Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TTC28_chr22_27973014_28684840	28640567	A A	AAATAATA others(11): Show AAATAATAATAATAATAAT	intron_variant intron_variant	MODIFIER	NA19056.hp2 NA19056.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0031 a0001c0002t0031	a0001c0002t0031g0130 a0001c0002t0031g0130	1	67	0.0149	18	c.103 others(37): Show c.103-10755_103-10738dupATTATTATTATTATTATT	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	1/22			chr22	TogoVar
TTC28_chr22_27973014_28684840	28670704	C C	CATATATA others(11): Show CATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01257.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0165 a0001c0003t0002g0165	1	134	0.0075	18	c.102 others(35): Show c.102+8900_102+8917dupATATATATATATATATAT	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	1/22			chr22	TogoVar
TTC29_chr4_146701617_146950864	146713111	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0286 a0002c0002t0001g0286	1	3	0.3333	18	c.133 others(37): Show c.1331-5578_1331-5561dupACACACACACACACACAC	TTC29	ENSG00000137473.19	transcript	ENST00000325106.9	protein_coding	11/12			chr4	TogoVar
TTC29_chr4_146701617_146950864	146797832	T T	TTATATAT others(11): Show TTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG04184.hp1 NA19030.hp1 others(1): Show HG03225.hp2 HG04184.hp1 NA19030.hp1 NA19030.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0001c0001t0001 a0002c0002t0001 a0003c0003t0001	a0001c0001t0001g0059 a0002c0002t0001g0202 a0002c0002t0001g0234 others(1): Show a0001c0001t0001g0059 a0002c0002t0001g0202 a0002c0002t0001g0234 a0003c0003t0001g0075	4	54	0.0741	18	c.133 others(37): Show c.1330+5607_1330+5624dupTATATATATATATATATA	TTC29	ENSG00000137473.19	transcript	ENST00000325106.9	protein_coding	11/12			chr4	TogoVar
TTC29_chr4_146701617_146950864	146857277	A A	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA18968.hp1 NA18968.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0089 a0003c0004t0001g0089	1	109	0.0092	18	c.885 others(37): Show c.885+10203_885+10220dupACACACACACACACACAC	TTC29	ENSG00000137473.19	transcript	ENST00000325106.9	protein_coding	8/12			chr4	TogoVar
TTC29_chr4_146701617_146950864	146930084	C C	CATATATA others(11): Show CATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0131	1	115	0.0087	18	c.176 others(35): Show c.176+7492_176+7509dupATATATATATATATATAT	TTC29	ENSG00000137473.19	transcript	ENST00000325106.9	protein_coding	4/12			chr4	TogoVar
TTC29_chr4_146701617_146950864	146930118	T T	TATATATA others(11): Show TATATATATATATATATAC	intron_variant intron_variant	MODIFIER	NA19077.hp2 NA19077.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0053 a0003c0003t0002g0053	1	220	0.0045	18	c.176 others(35): Show c.176+7475_176+7476insGTATATATATATATATAT	TTC29	ENSG00000137473.19	transcript	ENST00000325106.9	protein_coding	4/12			chr4	TogoVar
TTC33_chr5_40706576_40760961	40738567	T T	TAAAATAA others(11): Show TAAAATAAAATAAAATAAA	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0121 a0001c0001t0002g0121	1	289	0.0035	18	c.222 others(35): Show c.222-8225_222-8224insTTTATTTTATTTTATTTT	TTC33	ENSG00000113638.14	transcript	ENST00000337702.5	protein_coding	2/4			chr5	TogoVar
TTC33_chr5_40706576_40760961	40754585	A A	AAGGCCTG others(11): Show AAGGCCTGCACTACTGTAT	intron_variant intron_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0052	1	392	0.0026	18	c.-2+ others(33): Show c.-2+1238_-2+1239insATACAGTAGTGCAGGCCT	TTC33	ENSG00000113638.14	transcript	ENST00000337702.5	protein_coding	1/4			chr5	TogoVar
TTC39B_chr9_15158622_15312216	15167028	A A	ATATATAT others(11): Show ATATATATATATATTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00558.hp2 HG03017.hp2 HG00558.hp2 HG03017.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0103 a0001c0001t0003g0112 a0001c0001t0001g0103 a0001c0001t0003g0112	2	24	0.0833	18	c.49 others(29): Show c.4990_*4991insAAAAAATATATATATATA	TTC39B	ENSG00000155158.20	transcript	ENST00000512701.7	protein_coding	20/20	4990		chr9	TogoVar
TTC39B_chr9_15158622_15312216	15167028	A A	ATATATAT others(11): Show ATATATATATATTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00673.hp2 HG00673.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0034 a0001c0001t0001g0034	1	23	0.0435	18	c.49 others(29): Show c.4990_*4991insAAAAAAAATATATATATA	TTC39B	ENSG00000155158.20	transcript	ENST00000512701.7	protein_coding	20/20	4990		chr9	TogoVar
TTC39B_chr9_15158622_15312216	15167028	A A	ATATATAT others(11): Show ATATATATATTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0099 a0001c0001t0022g0099	1	23	0.0435	18	c.49 others(29): Show c.4990_*4991insAAAAAAAAAATATATATA	TTC39B	ENSG00000155158.20	transcript	ENST00000512701.7	protein_coding	20/20	4990		chr9	TogoVar
TTC39B_chr9_15158622_15312216	15167028	A A	ATATATTT others(11): Show ATATATTTTTTTTTTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19004.hp1 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0053 a0001c0001t0002g0053	1	23	0.0435	18	c.49 others(29): Show c.4990_*4991insAAAAAAAAAAAAAATATA	TTC39B	ENSG00000155158.20	transcript	ENST00000512701.7	protein_coding	20/20	4990		chr9	TogoVar
TTC39B_chr9_15158622_15312216	15218635	A A	AAAATATA others(11): Show AAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01884.hp1 HG01981.hp2 HG00099.hp2 HG01884.hp1 HG01981.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0097 a0002c0002t0004 a0002c0002t0037 a0001c0001t0097 a0002c0002t0004 a0002c0002t0037	a0001c0001t0097g0209 a0002c0002t0004g0098 a0002c0002t0037g0159 a0001c0001t0097g0209 a0002c0002t0004g0098 a0002c0002t0037g0159	3	184	0.0163	18	c.174 others(35): Show c.174-4387_174-4386insATATATATATATATATTT	TTC39B	ENSG00000155158.20	transcript	ENST00000512701.7	protein_coding	3/19			chr9	TogoVar
TTC39B_chr9_15158622_15312216	15251700	C C	CATATATA others(11): Show CATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02129.hp1 HG02155.hp2 others(2): Show HG01884.hp2 HG02129.hp1 HG02155.hp2 HG02602.hp2 NA18983.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0001 a0001c0001t0016 a0001c0004t0009 others(1): Show a0001c0001t0001 a0001c0001t0016 a0001c0004t0009 a0002c0002t0101	a0001c0001t0001g0089 a0001c0001t0001g0095 a0001c0001t0016g0076 others(2): Show a0001c0001t0001g0089 a0001c0001t0001g0095 a0001c0001t0016g0076 a0001c0004t0009g0137 a0002c0002t0101g0042	5	24	0.2083	18	c.77+ others(35): Show c.77+16196_77+16213dupATATATATATATATATAT	TTC39B	ENSG00000155158.20	transcript	ENST00000512701.7	protein_coding	2/19			chr9	TogoVar
TTC39B_chr9_15158622_15312216	15311306	T T	TATATATA others(11): Show TATATATATATGTATATAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	222	0.0045	18	c.-41 others(29): Show c.-4182_-4181insGTATATACATATATATAT	TTC39B	ENSG00000155158.20	transcript	ENST00000512701.7	protein_coding		4091		chr9	TogoVar
TTC39C_chr18_24009754_24140600	24014226	G G	GGTTTCAG others(11): Show GGTTTCAGTTACTCGTGGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18990.hp2 NA19004.hp1 NA18990.hp2 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0061 a0001c0001t0006g0096 a0001c0001t0001g0061 a0001c0001t0006g0096	2	326	0.0061	18	c.-64 others(27): Show c.-646_-645insGTTTCAGTTACTCGTGGA	TTC39C	ENSG00000168234.13	transcript	ENST00000317571.8	protein_coding		527		chr18	TogoVar
TTC39C_chr18_24009754_24140600	24045903	A A	ATATATGT others(11): Show ATATATGTATATGTATATG	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00438.hp2 HG00735.hp2 others(28): Show HG00423.hp2 HG00438.hp2 HG00735.hp2 HG01071.hp2 HG01257.hp1 HG01978.hp2 HG01993.hp1 HG02083.hp1 HG02258.hp1 HG02258.hp2 HG02523.hp1 HG02683.hp1 HG02976.hp2 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03540.hp2 HG03942.hp2 NA18943.hp1 NA18945.hp1 NA18957.hp1 NA18964.hp1 NA18983.hp2 NA18985.hp1 NA19005.hp1 NA19011.hp1 NA19058.hp1 NA19060.hp2 NA19066.hp2 NA19084.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0021 a0001c0001t0022	a0001c0001t0001g0310 a0001c0001t0002g0044 a0001c0001t0002g0071 others(28): Show a0001c0001t0001g0310 a0001c0001t0002g0044 a0001c0001t0002g0071 a0001c0001t0003g0073 a0001c0001t0003g0133 a0001c0001t0003g0177 a0001c0001t0003g0311 a0001c0001t0005g0161 a0001c0001t0005g0247 a0001c0001t0006g0180 a0001c0001t0006g0188 a0001c0001t0006g0296 a0001c0001t0006g0319 a0001c0001t0007g0078 a0001c0001t0007g0323 a0001c0001t0008g0045 a0001c0001t0009g0089 a0001c0001t0011g0074 a0001c0001t0011g0176 a0001c0001t0011g0191 a0001c0001t0011g0194 a0001c0001t0011g0248 a0001c0001t0012g0064 a0001c0001t0012g0165 a0001c0001t0012g0178 a0001c0001t0012g0264 a0001c0001t0012g0274 a0001c0001t0014g0117 a0001c0001t0014g0121 a0001c0001t0021g0172 a0001c0001t0022g0037	31	326	0.0951	18	c.168 others(37): Show c.168-18232_168-18231insGTATATGTATATGTATAT	TTC39C	ENSG00000168234.13	transcript	ENST00000317571.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr18	TogoVar
TTC39C_chr18_24009754_24140600	24045906	T T	TATATATA others(11): Show TATATATATGTATATGTAC	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0003 a0001c0001t0015g0003	1	326	0.0031	18	c.168 others(37): Show c.168-18226_168-18225insGTATATGTACATATATAT	TTC39C	ENSG00000168234.13	transcript	ENST00000317571.8	protein_coding	1/13		INFO_REALIGN_3_PRIME	chr18	TogoVar
TTC39C_chr18_24009754_24140600	24104688	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02074.hp1 HG02155.hp2 others(5): Show HG00621.hp2 HG02074.hp1 HG02155.hp2 NA18985.hp2 NA19002.hp1 NA19007.hp2 NA19058.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0008 a0001c0001t0005 a0001c0001t0008	a0001c0001t0005g0036 a0001c0001t0005g0152 a0001c0001t0005g0232 others(5): Show a0001c0001t0005g0036 a0001c0001t0005g0152 a0001c0001t0005g0232 a0001c0001t0005g0247 a0001c0001t0005g0251 a0001c0001t0005g0289 a0001c0001t0008g0034 a0001c0001t0008g0269	8	116	0.0690	18	c.985 others(35): Show c.985-9849_985-9832dupTGTGTGTGTGTGTGTGTG	TTC39C	ENSG00000168234.13	transcript	ENST00000317571.8	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr18	TogoVar
TTC39C_chr18_24009754_24140600	24109176	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02572.hp2 HG02615.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0015 a0001c0001t0004g0118 a0001c0001t0004g0119 a0001c0001t0003g0015 a0001c0001t0004g0118 a0001c0001t0004g0119	3	25	0.1200	18	c.985 others(35): Show c.985-5373_985-5356dupAAAAAAAAAAAAAAAAAA	TTC39C	ENSG00000168234.13	transcript	ENST00000317571.8	protein_coding	6/13		INFO_REALIGN_3_PRIME	chr18	TogoVar
TTC3_chr21_37068254_37208107	37073315	G G	GGCTGCTG others(11): Show GGCTGCTGCTGCTGCGGCT	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0014 a0002c0002t0014	a0002c0002t0014g0153 a0002c0002t0014g0153	1	193	0.0052	18	c.-15 others(27): Show c.-156_-155insGGCTGCTGCTGCTGCTGC	TTC3	ENSG00000182670.14	transcript	ENST00000418766.6	protein_coding	1/46	13928	INFO_REALIGN_3_PRIME	chr21	TogoVar
TTC3_chr21_37068254_37208107	37095137	A A	ATGTGTGT others(11): Show ATGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00738.hp1 HG01071.hp1 others(17): Show HG00735.hp1 HG00738.hp1 HG01071.hp1 HG01123.hp1 HG01255.hp1 HG01361.hp1 HG01433.hp1 HG01516.hp2 HG01934.hp2 HG01943.hp1 HG01952.hp2 HG02129.hp1 HG02451.hp2 HG02735.hp1 NA18948.hp2 NA18956.hp1 NA18962.hp1 NA19006.hp2 NA19062.hp2 NA19091.hp1	a0002 a0003 a0014 a0002 a0003 a0014	a0002c0002 a0003c0003 a0003c0016 others(1): Show a0002c0002 a0003c0003 a0003c0016 a0014c0015	a0002c0002t0001 a0002c0002t0014 a0002c0002t0019 others(3): Show a0002c0002t0001 a0002c0002t0014 a0002c0002t0019 a0003c0003t0001 a0003c0016t0001 a0014c0015t0001	a0002c0002t0001g0139 a0002c0002t0001g0149 a0002c0002t0001g0150 others(17): Show a0002c0002t0001g0139 a0002c0002t0001g0149 a0002c0002t0001g0150 a0002c0002t0001g0151 a0002c0002t0001g0152 a0002c0002t0001g0161 a0002c0002t0001g0162 a0002c0002t0001g0163 a0002c0002t0001g0176 a0002c0002t0001g0177 a0002c0002t0001g0178 a0002c0002t0001g0190 a0002c0002t0001g0304 a0002c0002t0001g0305 a0002c0002t0014g0153 a0002c0002t0019g0214 a0003c0003t0001g0223 a0003c0003t0001g0224 a0003c0016t0001g0241 a0014c0015t0001g0164	20	134	0.1493	18	c.688 others(33): Show c.688-203_688-186dupGTGTGTGTGTGTGTGTGT	TTC3	ENSG00000182670.14	transcript	ENST00000418766.6	protein_coding	8/45		INFO_REALIGN_3_PRIME	chr21	TogoVar
TTC3_chr21_37068254_37208107	37104588	C C	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01978.hp1 HG04199.hp1 HG01243.hp1 HG01978.hp1 HG04199.hp1	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0006 a0008c0009t0006	a0008c0009t0006g0263 a0008c0009t0006g0264 a0008c0009t0006g0265 a0008c0009t0006g0263 a0008c0009t0006g0264 a0008c0009t0006g0265	3	119	0.0252	18	c.846 others(35): Show c.846-3800_846-3783dupAAAAAAAAAAAAAAAAAA	TTC3	ENSG00000182670.14	transcript	ENST00000418766.6	protein_coding	10/45		INFO_REALIGN_3_PRIME	chr21	TogoVar
TTC3_chr21_37068254_37208107	37115174	T T	TATAATAA others(11): Show TATAATAATAATAATAATA	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00741.hp2 HG01243.hp2 others(9): Show HG00639.hp2 HG00741.hp2 HG01243.hp2 HG01257.hp1 HG01258.hp1 HG02145.hp2 HG02451.hp1 HG02647.hp2 HG02976.hp2 HG03139.hp1 HG03540.hp2 HG06807.hp2	a0001 a0003 a0001 a0003	a0001c0004 a0003c0003 a0001c0004 a0003c0003	a0001c0004t0003 a0001c0004t0015 a0003c0003t0011 a0001c0004t0003 a0001c0004t0015 a0003c0003t0011	a0001c0004t0003g0288 a0001c0004t0003g0289 a0001c0004t0003g0290 others(9): Show a0001c0004t0003g0288 a0001c0004t0003g0289 a0001c0004t0003g0290 a0001c0004t0003g0291 a0001c0004t0003g0293 a0001c0004t0003g0295 a0001c0004t0003g0296 a0001c0004t0003g0297 a0001c0004t0003g0298 a0001c0004t0003g0300 a0001c0004t0015g0294 a0003c0003t0011g0253	12	20	0.6000	18	c.901 others(35): Show c.901-6632_901-6615dupTAATAATAATAATAATAA	TTC3	ENSG00000182670.14	transcript	ENST00000418766.6	protein_coding	11/45		INFO_REALIGN_3_PRIME	chr21	TogoVar
TTC3_chr21_37068254_37208107	37124112	C C	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01516.hp1 HG03490.hp2 HG01169.hp2 HG01516.hp1 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0035 a0001c0001t0002g0046 a0001c0001t0002g0103 a0001c0001t0002g0035 a0001c0001t0002g0046 a0001c0001t0002g0103	3	167	0.0180	18	c.111 others(35): Show c.1110-501_1110-484dupTTTTTTTTTTTTTTTTTT	TTC3	ENSG00000182670.14	transcript	ENST00000418766.6	protein_coding	13/45		INFO_REALIGN_3_PRIME	chr21	TogoVar
TTC3_chr21_37068254_37208107	37192491	T T	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00741.hp1 HG01975.hp2 others(15): Show HG00639.hp1 HG00741.hp1 HG01975.hp2 HG02630.hp2 HG02647.hp1 HG02896.hp1 HG02922.hp2 HG03041.hp2 HG03486.hp1 HG03486.hp2 HG03579.hp1 HG03579.hp2 NA18955.hp2 NA18969.hp2 NA19030.hp1 NA19075.hp2 NA19240.hp1 NA20129.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0004 a0001c0005 others(2): Show a0001c0001 a0001c0004 a0001c0005 a0001c0021 a0004c0006	a0001c0001t0002 a0001c0004t0010 a0001c0005t0002 others(3): Show a0001c0001t0002 a0001c0004t0010 a0001c0005t0002 a0001c0005t0004 a0001c0021t0002 a0004c0006t0005	a0001c0001t0002g0040 a0001c0001t0002g0048 a0001c0001t0002g0083 others(15): Show a0001c0001t0002g0040 a0001c0001t0002g0048 a0001c0001t0002g0083 a0001c0001t0002g0086 a0001c0001t0002g0094 a0001c0001t0002g0107 a0001c0001t0002g0118 a0001c0004t0010g0272 a0001c0005t0002g0033 a0001c0005t0004g0309 a0001c0005t0004g0334 a0001c0005t0004g0335 a0001c0005t0004g0336 a0001c0021t0002g0097 a0004c0006t0005g0277 a0004c0006t0005g0278 a0004c0006t0005g0284 a0004c0006t0005g0285	18	86	0.2093	18	c.521 others(35): Show c.5217+294_5217+311dupGTGTGTGTGTGTGTGTGT	TTC3	ENSG00000182670.14	transcript	ENST00000418766.6	protein_coding	41/45		INFO_REALIGN_3_PRIME	chr21	TogoVar
TTC4_chr1_54710861_54747657	54744228	C C	CCACACAC others(11): Show CCACACACACACACACACA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0008 a0002c0002t0002g0008	1	23	0.0435	18	c.27 others(29): Show c.2715_*2716insCACACACACACACACACA	TTC4	ENSG00000243725.7	transcript	ENST00000371281.4	protein_coding		1572		chr1	TogoVar
TTC5_chr14_20281227_20310951	20300143	G G	GTATATAT others(11): Show GTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0209 a0001c0002t0008g0209	1	94	0.0106	18	c.396 others(33): Show c.396+463_396+464insTATATATATATATATATA	TTC5	ENSG00000136319.12	transcript	ENST00000258821.8	protein_coding	3/9			chr14	TogoVar
TTC5_chr14_20281227_20310951	20300143	G G	GTATGTGT others(11): Show GTATGTGTGTGTATATATA	intron_variant intron_variant	MODIFIER	HG00280.hp1 NA18906.hp1 HG00280.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0058 a0001c0001t0001 a0001c0002t0058	a0001c0001t0001g0100 a0001c0002t0058g0218 a0001c0001t0001g0100 a0001c0002t0058g0218	2	95	0.0211	18	c.396 others(33): Show c.396+463_396+464insTATATATACACACACATA	TTC5	ENSG00000136319.12	transcript	ENST00000258821.8	protein_coding	3/9			chr14	TogoVar
TTC6_chr14_37590629_37847717	37721847	C C	CATATATA others(11): Show CATATATACATATATATAT	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0086 a0003c0003t0001g0086	1	33	0.0303	18	c.171 others(37): Show c.1714-3044_1714-3043insCATATATATATATATATA	TTC6	ENSG00000139865.17	transcript	ENST00000553443.6	protein_coding	8/32		INFO_REALIGN_3_PRIME	chr14	TogoVar
TTC6_chr14_37590629_37847717	37789596	T T	TTATATAT others(11): Show TTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0138	1	9	0.1111	18	c.343 others(37): Show c.3437-1117_3437-1100dupATATATATATATATATAT	TTC6	ENSG00000139865.17	transcript	ENST00000553443.6	protein_coding	17/32		INFO_REALIGN_3_PRIME	chr14	TogoVar
TTC7A_chr2_46936224_47081123	46987809	C C	CGTGTGTG others(11): Show CGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0004 a0001c0015t0004	a0001c0015t0004g0193 a0001c0015t0004g0193	1	192	0.0052	18	c.765 others(35): Show c.765-5624_765-5607dupGTGTGTGTGTGTGTGTGT	TTC7A	ENSG00000068724.18	transcript	ENST00000319190.11	protein_coding	5/19		INFO_REALIGN_3_PRIME	chr2	TogoVar
TTC7B_chr14_90519564_90821430	90573384	T T	TCCCTCTC others(11): Show TCCCTCTCCGGCTCACAGG	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00733.hp2 HG01106.hp1 others(29): Show HG00099.hp2 HG00733.hp2 HG01106.hp1 HG01243.hp2 HG01261.hp2 HG01934.hp2 HG01993.hp2 HG02165.hp1 HG02630.hp1 HG02647.hp2 HG03688.hp1 HG03704.hp2 HG03834.hp1 HG04184.hp1 HG04228.hp1 NA18941.hp2 NA18944.hp2 NA18946.hp1 NA18947.hp1 NA18952.hp1 NA18957.hp2 NA18966.hp2 NA18967.hp1 NA19002.hp1 NA19005.hp1 NA19012.hp2 NA19066.hp2 NA19074.hp1 NA19082.hp1 NA20129.hp2 NA20805.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0013 a0001c0001t0042 a0001c0001t0052 a0001c0001t0054 a0001c0001t0077 a0001c0001t0088 a0001c0002t0001 a0001c0002t0006 a0001c0002t0057 a0001c0003t0001 a0001c0003t0040 a0001c0003t0041 a0001c0003t0046 a0001c0003t0068 a0001c0003t0095 a0001c0005t0001 a0001c0005t0055 a0001c0006t0001 a0001c0007t0034 a0001c0009t0109 a0001c0015t0108	a0001c0001t0001g0060 a0001c0001t0001g0198 a0001c0001t0002g0187 others(28): Show a0001c0001t0001g0060 a0001c0001t0001g0198 a0001c0001t0002g0187 a0001c0001t0003g0001 a0001c0001t0013g0031 a0001c0001t0042g0178 a0001c0001t0052g0015 a0001c0001t0054g0018 a0001c0001t0077g0061 a0001c0001t0088g0054 a0001c0002t0001g0047 a0001c0002t0001g0049 a0001c0002t0001g0074 a0001c0002t0001g0104 a0001c0002t0001g0105 a0001c0002t0001g0108 a0001c0002t0006g0098 a0001c0002t0057g0134 a0001c0003t0001g0032 a0001c0003t0040g0159 a0001c0003t0041g0013 a0001c0003t0046g0058 a0001c0003t0068g0168 a0001c0003t0095g0129 a0001c0005t0001g0026 a0001c0005t0001g0057 a0001c0005t0055g0068 a0001c0006t0001g0006 a0001c0007t0034g0042 a0001c0009t0109g0163 a0001c0015t0108g0146	32	198	0.1616	18	c.231 others(37): Show c.2310+4704_2310+4721dupCCTGTGAGCCGGAGAGGG	TTC7B	ENSG00000165914.15	transcript	ENST00000328459.11	protein_coding	19/19			chr14	TogoVar
TTC7B_chr14_90519564_90821430	90701709	T T	TATATATA others(11): Show TATATATACACACACACAC	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0019 a0001c0003t0019	a0001c0003t0019g0162 a0001c0003t0019g0162	1	197	0.0051	18	c.699 others(35): Show c.699-6132_699-6131insGTGTGTGTGTGTATATAT	TTC7B	ENSG00000165914.15	transcript	ENST00000328459.11	protein_coding	5/19			chr14	TogoVar
TTC7B_chr14_90519564_90821430	90776140	G G	GACACACA others(11): Show GACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02280.hp1 HG02055.hp2 HG02280.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0061 a0001c0009t0104 a0001c0009t0061 a0001c0009t0104	a0001c0009t0061g0167 a0001c0009t0104g0072 a0001c0009t0061g0167 a0001c0009t0104g0072	2	71	0.0282	18	c.445 others(35): Show c.445+4580_445+4597dupGTGTGTGTGTGTGTGTGT	TTC7B	ENSG00000165914.15	transcript	ENST00000328459.11	protein_coding	3/19			chr14	TogoVar
TTC8_chr14_88819651_88882988	88862541	C C	CATATATA others(11): Show CATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18947.hp1 NA18961.hp1 NA18947.hp1 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0085 a0001c0001t0001g0095 a0001c0001t0001g0085 a0001c0001t0001g0095	2	43	0.0465	18	c.909 others(35): Show c.909+1248_909+1265dupATATATATATATATATAT	TTC8	ENSG00000165533.19	transcript	ENST00000380656.7	protein_coding	10/14		INFO_REALIGN_3_PRIME	chr14	TogoVar
TTC9B_chr19_40211058_40223384	40215489	G G	GGGGAGGG others(11): Show GGGGAGGGTGGGCAGGGAT	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	416	0.0024	18	c.65 others(27): Show c.656_*673dupATCCCTGCCCACCCTCCC	TTC9B	ENSG00000174521.8	transcript	ENST00000311308.7	protein_coding		568		chr19	TogoVar
TTC9_chr14_70636916_70680366	70659132	G G	GCGCGCAC others(11): Show GCGCGCACACACACACACA	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02040.hp2 HG02155.hp2 others(4): Show HG01081.hp2 HG02040.hp2 HG02155.hp2 HG03942.hp2 NA19062.hp1 NA19078.hp1 NA19086.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0009 a0001c0001t0024 others(3): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0024 a0001c0001t0036 a0001c0001t0063 a0003c0004t0004	a0001c0001t0001g0327 a0001c0001t0001g0354 a0001c0001t0009g0326 others(4): Show a0001c0001t0001g0327 a0001c0001t0001g0354 a0001c0001t0009g0326 a0001c0001t0024g0240 a0001c0001t0036g0303 a0001c0001t0063g0311 a0003c0004t0004g0328	7	141	0.0496	18	c.407 others(35): Show c.407-8431_407-8430insGCGCACACACACACACAC	TTC9	ENSG00000133985.3	transcript	ENST00000256367.3	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr14	TogoVar
TTF2_chr1_117055326_117112453	117089260	C C	CTATATAT others(11): Show CTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01891.hp2 HG02132.hp2 others(7): Show HG00408.hp2 HG01891.hp2 HG02132.hp2 HG02258.hp2 HG02717.hp1 HG02895.hp1 HG02897.hp2 HG03098.hp1 HG03130.hp2 NA18522.hp1	a0001 a0008 a0015 a0001 a0008 a0015	a0001c0002 a0001c0004 a0001c0007 others(2): Show a0001c0002 a0001c0004 a0001c0007 a0008c0011 a0015c0019	a0001c0002t0001 a0001c0002t0008 a0001c0002t0050 others(5): Show a0001c0002t0001 a0001c0002t0008 a0001c0002t0050 a0001c0004t0001 a0001c0004t0015 a0001c0007t0003 a0008c0011t0011 a0015c0019t0008	a0001c0002t0001g0182 a0001c0002t0001g0186 a0001c0002t0008g0169 others(7): Show a0001c0002t0001g0182 a0001c0002t0001g0186 a0001c0002t0008g0169 a0001c0002t0050g0178 a0001c0004t0001g0170 a0001c0004t0015g0164 a0001c0007t0003g0160 a0001c0007t0003g0172 a0008c0011t0011g0040 a0015c0019t0008g0171	10	74	0.1351	18	c.234 others(35): Show c.2342+295_2342+296insATATATATATATATATAT	TTF2	ENSG00000116830.12	transcript	ENST00000369466.9	protein_coding	13/22		INFO_REALIGN_3_PRIME	chr1	TogoVar
TTI1_chr20_37978021_38038456	38020317	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0218 a0001c0001t0001g0218	1	384	0.0026	18	c.-41 others(35): Show c.-41-6461_-41-6460insATATATATATATATATAT	TTI1	ENSG00000101407.13	transcript	ENST00000373447.8	protein_coding	1/7			chr20	TogoVar
TTI1_chr20_37978021_38038456	38020319	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG03098.hp1 HG03098.hp2 HG02698.hp2 HG03098.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0239 a0001c0001t0001g0242 a0001c0001t0001g0046 a0001c0001t0001g0239 a0001c0001t0001g0242	3	369	0.0081	18	c.-41 others(35): Show c.-41-6463_-41-6462insATATATATATATATATAT	TTI1	ENSG00000101407.13	transcript	ENST00000373447.8	protein_coding	1/7			chr20	TogoVar
TTI1_chr20_37978021_38038456	38020321	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02698.hp1 HG03834.hp1 HG00741.hp2 HG02698.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0232 a0001c0001t0001g0266 a0001c0001t0001g0040 a0001c0001t0001g0232 a0001c0001t0001g0266	3	343	0.0087	18	c.-41 others(35): Show c.-41-6465_-41-6464insATATATATATATATATAT	TTI1	ENSG00000101407.13	transcript	ENST00000373447.8	protein_coding	1/7			chr20	TogoVar
TTI1_chr20_37978021_38038456	38020323	A A	AAAAAATA others(11): Show AAAAAATATATATATATAT	intron_variant intron_variant	MODIFIER	NA19002.hp1 NA19002.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0031 a0001c0001t0004g0031	1	153	0.0065	18	c.-41 others(35): Show c.-41-6467_-41-6466insATATATATATATATTTTT	TTI1	ENSG00000101407.13	transcript	ENST00000373447.8	protein_coding	1/7			chr20	TogoVar
TTI1_chr20_37978021_38038456	38020323	A A	AAAATATA others(11): Show AAAATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01258.hp2 NA18973.hp2 HG00558.hp1 HG01258.hp2 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0195 a0001c0001t0001g0245 a0001c0001t0001g0004 a0001c0001t0001g0195 a0001c0001t0001g0245	3	155	0.0194	18	c.-41 others(35): Show c.-41-6467_-41-6466insATATATATATATATATTT	TTI1	ENSG00000101407.13	transcript	ENST00000373447.8	protein_coding	1/7			chr20	TogoVar
TTI1_chr20_37978021_38038456	38020323	A A	AATATATA others(11): Show AATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03942.hp2 NA18943.hp2 NA18961.hp1 HG03942.hp2 NA18943.hp2 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0015 a0001c0001 a0001c0015	a0001c0001t0001 a0001c0015t0001 a0001c0001t0001 a0001c0015t0001	a0001c0001t0001g0003 a0001c0001t0001g0227 a0001c0015t0001g0256 a0001c0001t0001g0003 a0001c0001t0001g0227 a0001c0015t0001g0256	3	155	0.0194	18	c.-41 others(35): Show c.-41-6484_-41-6467dupATATATATATATATATAT	TTI1	ENSG00000101407.13	transcript	ENST00000373447.8	protein_coding	1/7			chr20	TogoVar
TTI1_chr20_37978021_38038456	38030528	A A	AACACACA others(11): Show AACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02572.hp2 HG03041.hp1 others(1): Show HG02486.hp2 HG02572.hp2 HG03041.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0016 a0001c0001t0005g0271 a0001c0001t0005g0016 a0001c0001t0005g0271	4	247	0.0162	18	c.-42 others(35): Show c.-42+2858_-42+2875dupGTGTGTGTGTGTGTGTGT	TTI1	ENSG00000101407.13	transcript	ENST00000373447.8	protein_coding	1/7			chr20	TogoVar
TTI2_chr8_33493722_33518135	33509454	T T	TTAAAAAA others(11): Show TTAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	NA18990.hp2 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0198 a0001c0001t0001g0198	1	396	0.0025	18	c.834 others(33): Show c.834+291_834+292insTTTTTTTTTTTTTTTTTA	TTI2	ENSG00000129696.13	transcript	ENST00000431156.7	protein_coding	3/7			chr8	TogoVar
TTK_chr6_79999649_80047527	80000110	G G	GAGAGATA others(11): Show GAGAGATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18991.hp1 NA19006.hp1 NA19011.hp2 NA18991.hp1 NA19006.hp1 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0116 a0001c0001t0001g0118 a0001c0001t0001g0003 a0001c0001t0001g0116 a0001c0001t0001g0118	3	262	0.0115	18	c.-46 others(29): Show c.-4606_-4605insAGAGATATATATATATAT	TTK	ENSG00000112742.10	transcript	ENST00000369798.7	protein_coding		4538		chr6	TogoVar
TTK_chr6_79999649_80047527	80000110	G G	GAGATATA others(11): Show GAGATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18973.hp1 NA18973.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	260	0.0038	18	c.-46 others(29): Show c.-4606_-4605insAGATATATATATATATAT	TTK	ENSG00000112742.10	transcript	ENST00000369798.7	protein_coding		4538		chr6	TogoVar

Search by Variant

Search

Search Results