g0042 others(3): Show |
6 | HG02257.hp2 NA18975.hp2 NA18979.hp1 others(3): Show |
intron_variant | MODIFIER | c.-163+27766dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123989607 | ||||||
| chrX:123989801 | G | A | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.-163+27945G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123989801 | |||||||
| chrX:123989957 | G | A | 1 | a0001c0001t0001g0117 | 1 | HG01358.hp1 | intron_variant | MODIFIER | c.-163+28101G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123989957 | |||||||
| chrX:123990285 | T | C | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.-163+28429T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990285 | |||||||
| chrX:123990286 | T | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+28430T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990286 | |||||||
| chrX:123990357 | A | G | 42 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(39): Show |
42 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(39): Show |
intron_variant | MODIFIER | c.-163+28501A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990357 | |||||||
| chrX:123990465 | A | C | 1 | a0001c0001t0001g0052 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.-163+28609A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990465 | |||||||
| chrX:123990466 | G | A | 1 | a0001c0001t0001g0052 | 1 | NA18967.hp1 | intron_variant | MODIFIER | c.-163+28610G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990466 | |||||||
| chrX:123990676 | A | G | 2 | a0001c0001t0002g0034 a0001c0001t0002g0043 |
2 | HG01515.hp1 HG01517.hp2 |
intron_variant | MODIFIER | c.-163+28820A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990676 | |||||||
| chrX:123990686 | G | C | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-163+28830G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990686 | |||||||
| chrX:123990790 | C | T | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-163+28934C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990790 | |||||||
| chrX:123990805 | G | A | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-163+28949G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990805 | |||||||
| chrX:123990817 | C | G | 2 | a0001c0001t0001g0074 a0001c0003t0001g0075 |
2 | HG02886.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.-163+28961C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990817 | |||||||
| chrX:123990933 | T | C | 31 | a0001c0001t0001g0001 a0001c0001t0001g0050 a0001c0001t0001g0076 others(28): Show |
32 | HG00597.hp2 HG01358.hp1 HG01496.hp2 others(29): Show |
intron_variant | MODIFIER | c.-163+29077T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990933 | |||||||
| chrX:123990986 | G | C | 1 | a0001c0001t0001g0118 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.-163+29130G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123990986 | |||||||
| chrX:123991223 | T | C | 1 | a0001c0001t0001g0155 | 1 | NA19067.hp1 | intron_variant | MODIFIER | c.-163+29367T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123991223 | |||||||
| chrX:123991248 | G | A | 2 | a0001c0001t0001g0194 a0001c0001t0001g0195 |
2 | HG02895.hp1 HG02897.hp2 |
intron_variant | MODIFIER | c.-163+29392G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123991248 | |||||||
| chrX:123991357 | A | AT | 7 | a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 others(4): Show |
7 | HG01167.hp1 HG02056.hp1 HG02280.hp1 others(4): Show |
intron_variant | MODIFIER | c.-163+29514dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123991357 | ||||||
| chrX:123991439 | G | A | 1 | a0001c0001t0002g0016 | 1 | HG03490.hp1 | intron_variant | MODIFIER | c.-163+29583G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123991439 | |||||||
| chrX:123991496 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-163+29640G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123991496 | |||||||
| chrX:123991666 | C | CT | 11 | a0001c0001t0001g0050 a0001c0001t0001g0102 a0001c0001t0001g0103 others(8): Show |
11 | HG01081.hp2 HG01167.hp1 HG01496.hp2 others(8): Show |
intron_variant | MODIFIER | c.-162-29686dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123991666 | ||||||
| chrX:123991801 | A | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-162-29566A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123991801 | |||||||
| chrX:123991861 | T | TAGTAGAG others(3): Show |
4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-162-29506_-162-29 others(16): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123991861 | |||||||
| chrX:123991862 | C | G | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-162-29505C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123991862 | |||||||
| chrX:123992047 | A | G | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.-162-29320A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123992047 | |||||||
| chrX:123992505 | T | C | 3 | a0001c0001t0001g0129 a0001c0001t0001g0154 a0001c0001t0001g0157 |
3 | HG00673.hp1 HG02015.hp1 NA18999.hp2 |
intron_variant | MODIFIER | c.-162-28862T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123992505 | |||||||
| chrX:123992647 | T | A | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.-162-28720T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123992647 | |||||||
| chrX:123992730 | G | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-28637G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123992730 | |||||||
| chrX:123992805 | G | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-162-28562G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123992805 | |||||||
| chrX:123993031 | TG | T | 4 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(1): Show |
4 | HG02451.hp1 HG02622.hp1 HG03540.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-28333delG | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123993031 | ||||||
| chrX:123993226 | GAGGCTGA others(13): Show |
G | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-162-28138_-162-28 others(26): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123993226 | ||||||
| chrX:123993595 | G | T | 1 | a0001c0001t0001g0136 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.-162-27772G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123993595 | |||||||
| chrX:123993810 | A | G | 13 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0054 others(10): Show |
13 | HG01243.hp1 HG01496.hp1 HG01884.hp2 others(10): Show |
intron_variant | MODIFIER | c.-162-27557A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123993810 | |||||||
| chrX:123993921 | G | A | 1 | a0001c0001t0001g0076 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-162-27446G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123993921 | |||||||
| chrX:123994016 | C | T | 9 | a0001c0001t0001g0051 a0001c0001t0001g0142 a0001c0001t0001g0168 others(6): Show |
9 | HG00639.hp1 HG01952.hp1 HG02280.hp2 others(6): Show |
intron_variant | MODIFIER | c.-162-27351C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123994016 | |||||||
| chrX:123994187 | A | G | 60 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(57): Show |
60 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(57): Show |
intron_variant | MODIFIER | c.-162-27180A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123994187 | |||||||
| chrX:123995147 | A | G | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-162-26220A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123995147 | |||||||
| chrX:123995196 | A | G | 5 | a0001c0001t0001g0068 a0001c0001t0001g0074 a0001c0001t0001g0169 others(2): Show |
5 | HG01243.hp1 HG02886.hp1 HG02896.hp2 others(2): Show |
intron_variant | MODIFIER | c.-162-26171A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123995196 | |||||||
| chrX:123995209 | A | G | 1 | a0001c0001t0001g0273 | 1 | HG00558.hp2 | intron_variant | MODIFIER | c.-162-26158A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123995209 | |||||||
| chrX:123995383 | T | G | 1 | a0001c0001t0001g0213 | 1 | NA21309.hp2 | intron_variant | MODIFIER | c.-162-25984T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123995383 | |||||||
| chrX:123995423 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-25944A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123995423 | |||||||
| chrX:123995563 | G | A | 170 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(167): Show |
170 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(167): Show |
intron_variant | MODIFIER | c.-162-25804G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123995563 | |||||||
| chrX:123995567 | G | A | 170 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(167): Show |
170 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(167): Show |
intron_variant | MODIFIER | c.-162-25800G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123995567 | |||||||
| chrX:123995695 | GA | G | 10 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(7): Show |
10 | HG01496.hp1 HG01884.hp2 HG02630.hp2 others(7): Show |
intron_variant | MODIFIER | c.-162-25662delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123995695 | ||||||
| chrX:123995739 | C | T | 2 | a0001c0001t0001g0185 a0001c0001t0001g0246 |
2 | HG02257.hp2 HG03195.hp2 |
intron_variant | MODIFIER | c.-162-25628C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123995739 | |||||||
| chrX:123996196 | T | G | 1 | a0001c0001t0001g0076 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-162-25171T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123996196 | |||||||
| chrX:123996203 | G | A | 5 | a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 others(2): Show |
5 | NA18975.hp2 NA18979.hp1 NA19000.hp1 others(2): Show |
intron_variant | MODIFIER | c.-162-25164G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123996203 | |||||||
| chrX:123996309 | A | G | 1 | a0001c0001t0001g0181 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-162-25058A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123996309 | |||||||
| chrX:123996419 | C | G | 3 | a0001c0001t0001g0088 a0001c0001t0001g0101 a0001c0001t0001g0178 |
3 | HG02109.hp1 HG02809.hp2 HG03540.hp2 |
intron_variant | MODIFIER | c.-162-24948C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123996419 | |||||||
| chrX:123996548 | T | C | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.-162-24819T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123996548 | |||||||
| chrX:123996558 | A | T | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.-162-24809A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123996558 | |||||||
| chrX:123996565 | G | A | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-162-24802G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123996565 | |||||||
| chrX:123996748 | T | C | 1 | a0001c0001t0001g0064 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.-162-24619T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123996748 | |||||||
| chrX:123997181 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-162-24186C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123997181 | |||||||
| chrX:123997389 | G | A | 272 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(269): Show |
273 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(270): Show |
intron_variant | MODIFIER | c.-162-23978G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123997389 | |||||||
| chrX:123997664 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-23703G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123997664 | |||||||
| chrX:123997753 | G | A | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-23614G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123997753 | |||||||
| chrX:123997892 | C | T | 4 | a0001c0001t0001g0051 a0001c0001t0001g0140 a0001c0001t0001g0142 others(1): Show |
4 | HG00639.hp1 HG01361.hp2 HG02683.hp2 others(1): Show |
intron_variant | MODIFIER | c.-162-23475C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123997892 | |||||||
| chrX:123997940 | C | A | 1 | a0001c0001t0001g0264 | 1 | NA18968.hp1 | intron_variant | MODIFIER | c.-162-23427C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123997940 | |||||||
| chrX:123998168 | A | AT | 27 | a0001c0001t0001g0007 a0001c0001t0001g0054 a0001c0001t0001g0055 others(24): Show |
27 | HG00597.hp1 HG01891.hp2 HG01952.hp1 others(24): Show |
intron_variant | MODIFIER | c.-162-23181dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123998168 | ||||||
| chrX:123998390 | C | T | 1 | a0001c0001t0001g0249 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.-162-22977C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123998390 | |||||||
| chrX:123998587 | C | CATCT | 16 | a0001c0001t0001g0013 a0001c0001t0001g0066 a0001c0001t0001g0067 others(13): Show |
16 | HG00735.hp1 HG00738.hp1 HG01069.hp1 others(13): Show |
intron_variant | MODIFIER | c.-162-22734_-162-22 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123998587 | ||||||
| chrX:123998587 | CATCT | C | 144 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(141): Show |
144 | HG00140.hp1 HG00438.hp1 HG00438.hp2 others(141): Show |
intron_variant | MODIFIER | c.-162-22734_-162-22 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123998587 | ||||||
| chrX:123998587 | CATCTATC others(1): Show |
C | 61 | a0001c0001t0001g0068 a0001c0001t0001g0073 a0001c0001t0001g0076 others(58): Show |
61 | HG00280.hp1 HG00621.hp1 HG00639.hp2 others(58): Show |
intron_variant | MODIFIER | c.-162-22738_-162-22 others(14): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123998587 | ||||||
| chrX:123998587 | CATCTATC others(5): Show |
C | 4 | a0001c0001t0001g0118 a0001c0001t0001g0203 a0001c0001t0001g0209 others(1): Show |
4 | HG02486.hp1 HG02572.hp1 HG04199.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-22742_-162-22 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123998587 | ||||||
| chrX:123998587 | CATCTATC others(9): Show |
C | 1 | a0001c0001t0001g0228 | 1 | NA19090.hp2 | intron_variant | MODIFIER | c.-162-22746_-162-22 others(22): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123998587 | ||||||
| chrX:123998613 | T | G | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.-162-22754T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123998613 | |||||||
| chrX:123998633 | T | A | 8 | a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0019 others(5): Show |
8 | HG00140.hp1 HG00735.hp2 HG01257.hp2 others(5): Show |
intron_variant | MODIFIER | c.-162-22734T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123998633 | |||||||
| chrX:123998892 | G | A | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.-162-22475G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123998892 | |||||||
| chrX:123999065 | C | T | 2 | a0001c0001t0001g0081 a0001c0001t0001g0151 |
2 | NA18949.hp2 NA18982.hp1 |
intron_variant | MODIFIER | c.-162-22302C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999065 | |||||||
| chrX:123999134 | A | G | 82 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0100 others(79): Show |
82 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(79): Show |
intron_variant | MODIFIER | c.-162-22233A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999134 | |||||||
| chrX:123999414 | T | TCTCCCTC others(15): Show |
1 | a0001c0001t0005g0087 | 1 | NA18941.hp2 | intron_variant | MODIFIER | c.-162-21947_-162-21 others(28): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 123999414 | ||||||
| chrX:123999425 | C | A | 1 | a0001c0001t0001g0220 | 1 | HG01123.hp1 | intron_variant | MODIFIER | c.-162-21942C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999425 | |||||||
| chrX:123999515 | C | T | 1 | a0001c0001t0001g0191 | 1 | NA19065.hp1 | intron_variant | MODIFIER | c.-162-21852C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999515 | |||||||
| chrX:123999609 | T | A | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-162-21758T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999609 | |||||||
| chrX:123999704 | T | G | 1 | a0001c0001t0002g0024 | 1 | HG01257.hp2 | intron_variant | MODIFIER | c.-162-21663T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999704 | |||||||
| chrX:123999910 | G | A | 1 | a0001c0001t0002g0071 | 1 | HG00558.hp1 | intron_variant | MODIFIER | c.-162-21457G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999910 | |||||||
| chrX:123999925 | T | A | 43 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(40): Show |
43 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(40): Show |
intron_variant | MODIFIER | c.-162-21442T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999925 | |||||||
| chrX:123999935 | T | A | 23 | a0001c0001t0001g0072 a0001c0001t0001g0078 a0001c0001t0001g0102 others(20): Show |
23 | HG00558.hp2 HG00642.hp1 HG00673.hp1 others(20): Show |
intron_variant | MODIFIER | c.-162-21432T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 123999935 | |||||||
| chrX:124000129 | G | T | 1 | a0001c0001t0002g0057 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.-162-21238G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124000129 | |||||||
| chrX:124000146 | G | A | 83 | a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(80): Show |
83 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(80): Show |
intron_variant | MODIFIER | c.-162-21221G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124000146 | |||||||
| chrX:124000380 | C | G | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-20987C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124000380 | |||||||
| chrX:124000472 | T | C | 1 | a0001c0001t0001g0226 | 1 | HG02165.hp1 | intron_variant | MODIFIER | c.-162-20895T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124000472 | |||||||
| chrX:124000520 | A | C | 1 | a0001c0001t0001g0126 | 1 | NA19087.hp1 | intron_variant | MODIFIER | c.-162-20847A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124000520 | |||||||
| chrX:124000925 | A | T | 43 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(40): Show |
43 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(40): Show |
intron_variant | MODIFIER | c.-162-20442A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124000925 | |||||||
| chrX:124001095 | T | A | 1 | a0001c0001t0001g0232 | 1 | NA18947.hp1 | intron_variant | MODIFIER | c.-162-20272T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124001095 | |||||||
| chrX:124001216 | G | A | 2 | a0001c0001t0001g0092 a0001c0001t0001g0155 |
2 | NA18948.hp1 NA19067.hp1 |
intron_variant | MODIFIER | c.-162-20151G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124001216 | |||||||
| chrX:124001247 | C | T | 3 | a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 |
3 | HG01167.hp1 HG02965.hp1 HG03486.hp2 |
intron_variant | MODIFIER | c.-162-20120C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124001247 | |||||||
| chrX:124001450 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-19917A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124001450 | |||||||
| chrX:124001586 | T | C | 1 | a0001c0001t0002g0132 | 1 | HG01255.hp1 | intron_variant | MODIFIER | c.-162-19781T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124001586 | |||||||
| chrX:124001839 | T | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-19528T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124001839 | |||||||
| chrX:124002004 | G | T | 1 | a0001c0001t0001g0240 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.-162-19363G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124002004 | |||||||
| chrX:124002070 | A | C | 1 | a0001c0001t0001g0211 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.-162-19297A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124002070 | |||||||
| chrX:124002320 | T | A | 1 | a0001c0001t0001g0095 | 1 | HG02135.hp1 | intron_variant | MODIFIER | c.-162-19047T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124002320 | |||||||
| chrX:124002339 | C | T | 5 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(2): Show |
5 | HG01884.hp2 HG02630.hp2 HG02976.hp1 others(2): Show |
intron_variant | MODIFIER | c.-162-19028C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124002339 | |||||||
| chrX:124002353 | C | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-162-19014C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124002353 | |||||||
| chrX:124002811 | TC | T | 3 | a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0163 |
3 | HG02257.hp1 HG02615.hp1 HG02622.hp2 |
intron_variant | MODIFIER | c.-162-18555delC | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124002811 | |||||||
| chrX:124002812 | C | CT | 16 | a0001c0001t0001g0068 a0001c0001t0001g0102 a0001c0001t0001g0103 others(13): Show |
16 | HG00609.hp1 HG01081.hp2 HG01167.hp1 others(13): Show |
intron_variant | MODIFIER | c.-162-18540dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124002812 | ||||||
| chrX:124002949 | C | A | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.-162-18418C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124002949 | |||||||
| chrX:124003157 | A | T | 5 | a0001c0001t0001g0076 a0001c0001t0001g0081 a0001c0001t0001g0098 others(2): Show |
5 | HG01934.hp1 HG02083.hp1 NA18949.hp2 others(2): Show |
intron_variant | MODIFIER | c.-162-18210A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124003157 | |||||||
| chrX:124003308 | G | A | 2 | a0001c0001t0001g0261 a0001c0001t0002g0257 |
2 | NA18950.hp1 NA19003.hp1 |
intron_variant | MODIFIER | c.-162-18059G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124003308 | |||||||
| chrX:124003402 | G | A | 49 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(46): Show |
49 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show |
intron_variant | MODIFIER | c.-162-17965G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124003402 | |||||||
| chrX:124003476 | C | T | 4 | a0001c0001t0002g0014 a0001c0001t0002g0023 a0001c0001t0002g0039 others(1): Show |
4 | HG00140.hp1 HG00735.hp2 HG02056.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-17891C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124003476 | |||||||
| chrX:124003502 | C | A | 83 | a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(80): Show |
83 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(80): Show |
intron_variant | MODIFIER | c.-162-17865C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124003502 | |||||||
| chrX:124003704 | G | T | 1 | a0001c0001t0002g0024 | 1 | HG01257.hp2 | intron_variant | MODIFIER | c.-162-17663G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124003704 | |||||||
| chrX:124003713 | C | T | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.-162-17654C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124003713 | |||||||
| chrX:124003979 | T | A | 1 | a0001c0001t0001g0136 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.-162-17388T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124003979 | |||||||
| chrX:124004369 | A | T | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-162-16998A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124004369 | |||||||
| chrX:124004448 | T | C | 1 | a0001c0001t0001g0189 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.-162-16919T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124004448 | |||||||
| chrX:124004591 | C | CCATT | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.-162-16767_-162-16 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124004591 | ||||||
| chrX:124004727 | G | A | 14 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 others(11): Show |
14 | HG01106.hp1 HG01243.hp1 HG01496.hp1 others(11): Show |
intron_variant | MODIFIER | c.-162-16640G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124004727 | |||||||
| chrX:124004750 | T | C | 1 | a0001c0001t0002g0042 | 1 | NA19077.hp1 | intron_variant | MODIFIER | c.-162-16617T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124004750 | |||||||
| chrX:124004751 | C | T | 1 | a0001c0001t0002g0042 | 1 | NA19077.hp1 | intron_variant | MODIFIER | c.-162-16616C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124004751 | |||||||
| chrX:124004752 | T | C | 1 | a0001c0001t0002g0042 | 1 | NA19077.hp1 | intron_variant | MODIFIER | c.-162-16615T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124004752 | |||||||
| chrX:124004914 | A | G | 7 | a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 others(4): Show |
7 | HG00621.hp1 HG02129.hp1 NA18941.hp1 others(4): Show |
intron_variant | MODIFIER | c.-162-16453A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124004914 | |||||||
| chrX:124005001 | CTTAAGT | C | 5 | a0001c0001t0001g0217 a0001c0001t0001g0239 a0001c0001t0001g0241 others(2): Show |
5 | NA18981.hp2 NA18988.hp1 NA18989.hp1 others(2): Show |
intron_variant | MODIFIER | c.-162-16362_-162-16 others(12): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124005001 | ||||||
| chrX:124005079 | C | T | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.-162-16288C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124005079 | |||||||
| chrX:124005367 | T | A | 1 | a0001c0001t0001g0048 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.-162-16000T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124005367 | |||||||
| chrX:124005853 | T | C | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-162-15514T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124005853 | |||||||
| chrX:124005976 | G | A | 2 | a0001c0001t0001g0236 a0001c0001t0001g0244 |
2 | HG03654.hp1 HG04184.hp1 |
intron_variant | MODIFIER | c.-162-15391G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124005976 | |||||||
| chrX:124006341 | A | G | 1 | a0001c0001t0001g0076 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-162-15026A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006341 | |||||||
| chrX:124006387 | T | C | 1 | a0001c0001t0001g0184 | 1 | HG02080.hp1 | intron_variant | MODIFIER | c.-162-14980T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006387 | |||||||
| chrX:124006436 | AT | A | 187 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0048 others(184): Show |
188 | HG00438.hp2 HG00558.hp2 HG00597.hp2 others(185): Show |
intron_variant | MODIFIER | c.-162-14911delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124006436 | ||||||
| chrX:124006436 | ATT | A | 11 | a0001c0001t0001g0121 a0001c0001t0001g0159 a0001c0001t0001g0186 others(8): Show |
11 | HG00597.hp1 HG02027.hp1 HG02723.hp1 others(8): Show |
intron_variant | MODIFIER | c.-162-14912_-162-14 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124006436 | ||||||
| chrX:124006436 | ATTT | A | 44 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(41): Show |
44 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(41): Show |
intron_variant | MODIFIER | c.-162-14913_-162-14 others(9): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124006436 | ||||||
| chrX:124006583 | T | G | 1 | a0001c0001t0001g0200 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.-162-14784T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006583 | |||||||
| chrX:124006629 | C | T | 1 | a0001c0001t0001g0020 | 1 | NA19090.hp1 | intron_variant | MODIFIER | c.-162-14738C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006629 | |||||||
| chrX:124006660 | T | C | 46 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(43): Show |
46 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(43): Show |
intron_variant | MODIFIER | c.-162-14707T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006660 | |||||||
| chrX:124006661 | G | C | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-162-14706G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006661 | |||||||
| chrX:124006682 | G | A | 1 | a0001c0001t0002g0223 | 1 | HG02738.hp1 | intron_variant | MODIFIER | c.-162-14685G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006682 | |||||||
| chrX:124006730 | T | C | 2 | a0001c0001t0001g0073 a0001c0001t0001g0099 |
2 | HG02717.hp1 HG03239.hp2 |
intron_variant | MODIFIER | c.-162-14637T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006730 | |||||||
| chrX:124006731 | G | A | 1 | a0001c0001t0001g0073 | 1 | HG02717.hp1 | intron_variant | MODIFIER | c.-162-14636G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006731 | |||||||
| chrX:124006846 | T | C | 1 | a0001c0001t0001g0233 | 1 | NA18962.hp1 | intron_variant | MODIFIER | c.-162-14521T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006846 | |||||||
| chrX:124006862 | T | C | 2 | a0001c0001t0004g0022 a0001c0001t0004g0035 |
2 | HG00597.hp1 NA18960.hp1 |
intron_variant | MODIFIER | c.-162-14505T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006862 | |||||||
| chrX:124006919 | T | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-14448T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006919 | |||||||
| chrX:124006978 | G | T | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.-162-14389G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124006978 | |||||||
| chrX:124007017 | T | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-14350T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124007017 | |||||||
| chrX:124007075 | A | C | 1 | a0001c0001t0001g0114 | 1 | HG04184.hp2 | intron_variant | MODIFIER | c.-162-14292A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124007075 | |||||||
| chrX:124007095 | G | T | 1 | a0001c0001t0001g0233 | 1 | NA18962.hp1 | intron_variant | MODIFIER | c.-162-14272G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124007095 | |||||||
| chrX:124007445 | GT | G | 53 | a0001c0001t0001g0004 a0001c0001t0001g0100 a0001c0001t0001g0181 others(50): Show |
53 | HG00438.hp2 HG01123.hp1 HG01175.hp1 others(50): Show |
intron_variant | MODIFIER | c.-162-13913delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124007445 | ||||||
| chrX:124007555 | A | G | 1 | a0001c0001t0001g0208 | 1 | HG02723.hp2 | intron_variant | MODIFIER | c.-162-13812A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124007555 | |||||||
| chrX:124007764 | T | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-13603T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124007764 | |||||||
| chrX:124007790 | C | T | 9 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(6): Show |
9 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(6): Show |
intron_variant | MODIFIER | c.-162-13577C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124007790 | |||||||
| chrX:124007799 | C | T | 1 | a0001c0001t0002g0030 | 1 | NA18969.hp1 | intron_variant | MODIFIER | c.-162-13568C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124007799 | |||||||
| chrX:124008210 | T | C | 1 | a0001c0001t0001g0076 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.-162-13157T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008210 | |||||||
| chrX:124008215 | C | T | 1 | a0001c0001t0001g0155 | 1 | NA19067.hp1 | intron_variant | MODIFIER | c.-162-13152C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008215 | |||||||
| chrX:124008216 | T | C | 1 | a0001c0001t0001g0155 | 1 | NA19067.hp1 | intron_variant | MODIFIER | c.-162-13151T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008216 | |||||||
| chrX:124008300 | G | A | 1 | a0001c0001t0001g0221 | 1 | NA18955.hp1 | intron_variant | MODIFIER | c.-162-13067G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008300 | |||||||
| chrX:124008353 | A | G | 1 | a0001c0001t0001g0158 | 1 | HG02735.hp1 | intron_variant | MODIFIER | c.-162-13014A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008353 | |||||||
| chrX:124008362 | C | T | 1 | a0001c0001t0001g0164 | 1 | HG02818.hp1 | intron_variant | MODIFIER | c.-162-13005C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008362 | |||||||
| chrX:124008393 | A | G | 3 | a0001c0001t0004g0022 a0001c0001t0004g0032 a0001c0001t0004g0035 |
3 | HG00597.hp1 NA18944.hp1 NA18960.hp1 |
intron_variant | MODIFIER | c.-162-12974A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008393 | |||||||
| chrX:124008718 | A | C | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.-162-12649A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008718 | |||||||
| chrX:124008802 | A | G | 1 | a0001c0001t0001g0122 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.-162-12565A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008802 | |||||||
| chrX:124008907 | T | G | 105 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0048 others(102): Show |
106 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(103): Show |
intron_variant | MODIFIER | c.-162-12460T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008907 | |||||||
| chrX:124008972 | G | A | 1 | a0001c0001t0001g0084 | 1 | HG01993.hp2 | intron_variant | MODIFIER | c.-162-12395G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124008972 | |||||||
| chrX:124009392 | C | CAGGTAGG others(13): Show |
2 | a0001c0001t0001g0055 a0001c0001t0001g0189 |
2 | HG02258.hp1 HG03139.hp1 |
intron_variant | MODIFIER | c.-162-11940_-162-11 others(26): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009392 | ||||||
| chrX:124009392 | CAGGT | C | 74 | a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0064 others(71): Show |
74 | HG00438.hp2 HG00621.hp1 HG00673.hp1 others(71): Show |
intron_variant | MODIFIER | c.-162-11924_-162-11 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009392 | ||||||
| chrX:124009392 | CAGGTAGG others(1): Show |
C | 9 | a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0049 others(6): Show |
9 | HG02559.hp2 HG02818.hp2 HG02976.hp1 others(6): Show |
intron_variant | MODIFIER | c.-162-11928_-162-11 others(14): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009392 | ||||||
| chrX:124009392 | CAGGTAGG others(5): Show |
C | 8 | a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 others(5): Show |
8 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(5): Show |
intron_variant | MODIFIER | c.-162-11932_-162-11 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009392 | ||||||
| chrX:124009427 | G | GTAGA | 4 | a0001c0001t0001g0052 a0001c0001t0001g0083 a0001c0001t0001g0107 others(1): Show |
4 | HG04228.hp1 NA18947.hp2 NA18967.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-11937_-162-11 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009427 | ||||||
| chrX:124009431 | G | A | 9 | a0001c0001t0001g0052 a0001c0001t0001g0082 a0001c0001t0001g0083 others(6): Show |
9 | HG00673.hp1 HG01109.hp1 HG04228.hp1 others(6): Show |
intron_variant | MODIFIER | c.-162-11936G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124009431 | |||||||
| chrX:124009431 | G | GTAGA | 42 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0050 others(39): Show |
43 | HG00597.hp2 HG00639.hp1 HG00642.hp1 others(40): Show |
intron_variant | MODIFIER | c.-162-11933_-162-11 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009431 | ||||||
| chrX:124009431 | G | GTAGATAG others(1): Show |
19 | a0001c0001t0001g0088 a0001c0001t0001g0096 a0001c0001t0001g0103 others(16): Show |
19 | HG00735.hp1 HG01069.hp1 HG01167.hp1 others(16): Show |
intron_variant | MODIFIER | c.-162-11933_-162-11 others(14): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009431 | ||||||
| chrX:124009431 | G | GTAGATAG others(5): Show |
6 | a0001c0001t0001g0079 a0001c0001t0001g0081 a0001c0001t0001g0091 others(3): Show |
6 | HG02165.hp2 HG03239.hp2 NA18950.hp2 others(3): Show |
intron_variant | MODIFIER | c.-162-11933_-162-11 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009431 | ||||||
| chrX:124009431 | G | GTAGATAG others(9): Show |
2 | a0001c0001t0001g0139 a0001c0001t0001g0153 |
2 | HG01433.hp1 NA18991.hp1 |
intron_variant | MODIFIER | c.-162-11933_-162-11 others(22): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009431 | ||||||
| chrX:124009431 | GTAGGTAG others(9): Show |
G | 2 | a0001c0001t0001g0006 a0001c0001t0002g0071 |
2 | HG00558.hp1 HG01346.hp1 |
intron_variant | MODIFIER | c.-162-11932_-162-11 others(22): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009431 | ||||||
| chrX:124009435 | G | A | 85 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0050 others(82): Show |
86 | HG00597.hp2 HG00639.hp1 HG00642.hp1 others(83): Show |
intron_variant | MODIFIER | c.-162-11932G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124009435 | |||||||
| chrX:124009435 | G | GTAGA | 12 | a0001c0001t0001g0102 a0001c0001t0001g0155 a0001c0001t0001g0199 others(9): Show |
12 | HG02055.hp1 HG02486.hp1 HG02896.hp1 others(9): Show |
intron_variant | MODIFIER | c.-162-11929_-162-11 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009435 | ||||||
| chrX:124009435 | G | GTAGATAG others(1): Show |
6 | a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0111 others(3): Show |
6 | HG00558.hp2 HG01099.hp1 HG01943.hp1 others(3): Show |
intron_variant | MODIFIER | c.-162-11929_-162-11 others(14): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009435 | ||||||
| chrX:124009435 | G | GTAGATAG others(5): Show |
2 | a0001c0001t0001g0112 a0001c0001t0001g0148 |
2 | HG01074.hp1 NA20752.hp1 |
intron_variant | MODIFIER | c.-162-11929_-162-11 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009435 | ||||||
| chrX:124009435 | G | GTAGATAG others(9): Show |
1 | a0001c0001t0001g0124 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.-162-11929_-162-11 others(22): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009435 | ||||||
| chrX:124009435 | GTAGGTAG others(5): Show |
G | 35 | a0001c0001t0001g0007 a0001c0001t0001g0020 a0001c0001t0001g0048 others(32): Show |
35 | HG00140.hp1 HG00438.hp1 HG00597.hp1 others(32): Show |
intron_variant | MODIFIER | c.-162-11928_-162-11 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009435 | ||||||
| chrX:124009435 | GTAGGTAG others(9): Show |
G | 1 | a0001c0001t0002g0260 | 1 | NA19064.hp2 | intron_variant | MODIFIER | c.-162-11928_-162-11 others(22): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009435 | ||||||
| chrX:124009439 | G | A | 130 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0010 others(127): Show |
131 | HG00558.hp2 HG00597.hp2 HG00621.hp1 others(128): Show |
intron_variant | MODIFIER | c.-162-11928G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124009439 | |||||||
| chrX:124009439 | G | GTAGA | 3 | a0001c0001t0001g0186 a0001c0001t0001g0190 a0001c0001t0001g0196 |
3 | HG01884.hp1 HG02723.hp1 NA18964.hp2 |
intron_variant | MODIFIER | c.-162-11925_-162-11 others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009439 | ||||||
| chrX:124009439 | G | GTAGATAG others(5): Show |
1 | a0001c0001t0001g0126 | 1 | NA19087.hp1 | intron_variant | MODIFIER | c.-162-11925_-162-11 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009439 | ||||||
| chrX:124009439 | G | GTAGATAG others(9): Show |
1 | a0001c0001t0001g0188 | 1 | HG03486.hp1 | intron_variant | MODIFIER | c.-162-11925_-162-11 others(22): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009439 | ||||||
| chrX:124009439 | GTAGGTAG others(1): Show |
G | 6 | a0001c0001t0001g0185 a0001c0001t0002g0024 a0001c0001t0002g0029 others(3): Show |
6 | HG01257.hp2 HG02080.hp2 HG02257.hp2 others(3): Show |
intron_variant | MODIFIER | c.-162-11924_-162-11 others(14): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009439 | ||||||
| chrX:124009443 | G | A | 210 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(207): Show |
211 | HG00438.hp2 HG00558.hp2 HG00597.hp2 others(208): Show |
intron_variant | MODIFIER | c.-162-11924G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124009443 | |||||||
| chrX:124009443 | G | GTAGATAG others(5): Show |
1 | a0001c0001t0001g0201 | 1 | NA18941.hp1 | intron_variant | MODIFIER | c.-162-11901_-162-11 others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009443 | ||||||
| chrX:124009443 | G | GTAGATAG others(9): Show |
1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-11905_-162-11 others(22): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009443 | ||||||
| chrX:124009443 | G | GTAGGTAG others(21): Show |
1 | a0001c0001t0001g0193 | 1 | HG02129.hp1 | intron_variant | MODIFIER | c.-162-11921_-162-11 others(34): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124009443 | ||||||
| chrX:124009447 | A | G | 1 | a0001c0001t0001g0189 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.-162-11920A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124009447 | |||||||
| chrX:124009451 | A | G | 1 | a0001c0001t0001g0189 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.-162-11916A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124009451 | |||||||
| chrX:124009455 | A | G | 1 | a0001c0001t0001g0189 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.-162-11912A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124009455 | |||||||
| chrX:124010094 | G | A | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-162-11273G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124010094 | |||||||
| chrX:124010253 | A | T | 58 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(55): Show |
58 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(55): Show |
intron_variant | MODIFIER | c.-162-11114A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124010253 | |||||||
| chrX:124010789 | G | A | 4 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(1): Show |
4 | HG02647.hp1 HG02809.hp1 HG02896.hp2 others(1): Show |
intron_variant | MODIFIER | c.-162-10578G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124010789 | |||||||
| chrX:124010836 | A | G | 1 | a0001c0001t0001g0188 | 1 | HG03486.hp1 | intron_variant | MODIFIER | c.-162-10531A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124010836 | |||||||
| chrX:124011103 | G | C | 59 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(56): Show |
59 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(56): Show |
intron_variant | MODIFIER | c.-162-10264G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124011103 | |||||||
| chrX:124011216 | A | C | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-162-10151A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124011216 | |||||||
| chrX:124011382 | C | T | 271 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(268): Show |
272 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(269): Show |
intron_variant | MODIFIER | c.-162-9985C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124011382 | |||||||
| chrX:124011414 | T | C | 1 | a0001c0001t0001g0202 | 1 | HG02559.hp1 | intron_variant | MODIFIER | c.-162-9953T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124011414 | |||||||
| chrX:124011504 | A | G | 1 | a0001c0001t0001g0004 | 1 | NA18991.hp2 | intron_variant | MODIFIER | c.-162-9863A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124011504 | |||||||
| chrX:124011945 | T | C | 1 | a0001c0001t0001g0131 | 1 | NA18747.hp1 | intron_variant | MODIFIER | c.-162-9422T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124011945 | |||||||
| chrX:124011971 | C | G | 3 | a0001c0001t0001g0190 a0001c0001t0001g0200 a0001c0001t0001g0202 |
3 | HG01884.hp1 HG02559.hp1 HG02922.hp2 |
intron_variant | MODIFIER | c.-162-9396C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124011971 | |||||||
| chrX:124012078 | G | A | 271 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(268): Show |
272 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(269): Show |
intron_variant | MODIFIER | c.-162-9289G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124012078 | |||||||
| chrX:124012100 | G | A | 1 | a0001c0001t0001g0136 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.-162-9267G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124012100 | |||||||
| chrX:124012221 | C | T | 9 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(6): Show |
9 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(6): Show |
intron_variant | MODIFIER | c.-162-9146C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124012221 | |||||||
| chrX:124012484 | T | G | 1 | a0001c0001t0001g0114 | 1 | HG04184.hp2 | intron_variant | MODIFIER | c.-162-8883T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124012484 | |||||||
| chrX:124013253 | A | G | 1 | a0001c0001t0001g0226 | 1 | HG02165.hp1 | intron_variant | MODIFIER | c.-162-8114A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124013253 | |||||||
| chrX:124013324 | A | AAC | 11 | a0001c0001t0001g0074 a0001c0001t0001g0090 a0001c0001t0001g0168 others(8): Show |
11 | HG01099.hp1 HG01952.hp1 HG02280.hp2 others(8): Show |
intron_variant | MODIFIER | c.-162-8020_-162-801 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124013324 | ||||||
| chrX:124013324 | AAC | A | 53 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(50): Show |
53 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(50): Show |
intron_variant | MODIFIER | c.-162-8020_-162-801 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124013324 | ||||||
| chrX:124013505 | A | G | 1 | a0001c0001t0002g0019 | 1 | HG01993.hp1 | intron_variant | MODIFIER | c.-162-7862A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124013505 | |||||||
| chrX:124013644 | C | T | 2 | a0001c0001t0002g0042 a0001c0001t0002g0044 |
2 | NA18975.hp2 NA19077.hp1 |
intron_variant | MODIFIER | c.-162-7723C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124013644 | |||||||
| chrX:124013661 | C | A | 5 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(2): Show |
5 | HG02257.hp2 HG02258.hp1 HG02723.hp1 others(2): Show |
intron_variant | MODIFIER | c.-162-7706C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124013661 | |||||||
| chrX:124013722 | CAA | C | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.-162-7644_-162-764 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124013722 | |||||||
| chrX:124014159 | A | T | 260 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(257): Show |
261 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(258): Show |
intron_variant | MODIFIER | c.-162-7208A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124014159 | |||||||
| chrX:124014319 | C | A | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-7048C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124014319 | |||||||
| chrX:124014367 | A | AT | 5 | a0001c0001t0001g0007 a0001c0001t0001g0186 a0001c0001t0001g0188 others(2): Show |
5 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(2): Show |
intron_variant | MODIFIER | c.-162-6987dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124014367 | ||||||
| chrX:124014424 | G | A | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.-162-6943G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124014424 | |||||||
| chrX:124014442 | C | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-6925C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124014442 | |||||||
| chrX:124014677 | T | G | 1 | a0001c0001t0001g0234 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.-162-6690T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124014677 | |||||||
| chrX:124014876 | T | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.-162-6491T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124014876 | |||||||
| chrX:124014934 | A | G | 1 | a0001c0003t0001g0075 | 1 | HG02886.hp1 | intron_variant | MODIFIER | c.-162-6433A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124014934 | |||||||
| chrX:124014979 | C | CT | 171 | a0001c0001t0001g0001 a0001c0001t0001g0048 a0001c0001t0001g0049 others(168): Show |
172 | HG00558.hp2 HG00597.hp1 HG00621.hp1 others(169): Show |
intron_variant | MODIFIER | c.-162-6363dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124014979 | ||||||
| chrX:124014979 | C | CTT | 26 | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0076 others(23): Show |
26 | HG00438.hp2 HG00597.hp2 HG00673.hp1 others(23): Show |
intron_variant | MODIFIER | c.-162-6364_-162-636 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124014979 | ||||||
| chrX:124014979 | C | CTTT | 8 | a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0168 others(5): Show |
8 | HG01952.hp1 HG02148.hp1 HG02280.hp2 others(5): Show |
intron_variant | MODIFIER | c.-162-6365_-162-636 others(7): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124014979 | ||||||
| chrX:124014987 | T | C | 3 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 |
3 | HG02451.hp1 HG02622.hp1 HG03540.hp1 |
intron_variant | MODIFIER | c.-162-6380T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124014987 | |||||||
| chrX:124015009 | C | T | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.-162-6358C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124015009 | |||||||
| chrX:124015073 | A | G | 259 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(256): Show |
260 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(257): Show |
intron_variant | MODIFIER | c.-162-6294A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124015073 | |||||||
| chrX:124015207 | C | T | 1 | a0001c0001t0001g0181 | 1 | HG02698.hp1 | intron_variant | MODIFIER | c.-162-6160C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124015207 | |||||||
| chrX:124015233 | G | A | 2 | a0001c0001t0001g0253 a0001c0001t0001g0254 |
2 | NA19064.hp1 NA19077.hp2 |
intron_variant | MODIFIER | c.-162-6134G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124015233 | |||||||
| chrX:124015388 | CT | C | 6 | a0001c0001t0001g0077 a0001c0001t0001g0190 a0001c0001t0001g0200 others(3): Show |
6 | HG01884.hp1 HG02559.hp1 HG02922.hp2 others(3): Show |
intron_variant | MODIFIER | c.-162-5965delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124015388 | ||||||
| chrX:124015477 | C | T | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.-162-5890C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124015477 | |||||||
| chrX:124015669 | G | T | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-5698G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124015669 | |||||||
| chrX:124015758 | T | C | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-162-5609T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124015758 | |||||||
| chrX:124015956 | T | A | 1 | a0001c0001t0001g0242 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-162-5411T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124015956 | |||||||
| chrX:124016308 | A | G | 2 | a0001c0001t0002g0028 a0001c0001t0002g0053 |
2 | HG02080.hp2 HG02132.hp1 |
intron_variant | MODIFIER | c.-162-5059A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124016308 | |||||||
| chrX:124016370 | A | G | 1 | a0001c0001t0001g0231 | 1 | HG03491.hp2 | intron_variant | MODIFIER | c.-162-4997A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124016370 | |||||||
| chrX:124016426 | T | A | 1 | a0001c0001t0001g0111 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.-162-4941T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124016426 | |||||||
| chrX:124016932 | A | G | 1 | a0001c0001t0001g0268 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.-162-4435A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124016932 | |||||||
| chrX:124017001 | T | C | 4 | a0001c0001t0001g0246 a0001c0002t0001g0062 a0001c0002t0001g0063 others(1): Show |
4 | HG01496.hp1 HG03195.hp2 HG03225.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-4366T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124017001 | |||||||
| chrX:124017095 | C | G | 2 | a0001c0001t0001g0236 a0001c0001t0001g0244 |
2 | HG03654.hp1 HG04184.hp1 |
intron_variant | MODIFIER | c.-162-4272C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124017095 | |||||||
| chrX:124017279 | G | A | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.-162-4088G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124017279 | |||||||
| chrX:124017550 | GA | G | 5 | a0001c0001t0001g0217 a0001c0001t0001g0239 a0001c0001t0001g0241 others(2): Show |
5 | NA18981.hp2 NA18988.hp1 NA18989.hp1 others(2): Show |
intron_variant | MODIFIER | c.-162-3810delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124017550 | ||||||
| chrX:124017569 | C | A | 4 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(1): Show |
4 | HG02451.hp1 HG02622.hp1 HG03540.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-3798C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124017569 | |||||||
| chrX:124018003 | T | C | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.-162-3364T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018003 | |||||||
| chrX:124018057 | G | C | 1 | a0001c0001t0001g0054 | 1 | HG01891.hp2 | intron_variant | MODIFIER | c.-162-3310G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018057 | |||||||
| chrX:124018433 | T | G | 2 | a0001c0001t0002g0034 a0001c0001t0002g0043 |
2 | HG01515.hp1 HG01517.hp2 |
intron_variant | MODIFIER | c.-162-2934T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018433 | |||||||
| chrX:124018446 | T | TTGGA | 6 | a0001c0001t0001g0246 a0001c0001t0002g0025 a0001c0001t0002g0027 others(3): Show |
6 | HG00438.hp1 HG00558.hp1 HG01496.hp1 others(3): Show |
intron_variant | MODIFIER | c.-162-2884_-162-288 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124018446 | ||||||
| chrX:124018446 | T | TTGGATGG others(1): Show |
2 | a0001c0002t0001g0062 a0001c0002t0001g0063 |
2 | HG03225.hp1 NA18906.hp1 |
intron_variant | MODIFIER | c.-162-2888_-162-288 others(12): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124018446 | ||||||
| chrX:124018446 | TTGGA | T | 204 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0008 others(201): Show |
205 | HG00438.hp2 HG00558.hp2 HG00597.hp2 others(202): Show |
intron_variant | MODIFIER | c.-162-2884_-162-288 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124018446 | ||||||
| chrX:124018446 | TTGGATGG others(1): Show |
T | 5 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(2): Show |
5 | HG01891.hp1 HG02258.hp1 HG02723.hp1 others(2): Show |
intron_variant | MODIFIER | c.-162-2888_-162-288 others(12): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124018446 | ||||||
| chrX:124018446 | TTGGATGG others(5): Show |
T | 1 | a0001c0001t0001g0068 | 1 | HG01243.hp1 | intron_variant | MODIFIER | c.-162-2892_-162-288 others(16): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124018446 | ||||||
| chrX:124018483 | T | C | 1 | a0001c0001t0001g0111 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.-162-2884T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018483 | |||||||
| chrX:124018484 | G | A | 1 | a0001c0001t0001g0111 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.-162-2883G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018484 | |||||||
| chrX:124018488 | A | G | 1 | a0001c0001t0001g0111 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.-162-2879A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018488 | |||||||
| chrX:124018494 | A | G | 49 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(46): Show |
49 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show |
intron_variant | MODIFIER | c.-162-2873A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018494 | |||||||
| chrX:124018495 | C | T | 1 | a0001c0001t0001g0111 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.-162-2872C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018495 | |||||||
| chrX:124018581 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.-162-2786G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018581 | |||||||
| chrX:124018637 | T | C | 1 | a0001c0001t0001g0092 | 1 | NA18948.hp1 | intron_variant | MODIFIER | c.-162-2730T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124018637 | |||||||
| chrX:124018872 | AT | A | 82 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(79): Show |
82 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(79): Show |
intron_variant | MODIFIER | c.-162-2493delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124018872 | ||||||
| chrX:124019052 | C | CT | 90 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0009 others(87): Show |
90 | HG00438.hp2 HG00558.hp1 HG00621.hp1 others(87): Show |
intron_variant | MODIFIER | c.-162-2293dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124019052 | ||||||
| chrX:124019052 | C | CTT | 6 | a0001c0001t0001g0196 a0001c0001t0001g0202 a0001c0001t0001g0230 others(3): Show |
6 | HG02559.hp1 HG04184.hp1 NA18964.hp2 others(3): Show |
intron_variant | MODIFIER | c.-162-2294_-162-229 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124019052 | ||||||
| chrX:124019052 | C | CTTTT | 6 | a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0171 others(3): Show |
6 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(3): Show |
intron_variant | MODIFIER | c.-162-2296_-162-229 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124019052 | ||||||
| chrX:124019052 | CT | C | 5 | a0001c0001t0001g0091 a0001c0001t0001g0118 a0001c0001t0001g0177 others(2): Show |
5 | HG01257.hp2 HG02165.hp2 HG02976.hp2 others(2): Show |
intron_variant | MODIFIER | c.-162-2293delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124019052 | ||||||
| chrX:124019149 | C | T | 1 | a0001c0001t0001g0067 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.-162-2218C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124019149 | |||||||
| chrX:124019540 | A | G | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.-162-1827A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124019540 | |||||||
| chrX:124019642 | A | G | 1 | a0001c0001t0001g0249 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.-162-1725A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124019642 | |||||||
| chrX:124019913 | G | A | 1 | a0001c0001t0002g0021 | 1 | HG03942.hp1 | intron_variant | MODIFIER | c.-162-1454G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124019913 | |||||||
| chrX:124019947 | A | G | 1 | a0001c0001t0001g0186 | 1 | HG02723.hp1 | intron_variant | MODIFIER | c.-162-1420A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124019947 | |||||||
| chrX:124020209 | G | A | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.-162-1158G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124020209 | |||||||
| chrX:124020256 | C | T | 1 | a0001c0001t0001g0129 | 1 | NA18999.hp2 | intron_variant | MODIFIER | c.-162-1111C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124020256 | |||||||
| chrX:124020395 | C | A | 2 | a0001c0001t0001g0089 a0001c0001t0001g0164 |
2 | HG02451.hp2 HG02818.hp1 |
intron_variant | MODIFIER | c.-162-972C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124020395 | |||||||
| chrX:124020395 | C | G | 102 | a0001c0001t0001g0001 a0001c0001t0001g0050 a0001c0001t0001g0051 others(99): Show |
103 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(100): Show |
intron_variant | MODIFIER | c.-162-972C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124020395 | |||||||
| chrX:124020458 | G | A | 104 | a0001c0001t0001g0001 a0001c0001t0001g0050 a0001c0001t0001g0051 others(101): Show |
105 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(102): Show |
intron_variant | MODIFIER | c.-162-909G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124020458 | |||||||
| chrX:124020780 | G | T | 2 | a0001c0001t0002g0218 a0001c0001t0002g0223 |
2 | HG02683.hp1 HG02738.hp1 |
intron_variant | MODIFIER | c.-162-587G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124020780 | |||||||
| chrX:124020829 | A | T | 1 | a0001c0001t0001g0144 | 1 | HG00597.hp2 | intron_variant | MODIFIER | c.-162-538A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | chrX | 124020829 | |||||||
| chrX:124021182 | TATTA | T | 5 | a0001c0001t0001g0004 a0001c0001t0001g0077 a0001c0001t0001g0266 others(2): Show |
5 | HG02071.hp1 NA18991.hp2 NA19058.hp1 others(2): Show |
intron_variant | MODIFIER | c.-162-179_-162-176d others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chrX | 124021182 | ||||||
| chrX:124021705 | A | G | 49 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(46): Show |
49 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show |
intron_variant | MODIFIER | c.-98+274A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 2/34 | chrX | 124021705 | |||||||
| chrX:124021776 | C | T | 8 | a0001c0001t0001g0079 a0001c0001t0001g0084 a0001c0001t0001g0124 others(5): Show |
8 | HG00738.hp1 HG01993.hp2 HG02040.hp1 others(5): Show |
intron_variant | MODIFIER | c.-98+345C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 2/34 | chrX | 124021776 | |||||||
| chrX:124021818 | T | C | 1 | a0001c0001t0001g0242 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.-98+387T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 2/34 | chrX | 124021818 | |||||||
| chrX:124022136 | C | T | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.-97-395C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 2/34 | chrX | 124022136 | |||||||
| chrX:124022370 | CA | C | 250 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(247): Show |
251 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(248): Show |
intron_variant | MODIFIER | c.-97-145delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 2/34 | INFO_REALIGN_3_PRIME | chrX | 124022370 | ||||||
| chrX:124022467 | A | G | 6 | a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 others(3): Show |
6 | HG01167.hp1 HG02257.hp1 HG02615.hp1 others(3): Show |
intron_variant | MODIFIER | c.-97-64A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 2/34 | chrX | 124022467 | |||||||
| chrX:124022770 | C | G | 1 | a0001c0001t0001g0086 | 1 | NA18957.hp1 | intron_variant | MODIFIER | c.44+99C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124022770 | |||||||
| chrX:124022967 | G | A | 2 | a0001c0001t0001g0094 a0001c0001t0001g0250 |
2 | HG02109.hp2 HG03130.hp1 |
intron_variant | MODIFIER | c.44+296G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124022967 | |||||||
| chrX:124023124 | A | T | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.44+453A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124023124 | |||||||
| chrX:124023252 | G | A | 42 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(39): Show |
42 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(39): Show |
intron_variant | MODIFIER | c.44+581G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124023252 | |||||||
| chrX:124023304 | C | T | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.44+633C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124023304 | |||||||
| chrX:124023319 | G | C | 4 | a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0001g0128 others(1): Show |
4 | HG00738.hp1 HG02040.hp1 HG02148.hp1 others(1): Show |
intron_variant | MODIFIER | c.44+648G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124023319 | |||||||
| chrX:124023841 | G | A | 2 | a0001c0001t0001g0219 a0001c0001t0001g0226 |
2 | HG02165.hp1 NA19004.hp1 |
intron_variant | MODIFIER | c.44+1170G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124023841 | |||||||
| chrX:124023855 | A | G | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.44+1184A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124023855 | |||||||
| chrX:124023866 | A | G | 1 | a0001c0001t0001g0196 | 1 | NA18964.hp2 | intron_variant | MODIFIER | c.44+1195A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124023866 | |||||||
| chrX:124023872 | C | T | 2 | a0001c0003t0001g0061 a0001c0003t0001g0075 |
2 | HG02886.hp1 HG03471.hp1 |
intron_variant | MODIFIER | c.44+1201C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124023872 | |||||||
| chrX:124024164 | A | G | 1 | a0001c0001t0001g0271 | 1 | HG01517.hp1 | intron_variant | MODIFIER | c.44+1493A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124024164 | |||||||
| chrX:124024324 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.45-1516G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124024324 | |||||||
| chrX:124025029 | T | A | 1 | a0001c0001t0001g0242 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.45-811T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124025029 | |||||||
| chrX:124025130 | T | C | 53 | a0001c0001t0001g0004 a0001c0001t0001g0100 a0001c0001t0001g0181 others(50): Show |
53 | HG00438.hp2 HG01123.hp1 HG01175.hp1 others(50): Show |
intron_variant | MODIFIER | c.45-710T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124025130 | |||||||
| chrX:124025187 | T | A | 1 | a0001c0001t0001g0140 | 1 | HG01361.hp2 | intron_variant | MODIFIER | c.45-653T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124025187 | |||||||
| chrX:124025461 | T | C | 1 | a0001c0001t0001g0242 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.45-379T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124025461 | |||||||
| chrX:124025522 | G | C | 260 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(257): Show |
261 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(258): Show |
intron_variant | MODIFIER | c.45-318G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124025522 | |||||||
| chrX:124025624 | T | C | 62 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(59): Show |
62 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(59): Show |
intron_variant | MODIFIER | c.45-216T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124025624 | |||||||
| chrX:124025683 | A | G | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.45-157A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124025683 | |||||||
| chrX:124025829 | T | C | 1 | a0001c0001t0001g0174 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.45-11T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 3/34 | chrX | 124025829 | |||||||
| chrX:124026000 | A | C | 1 | a0001c0001t0001g0048 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.123+82A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124026000 | |||||||
| chrX:124026128 | A | AAAT | 91 | a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 others(88): Show |
92 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(89): Show |
intron_variant | MODIFIER | c.123+251_123+253dup others(3): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | A | AAATAAT | 49 | a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0052 others(46): Show |
49 | HG00735.hp1 HG01069.hp1 HG01081.hp2 others(46): Show |
intron_variant | MODIFIER | c.123+248_123+253dup others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | A | AAATAATA others(2): Show |
19 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0055 others(16): Show |
19 | HG01167.hp1 HG02040.hp1 HG02056.hp1 others(16): Show |
intron_variant | MODIFIER | c.123+245_123+253dup others(9): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | A | AAATAATA others(5): Show |
5 | a0001c0001t0001g0013 a0001c0001t0001g0101 a0001c0001t0001g0145 others(2): Show |
5 | HG02622.hp2 HG03225.hp1 HG03540.hp2 others(2): Show |
intron_variant | MODIFIER | c.123+242_123+253dup others(12): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | A | AAATAATA others(11): Show |
1 | a0001c0001t0003g0134 | 1 | NA19240.hp2 | intron_variant | MODIFIER | c.123+236_123+253dup others(18): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | AAAT | A | 4 | a0001c0001t0001g0008 a0001c0001t0001g0176 a0001c0001t0001g0177 others(1): Show |
4 | HG02630.hp1 HG02818.hp2 HG02976.hp2 others(1): Show |
intron_variant | MODIFIER | c.123+251_123+253del others(3): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | AAATAAT | A | 13 | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0049 others(10): Show |
13 | HG01106.hp1 HG02071.hp1 HG02559.hp2 others(10): Show |
intron_variant | MODIFIER | c.123+248_123+253del others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | AAATAATA others(2): Show |
A | 72 | a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0100 others(69): Show |
72 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(69): Show |
intron_variant | MODIFIER | c.123+245_123+253del others(9): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | AAATAATA others(5): Show |
A | 1 | a0001c0001t0001g0153 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.123+242_123+253del others(12): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026128 | AAATAATA others(8): Show |
A | 1 | a0001c0001t0001g0228 | 1 | NA19090.hp2 | intron_variant | MODIFIER | c.123+239_123+253del others(15): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124026128 | ||||||
| chrX:124026154 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.123+236A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124026154 | |||||||
| chrX:124026165 | A | T | 1 | a0001c0001t0001g0266 | 1 | NA19058.hp1 | intron_variant | MODIFIER | c.123+247A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124026165 | |||||||
| chrX:124026172 | C | A | 1 | a0001c0001t0001g0189 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.123+254C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124026172 | |||||||
| chrX:124026366 | A | G | 2 | a0001c0001t0001g0154 a0001c0001t0001g0157 |
2 | HG00673.hp1 HG02015.hp1 |
intron_variant | MODIFIER | c.123+448A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124026366 | |||||||
| chrX:124026908 | A | G | 3 | a0001c0001t0001g0088 a0001c0001t0001g0101 a0001c0001t0001g0178 |
3 | HG02109.hp1 HG02809.hp2 HG03540.hp2 |
intron_variant | MODIFIER | c.123+990A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124026908 | |||||||
| chrX:124027162 | C | T | 1 | a0001c0001t0002g0257 | 1 | NA18950.hp1 | intron_variant | MODIFIER | c.123+1244C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124027162 | |||||||
| chrX:124027210 | C | T | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.123+1292C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124027210 | |||||||
| chrX:124027656 | A | G | 1 | a0001c0001t0002g0187 | 1 | HG02896.hp1 | intron_variant | MODIFIER | c.123+1738A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124027656 | |||||||
| chrX:124027838 | T | G | 2 | a0001c0001t0001g0176 a0001c0001t0001g0177 |
2 | HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.123+1920T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124027838 | |||||||
| chrX:124027876 | G | C | 1 | a0001c0001t0001g0255 | 1 | HG04204.hp1 | intron_variant | MODIFIER | c.123+1958G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124027876 | |||||||
| chrX:124027882 | G | A | 1 | a0001c0001t0001g0271 | 1 | HG01517.hp1 | intron_variant | MODIFIER | c.123+1964G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124027882 | |||||||
| chrX:124028083 | G | A | 1 | a0001c0001t0001g0094 | 1 | HG03130.hp1 | intron_variant | MODIFIER | c.123+2165G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028083 | |||||||
| chrX:124028578 | C | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.124-2383C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028578 | |||||||
| chrX:124028644 | G | A | 1 | a0001c0001t0001g0099 | 1 | HG03239.hp2 | intron_variant | MODIFIER | c.124-2317G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028644 | |||||||
| chrX:124028670 | C | T | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.124-2291C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028670 | |||||||
| chrX:124028794 | T | TTATATA | 3 | a0001c0001t0001g0246 a0001c0002t0001g0063 a0001c0002t0001g0069 |
3 | HG01496.hp1 HG03195.hp2 NA18906.hp1 |
intron_variant | MODIFIER | c.124-2143_124-2138d others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028794 | ||||||
| chrX:124028794 | TTA | T | 3 | a0001c0001t0001g0117 a0001c0001t0001g0231 a0001c0001t0002g0260 |
3 | HG01358.hp1 HG03491.hp2 NA19064.hp2 |
intron_variant | MODIFIER | c.124-2139_124-2138d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028794 | ||||||
| chrX:124028794 | TTATA | T | 13 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(10): Show |
13 | HG00438.hp2 HG01952.hp1 HG02280.hp1 others(10): Show |
intron_variant | MODIFIER | c.124-2141_124-2138d others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028794 | ||||||
| chrX:124028794 | TTATATA | T | 178 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(175): Show |
179 | HG00558.hp2 HG00621.hp1 HG00639.hp1 others(176): Show |
intron_variant | MODIFIER | c.124-2143_124-2138d others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028794 | ||||||
| chrX:124028812 | ATATATAT others(7): Show |
A | 1 | a0001c0001t0001g0189 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.124-2147_124-2134d others(16): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028812 | ||||||
| chrX:124028818 | A | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.124-2143A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028818 | |||||||
| chrX:124028818 | ATATATTT others(1): Show |
A | 6 | a0001c0001t0001g0188 a0001c0001t0002g0056 a0001c0001t0002g0057 others(3): Show |
6 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(3): Show |
intron_variant | MODIFIER | c.124-2141_124-2134d others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028818 | ||||||
| chrX:124028820 | A | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.124-2141A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028820 | |||||||
| chrX:124028820 | ATATT | A | 4 | a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 others(1): Show |
4 | HG02451.hp1 HG02622.hp1 HG02630.hp1 others(1): Show |
intron_variant | MODIFIER | c.124-2139_124-2136d others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028820 | ||||||
| chrX:124028822 | A | ATATATAT others(3): Show |
4 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0065 others(1): Show |
4 | HG02630.hp2 HG02976.hp1 HG03098.hp1 others(1): Show |
intron_variant | MODIFIER | c.124-2138_124-2137i others(12): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028822 | ||||||
| chrX:124028822 | A | T | 25 | a0001c0001t0001g0068 a0001c0001t0001g0088 a0001c0001t0001g0110 others(22): Show |
25 | HG00639.hp2 HG01081.hp1 HG01243.hp1 others(22): Show |
intron_variant | MODIFIER | c.124-2139A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028822 | |||||||
| chrX:124028822 | ATT | A | 29 | a0001c0001t0001g0013 a0001c0001t0002g0005 a0001c0001t0002g0014 others(26): Show |
29 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(26): Show |
intron_variant | MODIFIER | c.124-2129_124-2128d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028822 | ||||||
| chrX:124028824 | T | A | 13 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(10): Show |
13 | HG01346.hp1 HG01515.hp1 HG01517.hp2 others(10): Show |
intron_variant | MODIFIER | c.124-2137T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028824 | |||||||
| chrX:124028825 | T | A | 2 | a0001c0001t0001g0049 a0001c0001t0001g0185 |
2 | HG02257.hp2 HG02559.hp2 |
intron_variant | MODIFIER | c.124-2136T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028825 | |||||||
| chrX:124028826 | T | A | 3 | a0001c0001t0002g0039 a0001c0001t0002g0046 a0001c0001t0002g0071 |
3 | HG00558.hp1 HG04115.hp1 NA19000.hp1 |
intron_variant | MODIFIER | c.124-2135T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028826 | |||||||
| chrX:124028934 | G | A | 43 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(40): Show |
43 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(40): Show |
intron_variant | MODIFIER | c.124-2027G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028934 | |||||||
| chrX:124028981 | T | A | 2 | a0001c0001t0001g0182 a0001c0001t0001g0240 |
2 | NA18974.hp1 NA18999.hp1 |
intron_variant | MODIFIER | c.124-1980T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028981 | |||||||
| chrX:124028985 | TTA | T | 83 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0100 others(80): Show |
83 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(80): Show |
intron_variant | MODIFIER | c.124-1948_124-1947d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028985 | ||||||
| chrX:124028989 | A | ATT | 15 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0077 others(12): Show |
16 | HG00597.hp2 HG01106.hp1 HG02135.hp1 others(13): Show |
intron_variant | MODIFIER | c.124-1971_124-1970i others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | INFO_REALIGN_3_PRIME | chrX | 124028989 | ||||||
| chrX:124028991 | A | T | 154 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(151): Show |
154 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(151): Show |
intron_variant | MODIFIER | c.124-1970A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028991 | |||||||
| chrX:124028993 | A | T | 83 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0100 others(80): Show |
83 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(80): Show |
intron_variant | MODIFIER | c.124-1968A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028993 | |||||||
| chrX:124028995 | A | G | 1 | a0001c0001t0001g0211 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.124-1966A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028995 | |||||||
| chrX:124028995 | A | T | 2 | a0001c0001t0001g0185 a0001c0001t0001g0189 |
2 | HG02257.hp2 HG02258.hp1 |
intron_variant | MODIFIER | c.124-1966A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124028995 | |||||||
| chrX:124029007 | A | T | 17 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0010 others(14): Show |
17 | HG00738.hp1 HG01496.hp1 HG01884.hp2 others(14): Show |
intron_variant | MODIFIER | c.124-1954A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029007 | |||||||
| chrX:124029011 | A | T | 250 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(247): Show |
251 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(248): Show |
intron_variant | MODIFIER | c.124-1950A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029011 | |||||||
| chrX:124029117 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.124-1844C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029117 | |||||||
| chrX:124029207 | T | C | 60 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(57): Show |
60 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(57): Show |
intron_variant | MODIFIER | c.124-1754T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029207 | |||||||
| chrX:124029398 | C | T | 8 | a0001c0001t0001g0216 a0001c0001t0001g0222 a0001c0001t0001g0227 others(5): Show |
8 | NA18949.hp1 NA18950.hp1 NA18954.hp2 others(5): Show |
intron_variant | MODIFIER | c.124-1563C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029398 | |||||||
| chrX:124029456 | G | T | 49 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(46): Show |
49 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show |
intron_variant | MODIFIER | c.124-1505G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029456 | |||||||
| chrX:124029530 | C | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.124-1431C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029530 | |||||||
| chrX:124029541 | G | A | 1 | a0001c0001t0001g0109 | 1 | NA18950.hp2 | intron_variant | MODIFIER | c.124-1420G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029541 | |||||||
| chrX:124029789 | G | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.124-1172G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029789 | |||||||
| chrX:124029795 | G | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.124-1166G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124029795 | |||||||
| chrX:124030101 | A | G | 2 | a0001c0001t0001g0078 a0001c0001t0001g0135 |
2 | HG00642.hp1 HG01192.hp1 |
intron_variant | MODIFIER | c.124-860A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124030101 | |||||||
| chrX:124030197 | T | C | 1 | a0001c0001t0001g0159 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.124-764T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124030197 | |||||||
| chrX:124030596 | C | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.124-365C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124030596 | |||||||
| chrX:124030921 | G | T | 1 | a0001c0001t0001g0163 | 1 | HG02257.hp1 | intron_variant | MODIFIER | c.124-40G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 4/34 | chrX | 124030921 | |||||||
| chrX:124031368 | A | T | 1 | a0001c0001t0001g0192 | 1 | NA18957.hp2 | intron_variant | MODIFIER | c.288+243A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031368 | |||||||
| chrX:124031447 | C | A | 1 | a0001c0001t0001g0125 | 1 | NA18981.hp1 | intron_variant | MODIFIER | c.288+322C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031447 | |||||||
| chrX:124031535 | G | T | 249 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(246): Show |
250 | HG00140.hp1 HG00280.hp1 HG00438.hp2 others(247): Show |
intron_variant | MODIFIER | c.288+410G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031535 | |||||||
| chrX:124031551 | G | GT | 37 | a0001c0001t0001g0004 a0001c0001t0001g0051 a0001c0001t0001g0052 others(34): Show |
37 | HG00639.hp1 HG00735.hp1 HG00738.hp1 others(34): Show |
intron_variant | MODIFIER | c.288+434dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | INFO_REALIGN_3_PRIME | chrX | 124031551 | ||||||
| chrX:124031552 | TTTTTTTT others(1): Show |
T | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.288+451_288+458del others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | INFO_REALIGN_3_PRIME | chrX | 124031552 | ||||||
| chrX:124031555 | T | G | 2 | a0001c0001t0001g0164 a0001c0001t0001g0219 |
2 | HG02818.hp1 NA19004.hp1 |
intron_variant | MODIFIER | c.288+430T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031555 | |||||||
| chrX:124031577 | T | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.288+452T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031577 | |||||||
| chrX:124031655 | T | C | 2 | a0001c0002t0001g0062 a0001c0002t0001g0063 |
2 | HG03225.hp1 NA18906.hp1 |
intron_variant | MODIFIER | c.288+530T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031655 | |||||||
| chrX:124031741 | A | T | 2 | a0001c0001t0002g0017 a0001c0001t0002g0021 |
2 | HG03710.hp1 HG03942.hp1 |
intron_variant | MODIFIER | c.288+616A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031741 | |||||||
| chrX:124031833 | C | T | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.288+708C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031833 | |||||||
| chrX:124031879 | C | T | 1 | a0001c0001t0001g0084 | 1 | HG01993.hp2 | intron_variant | MODIFIER | c.288+754C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124031879 | |||||||
| chrX:124032091 | A | G | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.288+966A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032091 | |||||||
| chrX:124032169 | A | G | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.288+1044A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032169 | |||||||
| chrX:124032217 | G | A | 1 | a0001c0001t0001g0179 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.288+1092G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032217 | |||||||
| chrX:124032436 | A | G | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.288+1311A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032436 | |||||||
| chrX:124032465 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.288+1340A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032465 | |||||||
| chrX:124032468 | C | A | 59 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(56): Show |
59 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(56): Show |
intron_variant | MODIFIER | c.288+1343C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032468 | |||||||
| chrX:124032775 | T | C | 1 | a0001c0003t0001g0075 | 1 | HG02886.hp1 | intron_variant | MODIFIER | c.288+1650T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032775 | |||||||
| chrX:124032905 | A | G | 2 | a0001c0001t0001g0219 a0001c0001t0001g0226 |
2 | HG02165.hp1 NA19004.hp1 |
intron_variant | MODIFIER | c.288+1780A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032905 | |||||||
| chrX:124032992 | G | T | 1 | a0001c0001t0001g0011 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.288+1867G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124032992 | |||||||
| chrX:124033027 | A | G | 1 | a0001c0001t0001g0012 | 1 | HG02451.hp1 | intron_variant | MODIFIER | c.288+1902A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124033027 | |||||||
| chrX:124033541 | C | T | 1 | a0001c0001t0001g0199 | 1 | NA18943.hp1 | intron_variant | MODIFIER | c.288+2416C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124033541 | |||||||
| chrX:124033677 | A | C | 4 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(1): Show |
4 | HG02451.hp1 HG02622.hp1 HG03540.hp1 others(1): Show |
intron_variant | MODIFIER | c.288+2552A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124033677 | |||||||
| chrX:124033703 | A | C | 1 | a0001c0001t0001g0093 | 1 | NA18954.hp1 | intron_variant | MODIFIER | c.288+2578A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124033703 | |||||||
| chrX:124033767 | A | T | 1 | a0001c0001t0001g0180 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.288+2642A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124033767 | |||||||
| chrX:124033790 | CAT | C | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.288+2667_288+2668d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | INFO_REALIGN_3_PRIME | chrX | 124033790 | ||||||
| chrX:124033847 | C | T | 1 | a0001c0001t0001g0091 | 1 | HG02165.hp2 | intron_variant | MODIFIER | c.288+2722C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124033847 | |||||||
| chrX:124034295 | T | C | 3 | a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 |
3 | HG02647.hp1 HG02896.hp2 HG02897.hp1 |
intron_variant | MODIFIER | c.288+3170T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124034295 | |||||||
| chrX:124034400 | C | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.289-3127C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124034400 | |||||||
| chrX:124034643 | C | G | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.289-2884C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124034643 | |||||||
| chrX:124034649 | A | G | 50 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(47): Show |
50 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(47): Show |
intron_variant | MODIFIER | c.289-2878A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124034649 | |||||||
| chrX:124034823 | A | G | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.289-2704A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124034823 | |||||||
| chrX:124034856 | AGTT | A | 3 | a0001c0001t0001g0234 a0001c0001t0001g0238 a0001c0001t0002g0214 |
3 | NA18970.hp1 NA19006.hp1 NA19055.hp1 |
intron_variant | MODIFIER | c.289-2649_289-2647d others(5): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | INFO_REALIGN_3_PRIME | chrX | 124034856 | ||||||
| chrX:124034868 | T | A | 1 | a0001c0001t0001g0159 | 1 | HG02027.hp1 | intron_variant | MODIFIER | c.289-2659T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124034868 | |||||||
| chrX:124034875 | G | GTTA | 24 | a0001c0001t0001g0099 a0001c0001t0001g0116 a0001c0001t0001g0123 others(21): Show |
24 | HG01081.hp2 HG01123.hp1 HG01123.hp2 others(21): Show |
intron_variant | MODIFIER | c.289-2650_289-2649i others(5): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | INFO_REALIGN_3_PRIME | chrX | 124034875 | ||||||
| chrX:124034875 | GTTGTTA | G | 49 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(46): Show |
49 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show |
intron_variant | MODIFIER | c.289-2649_289-2644d others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | INFO_REALIGN_3_PRIME | chrX | 124034875 | ||||||
| chrX:124034878 | G | A | 204 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0008 others(201): Show |
205 | HG00280.hp1 HG00438.hp2 HG00558.hp2 others(202): Show |
intron_variant | MODIFIER | c.289-2649G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124034878 | |||||||
| chrX:124034878 | G | GTTA | 2 | a0001c0001t0001g0064 a0001c0003t0001g0061 |
2 | HG01884.hp2 HG03471.hp1 |
intron_variant | MODIFIER | c.289-2623_289-2621d others(5): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | INFO_REALIGN_3_PRIME | chrX | 124034878 | ||||||
| chrX:124035053 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.289-2474C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124035053 | |||||||
| chrX:124035055 | C | T | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.289-2472C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124035055 | |||||||
| chrX:124035091 | G | A | 1 | a0001c0001t0002g0059 | 1 | HG01175.hp2 | intron_variant | MODIFIER | c.289-2436G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124035091 | |||||||
| chrX:124035500 | G | A | 1 | a0001c0001t0001g0234 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.289-2027G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124035500 | |||||||
| chrX:124035756 | ATG | A | 83 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(80): Show |
83 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(80): Show |
intron_variant | MODIFIER | c.289-1768_289-1767d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | INFO_REALIGN_3_PRIME | chrX | 124035756 | ||||||
| chrX:124035805 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.289-1722C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124035805 | |||||||
| chrX:124036215 | A | G | 2 | a0001c0001t0001g0092 a0001c0001t0001g0155 |
2 | NA18948.hp1 NA19067.hp1 |
intron_variant | MODIFIER | c.289-1312A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036215 | |||||||
| chrX:124036293 | C | T | 1 | a0001c0001t0001g0259 | 1 | HG03831.hp1 | intron_variant | MODIFIER | c.289-1234C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036293 | |||||||
| chrX:124036476 | C | T | 1 | a0001c0001t0001g0095 | 1 | HG02135.hp1 | intron_variant | MODIFIER | c.289-1051C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036476 | |||||||
| chrX:124036609 | C | T | 3 | a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0163 |
3 | HG02257.hp1 HG02615.hp1 HG02622.hp2 |
intron_variant | MODIFIER | c.289-918C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036609 | |||||||
| chrX:124036658 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.289-869G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036658 | |||||||
| chrX:124036701 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.289-826C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036701 | |||||||
| chrX:124036715 | C | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.289-812C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036715 | |||||||
| chrX:124036816 | C | T | 1 | a0001c0001t0001g0136 | 1 | NA18906.hp2 | intron_variant | MODIFIER | c.289-711C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036816 | |||||||
| chrX:124036871 | A | G | 1 | a0001c0001t0001g0249 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.289-656A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124036871 | |||||||
| chrX:124037097 | G | C | 1 | a0001c0001t0001g0158 | 1 | HG02735.hp1 | intron_variant | MODIFIER | c.289-430G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124037097 | |||||||
| chrX:124037105 | C | T | 1 | a0001c0001t0001g0073 | 1 | HG02717.hp1 | intron_variant | MODIFIER | c.289-422C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124037105 | |||||||
| chrX:124037138 | G | A | 1 | a0001c0001t0002g0040 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.289-389G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 5/34 | chrX | 124037138 | |||||||
| chrX:124038018 | TAAGC | T | 2 | a0001c0001t0001g0150 a0001c0001t0001g0196 |
2 | NA18964.hp2 NA18971.hp1 |
intron_variant | MODIFIER | c.385+407_385+410del others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | INFO_REALIGN_3_PRIME | chrX | 124038018 | ||||||
| chrX:124038022 | C | T | 1 | a0001c0001t0002g0027 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.385+399C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124038022 | |||||||
| chrX:124038203 | C | T | 1 | a0001c0001t0001g0050 | 1 | HG01496.hp2 | intron_variant | MODIFIER | c.385+580C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124038203 | |||||||
| chrX:124038821 | T | C | 2 | a0001c0001t0001g0100 a0001c0001t0001g0225 |
2 | NA19080.hp2 NA19091.hp1 |
intron_variant | MODIFIER | c.385+1198T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124038821 | |||||||
| chrX:124038881 | T | A | 1 | a0001c0001t0001g0243 | 1 | HG01175.hp1 | intron_variant | MODIFIER | c.385+1258T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124038881 | |||||||
| chrX:124039120 | T | C | 1 | a0001c0001t0001g0073 | 1 | HG02717.hp1 | intron_variant | MODIFIER | c.385+1497T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124039120 | |||||||
| chrX:124039137 | T | TTTA | 165 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0050 others(162): Show |
166 | HG00438.hp2 HG00558.hp2 HG00597.hp2 others(163): Show |
intron_variant | MODIFIER | c.385+1544_385+1546d others(5): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | INFO_REALIGN_3_PRIME | chrX | 124039137 | ||||||
| chrX:124039137 | T | TTTATTA | 21 | a0001c0001t0001g0052 a0001c0001t0001g0076 a0001c0001t0001g0093 others(18): Show |
21 | HG01261.hp1 HG01361.hp2 HG01433.hp1 others(18): Show |
intron_variant | MODIFIER | c.385+1541_385+1546d others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | INFO_REALIGN_3_PRIME | chrX | 124039137 | ||||||
| chrX:124039137 | T | TTTATTAT others(2): Show |
6 | a0001c0001t0001g0048 a0001c0001t0001g0090 a0001c0001t0001g0103 others(3): Show |
6 | HG01099.hp1 HG01167.hp1 HG02965.hp1 others(3): Show |
intron_variant | MODIFIER | c.385+1538_385+1546d others(11): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | INFO_REALIGN_3_PRIME | chrX | 124039137 | ||||||
| chrX:124039137 | T | TTTATTAT others(8): Show |
2 | a0001c0001t0001g0074 a0001c0003t0001g0075 |
2 | HG02886.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.385+1532_385+1546d others(17): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | INFO_REALIGN_3_PRIME | chrX | 124039137 | ||||||
| chrX:124039223 | A | C | 1 | a0001c0001t0001g0093 | 1 | NA18954.hp1 | intron_variant | MODIFIER | c.385+1600A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124039223 | |||||||
| chrX:124039233 | G | T | 1 | a0001c0001t0001g0124 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.385+1610G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124039233 | |||||||
| chrX:124039397 | C | T | 1 | a0001c0001t0001g0211 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.385+1774C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124039397 | |||||||
| chrX:124039511 | A | G | 1 | a0001c0001t0002g0016 | 1 | HG03490.hp1 | intron_variant | MODIFIER | c.385+1888A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124039511 | |||||||
| chrX:124039609 | T | C | 4 | a0001c0001t0001g0088 a0001c0001t0001g0101 a0001c0001t0001g0178 others(1): Show |
4 | HG02109.hp1 HG02809.hp2 HG03540.hp2 others(1): Show |
intron_variant | MODIFIER | c.385+1986T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124039609 | |||||||
| chrX:124039640 | CT | C | 186 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0050 others(183): Show |
187 | HG00140.hp1 HG00438.hp2 HG00558.hp2 others(184): Show |
intron_variant | MODIFIER | c.385+2032delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | INFO_REALIGN_3_PRIME | chrX | 124039640 | ||||||
| chrX:124039849 | T | G | 1 | a0001c0001t0001g0003 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.385+2226T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124039849 | |||||||
| chrX:124040286 | G | T | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.386-2283G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124040286 | |||||||
| chrX:124040389 | C | A | 259 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(256): Show |
260 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(257): Show |
intron_variant | MODIFIER | c.386-2180C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124040389 | |||||||
| chrX:124040522 | G | A | 1 | a0001c0001t0001g0117 | 1 | HG01358.hp1 | intron_variant | MODIFIER | c.386-2047G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124040522 | |||||||
| chrX:124040543 | G | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.386-2026G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124040543 | |||||||
| chrX:124040838 | T | A | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.386-1731T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124040838 | |||||||
| chrX:124040841 | T | C | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.386-1728T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124040841 | |||||||
| chrX:124040854 | C | CT | 54 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0049 others(51): Show |
55 | HG00597.hp2 HG00738.hp1 HG01175.hp1 others(52): Show |
intron_variant | MODIFIER | c.386-1695dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | INFO_REALIGN_3_PRIME | chrX | 124040854 | ||||||
| chrX:124040856 | T | C | 1 | a0001c0001t0002g0045 | 1 | NA19082.hp1 | intron_variant | MODIFIER | c.386-1713T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124040856 | |||||||
| chrX:124040934 | C | T | 103 | a0001c0001t0001g0001 a0001c0001t0001g0050 a0001c0001t0001g0051 others(100): Show |
104 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(101): Show |
intron_variant | MODIFIER | c.386-1635C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124040934 | |||||||
| chrX:124041036 | T | G | 1 | a0001c0001t0001g0186 | 1 | HG02723.hp1 | intron_variant | MODIFIER | c.386-1533T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041036 | |||||||
| chrX:124041094 | G | A | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.386-1475G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041094 | |||||||
| chrX:124041218 | A | T | 1 | a0001c0001t0001g0114 | 1 | HG04184.hp2 | intron_variant | MODIFIER | c.386-1351A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041218 | |||||||
| chrX:124041218 | AT | A | 81 | a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0073 others(78): Show |
81 | HG00438.hp2 HG00558.hp1 HG00621.hp1 others(78): Show |
intron_variant | MODIFIER | c.386-1336delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | INFO_REALIGN_3_PRIME | chrX | 124041218 | ||||||
| chrX:124041241 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.386-1328G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041241 | |||||||
| chrX:124041409 | A | G | 1 | a0001c0001t0001g0200 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.386-1160A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041409 | |||||||
| chrX:124041419 | A | G | 1 | a0001c0001t0001g0099 | 1 | HG03239.hp2 | intron_variant | MODIFIER | c.386-1150A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041419 | |||||||
| chrX:124041426 | C | T | 2 | a0001c0001t0001g0176 a0001c0001t0001g0177 |
2 | HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.386-1143C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041426 | |||||||
| chrX:124041466 | C | T | 1 | a0001c0001t0002g0218 | 1 | HG02683.hp1 | intron_variant | MODIFIER | c.386-1103C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041466 | |||||||
| chrX:124041472 | A | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.386-1097A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041472 | |||||||
| chrX:124041650 | A | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.386-919A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041650 | |||||||
| chrX:124041789 | A | G | 3 | a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 |
3 | HG01952.hp1 HG02280.hp2 NA18522.hp1 |
intron_variant | MODIFIER | c.386-780A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041789 | |||||||
| chrX:124041840 | T | C | 5 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(2): Show |
5 | HG01884.hp2 HG02630.hp2 HG02976.hp1 others(2): Show |
intron_variant | MODIFIER | c.386-729T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041840 | |||||||
| chrX:124041938 | A | G | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.386-631A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124041938 | |||||||
| chrX:124042038 | A | C | 1 | a0001c0001t0001g0272 | 1 | NA18975.hp1 | intron_variant | MODIFIER | c.386-531A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124042038 | |||||||
| chrX:124042263 | G | A | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.386-306G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124042263 | |||||||
| chrX:124042402 | C | G | 1 | a0001c0001t0001g0208 | 1 | HG02723.hp2 | intron_variant | MODIFIER | c.386-167C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124042402 | |||||||
| chrX:124042533 | C | T | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.386-36C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 6/34 | chrX | 124042533 | |||||||
| chrX:124042786 | C | T | 2 | a0001c0001t0001g0236 a0001c0001t0001g0244 |
2 | HG03654.hp1 HG04184.hp1 |
intron_variant | MODIFIER | c.462+141C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124042786 | |||||||
| chrX:124042872 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.462+227G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124042872 | |||||||
| chrX:124042946 | C | T | 1 | a0001c0001t0001g0245 | 1 | HG01346.hp2 | intron_variant | MODIFIER | c.462+301C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124042946 | |||||||
| chrX:124043109 | G | A | 4 | a0001c0001t0001g0051 a0001c0001t0001g0140 a0001c0001t0001g0142 others(1): Show |
4 | HG00639.hp1 HG01361.hp2 HG02683.hp2 others(1): Show |
intron_variant | MODIFIER | c.462+464G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124043109 | |||||||
| chrX:124043195 | A | G | 4 | a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 others(1): Show |
4 | HG00558.hp2 NA18966.hp1 NA18975.hp1 others(1): Show |
intron_variant | MODIFIER | c.462+550A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124043195 | |||||||
| chrX:124043211 | C | T | 82 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(79): Show |
82 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(79): Show |
intron_variant | MODIFIER | c.462+566C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124043211 | |||||||
| chrX:124043299 | C | T | 1 | a0001c0003t0001g0075 | 1 | HG02886.hp1 | intron_variant | MODIFIER | c.462+654C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124043299 | |||||||
| chrX:124043437 | C | T | 82 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(79): Show |
82 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(79): Show |
intron_variant | MODIFIER | c.462+792C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124043437 | |||||||
| chrX:124043505 | G | A | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.462+860G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124043505 | |||||||
| chrX:124044076 | T | C | 2 | a0001c0001t0001g0238 a0001c0001t0001g0240 |
2 | NA18970.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.463-1088T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124044076 | |||||||
| chrX:124044169 | T | C | 107 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0048 others(104): Show |
108 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(105): Show |
intron_variant | MODIFIER | c.463-995T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124044169 | |||||||
| chrX:124044493 | C | T | 1 | a0001c0001t0002g0214 | 1 | NA19006.hp1 | intron_variant | MODIFIER | c.463-671C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 7/34 | chrX | 124044493 | |||||||
| chrX:124045897 | C | T | 1 | a0001c0001t0004g0022 | 1 | HG00597.hp1 | intron_variant | MODIFIER | c.667+529C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124045897 | |||||||
| chrX:124045951 | A | T | 1 | a0001c0001t0001g0066 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.667+583A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124045951 | |||||||
| chrX:124045968 | T | G | 1 | a0001c0001t0002g0029 | 1 | HG03831.hp2 | intron_variant | MODIFIER | c.667+600T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124045968 | |||||||
| chrX:124046026 | C | T | 2 | a0001c0001t0005g0087 a0001c0001t0005g0149 |
2 | NA18941.hp2 NA19068.hp1 |
intron_variant | MODIFIER | c.667+658C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046026 | |||||||
| chrX:124046263 | A | T | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.667+895A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046263 | |||||||
| chrX:124046275 | G | A | 2 | a0001c0001t0001g0108 a0001c0001t0001g0137 |
2 | NA19003.hp2 NA19056.hp1 |
intron_variant | MODIFIER | c.667+907G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046275 | |||||||
| chrX:124046410 | A | C | 1 | a0001c0001t0001g0158 | 1 | HG02735.hp1 | intron_variant | MODIFIER | c.668-944A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046410 | |||||||
| chrX:124046417 | C | G | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.668-937C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046417 | |||||||
| chrX:124046724 | G | GT | 3 | a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 |
3 | HG01952.hp1 HG02280.hp2 NA18522.hp1 |
intron_variant | MODIFIER | c.668-626dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | INFO_REALIGN_3_PRIME | chrX | 124046724 | ||||||
| chrX:124046737 | G | A | 12 | a0001c0001t0002g0016 a0001c0001t0002g0018 a0001c0001t0002g0026 others(9): Show |
12 | HG01515.hp1 HG01517.hp2 HG03490.hp1 others(9): Show |
intron_variant | MODIFIER | c.668-617G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046737 | |||||||
| chrX:124046931 | T | C | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.668-423T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046931 | |||||||
| chrX:124046962 | G | A | 1 | a0001c0001t0001g0242 | 1 | HG03017.hp1 | intron_variant | MODIFIER | c.668-392G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046962 | |||||||
| chrX:124046997 | C | T | 1 | a0001c0001t0001g0068 | 1 | HG01243.hp1 | intron_variant | MODIFIER | c.668-357C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124046997 | |||||||
| chrX:124047027 | G | C | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.668-327G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 8/34 | chrX | 124047027 | |||||||
| chrX:124047596 | GT | G | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.819+96delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | INFO_REALIGN_3_PRIME | chrX | 124047596 | ||||||
| chrX:124047694 | C | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.819+189C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124047694 | |||||||
| chrX:124047701 | G | A | 46 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(43): Show |
46 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(43): Show |
intron_variant | MODIFIER | c.819+196G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124047701 | |||||||
| chrX:124047746 | C | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.819+241C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124047746 | |||||||
| chrX:124047946 | A | G | 5 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(2): Show |
5 | HG02257.hp2 HG02258.hp1 HG02723.hp1 others(2): Show |
intron_variant | MODIFIER | c.819+441A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124047946 | |||||||
| chrX:124048038 | C | A | 1 | a0001c0001t0002g0015 | 1 | HG03669.hp2 | intron_variant | MODIFIER | c.819+533C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048038 | |||||||
| chrX:124048073 | A | G | 1 | a0001c0001t0001g0127 | 1 | HG02148.hp1 | intron_variant | MODIFIER | c.819+568A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048073 | |||||||
| chrX:124048145 | A | G | 259 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(256): Show |
260 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(257): Show |
intron_variant | MODIFIER | c.819+640A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048145 | |||||||
| chrX:124048174 | T | C | 1 | a0001c0001t0001g0150 | 1 | NA18971.hp1 | intron_variant | MODIFIER | c.819+669T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048174 | |||||||
| chrX:124048206 | G | C | 4 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(1): Show |
4 | HG02451.hp1 HG02622.hp1 HG03540.hp1 others(1): Show |
intron_variant | MODIFIER | c.819+701G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048206 | |||||||
| chrX:124048320 | A | G | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.820-685A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048320 | |||||||
| chrX:124048515 | A | G | 1 | a0001c0001t0003g0205 | 1 | HG02922.hp1 | intron_variant | MODIFIER | c.820-490A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048515 | |||||||
| chrX:124048626 | T | C | 10 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(7): Show |
10 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(7): Show |
intron_variant | MODIFIER | c.820-379T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048626 | |||||||
| chrX:124048725 | C | T | 1 | a0001c0001t0002g0027 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.820-280C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048725 | |||||||
| chrX:124048854 | A | C | 2 | a0001c0001t0001g0147 a0001c0001t0001g0162 |
2 | HG00735.hp1 HG01069.hp1 |
intron_variant | MODIFIER | c.820-151A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048854 | |||||||
| chrX:124048926 | T | C | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.820-79T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 9/34 | chrX | 124048926 | |||||||
| chrX:124049252 | G | A | 1 | a0001c0001t0001g0114 | 1 | HG04184.hp2 | intron_variant | MODIFIER | c.893+174G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 10/34 | chrX | 124049252 | |||||||
| chrX:124049377 | G | A | 2 | a0001c0001t0001g0261 a0001c0001t0002g0257 |
2 | NA18950.hp1 NA19003.hp1 |
intron_variant | MODIFIER | c.893+299G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 10/34 | chrX | 124049377 | |||||||
| chrX:124049871 | T | G | 1 | a0001c0001t0001g0199 | 1 | NA18943.hp1 | intron_variant | MODIFIER | c.894-315T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 10/34 | chrX | 124049871 | |||||||
| chrX:124049886 | C | G | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.894-300C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 10/34 | chrX | 124049886 | |||||||
| chrX:124049961 | G | A | 1 | a0001c0001t0001g0168 | 1 | HG02809.hp1 | intron_variant | MODIFIER | c.894-225G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 10/34 | chrX | 124049961 | |||||||
| chrX:124050115 | C | G | 1 | a0001c0001t0002g0056 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.894-71C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 10/34 | chrX | 124050115 | |||||||
| chrX:124050151 | A | G | 5 | a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 others(2): Show |
5 | NA18975.hp2 NA18979.hp1 NA19000.hp1 others(2): Show |
intron_variant | MODIFIER | c.894-35A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 10/34 | chrX | 124050151 | |||||||
| chrX:124050177 | C | T | 10 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(7): Show |
10 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(7): Show |
intron_variant | MODIFIER | c.894-9C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 10/34 | chrX | 124050177 | |||||||
| chrX:124050434 | T | A | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.1017+125T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 11/34 | chrX | 124050434 | |||||||
| chrX:124050788 | T | C | 1 | a0001c0001t0002g0214 | 1 | NA19006.hp1 | intron_variant | MODIFIER | c.1018-333T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 11/34 | chrX | 124050788 | |||||||
| chrX:124051099 | C | CT | 20 | a0001c0001t0001g0003 a0001c0001t0001g0049 a0001c0001t0001g0114 others(17): Show |
20 | HG00280.hp1 HG01106.hp1 HG01123.hp2 others(17): Show |
splice_acceptor_variant&intron_variant | HIGH | c.1018-3dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 11/34 | INFO_REALIGN_3_PRIME | chrX | 124051099 | ||||||
| chrX:124051099 | CT | C | 5 | a0001c0001t0001g0137 a0001c0001t0001g0147 a0001c0001t0001g0240 others(2): Show |
5 | HG01069.hp1 NA18969.hp1 NA18974.hp1 others(2): Show |
splice_region_variant&intron_variant | LOW | c.1018-3delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 11/34 | INFO_REALIGN_3_PRIME | chrX | 124051099 | ||||||
| chrX:124051499 | G | A | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.1196+105G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124051499 | |||||||
| chrX:124051673 | C | T | 1 | a0001c0001t0001g0211 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.1196+279C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124051673 | |||||||
| chrX:124051688 | T | C | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.1196+294T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124051688 | |||||||
| chrX:124052050 | A | G | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.1196+656A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124052050 | |||||||
| chrX:124052062 | GTC | G | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.1196+670_1196+671d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | INFO_REALIGN_3_PRIME | chrX | 124052062 | ||||||
| chrX:124052229 | C | T | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.1196+835C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124052229 | |||||||
| chrX:124052424 | C | T | 2 | a0001c0001t0002g0028 a0001c0001t0002g0053 |
2 | HG02080.hp2 HG02132.hp1 |
intron_variant | MODIFIER | c.1196+1030C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124052424 | |||||||
| chrX:124052501 | G | A | 7 | a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0196 others(4): Show |
7 | HG00621.hp1 HG02129.hp1 NA18941.hp1 others(4): Show |
intron_variant | MODIFIER | c.1196+1107G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124052501 | |||||||
| chrX:124052675 | C | A | 1 | a0001c0001t0002g0030 | 1 | NA18969.hp1 | intron_variant | MODIFIER | c.1196+1281C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124052675 | |||||||
| chrX:124052973 | C | T | 12 | a0001c0001t0001g0001 a0001c0001t0001g0083 a0001c0001t0001g0086 others(9): Show |
13 | NA18957.hp1 NA18965.hp1 NA18971.hp1 others(10): Show |
intron_variant | MODIFIER | c.1196+1579C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124052973 | |||||||
| chrX:124053051 | A | C | 1 | a0001c0001t0001g0111 | 1 | HG01943.hp1 | intron_variant | MODIFIER | c.1196+1657A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124053051 | |||||||
| chrX:124053222 | A | T | 3 | a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0041 |
3 | NA18990.hp1 NA19011.hp2 NA19083.hp1 |
intron_variant | MODIFIER | c.1196+1828A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124053222 | |||||||
| chrX:124053371 | T | C | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.1196+1977T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124053371 | |||||||
| chrX:124053454 | AT | A | 10 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(7): Show |
10 | HG01496.hp1 HG01884.hp2 HG02630.hp2 others(7): Show |
intron_variant | MODIFIER | c.1196+2072delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | INFO_REALIGN_3_PRIME | chrX | 124053454 | ||||||
| chrX:124053735 | T | C | 1 | a0001c0001t0001g0002 | 1 | HG02976.hp1 | intron_variant | MODIFIER | c.1196+2341T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124053735 | |||||||
| chrX:124054082 | A | G | 1 | a0001c0001t0001g0249 | 1 | NA18945.hp1 | intron_variant | MODIFIER | c.1197-2046A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124054082 | |||||||
| chrX:124054134 | G | A | 81 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(78): Show |
81 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(78): Show |
intron_variant | MODIFIER | c.1197-1994G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124054134 | |||||||
| chrX:124054274 | T | C | 5 | a0001c0001t0001g0217 a0001c0001t0001g0239 a0001c0001t0001g0241 others(2): Show |
5 | NA18981.hp2 NA18988.hp1 NA18989.hp1 others(2): Show |
intron_variant | MODIFIER | c.1197-1854T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124054274 | |||||||
| chrX:124054549 | A | G | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.1197-1579A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124054549 | |||||||
| chrX:124054951 | G | A | 1 | a0001c0001t0001g0106 | 1 | HG01261.hp1 | intron_variant | MODIFIER | c.1197-1177G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124054951 | |||||||
| chrX:124055128 | T | C | 1 | a0001c0001t0001g0102 | 1 | NA21309.hp1 | intron_variant | MODIFIER | c.1197-1000T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124055128 | |||||||
| chrX:124055139 | A | G | 3 | a0001c0001t0001g0088 a0001c0001t0001g0101 a0001c0001t0001g0178 |
3 | HG02109.hp1 HG02809.hp2 HG03540.hp2 |
intron_variant | MODIFIER | c.1197-989A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124055139 | |||||||
| chrX:124055180 | T | C | 3 | a0001c0001t0004g0022 a0001c0001t0004g0032 a0001c0001t0004g0035 |
3 | HG00597.hp1 NA18944.hp1 NA18960.hp1 |
intron_variant | MODIFIER | c.1197-948T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124055180 | |||||||
| chrX:124055517 | T | C | 2 | a0001c0001t0001g0203 a0001c0001t0001g0209 |
2 | HG02486.hp1 HG02572.hp1 |
intron_variant | MODIFIER | c.1197-611T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124055517 | |||||||
| chrX:124055662 | A | C | 82 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(79): Show |
82 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(79): Show |
intron_variant | MODIFIER | c.1197-466A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124055662 | |||||||
| chrX:124055663 | CATGGTGT others(5): Show |
C | 82 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(79): Show |
82 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(79): Show |
intron_variant | MODIFIER | c.1197-463_1197-452d others(14): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | INFO_REALIGN_3_PRIME | chrX | 124055663 | ||||||
| chrX:124055727 | A | T | 2 | a0001c0001t0001g0089 a0001c0001t0001g0164 |
2 | HG02451.hp2 HG02818.hp1 |
intron_variant | MODIFIER | c.1197-401A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124055727 | |||||||
| chrX:124055773 | G | C | 62 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(59): Show |
62 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(59): Show |
intron_variant | MODIFIER | c.1197-355G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124055773 | |||||||
| chrX:124055948 | T | G | 2 | a0001c0001t0001g0092 a0001c0001t0001g0155 |
2 | NA18948.hp1 NA19067.hp1 |
intron_variant | MODIFIER | c.1197-180T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124055948 | |||||||
| chrX:124055996 | G | GTT | 10 | a0001c0001t0001g0048 a0001c0001t0001g0082 a0001c0001t0001g0155 others(7): Show |
10 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(7): Show |
intron_variant | MODIFIER | c.1197-123_1197-122d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | INFO_REALIGN_3_PRIME | chrX | 124055996 | ||||||
| chrX:124056082 | A | G | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.1197-46A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 13/34 | chrX | 124056082 | |||||||
| chrX:124056500 | G | A | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.1304+265G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124056500 | |||||||
| chrX:124056589 | C | T | 2 | a0001c0001t0001g0120 a0001c0001t0002g0152 |
2 | HG01891.hp1 HG02886.hp2 |
intron_variant | MODIFIER | c.1304+354C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124056589 | |||||||
| chrX:124056650 | G | A | 1 | a0001c0001t0001g0054 | 1 | HG01891.hp2 | intron_variant | MODIFIER | c.1304+415G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124056650 | |||||||
| chrX:124056731 | T | TA | 228 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(225): Show |
229 | HG00140.hp1 HG00438.hp1 HG00438.hp2 others(226): Show |
intron_variant | MODIFIER | c.1304+519dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | INFO_REALIGN_3_PRIME | chrX | 124056731 | ||||||
| chrX:124056731 | T | TAA | 22 | a0001c0001t0001g0089 a0001c0001t0001g0133 a0001c0001t0001g0146 others(19): Show |
22 | HG01074.hp1 HG01109.hp1 HG01175.hp1 others(19): Show |
intron_variant | MODIFIER | c.1304+518_1304+519d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | INFO_REALIGN_3_PRIME | chrX | 124056731 | ||||||
| chrX:124056797 | T | C | 2 | a0001c0001t0002g0017 a0001c0001t0002g0021 |
2 | HG03710.hp1 HG03942.hp1 |
intron_variant | MODIFIER | c.1304+562T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124056797 | |||||||
| chrX:124056896 | CT | C | 174 | a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 others(171): Show |
175 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(172): Show |
intron_variant | MODIFIER | c.1304+673delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | INFO_REALIGN_3_PRIME | chrX | 124056896 | ||||||
| chrX:124056956 | G | A | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.1304+721G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124056956 | |||||||
| chrX:124057037 | C | T | 1 | a0001c0001t0001g0083 | 1 | NA19085.hp1 | intron_variant | MODIFIER | c.1304+802C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124057037 | |||||||
| chrX:124057165 | A | G | 1 | a0001c0001t0002g0214 | 1 | NA19006.hp1 | intron_variant | MODIFIER | c.1305-701A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124057165 | |||||||
| chrX:124057453 | G | C | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.1305-413G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124057453 | |||||||
| chrX:124057760 | T | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.1305-106T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124057760 | |||||||
| chrX:124057815 | A | G | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.1305-51A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 14/34 | chrX | 124057815 | |||||||
| chrX:124058072 | A | G | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.1416+95A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124058072 | |||||||
| chrX:124058099 | ACCCACTC others(1): Show |
A | 5 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(2): Show |
5 | HG01884.hp2 HG02630.hp2 HG02976.hp1 others(2): Show |
intron_variant | MODIFIER | c.1416+135_1416+142d others(10): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | INFO_REALIGN_3_PRIME | chrX | 124058099 | ||||||
| chrX:124058124 | T | G | 6 | a0001c0001t0001g0072 a0001c0001t0001g0121 a0001c0001t0001g0129 others(3): Show |
6 | HG00673.hp1 HG02015.hp1 NA18940.hp1 others(3): Show |
intron_variant | MODIFIER | c.1416+147T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124058124 | |||||||
| chrX:124058154 | C | CT | 64 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0012 others(61): Show |
64 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(61): Show |
intron_variant | MODIFIER | c.1416+198dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | INFO_REALIGN_3_PRIME | chrX | 124058154 | ||||||
| chrX:124058154 | C | CTT | 7 | a0001c0001t0001g0008 a0001c0001t0001g0049 a0001c0001t0001g0091 others(4): Show |
7 | HG02080.hp2 HG02165.hp2 HG02559.hp2 others(4): Show |
intron_variant | MODIFIER | c.1416+197_1416+198d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | INFO_REALIGN_3_PRIME | chrX | 124058154 | ||||||
| chrX:124058154 | CT | C | 6 | a0001c0001t0001g0088 a0001c0001t0001g0101 a0001c0001t0001g0178 others(3): Show |
6 | HG01361.hp1 HG02109.hp1 HG02809.hp2 others(3): Show |
intron_variant | MODIFIER | c.1416+198delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | INFO_REALIGN_3_PRIME | chrX | 124058154 | ||||||
| chrX:124058157 | T | C | 1 | a0001c0001t0001g0146 | 1 | HG02615.hp1 | intron_variant | MODIFIER | c.1416+180T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124058157 | |||||||
| chrX:124058446 | C | T | 1 | a0001c0001t0002g0029 | 1 | HG03831.hp2 | intron_variant | MODIFIER | c.1416+469C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124058446 | |||||||
| chrX:124058569 | A | T | 1 | a0001c0001t0001g0153 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.1416+592A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124058569 | |||||||
| chrX:124058874 | T | C | 49 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(46): Show |
49 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show |
intron_variant | MODIFIER | c.1416+897T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124058874 | |||||||
| chrX:124059088 | G | A | 36 | a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0079 others(33): Show |
36 | HG00639.hp1 HG00735.hp1 HG00738.hp1 others(33): Show |
intron_variant | MODIFIER | c.1416+1111G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124059088 | |||||||
| chrX:124059133 | A | G | 2 | a0001c0001t0001g0120 a0001c0001t0002g0152 |
2 | HG01891.hp1 HG02886.hp2 |
intron_variant | MODIFIER | c.1416+1156A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124059133 | |||||||
| chrX:124059145 | C | T | 2 | a0001c0001t0001g0211 a0001c0001t0001g0269 |
2 | HG01361.hp1 HG03239.hp1 |
intron_variant | MODIFIER | c.1416+1168C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124059145 | |||||||
| chrX:124059241 | G | A | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.1416+1264G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124059241 | |||||||
| chrX:124059291 | T | C | 1 | a0001c0001t0001g0066 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.1416+1314T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124059291 | |||||||
| chrX:124059576 | A | C | 1 | a0001c0001t0001g0200 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.1416+1599A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124059576 | |||||||
| chrX:124059687 | G | A | 1 | a0001c0001t0001g0020 | 1 | NA19090.hp1 | intron_variant | MODIFIER | c.1417-1537G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124059687 | |||||||
| chrX:124059999 | A | G | 82 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(79): Show |
82 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(79): Show |
intron_variant | MODIFIER | c.1417-1225A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124059999 | |||||||
| chrX:124060145 | T | C | 1 | a0001c0001t0001g0213 | 1 | NA21309.hp2 | intron_variant | MODIFIER | c.1417-1079T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124060145 | |||||||
| chrX:124060375 | C | A | 4 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(1): Show |
4 | HG02451.hp1 HG02622.hp1 HG03540.hp1 others(1): Show |
intron_variant | MODIFIER | c.1417-849C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124060375 | |||||||
| chrX:124060926 | A | AC | 10 | a0001c0001t0001g0052 a0001c0001t0001g0112 a0001c0001t0001g0113 others(7): Show |
10 | HG00735.hp1 HG01069.hp1 HG01074.hp1 others(7): Show |
intron_variant | MODIFIER | c.1417-291dupC | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | INFO_REALIGN_3_PRIME | chrX | 124060926 | ||||||
| chrX:124060987 | A | T | 1 | a0001c0001t0001g0082 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.1417-237A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124060987 | |||||||
| chrX:124061017 | T | C | 60 | a0001c0001t0001g0004 a0001c0001t0001g0077 a0001c0001t0001g0100 others(57): Show |
60 | HG00438.hp2 HG00621.hp1 HG01123.hp1 others(57): Show |
intron_variant | MODIFIER | c.1417-207T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124061017 | |||||||
| chrX:124061183 | T | G | 2 | a0001c0001t0001g0238 a0001c0001t0001g0240 |
2 | NA18970.hp1 NA18974.hp1 |
intron_variant | MODIFIER | c.1417-41T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124061183 | |||||||
| chrX:124061185 | A | C | 60 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(57): Show |
60 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(57): Show |
intron_variant | MODIFIER | c.1417-39A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 15/34 | chrX | 124061185 | |||||||
| chrX:124061401 | A | G | 1 | a0001c0001t0001g0189 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.1534+60A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | chrX | 124061401 | |||||||
| chrX:124061743 | C | CT | 16 | a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0050 others(13): Show |
16 | HG01106.hp1 HG01167.hp1 HG01496.hp2 others(13): Show |
splice_acceptor_variant&intron_variant | HIGH | c.1535-3dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | 124061743 | ||||||
| chrX:124061743 | C | CTT | 21 | a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 others(18): Show |
21 | HG00140.hp1 HG00735.hp2 HG01257.hp2 others(18): Show |
splice_acceptor_variant&intron_variant | HIGH | c.1535-4_1535-3dupTT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | 124061743 | ||||||
| chrX:124061743 | C | CTTT | 40 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(37): Show |
40 | HG00280.hp1 HG00438.hp1 HG00597.hp1 others(37): Show |
splice_acceptor_variant&intron_variant | HIGH | c.1535-5_1535-3dupTT others(1): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | 124061743 | ||||||
| chrX:124061743 | C | CTTTT | 5 | a0001c0001t0002g0021 a0001c0001t0002g0039 a0001c0001t0002g0047 others(2): Show |
5 | HG00558.hp1 HG01175.hp2 HG03942.hp1 others(2): Show |
splice_acceptor_variant&intron_variant | HIGH | c.1535-6_1535-3dupTT others(2): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | 124061743 | ||||||
| chrX:124061743 | CT | C | 75 | a0001c0001t0001g0004 a0001c0001t0001g0055 a0001c0001t0001g0066 others(72): Show |
75 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(72): Show |
splice_region_variant&intron_variant | LOW | c.1535-3delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | 124061743 | ||||||
| chrX:124061743 | CTT | C | 5 | a0001c0001t0001g0073 a0001c0001t0001g0250 a0001c0001t0001g0251 others(2): Show |
5 | HG02109.hp2 HG02683.hp1 HG02717.hp1 others(2): Show |
splice_region_variant&intron_variant | LOW | c.1535-4_1535-3delTT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | 124061743 | ||||||
| chrX:124061743 | CTTTTTTT others(3): Show |
C | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
splice_region_variant&intron_variant | LOW | c.1535-12_1535-3delT others(9): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | 124061743 | ||||||
| chrX:124062791 | C | T | 1 | a0001c0001t0001g0089 | 1 | HG02451.hp2 | intron_variant | MODIFIER | c.1639-111C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 17/34 | chrX | 124062791 | |||||||
| chrX:124063083 | T | C | 2 | a0001c0001t0002g0028 a0001c0001t0002g0053 |
2 | HG02080.hp2 HG02132.hp1 |
intron_variant | MODIFIER | c.1732-33T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 18/34 | chrX | 124063083 | |||||||
| chrX:124063457 | G | A | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.1821+252G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 19/34 | chrX | 124063457 | |||||||
| chrX:124063495 | G | A | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.1821+290G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 19/34 | chrX | 124063495 | |||||||
| chrX:124063687 | G | C | 1 | a0001c0001t0001g0273 | 1 | HG00558.hp2 | intron_variant | MODIFIER | c.1822-161G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 19/34 | chrX | 124063687 | |||||||
| chrX:124063707 | T | C | 105 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0048 others(102): Show |
106 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(103): Show |
intron_variant | MODIFIER | c.1822-141T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 19/34 | chrX | 124063707 | |||||||
| chrX:124064128 | T | G | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.2025+77T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124064128 | |||||||
| chrX:124064296 | A | G | 1 | a0001c0001t0002g0031 | 1 | HG02148.hp2 | intron_variant | MODIFIER | c.2025+245A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124064296 | |||||||
| chrX:124064444 | G | GT | 5 | a0001c0001t0001g0166 a0001c0001t0001g0262 a0001c0001t0002g0047 others(2): Show |
5 | HG02074.hp1 HG02683.hp2 HG03471.hp1 others(2): Show |
intron_variant | MODIFIER | c.2025+409dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | INFO_REALIGN_3_PRIME | chrX | 124064444 | ||||||
| chrX:124064724 | G | A | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.2025+673G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124064724 | |||||||
| chrX:124064914 | C | A | 259 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(256): Show |
260 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(257): Show |
intron_variant | MODIFIER | c.2025+863C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124064914 | |||||||
| chrX:124064988 | A | G | 1 | a0001c0001t0001g0184 | 1 | HG02080.hp1 | intron_variant | MODIFIER | c.2026-888A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124064988 | |||||||
| chrX:124065159 | T | G | 2 | a0001c0001t0001g0082 a0001c0001t0001g0101 |
2 | HG03540.hp2 NA18959.hp1 |
intron_variant | MODIFIER | c.2026-717T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124065159 | |||||||
| chrX:124065171 | ACTCTT | A | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.2026-704_2026-700d others(7): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124065171 | |||||||
| chrX:124065516 | A | AT | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.2026-356dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | INFO_REALIGN_3_PRIME | chrX | 124065516 | ||||||
| chrX:124065547 | T | C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.2026-329T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124065547 | |||||||
| chrX:124065826 | C | G | 1 | a0001c0001t0001g0079 | 1 | NA18995.hp1 | intron_variant | MODIFIER | c.2026-50C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 20/34 | chrX | 124065826 | |||||||
| chrX:124066143 | A | AT | 100 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(97): Show |
101 | HG00280.hp1 HG00558.hp2 HG00597.hp2 others(98): Show |
splice_region_variant&intron_variant | LOW | c.2097-5dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 21/34 | INFO_REALIGN_3_PRIME | chrX | 124066143 | ||||||
| chrX:124066143 | A | ATT | 16 | a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0074 others(13): Show |
16 | HG00639.hp1 HG01361.hp2 HG01496.hp2 others(13): Show |
splice_region_variant&intron_variant | LOW | c.2097-6_2097-5dupTT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 21/34 | INFO_REALIGN_3_PRIME | chrX | 124066143 | ||||||
| chrX:124066143 | AT | A | 53 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(50): Show |
53 | HG00140.hp1 HG00597.hp1 HG00609.hp1 others(50): Show |
splice_region_variant&intron_variant | LOW | c.2097-5delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 21/34 | INFO_REALIGN_3_PRIME | chrX | 124066143 | ||||||
| chrX:124066143 | ATT | A | 79 | a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0070 others(76): Show |
79 | HG00438.hp2 HG00558.hp1 HG00621.hp1 others(76): Show |
splice_region_variant&intron_variant | LOW | c.2097-6_2097-5delTT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 21/34 | INFO_REALIGN_3_PRIME | chrX | 124066143 | ||||||
| chrX:124066632 | ATTG | A | 130 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(127): Show |
130 | HG00140.hp1 HG00438.hp1 HG00438.hp2 others(127): Show |
intron_variant | MODIFIER | c.2265+202_2265+204d others(5): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | INFO_REALIGN_3_PRIME | chrX | 124066632 | ||||||
| chrX:124066805 | T | C | 1 | a0001c0001t0001g0268 | 1 | HG02071.hp1 | intron_variant | MODIFIER | c.2265+369T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124066805 | |||||||
| chrX:124066813 | ATC | A | 131 | a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 others(128): Show |
131 | HG00140.hp1 HG00438.hp1 HG00438.hp2 others(128): Show |
intron_variant | MODIFIER | c.2265+383_2265+384d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | INFO_REALIGN_3_PRIME | chrX | 124066813 | ||||||
| chrX:124067010 | G | A | 271 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(268): Show |
272 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(269): Show |
intron_variant | MODIFIER | c.2265+574G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124067010 | |||||||
| chrX:124067039 | C | T | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.2265+603C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124067039 | |||||||
| chrX:124067207 | C | A | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.2265+771C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124067207 | |||||||
| chrX:124067321 | T | C | 2 | a0001c0001t0001g0120 a0001c0001t0002g0152 |
2 | HG01891.hp1 HG02886.hp2 |
intron_variant | MODIFIER | c.2265+885T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124067321 | |||||||
| chrX:124067373 | A | G | 1 | a0001c0001t0001g0145 | 1 | HG02622.hp2 | intron_variant | MODIFIER | c.2265+937A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124067373 | |||||||
| chrX:124067404 | A | G | 61 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(58): Show |
61 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(58): Show |
intron_variant | MODIFIER | c.2265+968A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124067404 | |||||||
| chrX:124068034 | CA | C | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.2266-518delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | INFO_REALIGN_3_PRIME | chrX | 124068034 | ||||||
| chrX:124068185 | A | C | 60 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(57): Show |
60 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(57): Show |
intron_variant | MODIFIER | c.2266-379A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124068185 | |||||||
| chrX:124068224 | C | T | 6 | a0001c0001t0001g0052 a0001c0001t0001g0093 a0001c0001t0001g0106 others(3): Show |
6 | HG01261.hp1 NA18947.hp2 NA18954.hp1 others(3): Show |
intron_variant | MODIFIER | c.2266-340C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124068224 | |||||||
| chrX:124068468 | C | CTATA | 10 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(7): Show |
10 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(7): Show |
intron_variant | MODIFIER | c.2266-93_2266-92ins others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | INFO_REALIGN_3_PRIME | chrX | 124068468 | ||||||
| chrX:124068506 | A | C | 2 | a0001c0001t0001g0211 a0001c0001t0001g0269 |
2 | HG01361.hp1 HG03239.hp1 |
intron_variant | MODIFIER | c.2266-58A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 23/34 | chrX | 124068506 | |||||||
| chrX:124068920 | G | A | 1 | a0001c0001t0002g0017 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.2358+264G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124068920 | |||||||
| chrX:124069137 | C | T | 5 | a0001c0001t0001g0190 a0001c0001t0001g0194 a0001c0001t0001g0195 others(2): Show |
5 | HG01884.hp1 HG02559.hp1 HG02895.hp1 others(2): Show |
intron_variant | MODIFIER | c.2358+481C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124069137 | |||||||
| chrX:124069182 | C | T | 1 | a0001c0001t0001g0106 | 1 | HG01261.hp1 | intron_variant | MODIFIER | c.2358+526C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124069182 | |||||||
| chrX:124069222 | C | CATGTTCA others(23): Show |
1 | a0001c0001t0001g0155 | 1 | NA19067.hp1 | intron_variant | MODIFIER | c.2358+569_2358+598d others(32): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | INFO_REALIGN_3_PRIME | chrX | 124069222 | ||||||
| chrX:124070332 | C | G | 1 | a0001c0001t0001g0172 | 1 | NA18977.hp1 | intron_variant | MODIFIER | c.2359-817C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124070332 | |||||||
| chrX:124070564 | A | G | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.2359-585A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124070564 | |||||||
| chrX:124070588 | G | A | 1 | a0001c0001t0001g0180 | 1 | HG01928.hp1 | intron_variant | MODIFIER | c.2359-561G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124070588 | |||||||
| chrX:124070636 | G | T | 67 | a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0072 others(64): Show |
67 | HG00558.hp2 HG00639.hp1 HG00642.hp1 others(64): Show |
intron_variant | MODIFIER | c.2359-513G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124070636 | |||||||
| chrX:124070799 | A | G | 1 | a0001c0001t0001g0166 | 1 | NA20129.hp1 | intron_variant | MODIFIER | c.2359-350A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124070799 | |||||||
| chrX:124070820 | G | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.2359-329G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124070820 | |||||||
| chrX:124070898 | A | T | 1 | a0001c0001t0002g0057 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.2359-251A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124070898 | |||||||
| chrX:124070921 | T | TA | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.2359-227dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | INFO_REALIGN_3_PRIME | chrX | 124070921 | ||||||
| chrX:124070983 | C | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.2359-166C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124070983 | |||||||
| chrX:124071086 | G | A | 1 | a0001c0001t0001g0082 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.2359-63G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 24/34 | chrX | 124071086 | |||||||
| chrX:124071540 | A | G | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.2533+217A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124071540 | |||||||
| chrX:124071628 | T | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.2533+305T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124071628 | |||||||
| chrX:124071745 | C | T | 4 | a0001c0001t0002g0005 a0001c0001t0002g0028 a0001c0001t0002g0036 others(1): Show |
4 | HG00609.hp1 HG02080.hp2 HG02132.hp1 others(1): Show |
intron_variant | MODIFIER | c.2533+422C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124071745 | |||||||
| chrX:124071940 | A | G | 84 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(81): Show |
84 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(81): Show |
intron_variant | MODIFIER | c.2533+617A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124071940 | |||||||
| chrX:124072024 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.2533+701A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072024 | |||||||
| chrX:124072076 | T | C | 2 | a0001c0001t0001g0236 a0001c0001t0001g0244 |
2 | HG03654.hp1 HG04184.hp1 |
intron_variant | MODIFIER | c.2533+753T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072076 | |||||||
| chrX:124072256 | C | T | 3 | a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 |
3 | HG02647.hp1 HG02896.hp2 HG02897.hp1 |
intron_variant | MODIFIER | c.2533+933C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072256 | |||||||
| chrX:124072257 | G | A | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.2533+934G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072257 | |||||||
| chrX:124072393 | A | C | 1 | a0001c0001t0001g0113 | 1 | HG01256.hp1 | intron_variant | MODIFIER | c.2533+1070A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072393 | |||||||
| chrX:124072450 | C | G | 2 | a0001c0001t0002g0018 a0001c0001t0002g0033 |
2 | HG03491.hp1 HG03492.hp1 |
intron_variant | MODIFIER | c.2533+1127C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072450 | |||||||
| chrX:124072501 | T | A | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.2533+1178T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072501 | |||||||
| chrX:124072683 | T | G | 99 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0050 others(96): Show |
100 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(97): Show |
intron_variant | MODIFIER | c.2533+1360T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072683 | |||||||
| chrX:124072691 | G | GT | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.2533+1370dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | INFO_REALIGN_3_PRIME | chrX | 124072691 | ||||||
| chrX:124072691 | G | GTTGT | 73 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(70): Show |
73 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(70): Show |
intron_variant | MODIFIER | c.2533+1391_2533+139 others(8): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | INFO_REALIGN_3_PRIME | chrX | 124072691 | ||||||
| chrX:124072880 | T | C | 9 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(6): Show |
9 | HG00597.hp2 HG02135.hp1 HG02451.hp1 others(6): Show |
intron_variant | MODIFIER | c.2533+1557T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072880 | |||||||
| chrX:124072904 | C | CT | 12 | a0001c0001t0001g0052 a0001c0001t0001g0076 a0001c0001t0001g0095 others(9): Show |
12 | HG01123.hp1 HG01175.hp1 HG01346.hp2 others(9): Show |
intron_variant | MODIFIER | c.2533+1601dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | INFO_REALIGN_3_PRIME | chrX | 124072904 | ||||||
| chrX:124072904 | CT | C | 23 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0013 others(20): Show |
23 | HG01243.hp1 HG01496.hp1 HG01884.hp2 others(20): Show |
intron_variant | MODIFIER | c.2533+1601delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | INFO_REALIGN_3_PRIME | chrX | 124072904 | ||||||
| chrX:124072904 | CTT | C | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.2533+1600_2533+160 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | INFO_REALIGN_3_PRIME | chrX | 124072904 | ||||||
| chrX:124072960 | G | T | 3 | a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0148 |
3 | HG01074.hp1 HG01256.hp1 NA20752.hp1 |
intron_variant | MODIFIER | c.2533+1637G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072960 | |||||||
| chrX:124072975 | C | T | 1 | a0001c0001t0001g0133 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.2533+1652C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124072975 | |||||||
| chrX:124073031 | CA | C | 4 | a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0126 others(1): Show |
4 | HG02027.hp1 NA18950.hp2 NA18968.hp2 others(1): Show |
intron_variant | MODIFIER | c.2533+1709delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073031 | |||||||
| chrX:124073040 | C | T | 1 | a0001c0001t0001g0124 | 1 | HG02040.hp1 | intron_variant | MODIFIER | c.2533+1717C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073040 | |||||||
| chrX:124073148 | C | T | 1 | a0001c0001t0002g0023 | 1 | HG00735.hp2 | intron_variant | MODIFIER | c.2533+1825C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073148 | |||||||
| chrX:124073154 | A | T | 261 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(258): Show |
262 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(259): Show |
intron_variant | MODIFIER | c.2533+1831A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073154 | |||||||
| chrX:124073192 | A | G | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.2533+1869A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073192 | |||||||
| chrX:124073378 | G | C | 1 | a0001c0001t0001g0189 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.2533+2055G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073378 | |||||||
| chrX:124073566 | C | T | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.2533+2243C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073566 | |||||||
| chrX:124073611 | C | G | 1 | a0001c0001t0002g0187 | 1 | HG02896.hp1 | intron_variant | MODIFIER | c.2533+2288C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073611 | |||||||
| chrX:124073693 | G | A | 2 | a0001c0001t0001g0112 a0001c0001t0001g0148 |
2 | HG01074.hp1 NA20752.hp1 |
intron_variant | MODIFIER | c.2533+2370G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073693 | |||||||
| chrX:124073982 | T | C | 3 | a0001c0001t0003g0134 a0001c0001t0003g0198 a0001c0001t0003g0205 |
3 | HG02055.hp1 HG02922.hp1 NA19240.hp2 |
intron_variant | MODIFIER | c.2534-2350T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124073982 | |||||||
| chrX:124074069 | A | G | 1 | a0001c0001t0002g0056 | 1 | NA20805.hp1 | intron_variant | MODIFIER | c.2534-2263A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124074069 | |||||||
| chrX:124074105 | G | C | 1 | a0001c0001t0001g0215 | 1 | NA18986.hp1 | intron_variant | MODIFIER | c.2534-2227G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124074105 | |||||||
| chrX:124074581 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.2534-1751A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124074581 | |||||||
| chrX:124074714 | T | C | 1 | a0001c0001t0002g0025 | 1 | NA18983.hp1 | intron_variant | MODIFIER | c.2534-1618T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124074714 | |||||||
| chrX:124074832 | T | C | 1 | a0001c0001t0001g0153 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.2534-1500T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124074832 | |||||||
| chrX:124074880 | G | A | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.2534-1452G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124074880 | |||||||
| chrX:124074900 | A | C | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.2534-1432A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124074900 | |||||||
| chrX:124075368 | G | A | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.2534-964G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124075368 | |||||||
| chrX:124075396 | C | T | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.2534-936C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124075396 | |||||||
| chrX:124075591 | T | A | 5 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(2): Show |
5 | HG01884.hp2 HG02630.hp2 HG02976.hp1 others(2): Show |
intron_variant | MODIFIER | c.2534-741T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 25/34 | chrX | 124075591 | |||||||
| chrX:124076795 | A | C | 1 | a0001c0001t0001g0228 | 1 | NA19090.hp2 | intron_variant | MODIFIER | c.2673+324A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 26/34 | chrX | 124076795 | |||||||
| chrX:124077168 | C | T | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.2673+697C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 26/34 | chrX | 124077168 | |||||||
| chrX:124077250 | G | GT | 12 | a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0050 others(9): Show |
13 | HG01496.hp2 HG01928.hp1 HG02630.hp1 others(10): Show |
intron_variant | MODIFIER | c.2674-694dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 26/34 | INFO_REALIGN_3_PRIME | chrX | 124077250 | ||||||
| chrX:124077517 | A | G | 2 | a0001c0001t0001g0236 a0001c0001t0001g0244 |
2 | HG03654.hp1 HG04184.hp1 |
intron_variant | MODIFIER | c.2674-440A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 26/34 | chrX | 124077517 | |||||||
| chrX:124077822 | T | A | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.2674-135T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 26/34 | chrX | 124077822 | |||||||
| chrX:124078349 | CTT | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.2775+294_2775+295d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | INFO_REALIGN_3_PRIME | chrX | 124078349 | ||||||
| chrX:124078577 | G | A | 190 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0050 others(187): Show |
191 | HG00438.hp2 HG00558.hp2 HG00597.hp2 others(188): Show |
intron_variant | MODIFIER | c.2775+519G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124078577 | |||||||
| chrX:124078798 | G | A | 1 | a0001c0001t0001g0265 | 1 | HG00438.hp2 | intron_variant | MODIFIER | c.2775+740G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124078798 | |||||||
| chrX:124078851 | C | T | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.2775+793C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124078851 | |||||||
| chrX:124078876 | C | T | 1 | a0001c0001t0001g0013 | 1 | NA20129.hp2 | intron_variant | MODIFIER | c.2775+818C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124078876 | |||||||
| chrX:124079141 | T | C | 1 | a0001c0001t0001g0009 | 1 | HG02630.hp2 | intron_variant | MODIFIER | c.2775+1083T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124079141 | |||||||
| chrX:124079379 | T | G | 5 | a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 others(2): Show |
5 | HG02257.hp2 HG02258.hp1 HG02723.hp1 others(2): Show |
intron_variant | MODIFIER | c.2775+1321T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124079379 | |||||||
| chrX:124079432 | C | T | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.2775+1374C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124079432 | |||||||
| chrX:124079777 | C | T | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.2776-1603C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124079777 | |||||||
| chrX:124079933 | CT | C | 50 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(47): Show |
50 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(47): Show |
intron_variant | MODIFIER | c.2776-1435delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | INFO_REALIGN_3_PRIME | chrX | 124079933 | ||||||
| chrX:124080206 | T | C | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.2776-1174T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124080206 | |||||||
| chrX:124080391 | T | C | 1 | a0001c0001t0001g0095 | 1 | HG02135.hp1 | intron_variant | MODIFIER | c.2776-989T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124080391 | |||||||
| chrX:124080603 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.2776-777G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124080603 | |||||||
| chrX:124080741 | A | G | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.2776-639A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124080741 | |||||||
| chrX:124081061 | G | A | 3 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0060 |
3 | HG01346.hp1 HG02273.hp2 NA20300.hp1 |
intron_variant | MODIFIER | c.2776-319G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | chrX | 124081061 | |||||||
| chrX:124081097 | T | TC | 191 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(188): Show |
192 | HG00438.hp2 HG00558.hp2 HG00597.hp2 others(189): Show |
intron_variant | MODIFIER | c.2776-279dupC | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 27/34 | INFO_REALIGN_3_PRIME | chrX | 124081097 | ||||||
| chrX:124081689 | A | G | 1 | a0001c0001t0001g0070 | 1 | HG03209.hp1 | intron_variant | MODIFIER | c.2924+161A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | chrX | 124081689 | |||||||
| chrX:124081721 | C | T | 1 | a0001c0001t0001g0262 | 1 | HG02074.hp1 | intron_variant | MODIFIER | c.2924+193C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | chrX | 124081721 | |||||||
| chrX:124082147 | CAGAT | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.2924+623_2924+626d others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | INFO_REALIGN_3_PRIME | chrX | 124082147 | ||||||
| chrX:124082267 | A | G | 1 | a0001c0001t0003g0134 | 1 | NA19240.hp2 | intron_variant | MODIFIER | c.2924+739A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | chrX | 124082267 | |||||||
| chrX:124082474 | G | C | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.2924+946G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | chrX | 124082474 | |||||||
| chrX:124082983 | G | T | 1 | a0001c0001t0001g0084 | 1 | HG01993.hp2 | intron_variant | MODIFIER | c.2925-438G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | chrX | 124082983 | |||||||
| chrX:124083017 | G | A | 59 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(56): Show |
59 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(56): Show |
intron_variant | MODIFIER | c.2925-404G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | chrX | 124083017 | |||||||
| chrX:124083206 | T | TTG | 111 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0048 others(108): Show |
112 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(109): Show |
intron_variant | MODIFIER | c.2925-199_2925-198d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | INFO_REALIGN_3_PRIME | chrX | 124083206 | ||||||
| chrX:124083238 | A | G | 1 | a0001c0001t0001g0190 | 1 | HG01884.hp1 | intron_variant | MODIFIER | c.2925-183A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 28/34 | chrX | 124083238 | |||||||
| chrX:124083560 | G | T | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.3053+11G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124083560 | |||||||
| chrX:124083677 | A | G | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.3053+128A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124083677 | |||||||
| chrX:124083928 | G | A | 2 | a0001c0001t0001g0211 a0001c0001t0001g0269 |
2 | HG01361.hp1 HG03239.hp1 |
intron_variant | MODIFIER | c.3053+379G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124083928 | |||||||
| chrX:124084021 | C | A | 1 | a0001c0001t0001g0133 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.3053+472C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084021 | |||||||
| chrX:124084149 | C | T | 1 | a0001c0001t0002g0024 | 1 | HG01257.hp2 | intron_variant | MODIFIER | c.3053+600C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084149 | |||||||
| chrX:124084279 | C | T | 5 | a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 others(2): Show |
5 | NA18975.hp2 NA18979.hp1 NA19000.hp1 others(2): Show |
intron_variant | MODIFIER | c.3053+730C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084279 | |||||||
| chrX:124084320 | G | C | 4 | a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(1): Show |
4 | HG02451.hp1 HG02622.hp1 HG03540.hp1 others(1): Show |
intron_variant | MODIFIER | c.3053+771G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084320 | |||||||
| chrX:124084354 | A | T | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.3053+805A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084354 | |||||||
| chrX:124084393 | ACTGCAAA others(2): Show |
A | 42 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0020 others(39): Show |
42 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(39): Show |
intron_variant | MODIFIER | c.3053+849_3053+857d others(11): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | INFO_REALIGN_3_PRIME | chrX | 124084393 | ||||||
| chrX:124084544 | G | C | 260 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(257): Show |
261 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(258): Show |
intron_variant | MODIFIER | c.3053+995G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084544 | |||||||
| chrX:124084565 | A | C | 1 | a0001c0001t0001g0074 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.3053+1016A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084565 | |||||||
| chrX:124084669 | T | G | 83 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(80): Show |
83 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(80): Show |
intron_variant | MODIFIER | c.3053+1120T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084669 | |||||||
| chrX:124084884 | T | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.3053+1335T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084884 | |||||||
| chrX:124084958 | A | G | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.3053+1409A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124084958 | |||||||
| chrX:124085064 | A | G | 3 | a0001c0001t0001g0078 a0001c0001t0001g0119 a0001c0001t0001g0135 |
3 | HG00642.hp1 HG01192.hp1 HG02273.hp1 |
intron_variant | MODIFIER | c.3054-1483A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085064 | |||||||
| chrX:124085183 | A | G | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.3054-1364A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085183 | |||||||
| chrX:124085387 | G | A | 2 | a0001c0001t0001g0050 a0001c0001t0001g0180 |
2 | HG01496.hp2 HG01928.hp1 |
intron_variant | MODIFIER | c.3054-1160G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085387 | |||||||
| chrX:124085556 | A | G | 3 | a0001c0001t0001g0079 a0001c0001t0001g0179 a0001c0001t0001g0262 |
3 | HG02074.hp1 NA18612.hp1 NA18995.hp1 |
intron_variant | MODIFIER | c.3054-991A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085556 | |||||||
| chrX:124085572 | C | T | 1 | a0001c0001t0001g0085 | 1 | NA19079.hp1 | intron_variant | MODIFIER | c.3054-975C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085572 | |||||||
| chrX:124085593 | G | A | 1 | a0001c0001t0001g0233 | 1 | NA18962.hp1 | intron_variant | MODIFIER | c.3054-954G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085593 | |||||||
| chrX:124085641 | A | G | 261 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(258): Show |
262 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(259): Show |
intron_variant | MODIFIER | c.3054-906A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085641 | |||||||
| chrX:124085655 | A | G | 4 | a0001c0001t0001g0004 a0001c0001t0001g0077 a0001c0001t0001g0266 others(1): Show |
4 | HG02071.hp1 NA18991.hp2 NA19058.hp1 others(1): Show |
intron_variant | MODIFIER | c.3054-892A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085655 | |||||||
| chrX:124085676 | G | A | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.3054-871G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085676 | |||||||
| chrX:124085773 | CA | C | 104 | a0001c0001t0001g0048 a0001c0001t0001g0073 a0001c0001t0001g0074 others(101): Show |
104 | HG00280.hp1 HG00597.hp1 HG00621.hp1 others(101): Show |
intron_variant | MODIFIER | c.3054-751delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | INFO_REALIGN_3_PRIME | chrX | 124085773 | ||||||
| chrX:124085773 | CAA | C | 141 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(138): Show |
142 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(139): Show |
intron_variant | MODIFIER | c.3054-752_3054-751d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | INFO_REALIGN_3_PRIME | chrX | 124085773 | ||||||
| chrX:124085834 | T | C | 60 | a0001c0001t0001g0004 a0001c0001t0001g0077 a0001c0001t0001g0100 others(57): Show |
60 | HG00438.hp2 HG00621.hp1 HG01123.hp1 others(57): Show |
intron_variant | MODIFIER | c.3054-713T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124085834 | |||||||
| chrX:124086135 | A | G | 2 | a0001c0001t0001g0088 a0001c0001t0001g0178 |
2 | HG02109.hp1 HG02809.hp2 |
intron_variant | MODIFIER | c.3054-412A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124086135 | |||||||
| chrX:124086156 | G | GA | 257 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(254): Show |
258 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(255): Show |
intron_variant | MODIFIER | c.3054-381dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | INFO_REALIGN_3_PRIME | chrX | 124086156 | ||||||
| chrX:124086281 | C | CT | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.3054-260dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | INFO_REALIGN_3_PRIME | chrX | 124086281 | ||||||
| chrX:124086533 | G | A | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.3054-14G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 29/34 | chrX | 124086533 | |||||||
| chrX:124087247 | A | G | 5 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(2): Show |
5 | HG01884.hp2 HG02630.hp2 HG02976.hp1 others(2): Show |
intron_variant | MODIFIER | c.3277+477A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124087247 | |||||||
| chrX:124087600 | C | T | 1 | a0001c0001t0001g0090 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.3277+830C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124087600 | |||||||
| chrX:124087658 | G | A | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.3277+888G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124087658 | |||||||
| chrX:124088148 | T | C | 1 | a0001c0001t0001g0113 | 1 | HG01256.hp1 | intron_variant | MODIFIER | c.3277+1378T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124088148 | |||||||
| chrX:124088417 | T | C | 46 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(43): Show |
46 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(43): Show |
intron_variant | MODIFIER | c.3277+1647T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124088417 | |||||||
| chrX:124088424 | A | G | 1 | a0001c0001t0001g0271 | 1 | HG01517.hp1 | intron_variant | MODIFIER | c.3277+1654A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124088424 | |||||||
| chrX:124088615 | C | CT | 102 | a0001c0001t0001g0003 a0001c0001t0001g0048 a0001c0001t0001g0050 others(99): Show |
102 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(99): Show |
intron_variant | MODIFIER | c.3277+1863dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124088615 | ||||||
| chrX:124088615 | CT | C | 69 | a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0100 others(66): Show |
69 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(66): Show |
intron_variant | MODIFIER | c.3277+1863delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124088615 | ||||||
| chrX:124088616 | T | C | 45 | a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0010 others(42): Show |
45 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(42): Show |
intron_variant | MODIFIER | c.3277+1846T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124088616 | |||||||
| chrX:124088617 | T | C | 1 | a0001c0001t0001g0007 | 1 | NA20300.hp1 | intron_variant | MODIFIER | c.3277+1847T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124088617 | |||||||
| chrX:124088741 | A | C | 1 | a0001c0001t0001g0269 | 1 | HG01361.hp1 | intron_variant | MODIFIER | c.3278-1834A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124088741 | |||||||
| chrX:124088913 | C | CT | 254 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(251): Show |
255 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(252): Show |
intron_variant | MODIFIER | c.3278-1647dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124088913 | ||||||
| chrX:124088920 | T | TTTTTTTT others(3): Show |
1 | a0001c0001t0001g0091 | 1 | HG02165.hp2 | intron_variant | MODIFIER | c.3278-1647_3278-164 others(14): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124088920 | ||||||
| chrX:124089154 | C | A | 1 | a0001c0001t0001g0066 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.3278-1421C>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124089154 | |||||||
| chrX:124089435 | T | A | 103 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0048 others(100): Show |
104 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(101): Show |
intron_variant | MODIFIER | c.3278-1140T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124089435 | |||||||
| chrX:124089475 | A | G | 4 | a0001c0001t0002g0014 a0001c0001t0002g0023 a0001c0001t0002g0039 others(1): Show |
4 | HG00140.hp1 HG00735.hp2 HG02056.hp1 others(1): Show |
intron_variant | MODIFIER | c.3278-1100A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124089475 | |||||||
| chrX:124089486 | G | A | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.3278-1089G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124089486 | |||||||
| chrX:124089729 | T | C | 1 | a0001c0001t0002g0026 | 1 | HG03704.hp2 | intron_variant | MODIFIER | c.3278-846T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124089729 | |||||||
| chrX:124089782 | A | G | 69 | a0001c0001t0001g0048 a0001c0001t0001g0051 a0001c0001t0001g0052 others(66): Show |
69 | HG00558.hp2 HG00639.hp1 HG00642.hp1 others(66): Show |
intron_variant | MODIFIER | c.3278-793A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124089782 | |||||||
| chrX:124090114 | T | C | 2 | a0001c0001t0001g0211 a0001c0001t0001g0269 |
2 | HG01361.hp1 HG03239.hp1 |
intron_variant | MODIFIER | c.3278-461T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124090114 | |||||||
| chrX:124090160 | C | CA | 44 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0009 others(41): Show |
45 | HG00597.hp2 HG01175.hp2 HG01358.hp1 others(42): Show |
intron_variant | MODIFIER | c.3278-389dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124090160 | ||||||
| chrX:124090160 | C | CAA | 6 | a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0143 others(3): Show |
6 | HG01928.hp1 HG02280.hp1 HG04228.hp1 others(3): Show |
intron_variant | MODIFIER | c.3278-390_3278-389d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124090160 | ||||||
| chrX:124090160 | C | CAAA | 8 | a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 others(5): Show |
8 | HG02451.hp1 HG02622.hp1 HG03491.hp2 others(5): Show |
intron_variant | MODIFIER | c.3278-391_3278-389d others(5): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124090160 | ||||||
| chrX:124090160 | C | CAAAA | 81 | a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0051 others(78): Show |
81 | HG00438.hp2 HG00621.hp1 HG00639.hp1 others(78): Show |
intron_variant | MODIFIER | c.3278-392_3278-389d others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124090160 | ||||||
| chrX:124090160 | C | CAAAAA | 30 | a0001c0001t0001g0052 a0001c0001t0001g0085 a0001c0001t0001g0090 others(27): Show |
30 | HG01099.hp1 HG01175.hp1 HG01361.hp1 others(27): Show |
intron_variant | MODIFIER | c.3278-393_3278-389d others(7): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124090160 | ||||||
| chrX:124090160 | CA | C | 14 | a0001c0001t0001g0020 a0001c0001t0001g0049 a0001c0001t0001g0070 others(11): Show |
14 | HG01993.hp1 HG02056.hp1 HG02148.hp2 others(11): Show |
intron_variant | MODIFIER | c.3278-389delA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124090160 | ||||||
| chrX:124090160 | CAA | C | 35 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0060 others(32): Show |
35 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(32): Show |
intron_variant | MODIFIER | c.3278-390_3278-389d others(4): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124090160 | ||||||
| chrX:124090160 | CAAAAAAA others(4): Show |
C | 1 | a0001c0003t0001g0061 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.3278-399_3278-389d others(13): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | INFO_REALIGN_3_PRIME | chrX | 124090160 | ||||||
| chrX:124090187 | G | T | 36 | a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0079 others(33): Show |
36 | HG00639.hp1 HG00735.hp1 HG00738.hp1 others(33): Show |
intron_variant | MODIFIER | c.3278-388G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 30/34 | chrX | 124090187 | |||||||
| chrX:124092175 | T | A | 1 | a0001c0001t0001g0160 | 1 | HG03704.hp1 | intron_variant | MODIFIER | c.3578+1211T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124092175 | |||||||
| chrX:124092415 | G | A | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.3578+1451G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124092415 | |||||||
| chrX:124092555 | C | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.3579-1463C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124092555 | |||||||
| chrX:124092640 | A | G | 47 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(44): Show |
47 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(44): Show |
intron_variant | MODIFIER | c.3579-1378A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124092640 | |||||||
| chrX:124092668 | C | T | 1 | a0001c0001t0001g0142 | 1 | HG00639.hp1 | intron_variant | MODIFIER | c.3579-1350C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124092668 | |||||||
| chrX:124092794 | T | A | 1 | a0001c0001t0001g0185 | 1 | HG02257.hp2 | intron_variant | MODIFIER | c.3579-1224T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124092794 | |||||||
| chrX:124092984 | G | A | 82 | a0001c0001t0001g0004 a0001c0001t0001g0073 a0001c0001t0001g0077 others(79): Show |
82 | HG00438.hp2 HG00621.hp1 HG00639.hp2 others(79): Show |
intron_variant | MODIFIER | c.3579-1034G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124092984 | |||||||
| chrX:124093017 | T | C | 1 | a0001c0001t0001g0270 | 1 | HG02280.hp1 | intron_variant | MODIFIER | c.3579-1001T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124093017 | |||||||
| chrX:124093225 | T | A | 60 | a0001c0001t0001g0004 a0001c0001t0001g0077 a0001c0001t0001g0100 others(57): Show |
60 | HG00438.hp2 HG00621.hp1 HG01123.hp1 others(57): Show |
intron_variant | MODIFIER | c.3579-793T>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124093225 | |||||||
| chrX:124093472 | C | CT | 5 | a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0203 others(2): Show |
5 | HG01192.hp1 HG02486.hp1 HG02572.hp1 others(2): Show |
intron_variant | MODIFIER | c.3579-526dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | INFO_REALIGN_3_PRIME | chrX | 124093472 | ||||||
| chrX:124093472 | CT | C | 63 | a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(60): Show |
63 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(60): Show |
intron_variant | MODIFIER | c.3579-526delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | INFO_REALIGN_3_PRIME | chrX | 124093472 | ||||||
| chrX:124093525 | G | T | 1 | a0001c0001t0001g0208 | 1 | HG02723.hp2 | intron_variant | MODIFIER | c.3579-493G>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124093525 | |||||||
| chrX:124093598 | A | T | 1 | a0001c0001t0001g0153 | 1 | HG01433.hp1 | intron_variant | MODIFIER | c.3579-420A>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124093598 | |||||||
| chrX:124093745 | A | G | 1 | a0001c0001t0001g0191 | 1 | NA19065.hp1 | intron_variant | MODIFIER | c.3579-273A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124093745 | |||||||
| chrX:124093754 | T | C | 49 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(46): Show |
49 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(46): Show |
intron_variant | MODIFIER | c.3579-264T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 32/34 | chrX | 124093754 | |||||||
| chrX:124094198 | A | G | 7 | a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 others(4): Show |
7 | HG01952.hp1 HG02280.hp2 HG02647.hp1 others(4): Show |
intron_variant | MODIFIER | c.3705+54A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 33/34 | chrX | 124094198 | |||||||
| chrX:124094678 | C | G | 4 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 others(1): Show |
4 | HG02258.hp1 HG02723.hp1 HG02896.hp1 others(1): Show |
intron_variant | MODIFIER | c.3705+534C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 33/34 | chrX | 124094678 | |||||||
| chrX:124094731 | C | G | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.3705+587C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 33/34 | chrX | 124094731 | |||||||
| chrX:124094806 | T | C | 1 | a0001c0001t0005g0149 | 1 | NA19068.hp1 | intron_variant | MODIFIER | c.3706-566T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 33/34 | chrX | 124094806 | |||||||
| chrX:124094903 | C | T | 1 | a0001c0001t0002g0260 | 1 | NA19064.hp2 | intron_variant | MODIFIER | c.3706-469C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 33/34 | chrX | 124094903 | |||||||
| chrX:124094935 | G | GT | 52 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(49): Show |
52 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(49): Show |
intron_variant | MODIFIER | c.3706-427dupT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 33/34 | INFO_REALIGN_3_PRIME | chrX | 124094935 | ||||||
| chrX:124095174 | G | A | 1 | a0001c0001t0001g0118 | 1 | NA18984.hp1 | intron_variant | MODIFIER | c.3706-198G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 33/34 | chrX | 124095174 | |||||||
| chrX:124095216 | C | T | 2 | a0001c0001t0001g0211 a0001c0001t0001g0269 |
2 | HG01361.hp1 HG03239.hp1 |
intron_variant | MODIFIER | c.3706-156C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 33/34 | chrX | 124095216 | |||||||
| chrX:124095545 | T | C | 2 | a0001c0001t0001g0089 a0001c0001t0001g0164 |
2 | HG02451.hp2 HG02818.hp1 |
intron_variant | MODIFIER | c.3783+96T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124095545 | |||||||
| chrX:124095943 | G | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.3783+494G>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124095943 | |||||||
| chrX:124096018 | C | G | 2 | a0001c0001t0001g0211 a0001c0001t0001g0269 |
2 | HG01361.hp1 HG03239.hp1 |
intron_variant | MODIFIER | c.3783+569C>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124096018 | |||||||
| chrX:124096092 | G | A | 252 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(249): Show |
253 | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(250): Show |
intron_variant | MODIFIER | c.3783+643G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124096092 | |||||||
| chrX:124096176 | AT | A | 50 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(47): Show |
50 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(47): Show |
intron_variant | MODIFIER | c.3783+734delT | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | INFO_REALIGN_3_PRIME | chrX | 124096176 | ||||||
| chrX:124096183 | T | TC | 10 | a0001c0001t0001g0002 a0001c0001t0001g0009 a0001c0001t0001g0064 others(7): Show |
10 | HG01496.hp1 HG01884.hp2 HG02630.hp2 others(7): Show |
intron_variant | MODIFIER | c.3783+741dupC | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | INFO_REALIGN_3_PRIME | chrX | 124096183 | ||||||
| chrX:124096500 | T | C | 1 | a0001c0001t0002g0016 | 1 | HG03490.hp1 | intron_variant | MODIFIER | c.3783+1051T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124096500 | |||||||
| chrX:124096900 | C | T | 3 | a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0270 |
3 | HG02280.hp1 HG02818.hp2 HG02976.hp2 |
intron_variant | MODIFIER | c.3783+1451C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124096900 | |||||||
| chrX:124097057 | C | T | 46 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0010 others(43): Show |
46 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(43): Show |
intron_variant | MODIFIER | c.3783+1608C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124097057 | |||||||
| chrX:124097144 | A | C | 3 | a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 |
3 | HG00280.hp1 HG01123.hp2 HG01175.hp2 |
intron_variant | MODIFIER | c.3783+1695A>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124097144 | |||||||
| chrX:124097179 | C | CA | 168 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(165): Show |
169 | HG00558.hp2 HG00621.hp1 HG00639.hp1 others(166): Show |
intron_variant | MODIFIER | c.3783+1755dupA | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | INFO_REALIGN_3_PRIME | chrX | 124097179 | ||||||
| chrX:124097179 | C | CAA | 75 | a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(72): Show |
75 | HG00140.hp1 HG00438.hp1 HG00438.hp2 others(72): Show |
intron_variant | MODIFIER | c.3783+1754_3783+175 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | INFO_REALIGN_3_PRIME | chrX | 124097179 | ||||||
| chrX:124097179 | C | CAAA | 16 | a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 others(13): Show |
16 | HG00558.hp1 HG00735.hp2 HG02148.hp2 others(13): Show |
intron_variant | MODIFIER | c.3783+1753_3783+175 others(7): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | INFO_REALIGN_3_PRIME | chrX | 124097179 | ||||||
| chrX:124097861 | C | T | 2 | a0001c0001t0002g0057 a0001c0001t0002g0058 |
2 | HG00280.hp1 HG01123.hp2 |
intron_variant | MODIFIER | c.3783+2412C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124097861 | |||||||
| chrX:124097903 | G | A | 1 | a0001c0001t0001g0068 | 1 | HG01243.hp1 | intron_variant | MODIFIER | c.3783+2454G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124097903 | |||||||
| chrX:124097956 | T | C | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.3783+2507T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124097956 | |||||||
| chrX:124098065 | T | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.3784-2509T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124098065 | |||||||
| chrX:124098085 | T | C | 1 | a0001c0001t0001g0119 | 1 | HG02273.hp1 | intron_variant | MODIFIER | c.3784-2489T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124098085 | |||||||
| chrX:124098342 | G | A | 48 | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(45): Show |
48 | HG00140.hp1 HG00438.hp1 HG00558.hp1 others(45): Show |
intron_variant | MODIFIER | c.3784-2232G>A | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124098342 | |||||||
| chrX:124098354 | CTT | C | 3 | a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0002g0187 |
3 | HG02723.hp1 HG02896.hp1 HG03486.hp1 |
intron_variant | MODIFIER | c.3784-2218_3784-221 others(6): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | INFO_REALIGN_3_PRIME | chrX | 124098354 | ||||||
| chrX:124099259 | C | T | 1 | a0001c0001t0001g0049 | 1 | HG02559.hp2 | intron_variant | MODIFIER | c.3784-1315C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124099259 | |||||||
| chrX:124099307 | T | C | 4 | a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 others(1): Show |
4 | HG00280.hp1 HG01123.hp2 HG01175.hp2 others(1): Show |
intron_variant | MODIFIER | c.3784-1267T>C | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124099307 | |||||||
| chrX:124099577 | T | G | 107 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0048 others(104): Show |
108 | HG00558.hp2 HG00597.hp2 HG00639.hp1 others(105): Show |
intron_variant | MODIFIER | c.3784-997T>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124099577 | |||||||
| chrX:124100425 | A | G | 1 | a0001c0001t0001g0089 | 1 | HG02451.hp2 | intron_variant | MODIFIER | c.3784-149A>G | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124100425 | |||||||
| chrX:124100542 | C | T | 2 | a0001c0001t0001g0089 a0001c0001t0001g0164 |
2 | HG02451.hp2 HG02818.hp1 |
intron_variant | MODIFIER | c.3784-32C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124100542 | |||||||
| chrX:124100555 | C | T | 1 | a0001c0001t0001g0008 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.3784-19C>T | STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 34/34 | chrX | 124100555 |