Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLC9C1_chr3_112135898_112299216	112183349	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0001 a0008c0009t0001	a0008c0009t0001g0008 a0008c0009t0001g0008	1	3	0.3333	13	c.252 others(32): Show c.2524-1104_2524-1092dupAAAAAAAAAAAAA	SLC9C1	ENSG00000172139.15	transcript	ENST00000305815.10	protein_coding	20/28			chr3	TogoVar
SLC9C1_chr3_112135898_112299216	112295697	T T	TATATATA others(6): Show TATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0014 a0014	a0014c0023 a0014c0023	a0014c0023t0001 a0014c0023t0001	a0014c0023t0001g0243 a0014c0023t0001g0243	1	361	0.0028	13	c.-16 others(24): Show c.-1693_-1692insTATATATATATAT	SLC9C1	ENSG00000172139.15	transcript	ENST00000305815.10	protein_coding		1482		chr3	TogoVar
SLC9C2_chr1_173495460_173608072	173550872	A A	AGAGAGAG others(6): Show AGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0115 a0001c0006t0001g0115	1	78	0.0128	13	c.129 others(32): Show c.1298-2321_1298-2320insCTCTCTCTCTCTC	SLC9C2	ENSG00000162753.13	transcript	ENST00000367714.4	protein_coding	11/27			chr1	TogoVar
SLC9C2_chr1_173495460_173608072	173599362	A A	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0002 a0002	a0002c0008 a0002c0008	a0002c0008t0002 a0002c0008t0002	a0002c0008t0002g0017 a0002c0008t0002g0017	1	28	0.0357	13	c.228 others(28): Show c.228+742_228+754dupAAAAAAAAAAAAA	SLC9C2	ENSG00000162753.13	transcript	ENST00000367714.4	protein_coding	3/27			chr1	TogoVar
SLCO1B1_chr12_21126194_21244796	21152533	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00609.hp1 HG01168.hp1 others(28): Show HG00280.hp1 HG00609.hp1 HG01168.hp1 HG01358.hp1 HG01975.hp1 HG02135.hp1 HG02145.hp1 HG02155.hp2 HG02257.hp2 HG02698.hp2 HG03540.hp2 HG03654.hp1 HG04184.hp1 NA18747.hp1 NA18942.hp1 NA18954.hp2 NA18960.hp2 NA18965.hp2 NA18979.hp1 NA18982.hp2 NA18988.hp1 NA18989.hp2 NA18992.hp2 NA19012.hp1 NA19054.hp1 NA19057.hp2 NA19074.hp2 NA19081.hp1 NA19083.hp2 NA19088.hp1 NA19091.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0010 a0017	a0001c0001 a0001c0003 a0002c0002 others(5): Show a0001c0001 a0001c0003 a0002c0002 a0002c0005 a0003c0004 a0004c0006 a0010c0013 a0017c0026	a0001c0001t0003 a0001c0001t0004 a0001c0003t0002 others(7): Show a0001c0001t0003 a0001c0001t0004 a0001c0003t0002 a0002c0002t0001 a0002c0005t0001 a0003c0004t0002 a0003c0004t0003 a0004c0006t0001 a0010c0013t0002 a0017c0026t0003	a0001c0001t0003g0035 a0001c0001t0003g0036 a0001c0001t0003g0126 others(23): Show a0001c0001t0003g0035 a0001c0001t0003g0036 a0001c0001t0003g0126 a0001c0001t0004g0026 a0001c0001t0004g0027 a0001c0001t0004g0034 a0001c0003t0002g0264 a0002c0002t0001g0029 a0002c0005t0001g0248 a0002c0005t0001g0263 a0003c0004t0002g0001 a0003c0004t0002g0002 a0003c0004t0002g0025 a0003c0004t0002g0031 a0003c0004t0002g0037 a0003c0004t0002g0040 a0003c0004t0002g0041 a0003c0004t0002g0042 a0003c0004t0003g0045 a0003c0004t0003g0046 a0004c0006t0001g0032 a0004c0006t0001g0033 a0004c0006t0001g0265 a0010c0013t0002g0039 a0010c0013t0002g0043 a0017c0026t0003g0044	31	82	0.3780	13	c.84+ others(30): Show c.84+10881_84+10893dupTTTTTTTTTTTTT	SLCO1B1	ENSG00000134538.3	transcript	ENST00000256958.3	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1B1_chr12_21126194_21244796	21199876	A A	ACTGCAAC others(6): Show ACTGCAACCTTCGC	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0023 a0001c0023	a0001c0023t0001 a0001c0023t0001	a0001c0023t0001g0083 a0001c0023t0001g0083	1	316	0.0032	13	c.971 others(28): Show c.971-629_971-617dupGCAACCTTCGCCT	SLCO1B1	ENSG00000134538.3	transcript	ENST00000256958.3	protein_coding	8/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1B1_chr12_21126194_21244796	21222395	A A	ATATATAT others(6): Show ATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18986.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0066 a0001c0001t0003g0066	1	269	0.0037	13	c.174 others(28): Show c.1747+31_1747+32insTATATATATATAT	SLCO1B1	ENSG00000134538.3	transcript	ENST00000256958.3	protein_coding	13/14			chr12	TogoVar
SLCO1B1_chr12_21126194_21244796	21222397	A A	AAAAAAAT others(6): Show AAAAAAATATATAT	intron_variant intron_variant	MODIFIER	NA19077.hp2 NA19077.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0038 a0003c0004t0002g0038	1	189	0.0053	13	c.174 others(28): Show c.1747+34_1747+35insAAAAATATATATA	SLCO1B1	ENSG00000134538.3	transcript	ENST00000256958.3	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1B1_chr12_21126194_21244796	21222397	A A	AAAAATAT others(6): Show AAAAATATATATAT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01358.hp1 HG00609.hp1 HG01358.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0031 a0003c0004t0002g0040 a0003c0004t0002g0031 a0003c0004t0002g0040	2	190	0.0105	13	c.174 others(28): Show c.1747+34_1747+35insAAATATATATATA	SLCO1B1	ENSG00000134538.3	transcript	ENST00000256958.3	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO1B1_chr12_21126194_21244796	21222397	A A	AAATATAT others(6): Show AAATATATATATAT	intron_variant intron_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0001 a0003c0004t0002g0001	1	189	0.0053	13	c.174 others(28): Show c.1747+34_1747+35insATATATATATATA	SLCO1B1	ENSG00000134538.3	transcript	ENST00000256958.3	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO2B1_chr11_75146107_75211549	75194785	A A	ATTTTTTT others(6): Show ATTTTTTTAAATAG	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0120 a0002c0003t0003g0120	1	370	0.0027	13	c.143 others(32): Show c.1433+1210_1433+1211insTTTTTTTAAATAG	SLCO2B1	ENSG00000137491.15	transcript	ENST00000289575.10	protein_coding	9/13			chr11	TogoVar
SLCO3A1_chr15_91848708_92170903	91971394	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02896.hp1 HG02976.hp2 others(2): Show HG01891.hp2 HG02896.hp1 HG02976.hp2 NA19043.hp1 NA19064.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0012 a0001c0001 a0005c0012	a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 others(2): Show a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 a0001c0001t0023 a0005c0012t0004	a0001c0001t0007g0183 a0001c0001t0010g0064 a0001c0001t0012g0043 others(2): Show a0001c0001t0007g0183 a0001c0001t0010g0064 a0001c0001t0012g0043 a0001c0001t0023g0058 a0005c0012t0004g0153	5	45	0.1111	13	c.646 others(32): Show c.646+54940_646+54952dupAAAAAAAAAAAAA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047277	T T	TATATAAA others(6): Show TATATAAATATATA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0054 a0001c0001t0054	a0001c0001t0054g0168 a0001c0001t0054g0168	1	183	0.0055	13	c.647 others(32): Show c.647-47599_647-47598insAATATATAATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047287	T T	TATATAAT others(6): Show TATATAATATATAA	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0131 a0001c0001t0008g0131	1	184	0.0054	13	c.647 others(32): Show c.647-47589_647-47588insATATATAAATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047308	T T	TATATAAA others(6): Show TATATAAATATATA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG01099.hp2 others(2): Show HG00099.hp1 HG00099.hp2 HG01099.hp2 HG01169.hp1 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0054	a0001c0001t0001g0108 a0001c0001t0001g0122 a0001c0001t0003g0062 others(2): Show a0001c0001t0001g0108 a0001c0001t0001g0122 a0001c0001t0003g0062 a0001c0001t0006g0158 a0001c0001t0054g0168	5	185	0.0270	13	c.647 others(32): Show c.647-47568_647-47567insAATATATAATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047339	T T	TATATAAA others(6): Show TATATAAATATATA	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01069.hp1 HG01257.hp1 HG00741.hp2 HG01069.hp1 HG01257.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0008 a0001c0002 a0003c0008	a0001c0002t0001 a0001c0002t0020 a0003c0008t0001 a0001c0002t0001 a0001c0002t0020 a0003c0008t0001	a0001c0002t0001g0070 a0001c0002t0020g0142 a0003c0008t0001g0126 a0001c0002t0001g0070 a0001c0002t0020g0142 a0003c0008t0001g0126	3	156	0.0192	13	c.647 others(32): Show c.647-47537_647-47536insAATATATAATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047358	A A	AAATAATA others(6): Show AAATAATAAAATAT	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0111 a0001c0001t0002g0111	1	178	0.0056	13	c.647 others(32): Show c.647-47522_647-47521insATAATAAAATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047370	T T	TATATAAA others(6): Show TATATAAATATATA	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00673.hp2 HG00733.hp1 others(9): Show HG00558.hp1 HG00673.hp2 HG00733.hp1 HG01069.hp1 HG01256.hp2 HG01952.hp2 HG02300.hp2 HG03017.hp2 HG04199.hp2 HG06807.hp1 NA18965.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 a0001c0001 a0001c0002 a0001c0006	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(7): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0048 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0030 a0001c0006t0004	a0001c0001t0002g0083 a0001c0001t0003g0144 a0001c0001t0005g0048 others(9): Show a0001c0001t0002g0083 a0001c0001t0003g0144 a0001c0001t0005g0048 a0001c0001t0005g0119 a0001c0001t0007g0005 a0001c0001t0048g0004 a0001c0002t0001g0070 a0001c0002t0001g0116 a0001c0002t0002g0049 a0001c0002t0005g0044 a0001c0002t0030g0078 a0001c0006t0004g0041	12	177	0.0678	13	c.647 others(32): Show c.647-47506_647-47505insAATATATAATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047401	T T	TATATAAA others(6): Show TATATAAATATATA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01255.hp1 HG01346.hp2 others(5): Show HG01081.hp1 HG01255.hp1 HG01346.hp2 HG01361.hp1 HG01496.hp2 NA18612.hp1 NA18941.hp2 NA18970.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0025 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0025 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005	a0001c0001t0001g0055 a0001c0001t0025g0125 a0001c0002t0001g0089 others(5): Show a0001c0001t0001g0055 a0001c0001t0025g0125 a0001c0002t0001g0089 a0001c0002t0001g0091 a0001c0002t0001g0092 a0001c0002t0001g0117 a0001c0002t0002g0147 a0001c0002t0005g0097	8	173	0.0462	13	c.647 others(32): Show c.647-47475_647-47474insAATATATAATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92047411	T T	TATATAAT others(6): Show TATATAATATATAA	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01069.hp2 HG01071.hp1 others(22): Show HG00323.hp2 HG01069.hp2 HG01071.hp1 HG01099.hp1 HG01109.hp2 HG01168.hp2 HG02055.hp1 HG02132.hp1 HG02155.hp2 HG02257.hp1 HG02273.hp1 HG02486.hp1 HG02683.hp2 HG02922.hp2 HG02970.hp2 HG03471.hp1 HG03471.hp2 HG04199.hp1 NA18965.hp2 NA18980.hp1 NA18986.hp1 NA19064.hp2 NA19065.hp1 NA20129.hp1 NA20905.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0007 a0001c0010 a0002c0003 a0005c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0016 a0001c0001t0027 a0001c0001t0033 a0001c0002t0001 a0001c0004t0004 a0001c0007t0002 a0001c0010t0012 a0002c0003t0001 a0002c0003t0009 a0005c0012t0004	a0001c0001t0001g0080 a0001c0001t0001g0143 a0001c0001t0002g0074 others(22): Show a0001c0001t0001g0080 a0001c0001t0001g0143 a0001c0001t0002g0074 a0001c0001t0002g0082 a0001c0001t0002g0088 a0001c0001t0002g0138 a0001c0001t0003g0009 a0001c0001t0003g0010 a0001c0001t0003g0053 a0001c0001t0003g0065 a0001c0001t0003g0102 a0001c0001t0005g0060 a0001c0001t0006g0157 a0001c0001t0008g0067 a0001c0001t0010g0021 a0001c0001t0016g0118 a0001c0001t0027g0040 a0001c0001t0033g0027 a0001c0002t0001g0188 a0001c0004t0004g0120 a0001c0007t0002g0148 a0001c0010t0012g0069 a0002c0003t0001g0008 a0002c0003t0009g0155 a0005c0012t0004g0153	25	171	0.1462	13	c.647 others(32): Show c.647-47465_647-47464insATATATAAATATA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO4A1_chr20_62637503_62677293	62666105	G G	GCCCCGCC others(6): Show GCCCCGCCCCGCCC	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0227 a0003c0004t0001g0227	1	396	0.0025	13	c.127 others(30): Show c.1277-266_1277-265insGCCCCCCCGCCCC	SLCO4A1	ENSG00000101187.16	transcript	ENST00000217159.6	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr20	TogoVar
SLCO4A1_chr20_62637503_62677293	62666111	C C	CCCCGCCC others(6): Show CCCCGCCCCCCCCG	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0226 a0003c0004t0001g0226	1	421	0.0024	13	c.127 others(30): Show c.1277-266_1277-265insGCCCCCCCCGCCC	SLCO4A1	ENSG00000101187.16	transcript	ENST00000217159.6	protein_coding	6/11		INFO_REALIGN_3_PRIME	chr20	TogoVar
SLCO5A1_chr8_69662046_69839978	69686231	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02615.hp2 HG02647.hp1 others(4): Show HG02145.hp2 HG02615.hp2 HG02647.hp1 HG02717.hp2 HG03130.hp2 HG03516.hp2 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0039 a0002c0002t0015 a0002c0002t0038 others(4): Show a0001c0001t0039 a0002c0002t0015 a0002c0002t0038 a0002c0002t0066 a0002c0002t0071 a0002c0002t0081 a0002c0002t0092	a0001c0001t0039g0157 a0002c0002t0015g0090 a0002c0002t0038g0116 others(4): Show a0001c0001t0039g0157 a0002c0002t0015g0090 a0002c0002t0038g0116 a0002c0002t0066g0126 a0002c0002t0071g0019 a0002c0002t0081g0016 a0002c0002t0092g0081	7	141	0.0496	13	c.162 others(32): Show c.1623-3889_1623-3888insTTTTTTTTTTTTT	SLCO5A1	ENSG00000137571.11	transcript	ENST00000260126.9	protein_coding	6/9			chr8	TogoVar
SLCO5A1_chr8_69662046_69839978	69784811	A A	AGAAAGAA others(6): Show AGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02886.hp1 HG01255.hp1 HG02886.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0008 a0002c0002t0079 a0001c0001t0008 a0002c0002t0079	a0001c0001t0008g0158 a0002c0002t0079g0022 a0001c0001t0008g0158 a0002c0002t0079g0022	2	39	0.0513	13	c.908 others(32): Show c.908-22937_908-22936insCTTTCTTTCTTTC	SLCO5A1	ENSG00000137571.11	transcript	ENST00000260126.9	protein_coding	2/9			chr8	TogoVar
SLFN11_chr17_35345305_35378621	35349341	A A	AAAAAAAA others(6): Show AAAAAAAAAAAATG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 NA18944.hp1 NA18959.hp2 others(4): Show HG02145.hp2 NA18944.hp1 NA18959.hp2 NA18982.hp2 NA19002.hp2 NA19006.hp2 NA19082.hp2	a0001 a0005 a0023 a0001 a0005 a0023	a0001c0002 a0005c0008 a0023c0045 a0001c0002 a0005c0008 a0023c0045	a0001c0002t0001 a0005c0008t0004 a0023c0045t0001 a0001c0002t0001 a0005c0008t0004 a0023c0045t0001	a0001c0002t0001g0014 a0001c0002t0001g0168 a0005c0008t0004g0121 others(1): Show a0001c0002t0001g0014 a0001c0002t0001g0168 a0005c0008t0004g0121 a0023c0045t0001g0090	7	452	0.0155	13	c.30 others(24): Show c.3014_*3015insCATTTTTTTTTTT	SLFN11	ENSG00000172716.17	transcript	ENST00000685675.1	protein_coding		963		chr17	TogoVar
SLFN12_chr17_35405922_35437500	35425838	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0078 a0002c0002t0002g0078	1	177	0.0056	13	c.-40 others(30): Show c.-40-2783_-40-2771dupAAAAAAAAAAAAA	SLFN12	ENSG00000172123.13	transcript	ENST00000304905.10	protein_coding	1/3			chr17	TogoVar
SLFN12_chr17_35405922_35437500	35434465	G G	GAAGGAAG others(6): Show GAAGGAAGGAAGGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp1 NA18955.hp2 NA18992.hp2 HG01981.hp1 NA18955.hp2 NA18992.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0001 a0002c0002t0001g0016 a0002c0002t0001g0022 a0002c0002t0001g0001 a0002c0002t0001g0016 a0002c0002t0001g0022	3	101	0.0297	13	c.-23 others(24): Show c.-2319_-2318insTCCTTCCTTCCTT	SLFN12	ENSG00000172123.13	transcript	ENST00000304905.10	protein_coding		1966		chr17	TogoVar
SLFN13_chr17_35430096_35453766	35434465	G G	GAAGGAAG others(6): Show GAAGGAAGGAAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01981.hp1 NA18992.hp2 HG01981.hp1 NA18992.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0077 a0005c0005t0008 a0001c0001t0077 a0005c0005t0008	a0001c0001t0077g0155 a0005c0005t0008g0006 a0001c0001t0077g0155 a0005c0005t0008g0006	2	108	0.0185	13	c.61 others(24): Show c.6129_*6130insTCCTTCCTTCCTT	SLFN13	ENSG00000154760.14	transcript	ENST00000285013.11	protein_coding		630		chr17	TogoVar
SLFN14_chr17_35538985_35565819	35561749	A A	AAAAAAAA others(6): Show AAAAAAAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00408.hp2 NA18991.hp1 HG00323.hp1 HG00408.hp2 NA18991.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0004 a0002c0002t0003g0138 a0002c0002t0003g0004 a0002c0002t0003g0138	3	282	0.0106	13	c.-11 others(24): Show c.-1107_-1106insCTTTCTTTTTTTT	SLFN14	ENSG00000236320.4	transcript	ENST00000674182.1	protein_coding		931		chr17	TogoVar
SLIT1_chr10_96993038_97190959	97166569	G G	GAAGAAAG others(6): Show GAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0055 a0001c0006t0001g0055	1	95	0.0105	13	c.198 others(30): Show c.198-1680_198-1679insTTCTTTCTTTCTT	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT2_chr4_20246905_20625561	20511587	A A	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01074.hp1 HG02683.hp2 others(4): Show HG00639.hp2 HG01074.hp1 HG02683.hp2 HG02970.hp1 HG03130.hp2 HG03453.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 others(3): Show a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0001t0058 a0001c0002t0008 a0001c0005t0033	a0001c0001t0006g0082 a0001c0001t0006g0129 a0001c0001t0007g0165 others(4): Show a0001c0001t0006g0082 a0001c0001t0006g0129 a0001c0001t0007g0165 a0001c0001t0011g0014 a0001c0001t0058g0008 a0001c0002t0008g0191 a0001c0005t0033g0134	7	65	0.1077	13	c.105 others(30): Show c.1058+454_1058+466dupTTTTTTTTTTTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20518588	T T	TATATATA others(6): Show TATATATATATATA	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG02886.hp1 NA19009.hp1 others(1): Show HG01978.hp2 HG02886.hp1 NA19009.hp1 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0071 a0001c0002t0008 others(1): Show a0001c0001t0001 a0001c0001t0071 a0001c0002t0008 a0001c0002t0029	a0001c0001t0001g0107 a0001c0001t0071g0153 a0001c0002t0008g0212 others(1): Show a0001c0001t0001g0107 a0001c0001t0071g0153 a0001c0002t0008g0212 a0001c0002t0029g0156	4	178	0.0225	13	c.105 others(30): Show c.1059-794_1059-793insATATATATATATA	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36			chr4	TogoVar
SLIT3_chr5_168656740_169306139	168746708	T T	TGTGGTGG others(6): Show TGTGGTGGTGTGCG	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02055.hp2 HG02559.hp1 others(5): Show HG01109.hp2 HG02055.hp2 HG02559.hp1 HG02965.hp2 HG03209.hp1 HG03225.hp1 HG03486.hp2 HG03579.hp2	a0001 a0002 a0001 a0002	a0001c0013 a0001c0017 a0001c0020 others(3): Show a0001c0013 a0001c0017 a0001c0020 a0001c0048 a0001c0052 a0002c0005	a0001c0013t0001 a0001c0017t0001 a0001c0020t0001 others(3): Show a0001c0013t0001 a0001c0017t0001 a0001c0020t0001 a0001c0048t0004 a0001c0052t0005 a0002c0005t0003	a0001c0013t0001g0047 a0001c0013t0001g0091 a0001c0013t0001g0094 others(5): Show a0001c0013t0001g0047 a0001c0013t0001g0091 a0001c0013t0001g0094 a0001c0017t0001g0062 a0001c0020t0001g0073 a0001c0048t0004g0064 a0001c0052t0005g0088 a0002c0005t0003g0128	8	106	0.0755	13	c.227 others(32): Show c.2270+1593_2270+1594insCGCACACCACCAC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168746727	T T	TGTGTGGT others(6): Show TGTGTGGTGTGGGA	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02055.hp2 HG02559.hp1 others(5): Show HG01109.hp2 HG02055.hp2 HG02559.hp1 HG02965.hp2 HG03209.hp1 HG03225.hp1 HG03486.hp2 HG03579.hp2	a0001 a0002 a0001 a0002	a0001c0013 a0001c0017 a0001c0020 others(3): Show a0001c0013 a0001c0017 a0001c0020 a0001c0048 a0001c0052 a0002c0005	a0001c0013t0001 a0001c0017t0001 a0001c0020t0001 others(3): Show a0001c0013t0001 a0001c0017t0001 a0001c0020t0001 a0001c0048t0004 a0001c0052t0005 a0002c0005t0003	a0001c0013t0001g0047 a0001c0013t0001g0091 a0001c0013t0001g0094 others(5): Show a0001c0013t0001g0047 a0001c0013t0001g0091 a0001c0013t0001g0094 a0001c0017t0001g0062 a0001c0020t0001g0073 a0001c0048t0004g0064 a0001c0052t0005g0088 a0002c0005t0003g0128	8	132	0.0606	13	c.227 others(32): Show c.2270+1574_2270+1575insTCCCACACCACAC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168746761	T T	TGTGTGGT others(6): Show TGTGTGGTGTGGGA	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02895.hp2 HG02897.hp1 others(2): Show HG02145.hp2 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1	a0001 a0002 a0011 a0001 a0002 a0011	a0001c0004 a0001c0050 a0002c0053 others(1): Show a0001c0004 a0001c0050 a0002c0053 a0011c0031	a0001c0004t0013 a0001c0050t0020 a0002c0053t0003 others(1): Show a0001c0004t0013 a0001c0050t0020 a0002c0053t0003 a0011c0031t0006	a0001c0004t0013g0001 a0001c0004t0013g0002 a0001c0050t0020g0003 others(2): Show a0001c0004t0013g0001 a0001c0004t0013g0002 a0001c0050t0020g0003 a0002c0053t0003g0123 a0011c0031t0006g0084	5	124	0.0403	13	c.227 others(32): Show c.2270+1540_2270+1541insTCCCACACCACAC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168798220	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG04115.hp1 HG04115.hp2 HG01433.hp1 HG04115.hp1 HG04115.hp2	a0002 a0003 a0002 a0003	a0002c0008 a0002c0043 a0003c0056 a0002c0008 a0002c0043 a0003c0056	a0002c0008t0002 a0002c0043t0027 a0003c0056t0001 a0002c0008t0002 a0002c0043t0027 a0003c0056t0001	a0002c0008t0002g0023 a0002c0043t0027g0052 a0003c0056t0001g0078 a0002c0008t0002g0023 a0002c0043t0027g0052 a0003c0056t0001g0078	3	47	0.0638	13	c.936 others(30): Show c.936-2643_936-2642insAAAAAAAAAAAAA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	9/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169079520	G G	GGGAGGAG others(6): Show GGGAGGAGGAAGGA	intron_variant intron_variant	MODIFIER	NA19007.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0122 a0001c0001t0003g0122	1	121	0.0083	13	c.413 others(34): Show c.413+113946_413+113958dupTCCTTCCTCCTCC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169079718	A A	AGAAGAGG others(6): Show AGAAGAGGGAAGGG	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG02976.hp2 others(2): Show HG02895.hp2 HG02897.hp1 HG02976.hp2 HG03130.hp2 HG03579.hp2	a0001 a0001	a0001c0004 a0001c0015 a0001c0047 others(1): Show a0001c0004 a0001c0015 a0001c0047 a0001c0052	a0001c0004t0013 a0001c0015t0016 a0001c0047t0011 others(1): Show a0001c0004t0013 a0001c0015t0016 a0001c0047t0011 a0001c0052t0005	a0001c0004t0013g0001 a0001c0004t0013g0002 a0001c0015t0016g0089 others(2): Show a0001c0004t0013g0001 a0001c0004t0013g0002 a0001c0015t0016g0089 a0001c0047t0011g0012 a0001c0052t0005g0088	5	130	0.0385	13	c.413 others(34): Show c.413+113760_413+113761insCCCTTCCCTCTTC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169089019	C C	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02135.hp2 HG02622.hp2 others(5): Show HG00735.hp2 HG02135.hp2 HG02622.hp2 HG02717.hp2 HG02735.hp2 NA19007.hp1 NA19060.hp1 NA19060.hp2	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0001c0003 a0001c0006 others(4): Show a0001c0001 a0001c0003 a0001c0006 a0001c0014 a0002c0002 a0002c0044 a0009c0024	a0001c0001t0003 a0001c0003t0031 a0001c0006t0002 others(5): Show a0001c0001t0003 a0001c0003t0031 a0001c0006t0002 a0001c0014t0002 a0001c0014t0009 a0002c0002t0017 a0002c0044t0007 a0009c0024t0028	a0001c0001t0003g0122 a0001c0003t0031g0026 a0001c0006t0002g0039 others(5): Show a0001c0001t0003g0122 a0001c0003t0031g0026 a0001c0006t0002g0039 a0001c0014t0002g0028 a0001c0014t0009g0112 a0002c0002t0017g0119 a0002c0044t0007g0101 a0009c0024t0028g0076	8	16	0.5000	13	c.413 others(34): Show c.413+104447_413+104459dupTTTTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLITRK1_chr13_83872205_83887474	83872644	T T	TCATAATA others(6): Show TCATAATATTACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG00741.hp1 HG01168.hp2 others(38): Show HG00735.hp2 HG00741.hp1 HG01168.hp2 HG01169.hp2 HG01243.hp1 HG01257.hp2 HG01891.hp1 HG01891.hp2 HG01952.hp1 HG01981.hp2 HG02055.hp1 HG02257.hp2 HG02451.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02965.hp2 HG02976.hp1 HG03225.hp1 HG03516.hp2 HG03540.hp2 HG03688.hp1 HG03927.hp2 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18974.hp1 NA18979.hp2 NA18983.hp2 NA19011.hp1 NA19012.hp2 NA19030.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0006 others(1): Show a0001c0001 a0001c0004 a0001c0006 a0002c0002	a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 others(5): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0001t0030 a0001c0004t0005 a0001c0006t0020 a0002c0002t0008	a0001c0001t0003g0011 a0001c0001t0005g0006 a0001c0001t0005g0025 others(7): Show a0001c0001t0003g0011 a0001c0001t0005g0006 a0001c0001t0005g0025 a0001c0001t0005g0054 a0001c0001t0006g0010 a0001c0001t0012g0020 a0001c0001t0030g0042 a0001c0004t0005g0027 a0001c0006t0020g0031 a0002c0002t0008g0013	41	402	0.1020	13	c.67 others(24): Show c.6772_*6773insGTGTAATATTATG	SLITRK1	ENSG00000178235.8	transcript	ENST00000674365.1	protein_coding		4560		chr13	TogoVar
SLITRK3_chr3_165181720_165201384	165196906	T T	TCTCTCTC others(6): Show TCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG01167.hp1 HG01169.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0016 a0004c0005t0016	a0004c0005t0016g0050 a0004c0005t0016g0050	2	412	0.0049	13	c.-13 others(24): Show c.-1361_-1349dupGAGAGAGAGAGAG	SLITRK3	ENSG00000121871.4	transcript	ENST00000475390.2	protein_coding		523		chr3	TogoVar
SLITRK3_chr3_165181720_165201384	165196927	C C	CTCTCTCT others(6): Show CTCTCTCTCTCTCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01256.hp1 HG03225.hp2 NA18950.hp1 others(1): Show HG01256.hp1 HG03225.hp2 NA18950.hp1 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0002g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0002g0001	4	392	0.0102	13	c.-13 others(24): Show c.-1370_-1369insAGAGAGAGAGAGA	SLITRK3	ENSG00000121871.4	transcript	ENST00000475390.2	protein_coding		544		chr3	TogoVar
SLITRK4_chrX_143617790_143641101	143628091	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01975.hp2 HG01981.hp2 HG02004.hp1 others(2): Show HG01975.hp2 HG01981.hp2 HG02004.hp1 HG02148.hp2 HG02165.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0043 a0001c0001t0021 a0001c0001t0043	a0001c0001t0021g0062 a0001c0001t0021g0071 a0001c0001t0021g0074 others(2): Show a0001c0001t0021g0062 a0001c0001t0021g0071 a0001c0001t0021g0074 a0001c0001t0043g0197 a0001c0001t0043g0225	5	15	0.3333	13	c.49 others(22): Show c.491_*503dupAAAAAAAAAAAAA	SLITRK4	ENSG00000179542.16	transcript	ENST00000356928.2	protein_coding	2/2	503		chrX	TogoVar
SLITRK4_chrX_143617790_143641101	143636124	A A	AAAAAAAA others(6): Show AAAAAAAAAAAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp1 HG02080.hp2 HG02735.hp1 others(6): Show HG00597.hp1 HG02080.hp2 HG02735.hp1 HG03516.hp2 HG03831.hp2 NA18971.hp1 NA18973.hp2 NA18979.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 others(3): Show a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0039 a0001c0001t0084	a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0173 others(6): Show a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0173 a0001c0001t0014g0165 a0001c0001t0015g0037 a0001c0001t0015g0171 a0001c0001t0017g0200 a0001c0001t0039g0170 a0001c0001t0084g0186	9	43	0.2093	13	c.-44 others(22): Show c.-441_-440insATTTTTTTTTTTT	SLITRK4	ENSG00000179542.16	transcript	ENST00000356928.2	protein_coding		24		chrX	TogoVar
SLK_chr10_103962140_104034233	103974655	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0195 a0003c0003t0003g0195	1	96	0.0104	13	c.150 others(30): Show c.150+6761_150+6773dupTTTTTTTTTTTTT	SLK	ENSG00000065613.15	transcript	ENST00000369755.4	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLK_chr10_103962140_104034233	103992141	G G	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG01175.hp1 others(2): Show HG00735.hp1 HG00735.hp2 HG01175.hp1 HG01258.hp1 NA18961.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0015 a0001c0001 a0009c0015	a0001c0001t0001 a0001c0001t0004 a0001c0001t0020 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0020 a0009c0015t0001	a0001c0001t0001g0237 a0001c0001t0001g0268 a0001c0001t0004g0302 others(2): Show a0001c0001t0001g0237 a0001c0001t0001g0268 a0001c0001t0004g0302 a0001c0001t0020g0129 a0009c0015t0001g0253	5	20	0.2500	13	c.316 others(28): Show c.316-451_316-439dupTTTTTTTTTTTTT	SLK	ENSG00000065613.15	transcript	ENST00000369755.4	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLMAP_chr3_57751309_57935003	57754987	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0192 a0001c0001t0003g0192	1	101	0.0099	13	c.-24 others(24): Show c.-2460_-2459insTTTTTTTTTTTTT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding		1321		chr3	TogoVar
SLMAP_chr3_57751309_57935003	57853954	A A	AATTATAT others(6): Show AATTATATATATAT	intron_variant intron_variant	MODIFIER	HG01168.hp1 NA18943.hp2 NA19064.hp1 HG01168.hp1 NA18943.hp2 NA19064.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0010 a0001c0001 a0003c0010	a0001c0001t0004 a0001c0001t0036 a0003c0010t0001 a0001c0001t0004 a0001c0001t0036 a0003c0010t0001	a0001c0001t0004g0087 a0001c0001t0036g0200 a0003c0010t0001g0285 a0001c0001t0004g0087 a0001c0001t0036g0200 a0003c0010t0001g0285	3	233	0.0129	13	c.520 others(30): Show c.520-3779_520-3778insATTATATATATAT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	6/24			chr3	TogoVar
SLMAP_chr3_57751309_57935003	57869643	T T	TATATATA others(6): Show TATATATATATATA	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG02451.hp1 HG03579.hp2 HG01099.hp2 HG02451.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0179 a0001c0001t0011g0181 a0001c0001t0011g0191 a0001c0001t0011g0179 a0001c0001t0011g0181 a0001c0001t0011g0191	3	308	0.0097	13	c.123 others(32): Show c.1238-1992_1238-1980dupATATATATATATA	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57906300	C C	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18947.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0054 a0001c0001t0002g0054	1	241	0.0041	13	c.150 others(32): Show c.1502-1575_1502-1574insTTTTTTTTTTTTT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	17/24		INFO_REALIGN_3_PRIME	chr3	TogoVar

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