Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SORCS3_chr10_104636290_105270242	104696298	A A	ATAATATA others(10): Show ATAATATATGATATATAT	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0071 a0001c0002t0006g0071	1	132	0.0076	17	c.627 others(36): Show c.627+54344_627+54345insTAATATATGATATATAT	SORCS3	ENSG00000156395.14	transcript	ENST00000369701.8	protein_coding	1/26			chr10	TogoVar
SORCS3_chr10_104636290_105270242	104735456	G G	GTTTTTTT others(10): Show GTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01358.hp2 HG03130.hp2 others(1): Show HG01243.hp2 HG01358.hp2 HG03130.hp2 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0002t0003 a0001c0001t0002 a0001c0001t0004 a0001c0002t0003	a0001c0001t0002g0018 a0001c0001t0002g0099 a0001c0001t0004g0112 others(1): Show a0001c0001t0002g0018 a0001c0001t0002g0099 a0001c0001t0004g0112 a0001c0002t0003g0120	4	16	0.2500	17	c.627 others(36): Show c.627+93507_627+93523dupTTTTTTTTTTTTTTTTT	SORCS3	ENSG00000156395.14	transcript	ENST00000369701.8	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr10	TogoVar
SORCS3_chr10_104636290_105270242	104876703	T T	TCTTCCTT others(10): Show TCTTCCTTCCTTCCTTCC	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0074 a0001c0002t0005g0074	1	34	0.0294	17	c.695 others(36): Show c.695+33844_695+33845insCTTCCTTCCTTCCTTCC	SORCS3	ENSG00000156395.14	transcript	ENST00000369701.8	protein_coding	2/26			chr10	TogoVar
SORCS3_chr10_104636290_105270242	104940239	T T	TATATATA others(10): Show TATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0121 a0001c0001t0002g0121	1	129	0.0078	17	c.795 others(36): Show c.795+24307_795+24308insATATATATATATATATA	SORCS3	ENSG00000156395.14	transcript	ENST00000369701.8	protein_coding	3/26			chr10	TogoVar
SORCS3_chr10_104636290_105270242	105003998	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02280.hp2 HG01433.hp1 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0003 a0001c0001t0004 a0001c0002t0003	a0001c0001t0004g0125 a0001c0002t0003g0128 a0001c0001t0004g0125 a0001c0002t0003g0128	2	58	0.0345	17	c.954 others(36): Show c.954+26506_954+26507insTTTTTTTTTTTTTTTTT	SORCS3	ENSG00000156395.14	transcript	ENST00000369701.8	protein_coding	4/26		INFO_REALIGN_3_PRIME	chr10	TogoVar
SORCS3_chr10_104636290_105270242	105125709	A A	ACACACAC others(10): Show ACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG03927.hp1 HG01099.hp2 HG03927.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0086 a0001c0002t0001g0105 a0001c0002t0001g0086 a0001c0002t0001g0105	2	134	0.0149	17	c.121 others(38): Show c.1213-13688_1213-13687insCACACACACACACACAC	SORCS3	ENSG00000156395.14	transcript	ENST00000369701.8	protein_coding	7/26			chr10	TogoVar
SORL1_chr11_121447314_121638763	121540522	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02040.hp1 HG03540.hp2 others(8): Show HG02027.hp1 HG02040.hp1 HG03540.hp2 HG04184.hp1 NA18941.hp2 NA18966.hp1 NA18985.hp2 NA18990.hp1 NA19000.hp2 NA19074.hp1 NA19086.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0004 a0001c0046 others(1): Show a0001c0002 a0001c0004 a0001c0046 a0002c0014	a0001c0002t0001 a0001c0002t0004 a0001c0002t0006 others(4): Show a0001c0002t0001 a0001c0002t0004 a0001c0002t0006 a0001c0002t0015 a0001c0004t0002 a0001c0046t0002 a0002c0014t0004	a0001c0002t0001g0103 a0001c0002t0004g0003 a0001c0002t0004g0078 others(8): Show a0001c0002t0001g0103 a0001c0002t0004g0003 a0001c0002t0004g0078 a0001c0002t0004g0085 a0001c0002t0004g0087 a0001c0002t0004g0108 a0001c0002t0006g0020 a0001c0002t0015g0017 a0001c0004t0002g0132 a0001c0046t0002g0174 a0002c0014t0004g0076	11	36	0.3056	17	c.168 others(36): Show c.1686-3012_1686-3011insAAAAAAAAAAAAAAAAA	SORL1	ENSG00000137642.13	transcript	ENST00000260197.12	protein_coding	12/47		INFO_REALIGN_3_PRIME	chr11	TogoVar
SOS1_chr2_38976549_39126051	39075588	G G	GAGTCTAG others(10): Show GAGTCTAGGAGTCCGAGA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00597.hp2 others(126): Show HG00323.hp1 HG00323.hp2 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01099.hp2 HG01106.hp1 HG01192.hp1 HG01192.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp1 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02055.hp1 HG02109.hp2 HG02135.hp2 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02300.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02698.hp1 HG02698.hp2 HG02809.hp1 HG02818.hp1 HG02896.hp1 HG02922.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03516.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp2 HG04115.hp2 HG04199.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18942.hp1 NA18945.hp2 NA18948.hp2 NA18949.hp2 NA18952.hp2 NA18953.hp2 NA18955.hp2 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp2 NA18988.hp2 NA18993.hp2 NA18994.hp1 NA18995.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19002.hp2 NA19005.hp2 NA19009.hp2 NA19011.hp2 NA19043.hp2 NA19054.hp1 NA19056.hp1 NA19056.hp2 NA19065.hp1 NA19068.hp2 NA19074.hp2 NA19077.hp1 NA19079.hp2 NA19083.hp1 NA19087.hp2 NA19088.hp2 NA19090.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0004 a0001c0008 others(4): Show a0001c0001 a0001c0004 a0001c0008 a0002c0003 a0003c0005 a0004c0006 a0005c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(20): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0033 a0001c0001t0034 a0001c0004t0013 a0001c0008t0003 a0002c0003t0003 a0003c0005t0003 a0004c0006t0009 a0005c0007t0001	a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 others(126): Show a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0115 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0158 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0174 a0001c0001t0003g0014 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0070 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0099 a0001c0001t0003g0101 a0001c0001t0003g0109 a0001c0001t0003g0113 a0001c0001t0003g0114 a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0118 a0001c0001t0003g0120 a0001c0001t0003g0142 a0001c0001t0003g0144 a0001c0001t0003g0155 a0001c0001t0003g0156 a0001c0001t0003g0163 a0001c0001t0003g0167 a0001c0001t0003g0169 a0001c0001t0003g0172 a0001c0001t0003g0175 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0004g0025 a0001c0001t0005g0146 a0001c0001t0005g0147 a0001c0001t0006g0208 a0001c0001t0006g0243 a0001c0001t0006g0244 a0001c0001t0006g0245 a0001c0001t0007g0111 a0001c0001t0007g0112 a0001c0001t0007g0145 a0001c0001t0009g0012 a0001c0001t0009g0159 a0001c0001t0010g0013 a0001c0001t0010g0129 a0001c0001t0010g0168 a0001c0001t0011g0181 a0001c0001t0011g0182 a0001c0001t0011g0183 a0001c0001t0026g0173 a0001c0001t0027g0067 a0001c0001t0028g0128 a0001c0001t0029g0071 a0001c0001t0030g0139 a0001c0001t0031g0133 a0001c0001t0033g0184 a0001c0001t0034g0185 a0001c0004t0013g0001 a0001c0004t0013g0002 a0001c0008t0003g0119 a0002c0003t0003g0165 a0002c0003t0003g0166 a0002c0003t0003g0170 a0003c0005t0003g0171 a0004c0006t0009g0160 a0005c0007t0001g0104	129	244	0.5287	17	c.88- others(32): Show c.88-7852_88-7836dupTCTCGGACTCCTAGACT	SOS1	ENSG00000115904.15	transcript	ENST00000402219.8	protein_coding	1/22			chr2	TogoVar
SOS2_chr14_50112130_50236578	50122391	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0362 a0001c0003t0001g0362	1	36	0.0278	17	c.338 others(36): Show c.3380-2024_3380-2008dupAAAAAAAAAAAAAAAAA	SOS2	ENSG00000100485.12	transcript	ENST00000216373.10	protein_coding	21/22			chr14	TogoVar
SOS2_chr14_50112130_50236578	50220405	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02257.hp2 NA18943.hp1 others(2): Show HG02027.hp2 HG02257.hp2 NA18943.hp1 NA18951.hp2 NA18993.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0073 a0001c0002t0001g0074 a0001c0002t0001g0079 others(2): Show a0001c0002t0001g0073 a0001c0002t0001g0074 a0001c0002t0001g0079 a0001c0002t0001g0085 a0001c0002t0001g0095	5	44	0.1136	17	c.87+ others(34): Show c.87+10775_87+10791dupTTTTTTTTTTTTTTTTT	SOS2	ENSG00000100485.12	transcript	ENST00000216373.10	protein_coding	1/22			chr14	TogoVar
SOS2_chr14_50112130_50236578	50234255	T T	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0138 a0001c0003t0005g0138	1	46	0.0217	17	c.-29 others(28): Show c.-2973_-2972insTTTTTTTTTTTTTTTTT	SOS2	ENSG00000100485.12	transcript	ENST00000216373.10	protein_coding		2678		chr14	TogoVar
SOX11_chr2_5687384_5706385	5688867	T T	TGTGTGTG others(10): Show TGTGTGTGTGTGTGTGTG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0000 a0001c0001t0036g0000	1	428	0.0023	17	c.-38 others(28): Show c.-3855_-3854insGTGTGTGTGTGTGTGTG	SOX11	ENSG00000176887.7	transcript	ENST00000322002.5	protein_coding		3516		chr2	TogoVar
SOX13_chr1_204068115_204132743	204105413	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0188 a0001c0001t0010g0188	1	138	0.0072	17	c.-1- others(32): Show c.-1-7492_-1-7491insTTTTTTTTTTTTTTTTT	SOX13	ENSG00000143842.15	transcript	ENST00000367204.6	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
SOX30_chr5_157620679_157657438	157632047	T T	TAAAAAAA others(10): Show TAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG02257.hp1 NA18956.hp1 others(11): Show HG02135.hp1 HG02257.hp1 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18972.hp1 NA18980.hp1 NA18983.hp1 NA18991.hp2 NA18995.hp1 NA19000.hp2 NA19078.hp1 NA19090.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0013 a0001c0002t0001g0062 a0001c0002t0001g0063 others(9): Show a0001c0002t0001g0013 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0069 a0001c0002t0001g0072 a0001c0002t0001g0073 a0001c0002t0001g0077 a0001c0002t0001g0078 a0001c0002t0001g0079 a0001c0002t0001g0082 a0001c0002t0001g0084 a0001c0002t0001g0102	14	134	0.1045	17	c.188 others(36): Show c.1881-5343_1881-5327dupTTTTTTTTTTTTTTTTT	SOX30	ENSG00000039600.11	transcript	ENST00000265007.11	protein_coding	4/4			chr5	TogoVar
SOX5_chr12_23524504_23954670	23578117	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01934.hp1 HG02738.hp2 others(2): Show HG01261.hp2 HG01934.hp1 HG02738.hp2 HG03017.hp1 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0074 a0001c0001t0075 others(1): Show a0001c0001t0021 a0001c0001t0074 a0001c0001t0075 a0001c0001t0090	a0001c0001t0021g0129 a0001c0001t0021g0139 a0001c0001t0074g0175 others(2): Show a0001c0001t0021g0129 a0001c0001t0021g0139 a0001c0001t0074g0175 a0001c0001t0075g0073 a0001c0001t0090g0072	5	16	0.3125	17	c.116 others(36): Show c.1165-2296_1165-2280dupTTTTTTTTTTTTTTTTT	SOX5	ENSG00000134532.20	transcript	ENST00000451604.7	protein_coding	9/14			chr12	TogoVar
SOX5_chr12_23524504_23954670	23872164	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01928.hp2 HG02165.hp2 others(2): Show HG01175.hp1 HG01928.hp2 HG02165.hp2 NA18959.hp2 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0041 a0001c0001t0097 others(1): Show a0001c0001t0008 a0001c0001t0041 a0001c0001t0097 a0001c0001t0102	a0001c0001t0008g0037 a0001c0001t0008g0076 a0001c0001t0041g0010 others(2): Show a0001c0001t0008g0037 a0001c0001t0008g0076 a0001c0001t0041g0010 a0001c0001t0097g0062 a0001c0001t0102g0016	5	90	0.0556	17	c.270 others(36): Show c.270+23612_270+23628dupAAAAAAAAAAAAAAAAA	SOX5	ENSG00000134532.20	transcript	ENST00000451604.7	protein_coding	2/14			chr12	TogoVar
SOX6_chr11_15961449_16361546	16349715	A A	AGGAAGGA others(10): Show AGGAAGGAAGGAAGGAAG	intron_variant intron_variant	MODIFIER	NA18980.hp1 NA18980.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0141 a0001c0002t0001g0141	1	118	0.0085	17	c.-5+ others(32): Show c.-5+6378_-5+6379insCTTCCTTCCTTCCTTCC	SOX6	ENSG00000110693.19	transcript	ENST00000683767.1	protein_coding	1/15			chr11	TogoVar
SP110_chr2_230160186_230224984	230206595	T T	TATATATA others(10): Show TATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA18998.hp1 NA19001.hp2 NA19060.hp2 NA18998.hp1 NA19001.hp2 NA19060.hp2	a0001 a0004 a0021 a0001 a0004 a0021	a0001c0001 a0004c0004 a0021c0022 a0001c0001 a0004c0004 a0021c0022	a0001c0001t0001 a0004c0004t0004 a0021c0022t0001 a0001c0001t0001 a0004c0004t0004 a0021c0022t0001	a0001c0001t0001g0230 a0004c0004t0004g0055 a0021c0022t0001g0147 a0001c0001t0001g0230 a0004c0004t0004g0055 a0021c0022t0001g0147	3	38	0.0789	17	c.898 others(34): Show c.898+1395_898+1396insTATATATATATATATAT	SP110	ENSG00000135899.20	transcript	ENST00000258381.11	protein_coding	8/18			chr2	TogoVar
SP140L_chr2_230322193_230408732	230354881	G G	GAAAGAAA others(10): Show GAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG02074.hp1 HG02109.hp2 others(8): Show HG02004.hp1 HG02074.hp1 HG02109.hp2 HG02155.hp1 HG03225.hp2 HG03540.hp1 NA18906.hp2 NA18949.hp1 NA18978.hp2 NA18988.hp2 NA19010.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0002c0002 others(1): Show a0001c0001 a0001c0004 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0004t0006 a0002c0002t0001 others(2): Show a0001c0001t0001 a0001c0004t0006 a0002c0002t0001 a0003c0003t0001 a0003c0003t0003	a0001c0001t0001g0077 a0001c0001t0001g0148 a0001c0001t0001g0149 others(8): Show a0001c0001t0001g0077 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0163 a0001c0004t0006g0177 a0002c0002t0001g0117 a0002c0002t0001g0131 a0002c0002t0001g0162 a0003c0003t0001g0028 a0003c0003t0001g0074 a0003c0003t0003g0165	11	280	0.0393	17	c.108 others(34): Show c.108-2908_108-2907insAAAAGAAAGAAAGAAAG	SP140L	ENSG00000185404.17	transcript	ENST00000415673.7	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
SP140L_chr2_230322193_230408732	230354885	G G	GAAAGAAA others(10): Show GAAAGAAAGAAAGAAAGA	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0080	1	330	0.0030	17	c.108 others(34): Show c.108-2908_108-2907insAAAGAAAAGAAAGAAAG	SP140L	ENSG00000185404.17	transcript	ENST00000415673.7	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
SP140L_chr2_230322193_230408732	230357994	G G	GTAAAGCA others(10): Show GTAAAGCAGCCCCAAAAT	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0012 a0012	a0012c0016 a0012c0016	a0012c0016t0001 a0012c0016t0001	a0012c0016t0001g0127 a0012c0016t0001g0127	1	334	0.0030	17	c.270 others(30): Show c.270+27_270+28insTAAAGCAGCCCCAAAAT	SP140L	ENSG00000185404.17	transcript	ENST00000415673.7	protein_coding	3/18			chr2	TogoVar
SP3_chr2_173895775_173970373	173939764	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02897.hp2 HG02897.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0117 a0001c0001t0007g0117	1	18	0.0556	17	c.163 others(38): Show c.1639+15092_1639+15108dupTTTTTTTTTTTTTTTTT	SP3	ENSG00000172845.18	transcript	ENST00000310015.12	protein_coding	4/6			chr2	TogoVar
SPACA7_chr13_112371355_112439689	112416289	T T	TTGTTGTT others(10): Show TTGTTGTTGTTGTTGTTG	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18962.hp1 NA18940.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0025 a0001c0001t0002g0031 a0001c0001t0002g0025 a0001c0001t0002g0031	2	179	0.0112	17	c.445 others(36): Show c.445+15126_445+15127insGTTGTTGTTGTTGTTGT	SPACA7	ENSG00000153498.12	transcript	ENST00000283550.8	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr13	TogoVar
SPAG11A_chr8_7843008_7865943	7863213	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00642.hp2 HG06807.hp2 NA18948.hp2 others(2): Show HG00642.hp2 HG06807.hp2 NA18948.hp2 NA18973.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0015 a0001c0001t0001g0038 a0001c0001t0001g0086 others(2): Show a0001c0001t0001g0015 a0001c0001t0001g0038 a0001c0001t0001g0086 a0001c0001t0002g0031 a0001c0001t0003g0013	5	8	0.6250	17	c.23 others(28): Show c.2380_*2381insTTTTTTTTTTTTTTTTT	SPAG11A	ENSG00000178287.18	transcript	ENST00000642566.2	protein_coding		2271		chr8	TogoVar
SPAG11B_chr8_7445603_7468542	7448302	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	6	0.1667	17	c.23 others(28): Show c.2394_*2410dupTTTTTTTTTTTTTTTTT	SPAG11B	ENSG00000164871.18	transcript	ENST00000398462.7	protein_coding		2300		chr8	TogoVar
SPAG16_chr2_213279464_214415501	213292663	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	65	0.0154	17	c.137 others(34): Show c.137-3389_137-3388insAAAAAAAAAAAAAAAAA	SPAG16	ENSG00000144451.20	transcript	ENST00000331683.10	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
SPAG16_chr2_213279464_214415501	213642820	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03195.hp1 NA19087.hp2 HG03098.hp2 HG03195.hp1 NA19087.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0025 a0001c0001t0001g0041 a0003c0003t0001g0043 a0001c0001t0001g0025 a0001c0001t0001g0041 a0003c0003t0001g0043	3	56	0.0536	17	c.107 others(40): Show c.1070+152743_1070+152759dupAAAAAAAAAAAAAAAAA	SPAG16	ENSG00000144451.20	transcript	ENST00000331683.10	protein_coding	10/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
SPAG16_chr2_213279464_214415501	214012288	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0067 a0001c0001t0002g0067	1	34	0.0294	17	c.140 others(36): Show c.1401-1658_1401-1642dupTTTTTTTTTTTTTTTTT	SPAG16	ENSG00000144451.20	transcript	ENST00000331683.10	protein_coding	12/15		INFO_REALIGN_3_PRIME	chr2	TogoVar
SPAG17_chr1_117948590_118190228	117969505	G G	GGAGGCAG others(10): Show GGAGGCAGAGGTTGCAGT	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA19043.hp2 NA18906.hp2 NA19043.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0204 a0001c0004t0001g0218 a0001c0004t0001g0204 a0001c0004t0001g0218	2	264	0.0076	17	c.638 others(34): Show c.6387+534_6387+550dupACTGCAACCTCTGCCTC	SPAG17	ENSG00000155761.14	transcript	ENST00000336338.10	protein_coding	46/48			chr1	TogoVar
SPAG17_chr1_117948590_118190228	118069344	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00733.hp2 others(43): Show HG00280.hp1 HG00323.hp1 HG00733.hp2 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01099.hp1 HG01167.hp1 HG01255.hp1 HG01358.hp1 HG01496.hp2 HG01515.hp2 HG01928.hp2 HG01943.hp2 HG01952.hp1 HG01981.hp1 HG02040.hp1 HG02056.hp1 HG02074.hp2 HG02148.hp1 HG02258.hp1 HG02280.hp1 HG02965.hp2 HG03017.hp2 HG03239.hp1 HG03486.hp2 HG03710.hp2 HG04199.hp1 HG06807.hp2 NA18522.hp1 NA18963.hp2 NA18967.hp1 NA18983.hp2 NA18990.hp2 NA19012.hp1 NA19043.hp1 NA19057.hp2 NA19058.hp1 NA19074.hp2 NA19079.hp2 NA19084.hp1 NA19086.hp2 NA19087.hp2 NA19240.hp1 NA20300.hp1 NA21309.hp2	a0001 a0003 a0004 others(5): Show a0001 a0003 a0004 a0007 a0009 a0011 a0017 a0018	a0001c0004 a0003c0003 a0003c0029 others(6): Show a0001c0004 a0003c0003 a0003c0029 a0004c0005 a0007c0013 a0009c0009 a0011c0015 a0017c0028 a0018c0030	a0001c0004t0003 a0003c0003t0001 a0003c0003t0003 others(7): Show a0001c0004t0003 a0003c0003t0001 a0003c0003t0003 a0003c0029t0001 a0004c0005t0001 a0007c0013t0001 a0009c0009t0002 a0011c0015t0002 a0017c0028t0001 a0018c0030t0001	a0001c0004t0003g0082 a0003c0003t0001g0064 a0003c0003t0001g0086 others(43): Show a0001c0004t0003g0082 a0003c0003t0001g0064 a0003c0003t0001g0086 a0003c0003t0001g0087 a0003c0003t0001g0088 a0003c0003t0001g0099 a0003c0003t0001g0101 a0003c0003t0001g0104 a0003c0003t0001g0106 a0003c0003t0001g0111 a0003c0003t0001g0115 a0003c0003t0001g0116 a0003c0003t0001g0128 a0003c0003t0001g0133 a0003c0003t0001g0135 a0003c0003t0001g0138 a0003c0003t0001g0139 a0003c0003t0001g0256 a0003c0003t0003g0100 a0003c0029t0001g0140 a0004c0005t0001g0004 a0004c0005t0001g0080 a0004c0005t0001g0081 a0004c0005t0001g0083 a0004c0005t0001g0091 a0004c0005t0001g0095 a0004c0005t0001g0096 a0004c0005t0001g0097 a0004c0005t0001g0098 a0004c0005t0001g0121 a0004c0005t0001g0124 a0004c0005t0001g0126 a0004c0005t0001g0132 a0004c0005t0001g0141 a0004c0005t0001g0242 a0004c0005t0001g0245 a0004c0005t0001g0246 a0007c0013t0001g0122 a0007c0013t0001g0131 a0007c0013t0001g0134 a0009c0009t0002g0077 a0009c0009t0002g0108 a0009c0009t0002g0130 a0011c0015t0002g0079 a0017c0028t0001g0118 a0018c0030t0001g0137	46	149	0.3087	17	c.238 others(36): Show c.2386-2446_2386-2445insTTTTTTTTTTTTTTTTT	SPAG17	ENSG00000155761.14	transcript	ENST00000336338.10	protein_coding	17/48			chr1	TogoVar
SPAG1_chr8_100153587_100246904	100168687	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01243.hp2 HG01891.hp1 others(2): Show HG00738.hp2 HG01243.hp2 HG01891.hp1 HG03098.hp2 NA18999.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0003 a0001c0002t0001 a0001c0003t0003	a0001c0002t0001g0185 a0001c0003t0003g0101 a0001c0003t0003g0102 others(2): Show a0001c0002t0001g0185 a0001c0003t0003g0101 a0001c0003t0003g0102 a0001c0003t0003g0112 a0001c0003t0003g0198	5	116	0.0431	17	c.300 others(34): Show c.300+2725_300+2726insTTTTTTTTTTTTTTTTT	SPAG1	ENSG00000104450.13	transcript	ENST00000388798.7	protein_coding	3/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SPAG4_chr20_35610829_35626094	35615424	A A	AAAAAGAA others(10): Show AAAAAGAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp1 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	115	0.0087	17	c.-58 others(26): Show c.-580_-579insAAAAGAAAGAAAGAAAG	SPAG4	ENSG00000061656.11	transcript	ENST00000374273.8	protein_coding		404		chr20	TogoVar
SPAG4_chr20_35610829_35626094	35615424	A A	AGAAAGAA others(10): Show AGAAAGAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp2 NA18906.hp2 HG02004.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0002	a0001c0001t0001g0001 a0001c0003t0002g0020 a0001c0001t0001g0001 a0001c0003t0002g0020	2	116	0.0172	17	c.-58 others(26): Show c.-580_-579insGAAAGAAAGAAAGAAAG	SPAG4	ENSG00000061656.11	transcript	ENST00000374273.8	protein_coding		404		chr20	TogoVar
SPAG6_chr10_22340496_22422610	22411840	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0076 a0002c0002t0001g0076	1	32	0.0313	17	c.146 others(34): Show c.1460+674_1460+690dupTTTTTTTTTTTTTTTTT	SPAG6	ENSG00000077327.16	transcript	ENST00000376624.8	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
SPAG9_chr17_50957174_51125868	51037685	A A	ATATATAT others(10): Show ATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03195.hp1 HG02622.hp2 HG03195.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0008 a0002c0003t0008	a0002c0003t0008g0173 a0002c0003t0008g0287 a0002c0003t0008g0173 a0002c0003t0008g0287	2	154	0.0130	17	c.741 others(34): Show c.741+3815_741+3816insATATATATATATATATA	SPAG9	ENSG00000008294.22	transcript	ENST00000262013.12	protein_coding	5/29			chr17	TogoVar
SPAG9_chr17_50957174_51125868	51104932	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp1 HG00639.hp2 others(16): Show HG00280.hp2 HG00621.hp1 HG00639.hp2 HG00738.hp2 HG01243.hp1 HG01981.hp1 HG02622.hp2 HG02717.hp1 HG03041.hp1 HG03041.hp2 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18906.hp1 NA18974.hp1 NA18988.hp1 NA18999.hp1 NA19030.hp2 NA19063.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0003 a0001c0001 a0001c0005 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0001 a0002c0003t0007 a0002c0003t0008 a0002c0003t0011	a0001c0001t0001g0215 a0001c0001t0001g0224 a0001c0001t0001g0226 others(16): Show a0001c0001t0001g0215 a0001c0001t0001g0224 a0001c0001t0001g0226 a0001c0001t0001g0239 a0001c0001t0001g0242 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0001g0255 a0001c0001t0001g0257 a0001c0001t0001g0261 a0001c0001t0001g0266 a0001c0001t0002g0204 a0001c0005t0001g0212 a0002c0003t0007g0096 a0002c0003t0007g0102 a0002c0003t0007g0114 a0002c0003t0007g0168 a0002c0003t0008g0287 a0002c0003t0011g0195	19	217	0.0876	17	c.303 others(36): Show c.303+15421_303+15422insTTTTTTTTTTTTTTTTT	SPAG9	ENSG00000008294.22	transcript	ENST00000262013.12	protein_coding	1/29			chr17	TogoVar
SPAG9_chr17_50957174_51125868	51104932	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAG	intron_variant intron_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0241 a0001c0001t0001g0241	1	199	0.0050	17	c.303 others(36): Show c.303+15421_303+15422insCTTTTTTTTTTTTTTTT	SPAG9	ENSG00000008294.22	transcript	ENST00000262013.12	protein_coding	1/29			chr17	TogoVar
SPAST_chr2_32058556_32162637	32081781	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0149 a0001c0001t0001g0149	1	124	0.0081	17	c.416 others(34): Show c.416-5704_416-5688dupAAAAAAAAAAAAAAAAA	SPAST	ENSG00000021574.14	transcript	ENST00000315285.9	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SPAST_chr2_32058556_32162637	32083766	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0177	1	286	0.0035	17	c.416 others(34): Show c.416-3725_416-3724insTTTTTTTTTTTTTTTTT	SPAST	ENSG00000021574.14	transcript	ENST00000315285.9	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SPAST_chr2_32058556_32162637	32083770	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00735.hp1 NA18979.hp1 HG00735.hp1 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0149 a0001c0001t0001g0159 a0001c0001t0001g0149 a0001c0001t0001g0159	2	253	0.0079	17	c.416 others(34): Show c.416-3721_416-3720insTTTTTTTTTTTTTTTTT	SPAST	ENSG00000021574.14	transcript	ENST00000315285.9	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SPAST_chr2_32058556_32162637	32083772	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02129.hp1 NA18951.hp2 HG02129.hp1 NA18951.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0148 a0001c0001t0001g0135 a0001c0001t0001g0148	2	233	0.0086	17	c.416 others(34): Show c.416-3719_416-3718insTTTTTTTTTTTTTTTTT	SPAST	ENSG00000021574.14	transcript	ENST00000315285.9	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SPAST_chr2_32058556_32162637	32083774	A A	ATTTTTTT others(10): Show ATTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0176 a0001c0001t0001g0176	1	195	0.0051	17	c.416 others(34): Show c.416-3717_416-3716insTTTTTTTTTTTTTTTTT	SPAST	ENSG00000021574.14	transcript	ENST00000315285.9	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SPATA13_chr13_24155720_24312069	24190376	A A	ATTATTAT others(10): Show ATTATTATATAACATATG	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0085 a0001c0001t0020g0085	1	128	0.0078	17	c.-11 others(38): Show c.-112+29444_-112+29445insTTATTATATAACATATG	SPATA13	ENSG00000182957.16	transcript	ENST00000382108.8	protein_coding	1/12			chr13	TogoVar
SPATA16_chr3_172884357_173146235	173056705	C C	CAAAAAAA others(10): Show CAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0158 a0002c0005t0001g0158	1	72	0.0139	17	c.613 others(34): Show c.613-7628_613-7612dupTTTTTTTTTTTTTTTTT	SPATA16	ENSG00000144962.7	transcript	ENST00000351008.4	protein_coding	2/10			chr3	TogoVar
SPATA17_chr1_217626344_217876696	217703174	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18990.hp1 NA18990.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0226 a0001c0003t0003g0226	1	188	0.0053	17	c.395 others(36): Show c.395+19827_395+19828insTTTTTTTTTTTTTTTTT	SPATA17	ENSG00000162814.11	transcript	ENST00000366933.5	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
SPATA17_chr1_217626344_217876696	217712128	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0044 a0001c0002t0044	a0001c0002t0044g0091 a0001c0002t0044g0091	1	151	0.0066	17	c.395 others(36): Show c.395+28771_395+28772insTTTTTTTTTTTTTTTTT	SPATA17	ENSG00000162814.11	transcript	ENST00000366933.5	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
SPATA17_chr1_217626344_217876696	217714488	C C	CTTTTTTT others(10): Show CTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01361.hp1 HG02165.hp1 others(6): Show HG00609.hp1 HG01361.hp1 HG02165.hp1 HG02735.hp2 NA18949.hp1 NA18975.hp2 NA18990.hp1 NA19005.hp1 NA19066.hp1	a0001 a0001	a0001c0003 a0001c0008 a0001c0003 a0001c0008	a0001c0003t0001 a0001c0003t0003 a0001c0003t0031 others(1): Show a0001c0003t0001 a0001c0003t0003 a0001c0003t0031 a0001c0008t0051	a0001c0003t0001g0220 a0001c0003t0003g0098 a0001c0003t0003g0214 others(6): Show a0001c0003t0001g0220 a0001c0003t0003g0098 a0001c0003t0003g0214 a0001c0003t0003g0217 a0001c0003t0003g0223 a0001c0003t0003g0224 a0001c0003t0003g0226 a0001c0003t0031g0225 a0001c0008t0051g0234	9	193	0.0466	17	c.396 others(36): Show c.396-27473_396-27472insTTTTTTTTTTTTTTTTT	SPATA17	ENSG00000162814.11	transcript	ENST00000366933.5	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
SPATA17_chr1_217626344_217876696	217786750	T T	TTCTTCTT others(10): Show TTCTTCTTCTTCTTCTTC	intron_variant intron_variant	MODIFIER	NA18946.hp2 NA18946.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0017 a0001c0002t0017	a0001c0002t0017g0113 a0001c0002t0017g0113	1	36	0.0278	17	c.872 others(34): Show c.872+4429_872+4430insCTTCTTCTTCTTCTTCT	SPATA17	ENSG00000162814.11	transcript	ENST00000366933.5	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
SPATA18_chr4_52046304_52102299	52058298	T T	TTTTGGGA others(10): Show TTTTGGGAGGAGAGATTA	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20805.hp1 NA20752.hp1 NA20805.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0041 a0002c0002t0001g0042	2	306	0.0065	17	c.88- others(32): Show c.88-2120_88-2104dupTTTGGGAGGAGAGATTA	SPATA18	ENSG00000163071.11	transcript	ENST00000295213.9	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr4	TogoVar
SPATA21_chr1_16393643_16442424	16442161	A A	AGAGATGA others(10): Show AGAGATGAGATTTCTCCG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG01106.hp1 HG01884.hp1 others(14): Show HG00642.hp2 HG01106.hp1 HG01884.hp1 HG02257.hp2 HG02486.hp2 HG02572.hp2 HG02976.hp2 HG03041.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03471.hp1 HG03516.hp2 NA18906.hp1 NA18906.hp2 NA19240.hp2 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 others(1): Show a0001c0001 a0002c0002 a0004c0004 a0004c0007	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 others(3): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0004c0004t0001 a0004c0004t0002 a0004c0007t0001	a0001c0001t0001g0007 a0001c0001t0001g0152 a0001c0001t0001g0158 others(12): Show a0001c0001t0001g0007 a0001c0001t0001g0152 a0001c0001t0001g0158 a0001c0001t0002g0304 a0001c0001t0002g0311 a0001c0001t0002g0312 a0001c0001t0002g0313 a0002c0002t0002g0309 a0004c0004t0001g0036 a0004c0004t0001g0166 a0004c0004t0002g0305 a0004c0004t0002g0307 a0004c0004t0002g0308 a0004c0004t0002g0310 a0004c0007t0001g0169	17	350	0.0486	17	c.-52 others(28): Show c.-5221_-5220insCGGAGAAATCTCATCTC	SPATA21	ENSG00000187144.11	transcript	ENST00000335496.5	protein_coding		4738		chr1	TogoVar

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