view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SHCBP1L_chr1_182894865_182958166 | 182904534 | CGTGTGTG others(1): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02818.hp1 HG02896.hp2 others(2): Show |
a0006a0010 | a0006c0007a0010c0012 | a0006c0007t0001a0010c0012t0001 | a0006c0007t0001g0297 a0006c0007t0001g0298 a0006c0007t0001g0300 others(2): Show |
5 | 302 | 0.0166 | -8 | c.133 others(25): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 7/9 | chr1 | TogoVar | |||||||
SHCBP1L_chr1_182894865_182958166 | 182913138 | AAATTAAT others(1): Show |
A | intron_variant | MODIFIER | HG01069.hp2 HG01884.hp1 NA21309.hp1 |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0070 a0001c0003t0001g0071 a0001c0003t0001g0072 |
3 | 302 | 0.0099 | -8 | c.118 others(27): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 6/9 | chr1 | TogoVar | |||||||
SHCBP1L_chr1_182894865_182958166 | 182924701 | GAAGAAAG others(1): Show |
G | intron_variant | MODIFIER | HG00544.hp1 HG01361.hp1 HG01433.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0098 others(12): Show |
15 | 302 | 0.0497 | -8 | c.118 others(27): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 6/9 | chr1 | TogoVar | |||||||
SHCBP1L_chr1_182894865_182958166 | 182927050 | CTATATAT others(1): Show |
C | intron_variant | MODIFIER | HG01106.hp2 HG01884.hp2 HG02622.hp2 others(4): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0006 | a0001c0001t0001a0002c0002t0001a0003c0006t0001 | a0001c0001t0001g0081 a0001c0001t0001g0087 a0001c0001t0001g0269 others(4): Show |
7 | 302 | 0.0232 | -8 | c.118 others(27): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 6/9 | chr1 | TogoVar | |||||||
SHCBP1L_chr1_182894865_182958166 | 182930547 | GTGTGTAT others(1): Show |
G | intron_variant | MODIFIER | HG01884.hp1 HG03710.hp2 HG04199.hp2 others(1): Show |
a0001a0006 | a0001c0003a0006c0007 | a0001c0003t0001a0006c0007t0001 | a0001c0003t0001g0066 a0001c0003t0001g0069 a0001c0003t0001g0072 others(1): Show |
4 | 302 | 0.0133 | -8 | c.107 others(25): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 5/9 | chr1 | TogoVar | |||||||
SHCBP1L_chr1_182894865_182958166 | 182930551 | GTATATAT others(1): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00423.hp2 others(42): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0004c0004t0001 | a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 others(42): Show |
45 | 302 | 0.1490 | -8 | c.107 others(25): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 5/9 | chr1 | TogoVar | |||||||
SHCBP1L_chr1_182894865_182958166 | 182930653 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG02451.hp2 HG02559.hp1 HG03195.hp2 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0074 a0001c0001t0001g0277 a0001c0001t0001g0285 others(1): Show |
4 | 302 | 0.0133 | -8 | c.107 others(25): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 5/9 | chr1 | TogoVar | |||||||
SHCBP1L_chr1_182894865_182958166 | 182952229 | TATATATA others(1): Show |
T | intron_variant | MODIFIER | HG00673.hp2 HG01496.hp1 NA18962.hp1 others(2): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0004c0004t0001 | a0001c0001t0001g0125 a0001c0001t0001g0126 a0004c0004t0001g0124 others(2): Show |
5 | 302 | 0.0166 | -8 | c.405 others(23): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 1/9 | chr1 | TogoVar | |||||||
SHCBP1L_chr1_182894865_182958166 | 182952235 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG01069.hp2 HG01884.hp1 HG03540.hp1 others(5): Show |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0065 a0001c0003t0001g0066 a0001c0003t0001g0067 others(5): Show |
8 | 302 | 0.0265 | -8 | c.405 others(23): Show |
SHCBP1L | ENSG00000157060.16 | transcript | ENST00000367547.8 | protein_coding | 1/9 | chr1 | TogoVar | |||||||
SHCBP1_chr16_46573591_46626379 | 46584299 | CCACACAC others(1): Show |
C | intron_variant | MODIFIER | HG00621.hp2 HG01257.hp2 HG01978.hp1 others(11): Show |
a0001a0003 | a0001c0001a0001c0006a0003c0004 | a0001c0001t0001a0001c0001t0005a0001c0006t0005others(1): Show | a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0040 others(11): Show |
14 | 184 | 0.0761 | -8 | c.146 others(25): Show |
SHCBP1 | ENSG00000171241.9 | transcript | ENST00000303383.8 | protein_coding | 10/12 | chr16 | TogoVar | |||||||
SHCBP1_chr16_46573591_46626379 | 46592951 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG01433.hp2 HG02615.hp2 HG02622.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0037 a0001c0001t0001g0055 a0001c0001t0001g0061 others(4): Show |
7 | 184 | 0.0380 | -8 | c.146 others(27): Show |
SHCBP1 | ENSG00000171241.9 | transcript | ENST00000303383.8 | protein_coding | 10/12 | chr16 | TogoVar | |||||||
SHD_chr19_4274266_4295722 | 4286226 | CTTTCTTT others(1): Show |
C | intron_variant | MODIFIER | HG01123.hp2 HG01346.hp2 HG01928.hp2 others(17): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0023 a0001c0001t0001g0178 a0001c0001t0001g0180 others(15): Show |
20 | 462 | 0.0433 | -8 | c.716 others(25): Show |
SHD | ENSG00000105251.11 | transcript | ENST00000543264.7 | protein_coding | 4/5 | chr19 | TogoVar | |||||||
SHD_chr19_4274266_4295722 | 4286227 | TTTCTTTT others(1): Show |
T | intron_variant | MODIFIER | HG01884.hp2 HG02109.hp2 HG02145.hp1 others(18): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0002c0002others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(6): Show | a0001c0001t0001g0021 a0001c0001t0001g0328 a0001c0001t0003g0035 others(15): Show |
21 | 462 | 0.0455 | -8 | c.716 others(25): Show |
SHD | ENSG00000105251.11 | transcript | ENST00000543264.7 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SHD_chr19_4274266_4295722 | 4287890 | TTTTGTTT others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00558.hp2 others(98): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0005a0001c0008others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0014 a0001c0001t0001g0023 a0001c0001t0001g0043 others(83): Show |
101 | 462 | 0.2186 | -8 | c.717 others(23): Show |
SHD | ENSG00000105251.11 | transcript | ENST00000543264.7 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SHD_chr19_4274266_4295722 | 4287905 | TGTTTGTT others(1): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG02451.hp2 HG02717.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0034 a0001c0001t0001g0145 a0001c0001t0003g0034 others(4): Show |
7 | 462 | 0.0152 | -8 | c.717 others(23): Show |
SHD | ENSG00000105251.11 | transcript | ENST00000543264.7 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SHFL_chr19_10081317_10098243 | 10087819 | TTGAATGA others(1): Show |
T | intron_variant | MODIFIER | HG00438.hp1 HG00741.hp1 HG01106.hp2 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0019 others(8): Show |
33 | 444 | 0.0743 | -8 | c.195 others(23): Show |
SHFL | ENSG00000130813.18 | transcript | ENST00000253110.16 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SHH_chr7_155794980_155817463 | 155802076 | CAAAAAAA others(1): Show |
C | 3_prime_UTR_variant | MODIFIER | HG00438.hp1 HG00733.hp1 HG01099.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0034a0001c0001t0074a0001c0001t0075others(3): Show | a0001c0001t0034g0028 a0001c0001t0074g0105 a0001c0001t0075g0140 others(3): Show |
7 | 414 | 0.0169 | -8 | c.*81 others(17): Show |
SHH | ENSG00000164690.8 | transcript | ENST00000297261.7 | protein_coding | 3/3 | 816 | chr7 | TogoVar | ||||||
SHISA2_chr13_26039597_26057016 | 26041102 | CAGACAGA others(1): Show |
C | downstream_gene_variant | MODIFIER | HG01496.hp2 HG01884.hp1 HG01884.hp2 others(16): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0006a0001c0001t0013a0001c0001t0019others(7): Show | a0001c0001t0006g0180 a0001c0001t0013g0026 a0001c0001t0013g0130 others(11): Show |
19 | 456 | 0.0417 | -8 | c.*54 others(19): Show |
SHISA2 | ENSG00000180730.5 | transcript | ENST00000319420.4 | protein_coding | 3494 | chr13 | TogoVar | |||||||
SHISA2_chr13_26039597_26057016 | 26049863 | AACACACA others(1): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00735.hp1 HG01167.hp2 others(23): Show |
a0001 | a0001c0003 | a0001c0003t0008a0001c0003t0009a0001c0003t0014others(4): Show | a0001c0003t0008g0004 a0001c0003t0008g0076 a0001c0003t0008g0250 others(8): Show |
26 | 456 | 0.0570 | -8 | c.334 others(23): Show |
SHISA2 | ENSG00000180730.5 | transcript | ENST00000319420.4 | protein_coding | 1/1 | chr13 | TogoVar | |||||||
SHISA6_chr17_11236213_11569063 | 11277241 | TTCTCTCT others(1): Show |
T | intron_variant | MODIFIER | HG02257.hp2 HG02559.hp2 HG02622.hp1 others(6): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0069 a0001c0001t0002g0079 a0001c0001t0004g0130 others(6): Show |
9 | 192 | 0.0469 | -8 | c.799 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11277280 | TCACACAC others(1): Show |
T | intron_variant | MODIFIER | HG00735.hp1 HG01884.hp1 HG02258.hp2 others(2): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0002a0001c0001t0008a0001c0001t0012others(2): Show | a0001c0001t0002g0022 a0001c0001t0008g0136 a0001c0001t0012g0118 others(2): Show |
5 | 192 | 0.0260 | -8 | c.799 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11279810 | AGAAAGAG others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(86): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(38): Show | a0001c0001t0001g0010 a0001c0001t0001g0016 a0001c0001t0001g0028 others(86): Show |
89 | 192 | 0.4635 | -8 | c.799 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11287286 | AAAGGAAG others(1): Show |
A | intron_variant | MODIFIER | HG01106.hp1 HG02922.hp1 HG03516.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0037a0001c0002t0002a0001c0003t0002 | a0001c0001t0037g0080 a0001c0002t0002g0090 a0001c0002t0002g0100 others(1): Show |
4 | 192 | 0.0208 | -8 | c.799 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11316413 | CTCTCTCT others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00423.hp1 others(44): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(23): Show | a0001c0001t0001g0051 a0001c0001t0001g0133 a0001c0001t0001g0134 others(44): Show |
47 | 192 | 0.2448 | -8 | c.799 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11382927 | CCTTTTTT others(1): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG02055.hp2 HG02886.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0012others(5): Show | a0001c0001t0001g0085 a0001c0001t0007g0002 a0001c0001t0012g0118 others(5): Show |
8 | 192 | 0.0417 | -8 | c.895 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | chr17 | TogoVar | |||||||
SHISA6_chr17_11236213_11569063 | 11388790 | TTATATAT others(1): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG01361.hp2 HG02109.hp2 others(6): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0002c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0010 a0001c0001t0001g0086 a0001c0001t0002g0029 others(6): Show |
9 | 192 | 0.0469 | -8 | c.895 others(25): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11423326 | TATAGATA others(1): Show |
T | intron_variant | MODIFIER | HG00738.hp1 HG01243.hp1 HG01884.hp2 others(13): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(12): Show | a0001c0001t0001g0085 a0001c0001t0004g0058 a0001c0001t0006g0181 others(13): Show |
16 | 192 | 0.0833 | -8 | c.895 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11480389 | TTGAGTGA others(1): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG00639.hp1 HG00738.hp1 others(50): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0016 a0001c0001t0001g0035 a0001c0001t0001g0059 others(50): Show |
53 | 192 | 0.2760 | -8 | c.896 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11481336 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00408.hp1 HG01106.hp1 others(24): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0056 a0001c0001t0002g0038 a0001c0001t0002g0150 others(24): Show |
27 | 192 | 0.1406 | -8 | c.896 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11515313 | AAAGGAAG others(1): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG02129.hp2 others(13): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0007 | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(5): Show | a0001c0001t0001g0024 a0001c0001t0001g0069 a0001c0001t0001g0144 others(13): Show |
16 | 192 | 0.0833 | -8 | c.896 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11518462 | AACACATA others(1): Show |
A | intron_variant | MODIFIER | HG03098.hp2 HG06807.hp2 |
a0002 | a0002c0005 | a0002c0005t0009 | a0002c0005t0009g0057 a0002c0005t0009g0077 |
2 | 192 | 0.0104 | -8 | c.896 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11526880 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG02040.hp1 HG02486.hp1 others(13): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0009others(8): Show | a0001c0001t0002g0061 a0001c0001t0003g0011 a0001c0001t0003g0148 others(13): Show |
16 | 192 | 0.0833 | -8 | c.896 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA6_chr17_11236213_11569063 | 11531211 | CTGTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG02055.hp2 HG02109.hp2 HG02145.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0003a0001c0001t0009a0001c0001t0013others(3): Show | a0001c0001t0003g0127 a0001c0001t0003g0153 a0001c0001t0009g0003 others(4): Show |
7 | 192 | 0.0365 | -8 | c.896 others(27): Show |
SHISA6 | ENSG00000188803.15 | transcript | ENST00000441885.8 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHISA7_chr19_55423740_55448300 | 55424136 | AATTTATT others(1): Show |
A | downstream_gene_variant | MODIFIER | HG01192.hp1 HG01891.hp2 HG02615.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0009a0001c0001t0011a0001c0001t0013others(1): Show | a0001c0001t0009g0038 a0001c0001t0009g0152 a0001c0001t0009g0153 others(5): Show |
12 | 372 | 0.0323 | -8 | c.*90 others(19): Show |
SHISA7 | ENSG00000187902.13 | transcript | ENST00000376325.10 | protein_coding | 4603 | chr19 | TogoVar | |||||||
SHISA7_chr19_55423740_55448300 | 55435229 | TGTGTGTG others(1): Show |
T | intron_variant | MODIFIER | HG01891.hp2 HG02258.hp2 HG02630.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0011a0001c0001t0028others(1): Show | a0001c0001t0003g0150 a0001c0001t0003g0168 a0001c0001t0003g0169 others(5): Show |
9 | 372 | 0.0242 | -8 | c.977 others(25): Show |
SHISA7 | ENSG00000187902.13 | transcript | ENST00000376325.10 | protein_coding | 3/3 | chr19 | TogoVar | |||||||
SHISA7_chr19_55423740_55448300 | 55446933 | CAAAAAAA others(1): Show |
C | upstream_gene_variant | MODIFIER | HG01109.hp2 HG01243.hp1 HG01884.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0008others(1): Show | a0001c0001t0002g0145 a0001c0001t0004g0015 a0001c0001t0004g0028 others(6): Show |
11 | 372 | 0.0296 | -8 | c.-40 others(19): Show |
SHISA7 | ENSG00000187902.13 | transcript | ENST00000376325.10 | protein_coding | 3634 | chr19 | TogoVar | |||||||
SHISA9_chr16_12896598_13245416 | 12970495 | ATATTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00597.hp2 HG02135.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007a0001c0001t0027 | a0001c0001t0001g0008 a0001c0001t0001g0192 a0001c0001t0007g0134 others(2): Show |
5 | 214 | 0.0234 | -8 | c.691 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 12970497 | ATTTTTTT others(1): Show |
A | intron_variant | MODIFIER | HG00438.hp1 HG01074.hp2 HG01258.hp2 others(13): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0011 a0001c0001t0001g0197 a0001c0001t0002g0012 others(13): Show |
16 | 214 | 0.0748 | -8 | c.691 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 12985241 | GTAAATAA others(1): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG02055.hp2 HG02559.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0002g0115 a0001c0001t0003g0191 a0001c0001t0004g0041 others(7): Show |
10 | 214 | 0.0467 | -8 | c.691 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13008657 | CCCTCCCT others(1): Show |
C | intron_variant | MODIFIER | HG00544.hp2 HG00558.hp1 HG01884.hp1 others(41): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0031 a0001c0001t0001g0120 a0001c0001t0001g0199 others(41): Show |
44 | 214 | 0.2056 | -8 | c.691 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13015853 | CCTTTCTT others(1): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG00738.hp2 HG01099.hp1 others(23): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(16): Show | a0001c0001t0001g0011 a0001c0001t0001g0092 a0001c0001t0002g0153 others(23): Show |
26 | 214 | 0.1215 | -8 | c.691 others(27): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13019764 | TTTTCTTT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(24): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(20): Show | a0001c0001t0001g0084 a0001c0001t0001g0142 a0001c0001t0002g0060 others(24): Show |
27 | 214 | 0.1262 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13019831 | TCTTTTTC others(1): Show |
T | intron_variant | MODIFIER | HG00738.hp1 HG01993.hp1 HG03098.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0011a0001c0001t0027others(1): Show | a0001c0001t0002g0045 a0001c0001t0011g0126 a0001c0001t0027g0014 others(1): Show |
4 | 214 | 0.0187 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | chr16 | TogoVar | |||||||
SHISA9_chr16_12896598_13245416 | 13019844 | TTCCCTCC others(1): Show |
T | intron_variant | MODIFIER | HG03654.hp1 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0058 a0001c0001t0001g0089 |
2 | 214 | 0.0094 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13019878 | CCCTCCCT others(1): Show |
C | intron_variant | MODIFIER | HG03130.hp1 HG03710.hp2 NA18979.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0002a0001c0001t0003a0001c0001t0008others(2): Show | a0001c0001t0002g0213 a0001c0001t0003g0096 a0001c0001t0008g0128 others(2): Show |
5 | 214 | 0.0234 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13019882 | CCCTTCTT others(1): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00639.hp1 HG02083.hp2 others(5): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0084 a0001c0001t0002g0167 a0001c0001t0003g0148 others(5): Show |
8 | 214 | 0.0374 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13019884 | CTTCTTTC others(1): Show |
C | intron_variant | MODIFIER | HG00738.hp1 HG02071.hp2 HG02155.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(4): Show | a0001c0001t0001g0192 a0001c0001t0001g0197 a0001c0001t0002g0153 others(5): Show |
8 | 214 | 0.0374 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13019956 | TTTCCCTC others(1): Show |
T | intron_variant | MODIFIER | HG01993.hp2 HG02523.hp2 HG02818.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0006a0001c0001t0009others(3): Show | a0001c0001t0001g0120 a0001c0001t0006g0079 a0001c0001t0009g0064 others(3): Show |
6 | 214 | 0.0280 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13019960 | CCTCCTTC others(1): Show |
C | intron_variant | MODIFIER | HG00639.hp1 HG02630.hp1 NA18952.hp1 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0017a0001c0001t0033a0001c0003t0036 | a0001c0001t0017g0194 a0001c0001t0033g0156 a0001c0003t0036g0127 |
3 | 214 | 0.0140 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | chr16 | TogoVar | |||||||
SHISA9_chr16_12896598_13245416 | 13037101 | CACACACA others(1): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00609.hp2 HG00738.hp2 others(31): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(27): Show | a0001c0001t0001g0058 a0001c0001t0001g0176 a0001c0001t0003g0029 others(31): Show |
34 | 214 | 0.1589 | -8 | c.691 others(29): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar |