view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SYNPR_chr3_63273308_63621924 | 63388556 | TTGTGTG | T | intron_variant | MODIFIER | HG00423.hp2 HG00544.hp1 HG00558.hp1 others(34): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0002 a0001c0001t0001g0038 a0001c0001t0001g0042 others(34): Show |
37 | 246 | 0.1504 | -6 | c.85- others(23): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNPR_chr3_63273308_63621924 | 63494393 | TTATATA | T | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00609.hp2 others(31): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0019 others(31): Show |
34 | 246 | 0.1382 | -6 | c.209 others(25): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNPR_chr3_63273308_63621924 | 63494460 | CATATAT | C | intron_variant | MODIFIER | HG00597.hp1 HG00621.hp2 HG02165.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(1): Show | a0001c0001t0001g0069 a0001c0001t0001g0195 a0001c0001t0001g0198 others(6): Show |
9 | 246 | 0.0366 | -6 | c.209 others(25): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNPR_chr3_63273308_63621924 | 63494500 | TATATAC | T | intron_variant | MODIFIER | HG00597.hp1 HG00621.hp2 HG02165.hp2 others(8): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(2): Show | a0001c0001t0001g0069 a0001c0001t0001g0195 a0001c0001t0001g0198 others(8): Show |
11 | 246 | 0.0447 | -6 | c.209 others(25): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNPR_chr3_63273308_63621924 | 63524824 | AGTGTGT | A | intron_variant | MODIFIER | HG01070.hp1 HG02055.hp2 HG02258.hp1 others(10): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0016 a0001c0001t0001g0042 a0001c0001t0001g0090 others(10): Show |
13 | 246 | 0.0529 | -6 | c.210 others(25): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNPR_chr3_63273308_63621924 | 63524870 | TGAGAGA | T | intron_variant | MODIFIER | HG00099.hp2 HG00642.hp2 HG00735.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0083 a0001c0001t0001g0097 a0001c0001t0001g0119 others(7): Show |
10 | 246 | 0.0407 | -6 | c.210 others(25): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNPR_chr3_63273308_63621924 | 63563974 | GAAAAAA | G | intron_variant | MODIFIER | HG00323.hp1 HG00323.hp2 HG00423.hp2 others(84): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0005 a0001c0001t0001g0041 a0001c0001t0001g0042 others(84): Show |
87 | 246 | 0.3537 | -6 | c.408 others(23): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNPR_chr3_63273308_63621924 | 63579788 | AACACAC | A | intron_variant | MODIFIER | HG01175.hp1 HG02886.hp1 NA19043.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005 | a0001c0001t0001g0157 a0001c0001t0001g0208 a0001c0001t0002g0092 others(1): Show |
4 | 246 | 0.0163 | -6 | c.408 others(25): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNPR_chr3_63273308_63621924 | 63595717 | TTATATA | T | intron_variant | MODIFIER | HG00642.hp1 HG00735.hp2 HG01106.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0083 a0001c0001t0002g0092 a0001c0001t0003g0088 others(1): Show |
4 | 246 | 0.0163 | -6 | c.409 others(25): Show |
SYNPR | ENSG00000163630.11 | transcript | ENST00000478300.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SYNRG_chr17_37509807_37614418 | 37540815 | AGTAGAT | A | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp2 HG00544.hp2 others(80): Show |
a0001a0002a0008others(2): Show | a0001c0016a0002c0002a0002c0011others(3): Show | a0001c0016t0006a0002c0002t0001a0002c0002t0002others(12): Show | a0001c0016t0006g0336 a0002c0002t0001g0201 a0002c0002t0001g0234 others(80): Show |
83 | 349 | 0.2378 | -6 | c.320 others(23): Show |
SYNRG | ENSG00000275066.5 | transcript | ENST00000612223.5 | protein_coding | 15/21 | chr17 | TogoVar | |||||||
SYS1_chr20_45358156_45374209 | 45369596 | CTTTTTT | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00408.hp1 others(123): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0007others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0008 others(17): Show |
126 | 386 | 0.3264 | -6 | c.*24 others(17): Show |
SYS1 | ENSG00000204070.10 | transcript | ENST00000243918.10 | protein_coding | 388 | chr20 | TogoVar | |||||||
SYT10_chr12_33369238_33444819 | 33378814 | CTGTGTG | C | intron_variant | MODIFIER | HG00639.hp1 HG01070.hp2 HG01071.hp2 others(38): Show |
a0001a0006 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0006a0001c0001t0007a0001c0001t0030others(6): Show | a0001c0001t0006g0040 a0001c0001t0007g0030 a0001c0001t0030g0226 others(37): Show |
41 | 320 | 0.1281 | -6 | c.150 others(25): Show |
SYT10 | ENSG00000110975.8 | transcript | ENST00000228567.7 | protein_coding | 6/6 | chr12 | TogoVar | |||||||
SYT10_chr12_33369238_33444819 | 33392985 | TAAAAAA | T | intron_variant | MODIFIER | HG01256.hp2 HG01258.hp2 HG01934.hp1 others(16): Show |
a0001a0003 | a0001c0002a0001c0003a0001c0005others(1): Show | a0001c0002t0004a0001c0002t0031a0001c0003t0005others(3): Show | a0001c0002t0004g0018 a0001c0002t0004g0019 a0001c0002t0004g0265 others(14): Show |
19 | 320 | 0.0594 | -6 | c.107 others(25): Show |
SYT10 | ENSG00000110975.8 | transcript | ENST00000228567.7 | protein_coding | 3/6 | chr12 | TogoVar | |||||||
SYT10_chr12_33369238_33444819 | 33426062 | TCACACA | T | intron_variant | MODIFIER | HG00639.hp1 HG00741.hp2 HG01070.hp2 others(40): Show |
a0001a0006 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0004others(4): Show | a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0091 others(37): Show |
43 | 320 | 0.1344 | -6 | c.509 others(19): Show |
SYT10 | ENSG00000110975.8 | transcript | ENST00000228567.7 | protein_coding | 2/6 | chr12 | TogoVar | |||||||
SYT11_chr1_155854567_155890199 | 155866987 | CACACAT | C | intron_variant | MODIFIER | HG00140.hp1 HG01433.hp2 HG01975.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 others(4): Show |
7 | 314 | 0.0223 | -6 | c.35- others(19): Show |
SYT11 | ENSG00000132718.9 | transcript | ENST00000368324.5 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SYT13_chr11_45235302_45291341 | 45236611 | CTGTGTG | C | downstream_gene_variant | MODIFIER | HG02056.hp2 HG02280.hp2 HG02486.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0014a0001c0001t0029others(1): Show | a0001c0001t0008g0045 a0001c0001t0014g0027 a0001c0001t0029g0273 others(1): Show |
5 | 366 | 0.0137 | -6 | c.*74 others(17): Show |
SYT13 | ENSG00000019505.8 | transcript | ENST00000020926.8 | protein_coding | 3690 | chr11 | TogoVar | |||||||
SYT13_chr11_45235302_45291341 | 45262721 | TCACACA | T | intron_variant | MODIFIER | HG01243.hp1 HG02273.hp1 HG02723.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007a0001c0001t0016 | a0001c0001t0001g0157 a0001c0001t0007g0057 a0001c0001t0007g0060 others(2): Show |
5 | 366 | 0.0137 | -6 | c.184 others(23): Show |
SYT13 | ENSG00000019505.8 | transcript | ENST00000020926.8 | protein_coding | 1/5 | chr11 | TogoVar | |||||||
SYT13_chr11_45235302_45291341 | 45262764 | CACACAA | C | intron_variant | MODIFIER | HG00408.hp2 HG00544.hp2 HG00609.hp1 others(28): Show |
a0001a0007 | a0001c0001a0007c0005 | a0001c0001t0002a0001c0001t0009a0001c0001t0011others(2): Show | a0001c0001t0002g0001 a0001c0001t0002g0028 a0001c0001t0002g0029 others(17): Show |
31 | 366 | 0.0847 | -6 | c.184 others(23): Show |
SYT13 | ENSG00000019505.8 | transcript | ENST00000020926.8 | protein_coding | 1/5 | chr11 | TogoVar | |||||||
SYT14_chr1_209933217_210176315 | 209937558 | TGAGAGA | T | upstream_gene_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00544.hp2 others(89): Show |
a0001a0003 | a0001c0001a0003c0006 | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(22): Show | a0001c0001t0003g0146 a0001c0001t0003g0147 a0001c0001t0003g0148 others(89): Show |
92 | 358 | 0.2570 | -6 | c.-70 others(15): Show |
SYT14 | ENSG00000143469.21 | transcript | ENST00000367019.6 | protein_coding | 658 | chr1 | TogoVar | |||||||
SYT14_chr1_209933217_210176315 | 209950074 | TGTTACA | T | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00609.hp1 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0010a0001c0001t0011others(4): Show | a0001c0001t0009g0094 a0001c0001t0010g0004 a0001c0001t0010g0057 others(23): Show |
26 | 358 | 0.0726 | -6 | c.14- others(21): Show |
SYT14 | ENSG00000143469.21 | transcript | ENST00000367019.6 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SYT14_chr1_209933217_210176315 | 210059447 | TATATAG | T | intron_variant | MODIFIER | HG01257.hp2 HG02559.hp1 NA19066.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0031 | a0001c0001t0002g0106 a0001c0001t0002g0110 a0001c0001t0031g0104 |
3 | 358 | 0.0084 | -6 | c.443 others(25): Show |
SYT14 | ENSG00000143469.21 | transcript | ENST00000367019.6 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SYT14_chr1_209933217_210176315 | 210075577 | CCTGCCT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00621.hp1 others(32): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0003 | a0001c0001t0052a0002c0002t0008a0002c0002t0018others(6): Show | a0001c0001t0052g0306 a0002c0002t0008g0301 a0002c0002t0008g0303 others(32): Show |
35 | 358 | 0.0978 | -6 | c.443 others(25): Show |
SYT14 | ENSG00000143469.21 | transcript | ENST00000367019.6 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SYT14_chr1_209933217_210176315 | 210161320 | GTTAATT | G | 3_prime_UTR_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00544.hp2 others(104): Show |
a0001a0002a0003 | a0001c0001a0002c0003a0003c0006 | a0001c0001t0002a0001c0001t0004a0001c0001t0009others(24): Show | a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0030 others(104): Show |
107 | 358 | 0.2989 | -6 | c.*28 others(15): Show |
SYT14 | ENSG00000143469.21 | transcript | ENST00000367019.6 | protein_coding | 9/9 | 286 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SYT15B_chr10_47739717_47768592 | 47743313 | CACATAT | C | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00423.hp1 HG00438.hp1 others(88): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0002c0002others(7): Show | a0001c0001t0021a0001c0003t0027a0001c0003t0090others(30): Show | a0001c0001t0021g0029 a0001c0003t0027g0061 a0001c0003t0027g0074 others(44): Show |
91 | 340 | 0.2677 | -6 | c.*10 others(19): Show |
SYT15B | ENSG00000277758.6 | transcript | ENST00000615923.4 | protein_coding | 1403 | chr10 | TogoVar | |||||||
SYT15_chr10_46574128_46597064 | 46580680 | CTGTGTG | C | intron_variant | MODIFIER | HG00280.hp2 HG00597.hp2 HG00609.hp2 others(84): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0002a0001c0010others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(12): Show | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0010 others(35): Show |
87 | 284 | 0.3063 | -6 | c.213 others(21): Show |
SYT15 | ENSG00000204176.14 | transcript | ENST00000374321.9 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SYT15_chr10_46574128_46597064 | 46586850 | AAAAAAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(33): Show |
a0001a0002a0003others(1): Show | a0001c0002a0001c0009a0002c0004others(2): Show | a0001c0002t0002a0001c0002t0014a0001c0009t0002others(3): Show | a0001c0002t0002g0006 a0001c0002t0002g0016 a0001c0002t0002g0017 others(14): Show |
36 | 284 | 0.1268 | -6 | c.112 others(23): Show |
SYT15 | ENSG00000204176.14 | transcript | ENST00000374321.9 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 61858120 | CAAAAAA | C | intron_variant | MODIFIER | HG02280.hp1 HG02451.hp1 HG02717.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0002t0026others(1): Show | a0001c0001t0001g0038 a0001c0001t0003g0022 a0001c0001t0003g0037 others(4): Show |
7 | 174 | 0.0402 | -6 | c.-32 others(27): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 61953717 | TTCCTTA | T | intron_variant | MODIFIER | HG01081.hp1 HG01496.hp2 HG01884.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0034a0001c0001t0036 | a0001c0001t0005g0003 a0001c0001t0034g0001 a0001c0001t0036g0025 |
3 | 174 | 0.0172 | -6 | c.-32 others(27): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62039834 | TACACAC | T | intron_variant | MODIFIER | HG02040.hp1 HG02055.hp1 HG02145.hp2 others(16): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0013others(8): Show | a0001c0001t0003g0007 a0001c0001t0003g0022 a0001c0001t0003g0033 others(16): Show |
19 | 174 | 0.1092 | -6 | c.524 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT16_chr14_61807703_62117550 | 62092173 | AACACAC | A | intron_variant | MODIFIER | HG00639.hp2 HG01255.hp2 HG01515.hp1 others(11): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0051others(9): Show | a0001c0001t0001g0075 a0001c0001t0006g0137 a0001c0001t0006g0141 others(11): Show |
14 | 174 | 0.0805 | -6 | c.162 others(25): Show |
SYT16 | ENSG00000139973.18 | transcript | ENST00000683842.1 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19171289 | TATGATG | T | intron_variant | MODIFIER | HG01361.hp1 HG01891.hp1 HG01978.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0003a0001c0001t0005a0001c0001t0008others(5): Show | a0001c0001t0003g0223 a0001c0001t0005g0225 a0001c0001t0008g0222 others(5): Show |
8 | 324 | 0.0247 | -6 | c.16- others(21): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19190768 | CTGTGTG | C | intron_variant | MODIFIER | HG00280.hp1 HG01071.hp1 HG01109.hp1 others(50): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(29): Show | a0001c0001t0001g0091 a0001c0001t0001g0105 a0001c0001t0001g0118 others(50): Show |
53 | 324 | 0.1636 | -6 | c.951 others(23): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19197446 | GTTATTA | G | intron_variant | MODIFIER | HG00735.hp2 HG01074.hp1 HG01167.hp2 others(34): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0027 a0001c0001t0001g0075 a0001c0001t0001g0089 others(34): Show |
37 | 324 | 0.1142 | -6 | c.951 others(25): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19250359 | TTGTGTG | T | intron_variant | MODIFIER | HG02280.hp2 HG02572.hp1 HG03098.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0010a0001c0001t0012others(1): Show | a0001c0001t0005g0225 a0001c0001t0010g0062 a0001c0001t0012g0258 others(2): Show |
5 | 324 | 0.0154 | -6 | c.122 others(27): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19252464 | TATATAC | T | intron_variant | MODIFIER | HG00544.hp1 HG00673.hp2 HG01071.hp1 others(52): Show |
a0001 | a0001c0001a0001c0002a0001c0013 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(4): Show | a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0017 others(52): Show |
55 | 324 | 0.1698 | -6 | c.122 others(27): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19252512 | TATATAC | T | intron_variant | MODIFIER | HG01891.hp2 HG02258.hp1 HG02258.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0010a0001c0001t0012a0001c0001t0026others(10): Show | a0001c0001t0010g0038 a0001c0001t0012g0022 a0001c0001t0026g0007 others(10): Show |
13 | 324 | 0.0401 | -6 | c.122 others(27): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19252537 | ATATTTT | A | intron_variant | MODIFIER | HG02451.hp1 HG02976.hp2 NA18979.hp1 |
a0001 | a0001c0001 | a0001c0001t0025a0001c0001t0035 | a0001c0001t0025g0061 a0001c0001t0025g0316 a0001c0001t0035g0092 |
3 | 324 | 0.0093 | -6 | c.122 others(27): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19256437 | AACACAC | A | intron_variant | MODIFIER | HG02572.hp2 HG03098.hp1 HG03453.hp2 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0001t0008a0001c0001t0012others(3): Show | a0001c0001t0006g0217 a0001c0001t0006g0306 a0001c0001t0008g0083 others(4): Show |
7 | 324 | 0.0216 | -6 | c.122 others(27): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19256556 | CTATTAT | C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG01074.hp2 others(36): Show |
a0001 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0009others(11): Show | a0001c0001t0002g0076 a0001c0001t0002g0078 a0001c0001t0002g0080 others(36): Show |
39 | 324 | 0.1204 | -6 | c.122 others(27): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19260503 | CAAAAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(137): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(41): Show | a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 others(137): Show |
140 | 324 | 0.4321 | -6 | c.122 others(25): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SYT17_chr16_19163240_19273332 | 19267937 | AGTGTGT | A | 3_prime_UTR_variant | MODIFIER | HG02109.hp2 HG02622.hp2 HG02630.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0033a0001c0001t0046a0001c0001t0047others(4): Show | a0001c0001t0033g0256 a0001c0001t0046g0096 a0001c0001t0047g0288 others(4): Show |
7 | 324 | 0.0216 | -6 | c.*89 others(15): Show |
SYT17 | ENSG00000103528.17 | transcript | ENST00000355377.7 | protein_coding | 8/8 | 892 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SYT1_chr12_78859774_79457008 | 78894330 | GTTTTTT | G | intron_variant | MODIFIER | HG00741.hp1 HG01243.hp1 HG01243.hp2 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0008others(6): Show | a0001c0001t0001g0033 a0001c0001t0001g0039 a0001c0001t0001g0049 others(11): Show |
14 | 62 | 0.2258 | -6 | c.-21 others(27): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 78931173 | GAAAGAA | G | intron_variant | MODIFIER | HG00621.hp2 HG02717.hp2 HG02965.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0007a0001c0001t0016a0001c0002t0010 | a0001c0001t0007g0024 a0001c0001t0007g0030 a0001c0001t0016g0037 others(1): Show |
4 | 62 | 0.0645 | -6 | c.-21 others(27): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 78934173 | TACACAC | T | intron_variant | MODIFIER | HG01243.hp1 HG02647.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0039 a0001c0001t0003g0035 |
2 | 62 | 0.0323 | -6 | c.-21 others(27): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 78941394 | TACACAC | T | intron_variant | MODIFIER | HG01256.hp1 HG01258.hp2 HG02717.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0007a0001c0002t0021 | a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0007g0024 others(1): Show |
4 | 62 | 0.0645 | -6 | c.-21 others(27): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 78945468 | CTATATA | C | intron_variant | MODIFIER | HG01243.hp1 HG02647.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0039 a0001c0001t0003g0035 |
2 | 62 | 0.0323 | -6 | c.-21 others(27): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79026667 | TTATATA | T | intron_variant | MODIFIER | HG00741.hp2 HG02257.hp1 NA19240.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0008a0001c0002t0008 | a0001c0001t0001g0022 a0001c0001t0008g0060 a0001c0002t0008g0002 |
3 | 62 | 0.0484 | -6 | c.-83 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79117662 | CATATAT | C | intron_variant | MODIFIER | HG01256.hp1 HG02647.hp2 HG02922.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0007a0001c0001t0012others(3): Show | a0001c0001t0003g0025 a0001c0001t0007g0038 a0001c0001t0012g0021 others(3): Show |
6 | 62 | 0.0968 | -6 | c.-18 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79117710 | TATATAA | T | intron_variant | MODIFIER | HG01258.hp1 HG01258.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0011 | a0001c0001t0003g0026 a0001c0002t0011g0047 |
2 | 62 | 0.0323 | -6 | c.-18 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SYT1_chr12_78859774_79457008 | 79156442 | CTGTTGT | C | intron_variant | MODIFIER | HG01261.hp1 HG03225.hp1 NA18992.hp2 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(1): Show | a0001c0001t0001g0046 a0001c0001t0004g0003 a0001c0001t0009g0052 others(1): Show |
4 | 62 | 0.0645 | -6 | c.-17 others(25): Show |
SYT1 | ENSG00000067715.15 | transcript | ENST00000261205.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar |