view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCIMP_chr17_5203920_5239860 | 5209123 | GTTTATTT others(1): Show |
G | 3_prime_UTR_variant | MODIFIER | HG02615.hp1 HG02615.hp2 HG02717.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0008a0001c0002t0008a0001c0002t0017 | a0001c0001t0008g0080 a0001c0001t0008g0342 a0001c0002t0008g0031 others(2): Show |
5 | 386 | 0.0130 | -8 | c.*16 others(19): Show |
SCIMP | ENSG00000161929.15 | transcript | ENST00000574081.6 | protein_coding | 5/5 | 1670 | chr17 | TogoVar | ||||||
SCIN_chr7_12565720_12665182 | 12569183 | GACACACA others(1): Show |
G | upstream_gene_variant | MODIFIER | HG00597.hp2 HG01109.hp1 HG01257.hp1 others(34): Show |
a0001a0002a0007others(1): Show | a0001c0001a0002c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(33): Show | a0001c0001t0001g0028 a0001c0001t0002g0036 a0001c0001t0003g0015 others(33): Show |
37 | 372 | 0.0995 | -8 | c.-16 others(19): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 1536 | chr7 | TogoVar | |||||||
SCIN_chr7_12565720_12665182 | 12599370 | AGTGTGTG others(1): Show |
A | intron_variant | MODIFIER | HG00544.hp2 HG01106.hp2 HG01167.hp2 others(43): Show |
a0001a0002a0005others(1): Show | a0001c0001a0002c0002a0002c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0034others(43): Show | a0001c0001t0001g0123 a0001c0001t0002g0052 a0001c0001t0034g0170 others(43): Show |
46 | 372 | 0.1237 | -8 | c.517 others(25): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 3/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SCIN_chr7_12565720_12665182 | 12628032 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG01433.hp1 HG03834.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0125a0001c0001t0262a0002c0002t0001others(1): Show | a0001c0001t0125g0163 a0001c0001t0262g0012 a0002c0002t0001g0253 others(1): Show |
4 | 372 | 0.0108 | -8 | c.119 others(27): Show |
SCIN | ENSG00000006747.15 | transcript | ENST00000297029.10 | protein_coding | 8/15 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SCLT1_chr4_128878993_129098539 | 128894363 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | NA18948.hp2 NA18974.hp2 NA18997.hp1 |
a0001a0002a0003 | a0001c0004a0002c0003a0003c0005 | a0001c0004t0001a0002c0003t0001a0003c0005t0001 | a0001c0004t0001g0029 a0002c0003t0001g0208 a0003c0005t0001g0160 |
3 | 288 | 0.0104 | -8 | c.183 others(27): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 18/20 | chr4 | TogoVar | |||||||
SCLT1_chr4_128878993_129098539 | 129039900 | GCACACAC others(1): Show |
G | intron_variant | MODIFIER | HG02280.hp2 NA18522.hp1 NA19240.hp2 others(1): Show |
a0001a0006 | a0001c0002a0001c0011a0006c0012 | a0001c0002t0001a0001c0011t0010a0006c0012t0001 | a0001c0002t0001g0055 a0001c0002t0001g0060 a0001c0011t0010g0284 others(1): Show |
4 | 288 | 0.0139 | -8 | c.235 others(23): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 4/20 | chr4 | TogoVar | |||||||
SCLT1_chr4_128878993_129098539 | 129086313 | GTATATAT others(1): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(179): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0004others(9): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0007others(11): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(176): Show |
182 | 288 | 0.6319 | -8 | c.35- others(23): Show |
SCLT1 | ENSG00000151466.12 | transcript | ENST00000281142.10 | protein_coding | 1/20 | chr4 | TogoVar | |||||||
SCMH1_chr1_41022202_41247306 | 41073618 | TCATCCAT others(1): Show |
T | intron_variant | MODIFIER | HG01168.hp1 HG02280.hp2 HG02559.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0003g0114 |
3 | 304 | 0.0099 | -8 | c.978 others(25): Show |
SCMH1 | ENSG00000010803.17 | transcript | ENST00000695335.1 | protein_coding | 9/15 | chr1 | TogoVar | |||||||
SCMH1_chr1_41022202_41247306 | 41073680 | ACCTACCC others(1): Show |
A | intron_variant | MODIFIER | HG02055.hp1 HG02257.hp2 HG02809.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0170 a0001c0001t0001g0175 a0001c0001t0001g0176 others(1): Show |
4 | 304 | 0.0132 | -8 | c.978 others(25): Show |
SCMH1 | ENSG00000010803.17 | transcript | ENST00000695335.1 | protein_coding | 9/15 | chr1 | TogoVar | |||||||
SCML1_chrX_17732493_17759985 | 17737422 | GCCCCCCC others(1): Show |
G | upstream_gene_variant | MODIFIER | HG00673.hp1 HG01109.hp1 HG01433.hp1 others(18): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(13): Show |
21 | 281 | 0.0747 | -8 | c.-37 others(17): Show |
SCML1 | ENSG00000047634.15 | transcript | ENST00000380041.8 | protein_coding | 70 | chrX | TogoVar | |||||||
SCML1_chrX_17732493_17759985 | 17745828 | GTCAGTTT others(1): Show |
G | intron_variant | MODIFIER | HG00423.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0036 | 1 | 281 | 0.0036 | -8 | c.118 others(23): Show |
SCML1 | ENSG00000047634.15 | transcript | ENST00000380041.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SCML2_chrX_18234313_18359688 | 18264431 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG02132.hp1 HG02622.hp2 others(6): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0008 a0001c0001t0001g0100 a0001c0001t0001g0111 others(6): Show |
9 | 247 | 0.0364 | -8 | c.948 others(25): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 8/14 | chrX | TogoVar | |||||||
SCML2_chrX_18234313_18359688 | 18313000 | TGTGTGTG others(1): Show |
T | intron_variant | MODIFIER | NA19089.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0026 | 1 | 247 | 0.0041 | -8 | c.486 others(25): Show |
SCML2 | ENSG00000102098.19 | transcript | ENST00000251900.9 | protein_coding | 6/14 | chrX | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107751572 | ATCTTTCT others(1): Show |
A | intron_variant | MODIFIER | HG00544.hp2 HG00735.hp2 HG01081.hp2 others(27): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0117 a0001c0001t0001g0159 a0001c0001t0002g0187 others(27): Show |
30 | 250 | 0.1200 | -8 | c.157 others(25): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 2/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107787396 | TCACTCAG others(1): Show |
T | intron_variant | MODIFIER | HG01891.hp2 HG02280.hp1 HG02886.hp2 others(2): Show |
a0001 | a0001c0001a0001c0008a0001c0011 | a0001c0001t0001a0001c0001t0006a0001c0001t0013others(2): Show | a0001c0001t0001g0070 a0001c0001t0006g0071 a0001c0001t0013g0068 others(2): Show |
5 | 250 | 0.0200 | -8 | c.-59 others(27): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107802576 | GAGGGAGG others(1): Show |
G | intron_variant | MODIFIER | HG00438.hp2 HG01099.hp1 HG02572.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(7): Show | a0001c0001t0002g0062 a0001c0001t0002g0065 a0001c0001t0004g0054 others(10): Show |
13 | 250 | 0.0520 | -8 | c.-60 others(27): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107813417 | TATATATA others(1): Show |
T | intron_variant | MODIFIER | HG02165.hp2 HG02257.hp1 HG02451.hp1 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(2): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(6): Show | a0001c0001t0002g0214 a0001c0001t0004g0215 a0001c0001t0006g0157 others(7): Show |
10 | 250 | 0.0400 | -8 | c.-60 others(27): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar | |||||||
SCML4_chr6_107697154_107829313 | 107824462 | CTGTGTGT others(1): Show |
C | upstream_gene_variant | MODIFIER | HG00558.hp1 HG00639.hp2 HG00642.hp2 others(43): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0105 a0001c0001t0001g0114 a0001c0001t0001g0147 others(43): Show |
46 | 250 | 0.1840 | -8 | c.-40 others(17): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 150 | chr6 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38736361 | CTGTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG01261.hp1 NA18953.hp2 NA18991.hp2 others(2): Show |
a0004a0005 | a0004c0005a0004c0063a0005c0011others(1): Show | a0004c0005t0001a0004c0063t0001a0005c0011t0001others(1): Show | a0004c0005t0001g0170 a0004c0063t0001g0314 a0005c0011t0001g0141 others(2): Show |
5 | 372 | 0.0134 | -8 | c.228 others(27): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 15/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38737765 | CCTCCCTC others(1): Show |
C | intron_variant | MODIFIER | HG00639.hp1 HG00642.hp1 HG00673.hp1 others(28): Show |
a0001a0007a0016others(1): Show | a0001c0004a0001c0031a0001c0032others(5): Show | a0001c0004t0001a0001c0004t0006a0001c0031t0002others(6): Show | a0001c0004t0001g0007 a0001c0004t0001g0009 a0001c0004t0001g0017 others(27): Show |
31 | 372 | 0.0833 | -8 | c.228 others(27): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 15/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38741289 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG00639.hp1 HG00642.hp1 HG00673.hp1 others(33): Show |
a0001a0007a0016others(1): Show | a0001c0003a0001c0004a0001c0031others(6): Show | a0001c0003t0002a0001c0004t0001a0001c0004t0006others(7): Show | a0001c0003t0002g0251 a0001c0004t0001g0007 a0001c0004t0001g0009 others(32): Show |
36 | 372 | 0.0968 | -8 | c.210 others(26): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 14/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38743249 | CCTGGTAT others(1): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00597.hp1 others(53): Show |
a0002a0004a0005others(4): Show | a0002c0001a0004c0005a0004c0020others(11): Show | a0002c0001t0001a0004c0005t0001a0004c0020t0001others(14): Show | a0002c0001t0001g0063 a0004c0005t0001g0021 a0004c0005t0001g0067 others(53): Show |
56 | 372 | 0.1505 | -8 | c.186 others(25): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 13/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38761837 | TGAGAGAG others(1): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG00642.hp1 HG00673.hp1 others(39): Show |
a0001a0003a0007others(3): Show | a0001c0004a0001c0008a0001c0031others(7): Show | a0001c0004t0001a0001c0004t0006a0001c0008t0001others(8): Show | a0001c0004t0001g0007 a0001c0004t0001g0009 a0001c0004t0001g0017 others(38): Show |
42 | 372 | 0.1129 | -8 | c.692 others(23): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 6/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38772718 | CAACAACA others(1): Show |
C | intron_variant | MODIFIER | HG01109.hp1 HG01884.hp1 HG02622.hp1 others(1): Show |
a0001a0002 | a0001c0003a0002c0012 | a0001c0003t0002a0002c0012t0001 | a0001c0003t0002g0098 a0001c0003t0002g0099 a0001c0003t0002g0131 others(1): Show |
4 | 372 | 0.0108 | -8 | c.471 others(25): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 4/27 | chr3 | TogoVar | |||||||
SCN10A_chr3_38691807_38821217 | 38772722 | AACAAAAA others(1): Show |
A | intron_variant | MODIFIER | HG02922.hp2 HG03195.hp2 HG03225.hp1 |
a0001 | a0001c0007 | a0001c0007t0001 | a0001c0007t0001g0364 a0001c0007t0001g0365 a0001c0007t0001g0366 |
3 | 372 | 0.0081 | -8 | c.471 others(25): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 4/27 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38907310 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00558.hp2 others(46): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0003a0001c0002t0001a0001c0002t0002others(3): Show | a0001c0001t0003g0283 a0001c0002t0001g0148 a0001c0002t0001g0149 others(46): Show |
49 | 314 | 0.1561 | -8 | c.147 others(25): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 14/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38907357 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(139): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0015a0001c0020others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0100 a0001c0001t0001g0131 a0001c0001t0001g0132 others(139): Show |
142 | 314 | 0.4522 | -8 | c.147 others(25): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 14/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38938509 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG02129.hp1 NA18945.hp2 |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0002a0001c0002t0001a0003c0004t0001 | a0001c0001t0002g0121 a0001c0002t0001g0157 a0003c0004t0001g0233 |
3 | 314 | 0.0096 | -8 | c.488 others(25): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38963424 | GATATATA others(1): Show |
G | intron_variant | MODIFIER | HG01192.hp1 HG01516.hp2 HG01517.hp2 others(12): Show |
a0001 | a0001c0006 | a0001c0006t0001a0001c0006t0003a0001c0006t0006 | a0001c0006t0001g0313 a0001c0006t0003g0290 a0001c0006t0003g0291 others(12): Show |
15 | 314 | 0.0478 | -8 | c.-27 others(27): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38981537 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG01934.hp2 HG02258.hp1 HG02280.hp2 others(8): Show |
a0001 | a0001c0002a0001c0009a0001c0011others(2): Show | a0001c0002t0004a0001c0002t0014a0001c0009t0007others(3): Show | a0001c0002t0004g0262 a0001c0002t0014g0199 a0001c0009t0007g0200 others(8): Show |
11 | 314 | 0.0350 | -8 | c.-27 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38987301 | TCTCACAC others(1): Show |
T | intron_variant | MODIFIER | HG02630.hp1 HG03654.hp1 NA18950.hp1 |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0001a0001c0002t0004a0002c0003t0001 | a0001c0002t0001g0165 a0001c0002t0004g0262 a0002c0003t0001g0008 |
3 | 314 | 0.0096 | -8 | c.-27 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38987303 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG00642.hp1 HG01074.hp2 HG01109.hp1 others(53): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0015others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0215 a0001c0001t0002g0004 a0001c0001t0002g0017 others(53): Show |
56 | 314 | 0.1783 | -8 | c.-27 others(29): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 39025968 | GACAAAAA others(1): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG01081.hp1 others(5): Show |
a0001a0003a0004 | a0001c0001a0003c0008a0004c0013 | a0001c0001t0002a0003c0008t0001a0004c0013t0001 | a0001c0001t0002g0130 a0001c0001t0002g0137 a0001c0001t0002g0138 others(5): Show |
8 | 314 | 0.0255 | -8 | c.-28 others(27): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 165989028 | CTGTGTGT others(1): Show |
C | 3_prime_UTR_variant | MODIFIER | HG02257.hp2 HG02559.hp2 HG02622.hp2 others(13): Show |
a0001a0002 | a0001c0001a0001c0011a0002c0002 | a0001c0001t0006a0001c0001t0021a0001c0001t0061others(2): Show | a0001c0001t0006g0159 a0001c0001t0006g0160 a0001c0001t0006g0286 others(13): Show |
16 | 356 | 0.0449 | -8 | c.*22 others(19): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 29/29 | 2209 | chr2 | TogoVar | ||||||
SCN1A_chr2_165980813_166133020 | 165989061 | TGTGTGTG others(1): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00544.hp1 HG00558.hp2 HG00609.hp2 others(24): Show |
a0001a0002a0008 | a0001c0001a0002c0002a0002c0017others(1): Show | a0001c0001t0017a0001c0001t0019a0001c0001t0047others(6): Show | a0001c0001t0017g0018 a0001c0001t0017g0028 a0001c0001t0017g0056 others(24): Show |
27 | 356 | 0.0758 | -8 | c.*21 others(19): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 29/29 | 2176 | chr2 | TogoVar | ||||||
SCN1A_chr2_165980813_166133020 | 165993206 | TGTGTGAG others(1): Show |
T | intron_variant | MODIFIER | HG01496.hp2 HG02486.hp2 HG02723.hp1 others(6): Show |
a0001a0010 | a0001c0003a0001c0010a0010c0009 | a0001c0003t0020a0001c0003t0034a0001c0003t0087others(3): Show | a0001c0003t0020g0163 a0001c0003t0020g0342 a0001c0003t0020g0345 others(6): Show |
9 | 356 | 0.0253 | -8 | c.485 others(25): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 28/28 | chr2 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 165994650 | AAAACAAA others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00544.hp2 others(72): Show |
a0001a0009 | a0001c0001a0001c0008a0001c0021others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(13): Show | a0001c0001t0002g0105 a0001c0001t0003g0013 a0001c0001t0003g0094 others(71): Show |
75 | 356 | 0.2107 | -8 | c.458 others(25): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 27/28 | chr2 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166054006 | AAAGGAAA others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00408.hp1 others(82): Show |
a0001a0004 | a0001c0001a0001c0006a0001c0011others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(17): Show | a0001c0001t0001g0124 a0001c0001t0001g0147 a0001c0001t0002g0002 others(81): Show |
85 | 356 | 0.2388 | -8 | c.602 others(23): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 7/28 | chr2 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166103449 | TTAAATAA others(1): Show |
T | intron_variant | MODIFIER | HG01123.hp2 HG02257.hp1 HG03041.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0031a0001c0003t0087a0002c0002t0010others(1): Show | a0001c0001t0031g0346 a0001c0001t0031g0347 a0001c0003t0087g0328 others(3): Show |
6 | 356 | 0.0169 | -8 | c.-14 others(29): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 2/28 | chr2 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166120596 | CTTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00423.hp1 others(55): Show |
a0001a0002a0004 | a0001c0001a0001c0004a0001c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0124 a0001c0001t0002g0002 a0001c0001t0002g0085 others(54): Show |
58 | 356 | 0.1629 | -8 | c.-14 others(27): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 2/28 | chr2 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165265471 | CTATATAT others(1): Show |
C | intron_variant | MODIFIER | HG01106.hp2 HG01256.hp2 HG01515.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0002a0001c0002t0001a0001c0004t0004others(2): Show | a0001c0001t0002g0193 a0001c0001t0002g0266 a0001c0001t0002g0267 others(7): Show |
10 | 358 | 0.0279 | -8 | c.-52 others(27): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291345 | GTCGTTCG others(1): Show |
G | intron_variant | MODIFIER | HG02280.hp1 HG02451.hp2 HG02559.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0013 | a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0325 others(1): Show |
4 | 358 | 0.0112 | -8 | c.-51 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291348 | GTTCGTTC others(1): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00438.hp1 HG00733.hp2 others(64): Show |
a0001a0002 | a0001c0001a0001c0007a0001c0008others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0024 a0001c0001t0001g0042 a0001c0001t0001g0246 others(64): Show |
67 | 358 | 0.1872 | -8 | c.-51 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291352 | GTTCCTTC others(1): Show |
G | intron_variant | MODIFIER | HG00423.hp2 HG01081.hp2 HG01255.hp2 others(9): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0005 | a0001c0002t0001g0039 a0001c0002t0001g0043 a0001c0002t0001g0054 others(9): Show |
12 | 358 | 0.0335 | -8 | c.-51 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291486 | CTTTCTTT others(1): Show |
C | intron_variant | MODIFIER | NA18951.hp2 NA18959.hp1 NA18993.hp1 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0001 a0001c0002t0001g0005 a0001c0002t0001g0009 others(1): Show |
5 | 358 | 0.0140 | -8 | c.-51 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165291487 | TTTCTTTT others(1): Show |
T | intron_variant | MODIFIER | HG00438.hp1 HG00741.hp1 HG01074.hp2 others(9): Show |
a0001a0002 | a0001c0001a0001c0008a0001c0019others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0083 a0001c0001t0001g0297 a0001c0001t0001g0322 others(9): Show |
12 | 358 | 0.0335 | -8 | c.-51 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291525 | TTTCCTTC others(1): Show |
T | intron_variant | MODIFIER | HG00642.hp1 HG00733.hp1 HG01071.hp1 others(31): Show |
a0001 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(5): Show | a0001c0001t0001g0166 a0001c0001t0001g0202 a0001c0001t0001g0333 others(31): Show |
34 | 358 | 0.0950 | -8 | c.-51 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291571 | TCCTTTCT others(1): Show |
T | intron_variant | MODIFIER | HG00673.hp2 NA18945.hp2 NA18959.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0038 a0001c0001t0002g0145 a0001c0001t0002g0147 others(1): Show |
4 | 358 | 0.0112 | -8 | c.-51 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165306504 | TTGTGTGT others(1): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG00673.hp2 HG01496.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002a0001c0010 | a0001c0001t0002a0001c0002t0001a0001c0010t0001 | a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0161 others(9): Show |
12 | 358 | 0.0335 | -8 | c.387 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165353911 | ATATTTAT others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00733.hp2 HG01070.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0011 | a0001c0001t0002g0129 a0001c0001t0002g0189 a0001c0001t0002g0190 others(3): Show |
6 | 358 | 0.0168 | -8 | c.292 others(25): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 16/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |