view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPAG16_chr2_213279464_214415501 | 213643348 | TTATATAT others(1): Show |
T | intron_variant | MODIFIER | HG00673.hp1 HG02895.hp2 HG03471.hp2 others(4): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0002c0002t0001a0002c0002t0002others(1): Show | a0001c0001t0001g0025 a0001c0001t0001g0030 a0001c0001t0001g0033 others(4): Show |
7 | 86 | 0.0814 | -8 | c.107 others(31): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213654540 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG02293.hp1 HG02559.hp1 HG02717.hp2 others(9): Show |
a0001a0002a0005others(1): Show | a0001c0001a0002c0002a0005c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0002g0001 others(9): Show |
12 | 86 | 0.1395 | -8 | c.107 others(31): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213667933 | CTATTTAT others(1): Show |
C | intron_variant | MODIFIER | HG02109.hp1 HG02976.hp1 NA19043.hp2 others(1): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(1): Show | a0001c0001t0001g0002 a0001c0001t0002g0001 a0002c0002t0001g0018 others(1): Show |
4 | 86 | 0.0465 | -8 | c.107 others(31): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213796928 | TCCTAAAG others(1): Show |
T | intron_variant | MODIFIER | HG00673.hp2 HG00735.hp2 HG01256.hp2 others(35): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(5): Show | a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 others(35): Show |
38 | 86 | 0.4419 | -8 | c.107 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213800327 | CCTCCCTC others(1): Show |
C | intron_variant | MODIFIER | HG00735.hp2 HG01256.hp2 HG01361.hp2 others(5): Show |
a0001a0005a0007 | a0001c0001a0005c0005a0007c0007 | a0001c0001t0001a0005c0005t0001a0007c0007t0001 | a0001c0001t0001g0015 a0001c0001t0001g0027 a0001c0001t0001g0030 others(5): Show |
8 | 86 | 0.0930 | -8 | c.107 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213802395 | CTCTATCT others(1): Show |
C | intron_variant | MODIFIER | HG02293.hp1 HG03195.hp2 HG03579.hp2 |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0002 | a0002c0002t0001g0003 a0002c0002t0001g0011 a0002c0002t0002g0073 |
3 | 86 | 0.0349 | -8 | c.107 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213804682 | CAACTAAC others(1): Show |
C | intron_variant | MODIFIER | HG00735.hp2 HG01256.hp2 HG01361.hp2 others(6): Show |
a0001a0008 | a0001c0001a0008c0010 | a0001c0001t0001a0001c0001t0002a0008c0010t0001 | a0001c0001t0001g0014 a0001c0001t0001g0027 a0001c0001t0001g0030 others(6): Show |
9 | 86 | 0.1047 | -8 | c.107 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213860357 | ATATATAT others(1): Show |
A | intron_variant | MODIFIER | HG00673.hp2 HG01361.hp1 HG01496.hp1 others(18): Show |
a0001a0003a0005others(2): Show | a0001c0001a0003c0003a0005c0005others(2): Show | a0001c0001t0002a0003c0003t0001a0003c0003t0002others(4): Show | a0001c0001t0002g0067 a0003c0003t0001g0026 a0003c0003t0001g0028 others(18): Show |
21 | 86 | 0.2442 | -8 | c.107 others(27): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213928904 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG01496.hp2 HG02976.hp2 |
a0002a0010 | a0002c0002a0010c0011 | a0002c0002t0001a0010c0011t0001 | a0002c0002t0001g0053 a0010c0011t0001g0086 |
2 | 86 | 0.0233 | -8 | c.121 others(27): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 11/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213932147 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG02976.hp1 HG03195.hp2 HG06807.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0001 | a0001c0001t0001g0002 a0001c0001t0001g0025 a0001c0001t0002g0001 others(3): Show |
6 | 86 | 0.0698 | -8 | c.140 others(27): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213991859 | GTTTATTT others(1): Show |
G | intron_variant | MODIFIER | HG01891.hp2 HG02615.hp2 HG02717.hp2 others(5): Show |
a0001a0002a0008 | a0001c0001a0002c0002a0008c0010 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0014 others(5): Show |
8 | 86 | 0.0930 | -8 | c.140 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214012259 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02559.hp1 HG02559.hp2 others(9): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0002a0002c0002t0001a0003c0003t0001others(2): Show | a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0008 others(9): Show |
12 | 86 | 0.1395 | -8 | c.140 others(27): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214056280 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG02559.hp1 HG03225.hp2 HG03453.hp2 others(2): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0003c0003t0001 | a0001c0001t0001g0071 a0001c0001t0002g0006 a0001c0001t0002g0007 others(2): Show |
5 | 86 | 0.0581 | -8 | c.152 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 13/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214177971 | GTATATAT others(1): Show |
G | intron_variant | MODIFIER | HG01256.hp1 HG02109.hp2 HG02293.hp1 others(4): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0048 a0001c0001t0001g0066 a0001c0001t0002g0044 others(4): Show |
7 | 86 | 0.0814 | -8 | c.172 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214227702 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG02922.hp1 HG02976.hp2 |
a0009a0010 | a0009c0008a0010c0011 | a0009c0008t0001a0010c0011t0001 | a0009c0008t0001g0084 a0010c0011t0001g0086 |
2 | 86 | 0.0233 | -8 | c.172 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214284797 | CTGTGTGT others(1): Show |
C | intron_variant | MODIFIER | HG02109.hp1 HG03130.hp1 HG03225.hp1 |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0002a0002c0002t0001a0003c0003t0003 | a0001c0001t0002g0072 a0002c0002t0001g0075 a0003c0003t0003g0019 |
3 | 86 | 0.0349 | -8 | c.172 others(31): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214298127 | CACACACA others(1): Show |
C | intron_variant | MODIFIER | HG02559.hp2 HG03130.hp2 NA19030.hp2 others(2): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0004c0004t0001 | a0001c0001t0001g0078 a0001c0001t0001g0079 a0004c0004t0001g0021 others(2): Show |
5 | 86 | 0.0581 | -8 | c.172 others(31): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214315501 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00735.hp1 HG01496.hp1 HG01516.hp1 others(25): Show |
a0001a0002a0003others(4): Show | a0001c0001a0002c0002a0003c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(5): Show | a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0013 others(25): Show |
28 | 86 | 0.3256 | -8 | c.172 others(29): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG17_chr1_117948590_118190228 | 117960140 | GTGTGTGT others(1): Show |
G | intron_variant | MODIFIER | HG01175.hp1 HG02280.hp1 NA18522.hp1 |
a0001a0003a0016 | a0001c0004a0003c0003a0016c0035 | a0001c0004t0003a0003c0003t0003a0016c0035t0003 | a0001c0004t0003g0082 a0003c0003t0003g0100 a0016c0035t0003g0207 |
3 | 266 | 0.0113 | -8 | c.667 others(27): Show |
SPAG17 | ENSG00000155761.14 | transcript | ENST00000336338.10 | protein_coding | 48/48 | chr1 | TogoVar | |||||||
SPAG17_chr1_117948590_118190228 | 118135371 | ATGTGTGT others(1): Show |
A | intron_variant | MODIFIER | HG02055.hp2 HG02976.hp1 NA19079.hp2 others(2): Show |
a0001a0004 | a0001c0004a0004c0005 | a0001c0004t0001a0004c0005t0001 | a0001c0004t0001g0226 a0001c0004t0001g0227 a0001c0004t0001g0231 others(2): Show |
5 | 266 | 0.0188 | -8 | c.315 others(27): Show |
SPAG17 | ENSG00000155761.14 | transcript | ENST00000336338.10 | protein_coding | 3/48 | chr1 | TogoVar | |||||||
SPAG1_chr8_100153587_100246904 | 100170800 | CATTTATT others(1): Show |
C | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00738.hp1 others(45): Show |
a0001a0002a0003others(5): Show | a0001c0003a0001c0008a0001c0009others(8): Show | a0001c0003t0001a0001c0003t0005a0001c0008t0002others(9): Show | a0001c0003t0001g0258 a0001c0003t0001g0266 a0001c0003t0005g0296 others(44): Show |
48 | 366 | 0.1312 | -8 | c.300 others(25): Show |
SPAG1 | ENSG00000104450.13 | transcript | ENST00000388798.7 | protein_coding | 3/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SPAG1_chr8_100153587_100246904 | 100206017 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp2 others(53): Show |
a0003a0008a0013others(1): Show | a0003c0004a0003c0006a0003c0019others(3): Show | a0003c0004t0001a0003c0004t0005a0003c0006t0001others(4): Show | a0003c0004t0001g0022 a0003c0004t0001g0023 a0003c0004t0001g0024 others(53): Show |
56 | 366 | 0.1530 | -8 | c.109 others(27): Show |
SPAG1 | ENSG00000104450.13 | transcript | ENST00000388798.7 | protein_coding | 10/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SPAG1_chr8_100153587_100246904 | 100214988 | CATATATA others(1): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00597.hp1 HG00639.hp2 others(18): Show |
a0001a0002a0006 | a0001c0002a0001c0009a0002c0001others(2): Show | a0001c0002t0001a0001c0009t0001a0002c0001t0001others(3): Show | a0001c0002t0001g0083 a0001c0002t0001g0126 a0001c0002t0001g0129 others(18): Show |
21 | 366 | 0.0574 | -8 | c.153 others(27): Show |
SPAG1 | ENSG00000104450.13 | transcript | ENST00000388798.7 | protein_coding | 12/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SPAG1_chr8_100153587_100246904 | 100220193 | TCAGTACT others(1): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp2 others(28): Show |
a0001a0003a0007 | a0001c0003a0001c0012a0003c0004others(1): Show | a0001c0003t0001a0001c0012t0001a0003c0004t0001others(1): Show | a0001c0003t0001g0107 a0001c0003t0001g0255 a0001c0003t0001g0258 others(28): Show |
31 | 366 | 0.0847 | -8 | c.153 others(23): Show |
SPAG1 | ENSG00000104450.13 | transcript | ENST00000388798.7 | protein_coding | 12/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SPAG4_chr20_35610829_35626094 | 35615424 | AAAAGAAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp2 HG01074.hp1 HG01346.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0010 others(2): Show |
12 | 320 | 0.0375 | -8 | c.-57 others(17): Show |
SPAG4 | ENSG00000061656.11 | transcript | ENST00000374273.8 | protein_coding | 404 | chr20 | TogoVar | |||||||
SPAG6_chr10_22340496_22422610 | 22346482 | TTCTTCTT others(1): Show |
T | intron_variant | MODIFIER | HG01243.hp2 HG03225.hp1 |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0131 a0002c0002t0003g0132 |
2 | 142 | 0.0141 | -8 | c.121 others(23): Show |
SPAG6 | ENSG00000077327.16 | transcript | ENST00000376624.8 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SPAG9_chr17_50957174_51125868 | 50971309 | AAAACAAA others(1): Show |
A | intron_variant | MODIFIER | HG01069.hp1 HG01071.hp1 HG01081.hp1 others(19): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0002t0001a0001c0002t0004others(2): Show | a0001c0001t0004g0189 a0001c0002t0001g0266 a0001c0002t0001g0267 others(19): Show |
22 | 292 | 0.0753 | -8 | c.370 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 28/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 50981483 | AAGATAGA others(1): Show |
A | intron_variant | MODIFIER | HG00621.hp1 HG01069.hp1 HG01071.hp1 others(36): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0202 a0001c0001t0001g0205 a0001c0001t0001g0206 others(36): Show |
39 | 292 | 0.1336 | -8 | c.323 others(27): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 25/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 50997139 | AAAACAAA others(1): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00558.hp1 others(63): Show |
a0001 | a0001c0001a0001c0005a0001c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0204 others(63): Show |
66 | 292 | 0.2260 | -8 | c.183 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 15/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51000751 | GAATGAAT others(1): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp1 HG00609.hp2 others(93): Show |
a0001a0002a0006others(1): Show | a0001c0001a0001c0002a0001c0008others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0027 a0001c0001t0001g0056 a0001c0001t0001g0057 others(93): Show |
96 | 292 | 0.3288 | -8 | c.160 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 13/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51000755 | GAATAAAT others(1): Show |
G | intron_variant | MODIFIER | HG01106.hp2 HG02109.hp1 HG03017.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0111 a0001c0001t0002g0134 a0001c0001t0002g0135 |
3 | 292 | 0.0103 | -8 | c.160 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 13/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51017519 | TGAGAGAG others(1): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00558.hp1 others(62): Show |
a0001 | a0001c0001a0001c0005a0001c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0204 others(62): Show |
65 | 292 | 0.2226 | -8 | c.109 others(27): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 8/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51025316 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00558.hp1 others(54): Show |
a0001 | a0001c0001a0001c0005a0001c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0205 others(54): Show |
57 | 292 | 0.1952 | -8 | c.784 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 6/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51053855 | GTATATAT others(1): Show |
G | intron_variant | MODIFIER | HG01934.hp2 HG02135.hp1 NA19088.hp2 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0008 | a0001c0001t0003g0042 a0001c0001t0003g0126 a0001c0001t0008g0117 |
3 | 292 | 0.0103 | -8 | c.495 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 3/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51077085 | GCTAGCTA others(1): Show |
G | intron_variant | MODIFIER | NA18994.hp1 NA19011.hp1 NA19088.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0042 a0001c0001t0003g0046 a0001c0001t0003g0048 |
3 | 292 | 0.0103 | -8 | c.424 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 2/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51083543 | TTTTATTT others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00639.hp1 others(26): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0013 | a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 others(26): Show |
29 | 292 | 0.0993 | -8 | c.304 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 1/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51089657 | TATATATA others(1): Show |
T | intron_variant | MODIFIER | HG02647.hp1 HG02717.hp2 HG02818.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 others(1): Show |
4 | 292 | 0.0137 | -8 | c.304 others(25): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 1/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51095823 | GAGAGATA others(1): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00558.hp1 others(64): Show |
a0001a0002 | a0001c0001a0001c0005a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0204 others(64): Show |
67 | 292 | 0.2295 | -8 | c.304 others(27): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 1/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51101345 | CAAAAAAA others(1): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00558.hp1 others(58): Show |
a0001 | a0001c0001a0001c0005a0001c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0204 others(58): Show |
61 | 292 | 0.2089 | -8 | c.303 others(27): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 1/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51106102 | TACACACA others(1): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00738.hp1 others(16): Show |
a0001a0002 | a0001c0001a0002c0003a0002c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(6): Show | a0001c0001t0001g0090 a0001c0001t0001g0124 a0001c0001t0002g0011 others(16): Show |
19 | 292 | 0.0651 | -8 | c.303 others(27): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 1/29 | chr17 | TogoVar | |||||||
SPAG9_chr17_50957174_51125868 | 51125276 | AAAAGAAA others(1): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00558.hp1 others(70): Show |
a0001a0003 | a0001c0001a0001c0005a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0156 a0001c0001t0001g0169 a0001c0001t0001g0200 others(70): Show |
73 | 292 | 0.2500 | -8 | c.-46 others(19): Show |
SPAG9 | ENSG00000008294.22 | transcript | ENST00000262013.12 | protein_coding | 4409 | chr17 | TogoVar | |||||||
SPAM1_chr7_123920241_123965046 | 123947578 | CCACACAC others(1): Show |
C | intron_variant | MODIFIER | HG02109.hp1 HG02145.hp2 HG02258.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0037 a0001c0001t0001g0052 a0001c0001t0001g0177 others(4): Show |
8 | 388 | 0.0206 | -8 | c.-31 others(27): Show |
SPAM1 | ENSG00000106304.16 | transcript | ENST00000682466.1 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SPANXA1_chrX_141578674_141589738 | 141579042 | CTCCCTCC others(1): Show |
C | downstream_gene_variant | MODIFIER | HG00423.hp2 HG00558.hp2 HG01106.hp1 others(4): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0002a0003c0003t0002 | a0001c0001t0002g0005 a0001c0001t0002g0025 a0003c0003t0002g0024 |
7 | 157 | 0.0446 | -8 | c.*46 others(19): Show |
SPANXA1 | ENSG00000198021.8 | transcript | ENST00000370519.4 | protein_coding | 4631 | chrX | TogoVar | |||||||
SPANXA2_chrX_141584708_141595762 | 141594643 | AATTTTCT others(1): Show |
A | downstream_gene_variant | MODIFIER | NA19064.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 185 | 0.0054 | -8 | c.*39 others(19): Show |
SPANXA2 | ENSG00000203926.5 | transcript | ENST00000370518.4 | protein_coding | 3882 | chrX | TogoVar | |||||||
SPANXA2_chrX_141584708_141595762 | 141595376 | AAGGAAGG others(1): Show |
A | downstream_gene_variant | MODIFIER | HG00558.hp2 HG01106.hp1 HG01168.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0001 a0001c0001t0001g0007 a0002c0002t0001g0001 |
9 | 185 | 0.0487 | -8 | c.*46 others(19): Show |
SPANXA2 | ENSG00000203926.5 | transcript | ENST00000370518.4 | protein_coding | 4615 | chrX | TogoVar | |||||||
SPANXB1_chrX_140997594_141008706 | 141008319 | GAGGGAGG others(1): Show |
G | downstream_gene_variant | MODIFIER | HG01496.hp1 HG02055.hp1 HG02615.hp1 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0002 a0002c0002t0001g0002 |
4 | 301 | 0.0133 | -8 | c.*46 others(19): Show |
SPANXB1 | ENSG00000227234.2 | transcript | ENST00000449283.2 | protein_coding | 4614 | chrX | TogoVar | |||||||
SPANXD_chrX_141692411_141703739 | 141701638 | CTTTTCTC others(1): Show |
C | upstream_gene_variant | MODIFIER | NA18939.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 334 | 0.0030 | -8 | c.-32 others(19): Show |
SPANXD | ENSG00000196406.4 | transcript | ENST00000370515.3 | protein_coding | 2900 | chrX | TogoVar | |||||||
SPANXN2_chrX_143706955_143725752 | 143709468 | AACACACA others(1): Show |
A | downstream_gene_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00597.hp2 others(41): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0001a0001c0003t0001 | a0001c0001t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0045 others(12): Show |
44 | 336 | 0.1310 | -8 | c.*25 others(19): Show |
SPANXN2 | ENSG00000268988.2 | transcript | ENST00000598475.2 | protein_coding | 2486 | chrX | TogoVar | |||||||
SPANXN2_chrX_143706955_143725752 | 143710067 | GGTGTGTG others(1): Show |
G | downstream_gene_variant | MODIFIER | HG00099.hp1 HG01243.hp1 HG02109.hp2 others(5): Show |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0001a0002c0005t0001 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0019 others(3): Show |
8 | 336 | 0.0238 | -8 | c.*19 others(19): Show |
SPANXN2 | ENSG00000268988.2 | transcript | ENST00000598475.2 | protein_coding | 1887 | chrX | TogoVar | |||||||
SPANXN2_chrX_143706955_143725752 | 143713892 | ACTCTCTC others(1): Show |
A | intron_variant | MODIFIER | HG00597.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0071 | 1 | 336 | 0.0030 | -8 | c.79- others(23): Show |
SPANXN2 | ENSG00000268988.2 | transcript | ENST00000598475.2 | protein_coding | 1/1 | chrX | TogoVar |