Joint Open Genome and Omics Platform (JoGo)

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Regionname

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

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No_samplehapid

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LCK_chr1_32246265_32291165	32272623	A A	AAGAGAGA others(13): Show AAGAGAGAGAGAGAGAGAAAG	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp2 HG02809.hp1 others(9): Show HG02280.hp1 HG02280.hp2 HG02809.hp1 HG02970.hp1 HG02970.hp2 HG03139.hp1 HG03239.hp2 HG03927.hp1 HG03927.hp2 HG04228.hp2 NA18950.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0014 a0001c0001t0001g0032 a0001c0001t0001g0043 others(9): Show a0001c0001t0001g0014 a0001c0001t0001g0032 a0001c0001t0001g0043 a0001c0001t0001g0049 a0001c0001t0001g0064 a0001c0001t0001g0093 a0001c0001t0001g0097 a0001c0001t0001g0127 a0001c0001t0001g0133 a0001c0001t0001g0234 a0001c0001t0001g0260 a0001c0001t0001g0262	12	274	0.0438	20	c.-5- others(35): Show c.-5-1685_-5-1684insAAGAGAGAGAGAGAGAGAGA	LCK	ENSG00000182866.18	transcript	ENST00000336890.10	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr1	TogoVar
LCLAT1_chr2_30442246_30649225	30461770	C C	CCTTTTTT others(13): Show CCTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18994.hp1 NA19062.hp2 NA19082.hp1 NA18994.hp1 NA19062.hp2 NA19082.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0025 a0002c0002t0036 a0002c0002t0038 a0002c0002t0025 a0002c0002t0036 a0002c0002t0038	a0002c0002t0025g0038 a0002c0002t0036g0037 a0002c0002t0038g0036 a0002c0002t0025g0038 a0002c0002t0036g0037 a0002c0002t0038g0036	3	366	0.0082	20	c.-5+ others(37): Show c.-5+14387_-5+14388insCTTTTTTTTTTTTTTTTTTT	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5			chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30466229	T T	TTTTTCTT others(13): Show TTTTTCTTTTCTTTTCTTTTC	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0058 a0002c0002t0002g0058	1	366	0.0027	20	c.-5+ others(37): Show c.-5+18850_-5+18869dupTCTTTTCTTTTCTTTTCTTT	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
LCLAT1_chr2_30442246_30649225	30643121	T T	TCACCTCA others(13): Show TCACCTCACCTCACCGCACCG	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00438.hp1 others(135): Show HG00280.hp1 HG00408.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00609.hp1 HG00673.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01261.hp2 HG01358.hp2 HG01361.hp1 HG01928.hp2 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp2 HG02080.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp2 HG02148.hp1 HG02155.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02523.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02895.hp1 HG02976.hp2 HG03130.hp2 HG03225.hp1 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp2 HG03927.hp2 HG04184.hp1 HG04199.hp2 HG04228.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18945.hp2 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp2 NA18965.hp1 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18979.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA18995.hp2 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19043.hp2 NA19056.hp1 NA19057.hp2 NA19060.hp2 NA19062.hp1 NA19068.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp2 NA19080.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA20300.hp2 NA20905.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0008 a0002c0002 others(1): Show a0001c0001 a0001c0008 a0002c0002 a0003c0004	a0001c0001t0001 a0001c0001t0007 a0001c0001t0011 others(17): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0011 a0001c0001t0013 a0001c0001t0026 a0001c0001t0028 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0052 a0001c0001t0054 a0001c0001t0055 a0001c0001t0056 a0001c0001t0058 a0001c0001t0059 a0001c0001t0068 a0001c0008t0067 a0002c0002t0023 a0002c0002t0033 a0003c0004t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0129 others(135): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0232 a0001c0001t0001g0254 a0001c0001t0001g0257 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0314 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0328 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0333 a0001c0001t0001g0343 a0001c0001t0001g0349 a0001c0001t0001g0350 a0001c0001t0007g0016 a0001c0001t0007g0018 a0001c0001t0007g0019 a0001c0001t0007g0020 a0001c0001t0007g0021 a0001c0001t0007g0022 a0001c0001t0007g0023 a0001c0001t0007g0024 a0001c0001t0007g0025 a0001c0001t0007g0026 a0001c0001t0011g0323 a0001c0001t0011g0324 a0001c0001t0011g0325 a0001c0001t0011g0326 a0001c0001t0011g0327 a0001c0001t0011g0332 a0001c0001t0013g0185 a0001c0001t0013g0198 a0001c0001t0013g0199 a0001c0001t0013g0296 a0001c0001t0026g0013 a0001c0001t0026g0345 a0001c0001t0028g0305 a0001c0001t0028g0306 a0001c0001t0048g0363 a0001c0001t0049g0364 a0001c0001t0050g0156 a0001c0001t0052g0204 a0001c0001t0054g0197 a0001c0001t0055g0153 a0001c0001t0056g0307 a0001c0001t0058g0299 a0001c0001t0059g0131 a0001c0001t0068g0322 a0001c0008t0067g0205 a0002c0002t0023g0043 a0002c0002t0023g0084 a0002c0002t0033g0080 a0003c0004t0001g0178 a0003c0004t0001g0315	138	366	0.3771	20	c.25 others(31): Show c.2505_*2506insCTCACCTCACCGCACCGCAC	LCLAT1	ENSG00000172954.14	transcript	ENST00000379509.8	protein_coding	6/6	2506	INFO_REALIGN_3_PRIME	chr2	TogoVar
LCMT1_chr16_25106742_25183228	25179975	C C	CAAAAAAA others(13): Show CAAAAAAAAAAAAAAAAAAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02145.hp2 HG02615.hp1 others(2): Show HG02055.hp1 HG02145.hp2 HG02615.hp1 HG02630.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0187 a0001c0001t0001g0205 others(2): Show a0001c0001t0001g0135 a0001c0001t0001g0187 a0001c0001t0001g0205 a0001c0001t0001g0299 a0001c0001t0001g0304	5	348	0.0144	20	c.19 others(31): Show c.1952_*1953insAAAAAAAAAAAAAAAAAAAA	LCMT1	ENSG00000205629.12	transcript	ENST00000399069.8	protein_coding		1748		chr16	TogoVar
LCMT2_chr15_43318649_43335573	43334633	T T	TTATATAT others(13): Show TTATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG01071.hp1 others(23): Show HG00099.hp1 HG00280.hp2 HG01071.hp1 HG01496.hp1 HG01978.hp1 HG01993.hp2 HG02155.hp2 HG02257.hp1 HG02647.hp1 HG02698.hp2 HG02738.hp2 HG02809.hp1 HG03516.hp1 HG03654.hp2 HG03710.hp2 NA18984.hp2 NA19012.hp2 NA19054.hp1 NA19070.hp1 NA19070.hp2 NA19076.hp2 NA19090.hp1 NA19091.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(12): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020 a0001c0001t0022 a0001c0001t0026 a0001c0001t0031 a0001c0001t0043 a0001c0001t0061 a0001c0002t0005	a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0004g0000 others(12): Show a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0004g0000 a0001c0001t0008g0000 a0001c0001t0009g0000 a0001c0001t0011g0000 a0001c0001t0012g0000 a0001c0001t0019g0000 a0001c0001t0020g0000 a0001c0001t0022g0000 a0001c0001t0026g0000 a0001c0001t0031g0000 a0001c0001t0043g0000 a0001c0001t0061g0000 a0001c0002t0005g0000	26	410	0.0634	20	c.-41 others(31): Show c.-4164_-4145dupTATATATATATATATATATA	LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding		4061		chr15	TogoVar
LCN15_chr9_136754634_136769518	136769409	A A	ACCCCTCC others(13): Show ACCCCTCCATGCACTGCCCCC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp1 HG01433.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	356	0.0028	20	c.-49 others(31): Show c.-4922_-4921insGGGGGCAGTGCATGGAGGGG	LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding		4892		chr9	TogoVar
LCORL_chr4_17836187_18026755	17917940	A A	AAAAACAA others(13): Show AAAAACAAAACAAAACAAAAC	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0004 a0004c0005t0004	a0004c0005t0004g0220 a0004c0005t0004g0220	1	292	0.0034	20	c.431 others(37): Show c.431-8615_431-8596dupGTTTTGTTTTGTTTTGTTTT	LCORL	ENSG00000178177.17	transcript	ENST00000635767.2	protein_coding	4/7			chr4	TogoVar
LCOR_chr10_96827298_97000956	96832419	G G	GCCGCCGC others(13): Show GCCGCCGCCCCTCCGGCCGCC	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	288	0.0035	20	c.-40 others(35): Show c.-404+29_-404+48dupCCTCCGGCCGCCCCGCCGCC	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96912607	T T	TCTTCCTT others(13): Show TCTTCCTTCCTTCCTTCCTTC	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00733.hp1 HG00741.hp1 others(25): Show HG00673.hp1 HG00733.hp1 HG00741.hp1 HG01081.hp2 HG01099.hp2 HG01261.hp1 HG01361.hp2 HG01515.hp2 HG01993.hp1 HG02083.hp1 HG02622.hp2 HG02965.hp2 HG03516.hp2 HG03710.hp2 HG04115.hp2 HG04199.hp2 HG04228.hp2 NA18945.hp1 NA18952.hp1 NA18957.hp1 NA18961.hp2 NA18980.hp2 NA18983.hp1 NA18986.hp2 NA19012.hp1 NA19060.hp2 NA19068.hp1 NA19070.hp1	a0001 a0003 a0006 others(1): Show a0001 a0003 a0006 a0009	a0001c0001 a0001c0004 a0003c0003 others(2): Show a0001c0001 a0001c0004 a0003c0003 a0006c0008 a0009c0012	a0001c0001t0023 a0001c0001t0026 a0001c0001t0068 others(17): Show a0001c0001t0023 a0001c0001t0026 a0001c0001t0068 a0001c0001t0070 a0001c0001t0071 a0001c0001t0072 a0001c0001t0074 a0001c0004t0089 a0003c0003t0002 a0003c0003t0004 a0003c0003t0008 a0003c0003t0010 a0003c0003t0024 a0003c0003t0025 a0003c0003t0086 a0003c0003t0092 a0003c0003t0096 a0006c0008t0002 a0006c0008t0011 a0009c0012t0007	a0001c0001t0023g0130 a0001c0001t0023g0159 a0001c0001t0026g0223 others(25): Show a0001c0001t0023g0130 a0001c0001t0023g0159 a0001c0001t0026g0223 a0001c0001t0026g0242 a0001c0001t0068g0134 a0001c0001t0070g0139 a0001c0001t0071g0132 a0001c0001t0072g0135 a0001c0001t0074g0131 a0001c0004t0089g0055 a0003c0003t0002g0005 a0003c0003t0002g0046 a0003c0003t0002g0048 a0003c0003t0002g0057 a0003c0003t0004g0031 a0003c0003t0004g0035 a0003c0003t0004g0047 a0003c0003t0008g0280 a0003c0003t0010g0162 a0003c0003t0024g0161 a0003c0003t0024g0283 a0003c0003t0025g0045 a0003c0003t0086g0050 a0003c0003t0092g0042 a0003c0003t0096g0279 a0006c0008t0002g0051 a0006c0008t0011g0032 a0009c0012t0007g0063	28	288	0.0972	20	c.-18 others(39): Show c.-184+4880_-184+4899dupCCTTCCTTCCTTCCTTCCTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96912607	T T	TCTTCCTT others(13): Show TCTTCCTTCCTTTCTTCCTTC	intron_variant intron_variant	MODIFIER	NA19007.hp1 NA19064.hp2 NA19007.hp1 NA19064.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0036 a0002c0002t0009 a0002c0002t0036	a0002c0002t0009g0073 a0002c0002t0036g0072 a0002c0002t0009g0073 a0002c0002t0036g0072	2	288	0.0069	20	c.-18 others(39): Show c.-184+4871_-184+4872insTCTTCCTTCCTTCCTTCCTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96916587	C C	CTATATAT others(13): Show CTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02738.hp1 NA18983.hp1 HG02738.hp1 NA18983.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0085 a0003c0003t0004 a0003c0003t0085	a0003c0003t0004g0047 a0003c0003t0085g0056 a0003c0003t0004g0047 a0003c0003t0085g0056	2	288	0.0069	20	c.-18 others(39): Show c.-184+8859_-184+8860insATATATATATATATATATAT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96920434	G G	GTATATAT others(13): Show GTATATATGTATATATATTCA	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00438.hp1 others(217): Show HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01243.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01361.hp1 HG01515.hp1 HG01884.hp1 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG01993.hp1 HG01993.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18990.hp1 NA18990.hp2 NA18993.hp1 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19081.hp1 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012 a0013 a0014 a0016	a0001c0001 a0001c0004 a0001c0007 others(15): Show a0001c0001 a0001c0004 a0001c0007 a0001c0019 a0002c0002 a0002c0015 a0003c0003 a0005c0006 a0006c0008 a0007c0013 a0008c0011 a0009c0012 a0010c0010 a0011c0014 a0012c0017 a0013c0018 a0014c0020 a0016c0022	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(119): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0038 a0001c0001t0081 a0001c0001t0093 a0001c0001t0097 a0001c0001t0098 a0001c0001t0099 a0001c0001t0100 a0001c0001t0101 a0001c0001t0104 a0001c0001t0107 a0001c0001t0112 a0001c0001t0113 a0001c0001t0114 a0001c0001t0115 a0001c0001t0116 a0001c0001t0117 a0001c0001t0118 a0001c0001t0119 a0001c0001t0121 a0001c0001t0142 a0001c0001t0143 a0001c0001t0144 a0001c0004t0002 a0001c0004t0007 a0001c0004t0010 a0001c0004t0011 a0001c0004t0083 a0001c0004t0084 a0001c0004t0088 a0001c0004t0089 a0001c0004t0091 a0001c0004t0094 a0001c0004t0109 a0001c0004t0110 a0001c0004t0122 a0001c0007t0102 a0001c0007t0103 a0001c0007t0105 a0001c0007t0108 a0001c0019t0003 a0002c0002t0001 a0002c0002t0009 a0002c0002t0013 a0002c0002t0014 a0002c0002t0015 a0002c0002t0019 a0002c0002t0020 a0002c0002t0033 a0002c0002t0034 a0002c0002t0035 a0002c0002t0036 a0002c0002t0037 a0002c0002t0039 a0002c0002t0053 a0002c0002t0055 a0002c0002t0057 a0002c0002t0058 a0002c0002t0059 a0002c0002t0061 a0002c0002t0062 a0002c0002t0063 a0002c0002t0124 a0002c0002t0126 a0002c0002t0128 a0002c0002t0129 a0002c0002t0130 a0002c0002t0131 a0002c0002t0132 a0002c0002t0133 a0002c0002t0134 a0002c0002t0135 a0002c0002t0136 a0002c0002t0137 a0002c0002t0138 a0002c0002t0139 a0002c0002t0140 a0002c0002t0145 a0002c0015t0009 a0003c0003t0001 a0003c0003t0002 a0003c0003t0004 a0003c0003t0008 a0003c0003t0010 a0003c0003t0024 a0003c0003t0025 a0003c0003t0085 a0003c0003t0086 a0003c0003t0087 a0003c0003t0090 a0003c0003t0092 a0003c0003t0095 a0003c0003t0096 a0005c0006t0041 a0005c0006t0052 a0005c0006t0054 a0006c0008t0002 a0006c0008t0011 a0007c0013t0080 a0007c0013t0141 a0008c0011t0002 a0008c0011t0004 a0008c0011t0008 a0009c0012t0007 a0009c0012t0008 a0010c0010t0002 a0010c0010t0011 a0011c0014t0123 a0011c0014t0125 a0012c0017t0127 a0013c0018t0006 a0014c0020t0012 a0016c0022t0028	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0189 others(217): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0248 a0001c0001t0001g0250 a0001c0001t0001g0253 a0001c0001t0001g0256 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0263 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0003g0193 a0001c0001t0003g0194 a0001c0001t0003g0199 a0001c0001t0003g0210 a0001c0001t0003g0212 a0001c0001t0003g0214 a0001c0001t0003g0220 a0001c0001t0003g0237 a0001c0001t0003g0238 a0001c0001t0003g0243 a0001c0001t0003g0245 a0001c0001t0003g0265 a0001c0001t0005g0218 a0001c0001t0005g0221 a0001c0001t0005g0222 a0001c0001t0005g0235 a0001c0001t0005g0261 a0001c0001t0005g0262 a0001c0001t0006g0229 a0001c0001t0006g0241 a0001c0001t0006g0244 a0001c0001t0006g0251 a0001c0001t0006g0273 a0001c0001t0012g0252 a0001c0001t0012g0254 a0001c0001t0027g0188 a0001c0001t0028g0233 a0001c0001t0029g0239 a0001c0001t0029g0271 a0001c0001t0030g0209 a0001c0001t0030g0228 a0001c0001t0031g0267 a0001c0001t0031g0272 a0001c0001t0038g0059 a0001c0001t0038g0060 a0001c0001t0081g0231 a0001c0001t0093g0204 a0001c0001t0097g0008 a0001c0001t0098g0010 a0001c0001t0099g0216 a0001c0001t0100g0226 a0001c0001t0101g0247 a0001c0001t0104g0206 a0001c0001t0107g0178 a0001c0001t0112g0266 a0001c0001t0113g0191 a0001c0001t0114g0246 a0001c0001t0115g0227 a0001c0001t0116g0255 a0001c0001t0117g0224 a0001c0001t0118g0249 a0001c0001t0119g0208 a0001c0001t0121g0264 a0001c0001t0142g0061 a0001c0001t0143g0006 a0001c0001t0144g0257 a0001c0004t0002g0009 a0001c0004t0002g0029 a0001c0004t0002g0058 a0001c0004t0002g0154 a0001c0004t0002g0157 a0001c0004t0007g0019 a0001c0004t0007g0041 a0001c0004t0007g0126 a0001c0004t0007g0158 a0001c0004t0010g0049 a0001c0004t0010g0153 a0001c0004t0011g0155 a0001c0004t0083g0024 a0001c0004t0084g0025 a0001c0004t0088g0016 a0001c0004t0089g0055 a0001c0004t0091g0018 a0001c0004t0094g0017 a0001c0004t0109g0027 a0001c0004t0110g0043 a0001c0004t0122g0011 a0001c0007t0102g0181 a0001c0007t0103g0179 a0001c0007t0105g0182 a0001c0007t0108g0180 a0001c0019t0003g0195 a0002c0002t0001g0078 a0002c0002t0009g0073 a0002c0002t0009g0076 a0002c0002t0009g0092 a0002c0002t0009g0111 a0002c0002t0013g0067 a0002c0002t0013g0068 a0002c0002t0013g0083 a0002c0002t0013g0096 a0002c0002t0014g0065 a0002c0002t0014g0089 a0002c0002t0014g0101 a0002c0002t0014g0113 a0002c0002t0015g0102 a0002c0002t0015g0122 a0002c0002t0015g0123 a0002c0002t0019g0069 a0002c0002t0019g0086 a0002c0002t0019g0110 a0002c0002t0020g0090 a0002c0002t0020g0091 a0002c0002t0020g0116 a0002c0002t0033g0080 a0002c0002t0033g0112 a0002c0002t0034g0104 a0002c0002t0034g0114 a0002c0002t0035g0098 a0002c0002t0035g0100 a0002c0002t0036g0093 a0002c0002t0037g0071 a0002c0002t0037g0094 a0002c0002t0039g0084 a0002c0002t0053g0108 a0002c0002t0055g0109 a0002c0002t0057g0119 a0002c0002t0058g0107 a0002c0002t0059g0120 a0002c0002t0061g0118 a0002c0002t0062g0121 a0002c0002t0063g0117 a0002c0002t0124g0085 a0002c0002t0126g0160 a0002c0002t0128g0087 a0002c0002t0129g0070 a0002c0002t0130g0066 a0002c0002t0131g0103 a0002c0002t0132g0088 a0002c0002t0133g0074 a0002c0002t0134g0095 a0002c0002t0135g0082 a0002c0002t0136g0105 a0002c0002t0137g0097 a0002c0002t0138g0075 a0002c0002t0139g0099 a0002c0002t0140g0064 a0002c0002t0145g0115 a0002c0015t0009g0106 a0003c0003t0001g0036 a0003c0003t0002g0005 a0003c0003t0002g0046 a0003c0003t0002g0048 a0003c0003t0002g0057 a0003c0003t0002g0282 a0003c0003t0004g0026 a0003c0003t0004g0035 a0003c0003t0004g0038 a0003c0003t0004g0156 a0003c0003t0004g0177 a0003c0003t0008g0040 a0003c0003t0008g0280 a0003c0003t0010g0162 a0003c0003t0024g0161 a0003c0003t0024g0283 a0003c0003t0025g0045 a0003c0003t0085g0056 a0003c0003t0086g0050 a0003c0003t0087g0281 a0003c0003t0090g0054 a0003c0003t0092g0042 a0003c0003t0095g0053 a0003c0003t0096g0279 a0005c0006t0041g0163 a0005c0006t0052g0165 a0005c0006t0054g0164 a0006c0008t0002g0030 a0006c0008t0002g0033 a0006c0008t0002g0051 a0006c0008t0011g0032 a0007c0013t0080g0174 a0007c0013t0141g0175 a0008c0011t0002g0203 a0008c0011t0004g0202 a0008c0011t0008g0201 a0009c0012t0007g0063 a0009c0012t0008g0020 a0009c0012t0008g0021 a0010c0010t0002g0014 a0010c0010t0011g0015 a0010c0010t0011g0062 a0011c0014t0123g0079 a0011c0014t0125g0081 a0012c0017t0127g0077 a0013c0018t0006g0190 a0014c0020t0012g0211 a0016c0022t0028g0219	220	288	0.7639	20	c.-18 others(41): Show c.-184+12696_-184+12697insATATATATTCATATATATGT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96970598	C C	CATTTTAT others(13): Show CATTTTATTTTATTTTATTTT	intron_variant intron_variant	MODIFIER	HG02300.hp2 HG02976.hp1 HG02300.hp2 HG02976.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0006 a0002c0002 a0005c0006	a0002c0002t0009 a0005c0006t0060 a0002c0002t0009 a0005c0006t0060	a0002c0002t0009g0092 a0005c0006t0060g0287 a0002c0002t0009g0092 a0005c0006t0060g0287	2	288	0.0069	20	c.333 others(39): Show c.333-10185_333-10166dupTATTTTATTTTATTTTATTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	7/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989674	G G	GATATATA others(13): Show GATATATATATATATATATAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0047 a0004c0005t0047	a0004c0005t0047g0172 a0004c0005t0047g0172	1	288	0.0035	20	c.45 others(31): Show c.4543_*4562dupATATATATATATATATATAT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8	4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCOR_chr10_96827298_97000956	96989695	A A	ATATATAT others(13): Show ATATATATATATATATTTTTT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0054 a0005c0006t0054	a0005c0006t0054g0164 a0005c0006t0054g0164	1	288	0.0035	20	c.45 others(31): Show c.4562_*4563insATATATATATATATTTTTTT	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	8/8	4563	INFO_REALIGN_3_PRIME	chr10	TogoVar
LCP2_chr5_170241233_170302777	170268880	C C	CATGCACA others(13): Show CATGCACACACATGCATATAT	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00408.hp2 others(30): Show HG00280.hp1 HG00408.hp1 HG00408.hp2 HG00558.hp1 HG01346.hp2 HG01884.hp2 HG02040.hp1 HG02300.hp2 HG02559.hp2 HG02622.hp2 HG02965.hp2 HG02970.hp2 HG03516.hp1 HG03579.hp2 HG03669.hp1 NA18612.hp1 NA18747.hp1 NA18940.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp2 NA18946.hp2 NA18951.hp1 NA18952.hp1 NA18966.hp2 NA18979.hp2 NA18998.hp2 NA19060.hp1 NA19065.hp1 NA19074.hp1 NA19081.hp1 NA20300.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0009 a0001c0002t0001 a0001c0002t0003 a0001c0002t0006 a0001c0002t0012 a0001c0003t0002 a0001c0003t0003 a0001c0003t0004 a0001c0004t0002 a0001c0004t0025	a0001c0001t0001g0130 a0001c0001t0001g0133 a0001c0001t0001g0181 others(30): Show a0001c0001t0001g0130 a0001c0001t0001g0133 a0001c0001t0001g0181 a0001c0001t0001g0260 a0001c0001t0001g0350 a0001c0001t0001g0352 a0001c0001t0001g0356 a0001c0001t0001g0357 a0001c0001t0001g0362 a0001c0001t0001g0367 a0001c0001t0003g0021 a0001c0001t0003g0063 a0001c0001t0003g0120 a0001c0001t0005g0116 a0001c0001t0009g0126 a0001c0002t0001g0370 a0001c0002t0003g0026 a0001c0002t0006g0328 a0001c0002t0012g0329 a0001c0003t0002g0170 a0001c0003t0002g0229 a0001c0003t0002g0261 a0001c0003t0002g0265 a0001c0003t0003g0051 a0001c0003t0004g0025 a0001c0003t0004g0032 a0001c0003t0004g0075 a0001c0003t0004g0077 a0001c0003t0004g0086 a0001c0003t0004g0089 a0001c0003t0004g0101 a0001c0004t0002g0327 a0001c0004t0025g0342	33	384	0.0859	20	c.524 others(35): Show c.524-418_524-399dupATATATGCATGTGTGTGCAT	LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	7/20			chr5	TogoVar
LCP2_chr5_170241233_170302777	170268880	C C	CATGCACA others(13): Show CATGCACACACATGTATATAT	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0005 a0005	a0005c0014 a0005c0014	a0005c0014t0013 a0005c0014t0013	a0005c0014t0013g0382 a0005c0014t0013g0382	1	384	0.0026	20	c.524 others(35): Show c.524-399_524-398insATATATACATGTGTGTGCAT	LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	7/20			chr5	TogoVar
LCP2_chr5_170241233_170302777	170291199	C C	CAGGAAGG others(13): Show CAGGAAGGAAGGAAGGAAGGA	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01099.hp2 others(3): Show HG01070.hp1 HG01071.hp2 HG01099.hp2 HG01192.hp2 HG02922.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0002t0001 a0001c0002t0006 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0006 a0001c0003t0002	a0001c0001t0001g0240 a0001c0002t0001g0368 a0001c0002t0006g0321 others(3): Show a0001c0001t0001g0240 a0001c0002t0001g0368 a0001c0002t0006g0321 a0001c0003t0002g0377 a0001c0003t0002g0378 a0001c0003t0002g0379	6	384	0.0156	20	c.141 others(37): Show c.141+2091_141+2110dupTCCTTCCTTCCTTCCTTCCT	LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	2/20			chr5	TogoVar
LCP2_chr5_170241233_170302777	170291222	G G	GAAGGAAG others(13): Show GAAGGAAGGAAGGAAGGAAGA	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG01981.hp2 HG01943.hp2 HG01981.hp2	a0001 a0001	a0001c0003 a0001c0005 a0001c0003 a0001c0005	a0001c0003t0002 a0001c0005t0002 a0001c0003t0002 a0001c0005t0002	a0001c0003t0002g0151 a0001c0005t0002g0128 a0001c0003t0002g0151 a0001c0005t0002g0128	2	384	0.0052	20	c.141 others(37): Show c.141+2087_141+2088insTCTTCCTTCCTTCCTTCCTT	LCP2	ENSG00000043462.13	transcript	ENST00000046794.10	protein_coding	2/20			chr5	TogoVar
LCTL_chr15_66542532_66570998	66544719	G G	GTTTTGTG others(13): Show GTTTTGTGTGTGTGTGTGTGT	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0143 a0001c0001t0002g0143	1	434	0.0023	20	c.37 others(31): Show c.3770_*3771insACACACACACACACACAAAA	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2812		chr15	TogoVar
LCTL_chr15_66542532_66570998	66544724	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01069.hp1 HG01071.hp2 HG02976.hp2 others(2): Show HG01069.hp1 HG01071.hp2 HG02976.hp2 HG03130.hp1 HG06807.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0001c0012 others(1): Show a0001c0001 a0001c0003 a0001c0012 a0004c0007	a0001c0001t0001 a0001c0003t0001 a0001c0012t0003 others(1): Show a0001c0001t0001 a0001c0003t0001 a0001c0012t0003 a0004c0007t0001	a0001c0001t0001g0038 a0001c0003t0001g0196 a0001c0012t0003g0248 others(1): Show a0001c0001t0001g0038 a0001c0003t0001g0196 a0001c0012t0003g0248 a0004c0007t0001g0055	5	434	0.0115	20	c.37 others(31): Show c.3746_*3765dupCACACACACACACACACACA	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding		2807		chr15	TogoVar
LDAF1_chr16_21153674_21185616	21156996	A A	AACACACA others(13): Show AACACACACACACACACACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03209.hp1 HG03453.hp1 HG03209.hp1 HG03453.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0002 a0003c0003t0001 a0003c0003t0002	a0003c0003t0001g0201 a0003c0003t0002g0200 a0003c0003t0001g0201 a0003c0003t0002g0200	2	390	0.0051	20	c.-18 others(31): Show c.-1849_-1848insACACACACACACACACACAC	LDAF1	ENSG00000011638.11	transcript	ENST00000233047.9	protein_coding		1677		chr16	TogoVar
LDAH_chr2_20679031_20828101	20716720	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG02132.hp2 HG03139.hp2 others(1): Show HG01346.hp2 HG02132.hp2 HG03139.hp2 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007	a0001c0001t0001g0202 a0001c0001t0003g0201 a0001c0001t0005g0113 others(1): Show a0001c0001t0001g0202 a0001c0001t0003g0201 a0001c0001t0005g0113 a0001c0001t0007g0203	4	258	0.0155	20	c.704 others(39): Show c.704-15069_704-15068insTATATATATATATATATATA	LDAH	ENSG00000118961.15	transcript	ENST00000237822.8	protein_coding	5/6			chr2	TogoVar
LDAH_chr2_20679031_20828101	20827764	A A	AAAATAAA others(13): Show AAAATAAATAAATAAATAAAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0229 a0001c0001t0001g0229	1	258	0.0039	20	c.-47 others(31): Show c.-4731_-4730insATTTATTTATTTATTTATTT	LDAH	ENSG00000118961.15	transcript	ENST00000237822.8	protein_coding		4664		chr2	TogoVar
LDB2_chr4_16496541_16903645	16592505	T T	TATATATA others(13): Show TATATATATATATATACACAC	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0007 a0001c0002t0001g0007	1	162	0.0062	20	c.408 others(37): Show c.408+3197_408+3198insGTGTGTATATATATATATAT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	3/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16659671	G G	GTGTGTAT others(13): Show GTGTGTATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0154	1	162	0.0062	20	c.236 others(39): Show c.236-63797_236-63796insTATATATATATATATACACA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16690459	C C	CAGGAAGG others(13): Show CAGGAAGGAAGGAAGGAAGGA	intron_variant intron_variant	MODIFIER	HG02451.hp1 NA18986.hp2 NA18993.hp1 HG02451.hp1 NA18986.hp2 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0076 a0001c0001t0001g0081 a0001c0001t0003g0139 a0001c0001t0001g0076 a0001c0001t0001g0081 a0001c0001t0003g0139	3	162	0.0185	20	c.235 others(39): Show c.235+68679_235+68698dupTCCTTCCTTCCTTCCTTCCT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16697266	T T	TACACACA others(13): Show TACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02615.hp2 HG03579.hp1 HG00423.hp2 HG02615.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0075 a0001c0001t0002g0121 a0001c0001t0004g0062 a0001c0001t0001g0075 a0001c0001t0002g0121 a0001c0001t0004g0062	3	162	0.0185	20	c.235 others(39): Show c.235+61872_235+61891dupGTGTGTGTGTGTGTGTGTGT	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16755472	G G	GGTGTGTG others(13): Show GGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0057 a0001c0001t0001g0057	1	162	0.0062	20	c.235 others(37): Show c.235+3666_235+3685dupACACACACACACACACACAC	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	2/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16812582	T T	TTATATAT others(13): Show TTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02965.hp2 HG03471.hp2 others(1): Show HG02897.hp1 HG02965.hp2 HG03471.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0008 a0001c0001t0001 a0001c0002t0001 a0001c0002t0008	a0001c0001t0001g0057 a0001c0001t0001g0143 a0001c0002t0001g0001 others(1): Show a0001c0001t0001g0057 a0001c0001t0001g0143 a0001c0002t0001g0001 a0001c0002t0008g0035	4	162	0.0247	20	c.133 others(39): Show c.133-53342_133-53323dupTATATATATATATATATATA	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding	1/7			chr4	TogoVar
LDB2_chr4_16496541_16903645	16898837	G G	GGAGAGAG others(13): Show GGAGAGAGAGAGAGAGAGAGA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0097 a0001c0003t0001g0097	1	162	0.0062	20	c.-35 others(29): Show c.-353_-352insTCTCTCTCTCTCTCTCTCTC	LDB2	ENSG00000169744.13	transcript	ENST00000304523.10	protein_coding		193		chr4	TogoVar
LDHAL6A_chr11_18450856_18484601	18464977	G G	GTTTGTTT others(13): Show GTTTGTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03486.hp1 NA18522.hp1 HG02818.hp1 HG03486.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0037 a0001c0001t0040 a0001c0001t0036 a0001c0001t0037 a0001c0001t0040	a0001c0001t0036g0286 a0001c0001t0037g0284 a0001c0001t0040g0285 a0001c0001t0036g0286 a0001c0001t0037g0284 a0001c0001t0040g0285	3	420	0.0071	20	c.245 others(35): Show c.245-657_245-656insGTTTTTTTTTTTTTTTTTTT	LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDHAL6A_chr11_18450856_18484601	18467902	T T	TATATATA others(13): Show TATATATATATACACACACAC	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0013 a0001c0002t0013	a0001c0002t0013g0289 a0001c0002t0013g0289	1	420	0.0024	20	c.418 others(37): Show c.418+2103_418+2104insCACACACACATATATATATA	LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDHAL6A_chr11_18450856_18484601	18467994	T T	TATATATA others(13): Show TATATATACGTATATATATAC	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0284 a0001c0001t0037g0284	1	420	0.0024	20	c.418 others(37): Show c.418+2192_418+2211dupCGTATATATATACATATATA	LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDHAL6B_chr15_59201843_59213588	59205509	G G	GAATTTCA others(13): Show GAATTTCATTGAACAAAATGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00738.hp1 HG01175.hp2 others(47): Show HG00423.hp2 HG00738.hp1 HG01175.hp2 HG01346.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01943.hp2 HG01952.hp2 HG01975.hp2 HG02056.hp1 HG02145.hp1 HG02257.hp1 HG02258.hp2 HG02451.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp2 HG02886.hp2 HG02976.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03516.hp2 HG03540.hp2 HG03688.hp1 HG03927.hp1 HG06807.hp2 NA18906.hp2 NA18945.hp1 NA18947.hp1 NA18968.hp2 NA18986.hp2 NA19004.hp1 NA19030.hp2 NA19057.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19084.hp2 NA19090.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp2	a0001 a0001	a0001c0003 a0001c0006 a0001c0003 a0001c0006	a0001c0003t0003 a0001c0003t0004 a0001c0003t0006 others(2): Show a0001c0003t0003 a0001c0003t0004 a0001c0003t0006 a0001c0003t0013 a0001c0006t0004	a0001c0003t0003g0000 a0001c0003t0004g0000 a0001c0003t0006g0000 others(2): Show a0001c0003t0003g0000 a0001c0003t0004g0000 a0001c0003t0006g0000 a0001c0003t0013g0000 a0001c0006t0004g0000	50	448	0.1116	20	c.-14 others(31): Show c.-1432_-1431insAATTTCATTGAACAAAATGT	LDHAL6B	ENSG00000171989.6	transcript	ENST00000307144.6	protein_coding		1333		chr15	TogoVar
LDHA_chr11_18389563_18413425	18401955	C C	CTCTCTTT others(13): Show CTCTCTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp1 HG01081.hp1 others(8): Show HG00140.hp1 HG00639.hp1 HG01081.hp1 HG01099.hp2 HG01175.hp2 HG01993.hp2 HG02055.hp2 HG02280.hp2 HG02523.hp1 HG03654.hp1 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0021 a0001c0001t0001g0046 a0001c0001t0001g0059 others(6): Show a0001c0001t0001g0021 a0001c0001t0001g0046 a0001c0001t0001g0059 a0001c0001t0001g0112 a0001c0001t0001g0129 a0001c0001t0001g0136 a0001c0001t0001g0156 a0001c0001t0001g0188 a0001c0001t0006g0021	11	390	0.0282	20	c.419 others(35): Show c.419-884_419-883insCTCTTTTTTTTTTTTTTTTT	LDHA	ENSG00000134333.15	transcript	ENST00000422447.8	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDHC_chr11_18407318_18457063	18444604	G G	GTATATAT others(13): Show GTATATATATATATATATATA	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0167 a0001c0001t0001g0167	1	348	0.0029	20	c.711 others(37): Show c.711-1580_711-1561dupATATATATATATATATATAT	LDHC	ENSG00000166796.12	transcript	ENST00000541669.6	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD2_chr1_21807265_21830225	21813723	C C	CGGCTCAA others(13): Show CGGCTCAACAATGTCACTGTT	intron_variant intron_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0225 a0004c0007t0001g0225	1	454	0.0022	20	c.86- others(33): Show c.86-674_86-655dupGGCTCAACAATGTCACTGTT	LDLRAD2	ENSG00000187942.12	transcript	ENST00000344642.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr1	TogoVar
LDLRAD3_chr11_35939062_36237136	35991867	T T	TTGTGTGT others(13): Show TTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0004 a0002c0003t0004	a0002c0003t0004g0235 a0002c0003t0004g0235	1	236	0.0042	20	c.47- others(37): Show c.47-44218_47-44199dupGTGTGTGTGTGTGTGTGTGT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36054840	A A	AATGGATG others(13): Show AATGGATGGATGGATGGATGG	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02451.hp2 HG02622.hp2 others(3): Show HG02109.hp1 HG02451.hp2 HG02622.hp2 HG02630.hp2 HG03130.hp1 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0002t0004	a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0005g0200 others(3): Show a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0005g0200 a0001c0001t0007g0218 a0001c0001t0008g0199 a0001c0002t0004g0219	6	236	0.0254	20	c.193 others(39): Show c.193+18599_193+18618dupGATGGATGGATGGATGGATG	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36105238	T T	TGTGTGTG others(13): Show TGTGTGTGTGTGTGTGTGTGA	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0011 a0001c0002t0011	a0001c0002t0011g0216 a0001c0002t0011g0216	1	236	0.0042	20	c.454 others(37): Show c.454+6778_454+6779insTGTGTGTGTGTGTGTGTGAG	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36128117	C C	CATATATA others(13): Show CATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA18944.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0083 a0001c0002t0001g0083	1	236	0.0042	20	c.454 others(39): Show c.454+29674_454+29675insATATATATATATATATATAT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36140992	T T	TTCTCTCT others(13): Show TTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0116 a0001c0002t0001g0116	1	236	0.0042	20	c.454 others(39): Show c.454+42556_454+42575dupTCTCTCTCTCTCTCTCTCTC	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36144827	G G	GGAGGTGA others(13): Show GGAGGTGAGGGGCGCCTCTAC	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18944.hp2 NA18612.hp2 NA18944.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0172 a0001c0002t0001g0083 a0001c0001t0001g0172 a0001c0002t0001g0083	2	236	0.0085	20	c.454 others(39): Show c.454+46366_454+46367insGAGGTGAGGGGCGCCTCTAC	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5			chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36146773	C C	CTTTATTT others(13): Show CTTTATTTTATTTTATTTTAT	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02559.hp1 HG02683.hp2 others(8): Show HG01361.hp2 HG02559.hp1 HG02683.hp2 HG02809.hp1 HG02922.hp2 HG02965.hp2 HG03130.hp1 HG03130.hp2 HG04115.hp2 HG04184.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0020 a0001c0001t0025 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0008	a0001c0001t0001g0207 a0001c0001t0002g0078 a0001c0001t0008g0199 others(8): Show a0001c0001t0001g0207 a0001c0001t0002g0078 a0001c0001t0008g0199 a0001c0001t0020g0010 a0001c0001t0025g0201 a0001c0002t0001g0147 a0001c0002t0002g0002 a0001c0002t0002g0134 a0001c0002t0002g0217 a0001c0002t0005g0156 a0001c0002t0008g0039	11	236	0.0466	20	c.454 others(39): Show c.454+48319_454+48338dupTTATTTTATTTTATTTTATT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36165976	C C	CCCTCCCT others(13): Show CCCTCCCTCCCTCCCTCCCTT	intron_variant intron_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0021 a0001c0002t0001g0021	1	236	0.0042	20	c.455 others(39): Show c.455-61106_455-61105insCCCTCCCTCCCTCCCTTCCT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD3_chr11_35939062_36237136	36191576	C C	CTCTCTCT others(13): Show CTCTCTCTCTCTCTCTCTCTA	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0102 a0001c0002t0001g0102	1	236	0.0042	20	c.455 others(39): Show c.455-35508_455-35507insCTCTCTCTCTCTCTCTCTAT	LDLRAD3	ENSG00000179241.13	transcript	ENST00000315571.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr11	TogoVar
LDLRAD4_chr18_13213760_13657751	13226180	C C	CTCTTTTT others(13): Show CTCTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0138 a0001c0001t0002g0138	1	178	0.0056	20	c.-46 others(39): Show c.-467+7193_-467+7194insCTTTTTTTTTTTTTTTTTTT	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr18	TogoVar
LDLRAD4_chr18_13213760_13657751	13226180	C C	CTTTTTTT others(13): Show CTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0026 a0001c0001t0001g0026	1	178	0.0056	20	c.-46 others(39): Show c.-467+7194_-467+7213dupTTTTTTTTTTTTTTTTTTTT	LDLRAD4	ENSG00000168675.19	transcript	ENST00000359446.11	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr18	TogoVar

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