view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SSH2_chr17_29620938_29935228 | 29737920 | C | CTTATTTA others(9): Show |
intron_variant | MODIFIER | HG00280.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0201 | 1 | 232 | 0.0043 | 16 | c.189 others(35): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 3/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29761843 | A | ATGTGTGT others(9): Show |
intron_variant | MODIFIER | HG01243.hp1 HG02559.hp1 |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0220 a0002c0002t0002g0221 |
2 | 232 | 0.0086 | 16 | c.188 others(35): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 3/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29913347 | A | AAAAAAAT others(9): Show |
intron_variant | MODIFIER | HG02630.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0081 | 1 | 232 | 0.0043 | 16 | c.63+ others(33): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 1/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29913347 | A | AAAAAATA others(9): Show |
intron_variant | MODIFIER | HG02486.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0098 | 1 | 232 | 0.0043 | 16 | c.63+ others(33): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 1/15 | chr17 | TogoVar | |||||||
SSH2_chr17_29620938_29935228 | 29913347 | A | AAAATATA others(9): Show |
intron_variant | MODIFIER | HG02818.hp2 HG03130.hp1 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0086 a0001c0001t0003g0097 |
2 | 232 | 0.0086 | 16 | c.63+ others(33): Show |
SSH2 | ENSG00000141298.19 | transcript | ENST00000540801.6 | protein_coding | 1/15 | chr17 | TogoVar | |||||||
SSPN_chr12_26190573_26239777 | 26233331 | G | GATATATA others(9): Show |
3_prime_UTR_variant | MODIFIER | HG04204.hp1 NA18980.hp2 |
a0001 | a0001c0001 | a0001c0001t0041a0001c0001t0044 | a0001c0001t0041g0206 a0001c0001t0044g0266 |
2 | 384 | 0.0052 | 16 | c.*22 others(27): Show |
SSPN | ENSG00000123096.12 | transcript | ENST00000242729.7 | protein_coding | 3/3 | 2275 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SSPN_chr12_26190573_26239777 | 26233355 | T | TATATATA others(9): Show |
3_prime_UTR_variant | MODIFIER | HG02809.hp2 HG02976.hp1 HG03516.hp2 |
a0002 | a0002c0003 | a0002c0003t0048a0002c0003t0051a0002c0003t0052 | a0002c0003t0048g0010 a0002c0003t0051g0010 a0002c0003t0052g0010 |
3 | 384 | 0.0078 | 16 | c.*22 others(27): Show |
SSPN | ENSG00000123096.12 | transcript | ENST00000242729.7 | protein_coding | 3/3 | 2281 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SSTR1_chr14_38202904_38218067 | 38213114 | A | AACACACA others(9): Show |
downstream_gene_variant | MODIFIER | HG00733.hp1 HG01070.hp1 HG01168.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0005a0001c0001t0007 | a0001c0001t0003g0003 a0001c0001t0005g0002 a0001c0001t0007g0001 others(2): Show |
13 | 456 | 0.0285 | 16 | c.*25 others(27): Show |
SSTR1 | ENSG00000139874.6 | transcript | ENST00000267377.3 | protein_coding | 48 | chr14 | TogoVar | |||||||
SSTR2_chr17_73160010_73181633 | 73164123 | G | GGTGTGTG others(9): Show |
upstream_gene_variant | MODIFIER | HG00544.hp2 HG03017.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0134 | a0001c0001t0001g0129 a0001c0001t0134g0075 |
2 | 454 | 0.0044 | 16 | c.-12 others(27): Show |
SSTR2 | ENSG00000180616.9 | transcript | ENST00000357585.4 | protein_coding | 886 | chr17 | TogoVar | |||||||
SSTR2_chr17_73160010_73181633 | 73171921 | C | CAAAAAAA others(9): Show |
3_prime_UTR_variant | MODIFIER | HG02080.hp2 | a0001 | a0001c0001 | a0001c0001t0159 | a0001c0001t0159g0037 | 1 | 454 | 0.0022 | 16 | c.*15 others(27): Show |
SSTR2 | ENSG00000180616.9 | transcript | ENST00000357585.4 | protein_coding | 2/2 | 1529 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SSU72L3_chr11_4324790_4335864 | 4332748 | G | GAGTTTCT others(9): Show |
downstream_gene_variant | MODIFIER | NA18993.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 340 | 0.0029 | 16 | c.*22 others(27): Show |
SSU72L3 | ENSG00000284546.2 | transcript | ENST00000640302.2 | protein_coding | 1885 | chr11 | TogoVar | |||||||
SSX1_chrX_48250392_48272444 | 48267278 | C | CACACACA others(9): Show |
3_prime_UTR_variant | MODIFIER | NA18960.hp1 NA19054.hp2 |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0012 | a0001c0001t0011g0004 a0001c0001t0012g0004 |
2 | 339 | 0.0059 | 16 | c.*42 others(25): Show |
SSX1 | ENSG00000126752.8 | transcript | ENST00000376919.4 | protein_coding | 8/8 | 892 | chrX | TogoVar | ||||||
SSX4B_chrX_48397082_48416960 | 48414274 | G | GGAAAGAA others(9): Show |
upstream_gene_variant | MODIFIER | HG02027.hp2 HG02129.hp1 HG02970.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0002g0005 |
5 | 180 | 0.0278 | 16 | c.-24 others(27): Show |
SSX4B | ENSG00000269791.6 | transcript | ENST00000595235.6 | protein_coding | 2315 | chrX | TogoVar | |||||||
SSX4_chrX_48378539_48398347 | 48381100 | T | TTTTCTTT others(9): Show |
upstream_gene_variant | MODIFIER | HG02451.hp1 NA19056.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0042 a0001c0001t0002g0026 |
2 | 104 | 0.0192 | 16 | c.-24 others(27): Show |
SSX4 | ENSG00000268009.6 | transcript | ENST00000595689.3 | protein_coding | 2438 | chrX | TogoVar | |||||||
SSX5_chrX_48181220_48201795 | 48198559 | G | GGAAGGAA others(9): Show |
upstream_gene_variant | MODIFIER | HG01361.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 326 | 0.0031 | 16 | c.-18 others(27): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 1765 | chrX | TogoVar | |||||||
SSX5_chrX_48181220_48201795 | 48198559 | G | GGAAGGAA others(9): Show |
upstream_gene_variant | MODIFIER | NA18952.hp1 NA18998.hp2 NA19064.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0001 a0001c0001t0007g0108 |
3 | 326 | 0.0092 | 16 | c.-18 others(27): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 1765 | chrX | TogoVar | |||||||
SSX5_chrX_48181220_48201795 | 48198559 | G | GGAAGGAA others(9): Show |
upstream_gene_variant | MODIFIER | HG02630.hp2 NA18957.hp1 NA18962.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0009 | a0001c0001t0001g0001 a0001c0001t0009g0019 |
3 | 326 | 0.0092 | 16 | c.-18 others(27): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 1765 | chrX | TogoVar | |||||||
SSX7_chrX_52639061_52659900 | 52640332 | G | GTATATAT others(9): Show |
downstream_gene_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0032 | 1 | 305 | 0.0033 | 16 | c.*43 others(27): Show |
SSX7 | ENSG00000187754.9 | transcript | ENST00000298181.6 | protein_coding | 3728 | chrX | TogoVar | |||||||
SSX7_chrX_52639061_52659900 | 52656251 | A | AAAGGAAG others(9): Show |
upstream_gene_variant | MODIFIER | HG01256.hp1 HG03669.hp1 NA18942.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 a0001c0001t0001g0037 a0001c0001t0001g0038 others(2): Show |
5 | 305 | 0.0164 | 16 | c.-15 others(27): Show |
SSX7 | ENSG00000187754.9 | transcript | ENST00000298181.6 | protein_coding | 1352 | chrX | TogoVar | |||||||
SSX7_chrX_52639061_52659900 | 52656302 | G | GGAAGGAA others(9): Show |
upstream_gene_variant | MODIFIER | HG00099.hp2 HG01070.hp2 HG01071.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0027 |
4 | 305 | 0.0131 | 16 | c.-15 others(27): Show |
SSX7 | ENSG00000187754.9 | transcript | ENST00000298181.6 | protein_coding | 1403 | chrX | TogoVar | |||||||
ST13_chr22_40819535_40861639 | 40820663 | T | TAAAAAAA others(9): Show |
downstream_gene_variant | MODIFIER | HG03834.hp2 HG06807.hp1 NA20129.hp1 |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0001 | a0001c0001t0001g0007 a0003c0003t0001g0100 |
3 | 344 | 0.0087 | 16 | c.*58 others(27): Show |
ST13 | ENSG00000100380.15 | transcript | ENST00000216218.8 | protein_coding | 3871 | chr22 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52130082 | G | GAAAGAAA others(9): Show |
intron_variant | MODIFIER | HG02976.hp2 NA18906.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0048 a0001c0001t0007g0008 |
2 | 104 | 0.0192 | 16 | c.266 others(35): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 22/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52130119 | A | AAAAGAAA others(9): Show |
intron_variant | MODIFIER | HG01884.hp1 HG02280.hp1 HG02451.hp2 others(4): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0010a0001c0001t0014others(1): Show | a0001c0001t0001g0012 a0001c0001t0001g0104 a0001c0001t0010g0067 others(4): Show |
7 | 104 | 0.0673 | 16 | c.266 others(35): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 22/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52130119 | A | AAAGAAAA others(9): Show |
intron_variant | MODIFIER | HG00609.hp1 HG02155.hp2 NA18942.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0009 | a0001c0001t0002a0001c0002t0002a0001c0009t0001 | a0001c0001t0002g0020 a0001c0001t0002g0103 a0001c0002t0002g0010 others(2): Show |
5 | 104 | 0.0481 | 16 | c.266 others(35): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 22/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52367234 | T | TCACACAC others(9): Show |
intron_variant | MODIFIER | HG00609.hp1 HG01243.hp2 HG01978.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0011 | a0001c0001t0001a0001c0001t0004a0001c0002t0002others(1): Show | a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 others(3): Show |
6 | 104 | 0.0577 | 16 | c.-46 others(37): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST18_chr8_52105838_52414756 | 52367236 | T | TCACACAC others(9): Show |
intron_variant | MODIFIER | HG03540.hp2 NA21309.hp1 |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0011a0003c0004t0001 | a0001c0001t0011g0040 a0003c0004t0001g0034 |
2 | 104 | 0.0192 | 16 | c.-46 others(37): Show |
ST18 | ENSG00000147488.13 | transcript | ENST00000689386.1 | protein_coding | 2/25 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133540748 | T | TATATATA others(9): Show |
intron_variant | MODIFIER | HG01167.hp2 HG01884.hp2 HG02486.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0003t0008a0001c0003t0024others(1): Show | a0001c0001t0001g0291 a0001c0003t0008g0017 a0001c0003t0008g0144 others(3): Show |
6 | 332 | 0.0181 | 16 | c.-42 others(35): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 2/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133541147 | A | AGAGAGAG others(9): Show |
intron_variant | MODIFIER | HG02970.hp2 NA20129.hp2 |
a0001 | a0001c0003a0001c0008 | a0001c0003t0008a0001c0008t0075 | a0001c0003t0008g0020 a0001c0008t0075g0308 |
2 | 332 | 0.0060 | 16 | c.-42 others(35): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 2/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133562841 | C | CCTTCCTT others(9): Show |
intron_variant | MODIFIER | HG01884.hp1 HG02109.hp2 HG02572.hp2 others(1): Show |
a0001a0002a0004 | a0001c0003a0001c0017a0002c0005others(1): Show | a0001c0003t0056a0001c0017t0035a0002c0005t0003others(1): Show | a0001c0003t0056g0011 a0001c0017t0035g0006 a0002c0005t0003g0007 others(1): Show |
4 | 332 | 0.0121 | 16 | c.-58 others(35): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 1/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133564519 | T | TACACACA others(9): Show |
intron_variant | MODIFIER | HG00544.hp1 HG01243.hp2 HG01358.hp1 others(15): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0002a0001c0002t0071others(4): Show | a0001c0001t0001g0053 a0001c0001t0001g0116 a0001c0001t0001g0118 others(15): Show |
18 | 332 | 0.0542 | 16 | c.-58 others(35): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 1/9 | chr8 | TogoVar | |||||||
ST3GAL1_chr8_133449848_133576887 | 133566376 | T | TCCTCTGT others(9): Show |
intron_variant | MODIFIER | NA18942.hp2 NA18970.hp2 NA19081.hp1 |
a0001 | a0001c0002a0001c0004 | a0001c0002t0009a0001c0004t0028 | a0001c0002t0009g0330 a0001c0002t0009g0331 a0001c0004t0028g0332 |
3 | 332 | 0.0090 | 16 | c.-58 others(35): Show |
ST3GAL1 | ENSG00000008513.17 | transcript | ENST00000522652.6 | protein_coding | 1/9 | chr8 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70410240 | C | CTTTTTTT others(9): Show |
intron_variant | MODIFIER | HG01169.hp2 HG01361.hp2 NA18966.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0072 | a0001c0001t0002g0041 a0001c0001t0002g0051 a0001c0001t0072g0080 |
3 | 312 | 0.0096 | 16 | c.-10 others(39): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL2_chr16_70370977_70444100 | 70429588 | C | CAAAAAAA others(9): Show |
intron_variant | MODIFIER | HG03471.hp1 | a0001 | a0001c0001 | a0001c0001t0029 | a0001c0001t0029g0274 | 1 | 312 | 0.0032 | 16 | c.-10 others(37): Show |
ST3GAL2 | ENSG00000157350.13 | transcript | ENST00000342907.3 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
ST3GAL3_chr1_43702536_43936159 | 43744652 | C | CAATAAAT others(9): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00438.hp2 HG00558.hp2 others(21): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0002a0001c0001t0004a0001c0001t0005others(2): Show | a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 others(21): Show |
24 | 274 | 0.0876 | 16 | c.118 others(33): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43744655 | A | AAAATAAA others(9): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00408.hp2 HG00558.hp1 others(34): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0065 others(34): Show |
37 | 274 | 0.1350 | 16 | c.118 others(33): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43759065 | G | GCGCGCAC others(9): Show |
intron_variant | MODIFIER | NA18966.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0147 | 1 | 274 | 0.0037 | 16 | c.118 others(35): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43807417 | A | AAAATAAA others(9): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00558.hp2 HG00621.hp1 others(31): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0028 a0001c0001t0001g0039 a0001c0001t0001g0139 others(31): Show |
34 | 274 | 0.1241 | 16 | c.167 others(33): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43815883 | T | TTGGATGG others(9): Show |
intron_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0257 | 1 | 274 | 0.0037 | 16 | c.209 others(32): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43857469 | C | CTCCTTCC others(9): Show |
intron_variant | MODIFIER | HG06807.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0270 | 1 | 274 | 0.0037 | 16 | c.302 others(35): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43857568 | T | TTTCCTTC others(9): Show |
intron_variant | MODIFIER | HG01070.hp1 HG02109.hp2 HG04199.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0023 a0001c0001t0002g0055 a0001c0001t0002g0088 others(2): Show |
5 | 274 | 0.0183 | 16 | c.302 others(35): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43857582 | C | CCCTTCCT others(9): Show |
intron_variant | MODIFIER | HG01074.hp1 HG01496.hp1 HG02559.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0146 a0001c0001t0001g0150 a0001c0001t0001g0226 others(5): Show |
8 | 274 | 0.0292 | 16 | c.302 others(35): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 5/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL3_chr1_43702536_43936159 | 43926521 | A | AGAGGTTG others(9): Show |
intron_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG02615.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0203 a0001c0001t0003g0204 a0001c0001t0003g0215 others(1): Show |
4 | 274 | 0.0146 | 16 | c.103 others(35): Show |
ST3GAL3 | ENSG00000126091.21 | transcript | ENST00000347631.8 | protein_coding | 11/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
ST3GAL4_chr11_126350686_126419638 | 126354409 | T | TAATAAAT others(9): Show |
upstream_gene_variant | MODIFIER | HG01168.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0204 | 1 | 324 | 0.0031 | 16 | c.-14 others(27): Show |
ST3GAL4 | ENSG00000110080.20 | transcript | ENST00000444328.7 | protein_coding | 1276 | chr11 | TogoVar | |||||||
ST3GAL4_chr11_126350686_126419638 | 126359729 | C | CTCCCTCC others(9): Show |
intron_variant | MODIFIER | HG02896.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0083 | 1 | 324 | 0.0031 | 16 | c.-61 others(33): Show |
ST3GAL4 | ENSG00000110080.20 | transcript | ENST00000444328.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST3GAL4_chr11_126350686_126419638 | 126371163 | C | CTTTTTTT others(9): Show |
intron_variant | MODIFIER | HG00099.hp2 HG01109.hp1 HG01109.hp2 others(25): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0005a0001c0002t0001others(3): Show | a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 others(25): Show |
28 | 324 | 0.0864 | 16 | c.-61 others(35): Show |
ST3GAL4 | ENSG00000110080.20 | transcript | ENST00000444328.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST3GAL4_chr11_126350686_126419638 | 126403331 | G | GCGCTGCT others(9): Show |
intron_variant | MODIFIER | HG01255.hp1 HG01496.hp1 HG01516.hp2 others(2): Show |
a0001 | a0001c0002a0001c0005 | a0001c0002t0001a0001c0005t0001 | a0001c0002t0001g0002 a0001c0002t0001g0017 a0001c0002t0001g0061 others(1): Show |
5 | 324 | 0.0154 | 16 | c.-60 others(33): Show |
ST3GAL4 | ENSG00000110080.20 | transcript | ENST00000444328.7 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
ST3GAL6_chr3_98758340_98800852 | 98786955 | A | AGTGTGTG others(9): Show |
intron_variant | MODIFIER | HG01257.hp2 NA18950.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0107 a0001c0001t0002g0110 |
2 | 372 | 0.0054 | 16 | c.432 others(33): Show |
ST3GAL6 | ENSG00000064225.13 | transcript | ENST00000483910.6 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 186948528 | A | AGTGTGTG others(9): Show |
intron_variant | MODIFIER | HG01257.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0277 | 1 | 362 | 0.0028 | 16 | c.-32 others(37): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187029088 | T | TAAAAAAA others(9): Show |
intron_variant | MODIFIER | HG02559.hp1 HG03471.hp2 |
a0001 | a0001c0003 | a0001c0003t0025a0001c0003t0049 | a0001c0003t0025g0015 a0001c0003t0049g0141 |
2 | 362 | 0.0055 | 16 | c.-18 others(35): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
ST6GAL1_chr3_186925526_187083553 | 187062574 | T | TCACACAC others(9): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00621.hp2 HG02083.hp1 others(16): Show |
a0001 | a0001c0001a0001c0003a0001c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(10): Show | a0001c0001t0001g0236 a0001c0001t0002g0290 a0001c0001t0002g0295 others(16): Show |
19 | 362 | 0.0525 | 16 | c.706 others(35): Show |
ST6GAL1 | ENSG00000073849.16 | transcript | ENST00000169298.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar |