Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLC9C1_chr3_112135898_112299216	112295666	G G	GATTATAT others(21): Show GATTATATATATATATATATATATATATA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19084.hp1 NA19084.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0236 a0002c0001t0001g0236	1	368	0.0027	28	c.-16 others(39): Show c.-1662_-1661insTATATATATATATATATATATATATAAT	SLC9C1	ENSG00000172139.15	transcript	ENST00000305815.10	protein_coding		1451		chr3	TogoVar
SLCO1B3_chr12_20805705_20921911	20918434	G G	GTATGTGT others(21): Show GTATGTGTGTGTATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18960.hp1 NA18965.hp1 NA18960.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0145 a0001c0001t0001g0132 a0001c0001t0001g0145	2	71	0.0282	28	c.21 others(39): Show c.2187_*2188insTATGTGTGTGTATATATATATATATATA	SLCO1B3	ENSG00000111700.13	transcript	ENST00000381545.8	protein_coding		1524		chr12	TogoVar
SLCO1C1_chr12_20690332_20758386	20740787	T T	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02818.hp2 NA18612.hp2 others(1): Show HG02735.hp2 HG02818.hp2 NA18612.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0003 a0001c0001t0001 a0001c0004t0003	a0001c0001t0001g0076 a0001c0001t0001g0180 a0001c0004t0003g0042 others(1): Show a0001c0001t0001g0076 a0001c0001t0001g0180 a0001c0004t0003g0042 a0001c0004t0003g0182	4	9	0.4444	28	c.173 others(45): Show c.1733+423_1733+450dupATATATATATATATATATATATATATAT	SLCO1C1	ENSG00000139155.9	transcript	ENST00000266509.7	protein_coding	12/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
SLCO3A1_chr15_91848708_92170903	91880170	C C	CATCCATC others(21): Show CATCCATCTATCTATCTATCTATCTATCT	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0056 a0001c0001t0056	a0001c0001t0056g0179 a0001c0001t0056g0179	1	77	0.0130	28	c.180 others(47): Show c.180+26085_180+26086insCATCTATCTATCTATCTATCTATCTA TC	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91926596	T T	TGTGTGTG others(21): Show TGTGTGTGTGTGTGTGTGTGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02258.hp1 HG01109.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0001 a0001c0009t0001 a0001c0001t0001 a0001c0009t0001	a0001c0001t0001g0104 a0001c0009t0001g0059 a0001c0001t0001g0104 a0001c0009t0001g0059	2	66	0.0303	28	c.646 others(47): Show c.646+10139_646+10140insTGTGTGTGTGTGTGTGTGCGCGCGCG CG	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	91926596	T T	TGTGTGTG others(21): Show TGTGTGTGTGTGTGTGTGTGTGTGTGCGC	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0020 a0001c0001t0003g0020	1	65	0.0154	28	c.646 others(47): Show c.646+10139_646+10140insTGTGTGTGTGTGTGTGTGTGTGTGCG CG	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92016254	T T	TAGATAGA others(21): Show TAGATAGATAGATTAGATAGATAGATAGA	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00621.hp1 others(4): Show HG00099.hp2 HG00280.hp1 HG00621.hp1 HG02109.hp2 HG03225.hp2 HG03491.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0054 a0001c0006t0004	a0001c0001t0001g0028 a0001c0001t0003g0056 a0001c0001t0006g0165 others(4): Show a0001c0001t0001g0028 a0001c0001t0003g0056 a0001c0001t0006g0165 a0001c0001t0008g0131 a0001c0001t0010g0021 a0001c0001t0054g0168 a0001c0006t0004g0113	7	102	0.0686	28	c.647 others(47): Show c.647-78627_647-78626insAGATAGATAGATTAGATAGATAGATA GA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9			chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92016254	T T	TAGATAGA others(21): Show TAGATAGATTAGATAGATAGATAGATAGA	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01358.hp1 HG01256.hp2 HG01358.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0030 a0001c0002t0003 a0001c0002t0030	a0001c0002t0003g0133 a0001c0002t0030g0078 a0001c0002t0003g0133 a0001c0002t0030g0078	2	97	0.0206	28	c.647 others(47): Show c.647-78627_647-78626insAGATAGATTAGATAGATAGATAGATA GA	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9			chr15	TogoVar
SLCO3A1_chr15_91848708_92170903	92028908	A A	AGTGTGTG others(21): Show AGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0130 a0001c0001t0029g0130	1	4	0.2500	28	c.647 others(47): Show c.647-65964_647-65937dupGTGTGTGTGTGTGTGTGTGTGTGTGT GT	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLCO5A1_chr8_69662046_69839978	69784811	A A	AAAAGAAA others(21): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAG	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01934.hp2 HG02015.hp2 others(2): Show HG01243.hp1 HG01934.hp2 HG02015.hp2 HG02572.hp2 HG03130.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0013 a0001c0001 a0002c0002 a0002c0013	a0001c0001t0062 a0002c0002t0017 a0002c0002t0047 others(2): Show a0001c0001t0062 a0002c0002t0017 a0002c0002t0047 a0002c0002t0103 a0002c0013t0096	a0001c0001t0062g0153 a0002c0002t0017g0069 a0002c0002t0047g0131 others(2): Show a0001c0001t0062g0153 a0002c0002t0017g0069 a0002c0002t0047g0131 a0002c0002t0103g0269 a0002c0013t0096g0265	5	42	0.1190	28	c.908 others(47): Show c.908-22964_908-22937dupCTTTCTTTCTTTCTTTCTTTCTTTCT TT	SLCO5A1	ENSG00000137571.11	transcript	ENST00000260126.9	protein_coding	2/9			chr8	TogoVar
SLCO5A1_chr8_69662046_69839978	69784848	A A	AAAGAAAG others(21): Show AAAGAAAGAAAGAAAGAAAGAAAGAAAGG	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0050 a0002c0002t0050	a0002c0002t0050g0177 a0002c0002t0050g0177	1	275	0.0036	28	c.908 others(47): Show c.908-22974_908-22973insCCTTTCTTTCTTTCTTTCTTTCTTTC TT	SLCO5A1	ENSG00000137571.11	transcript	ENST00000260126.9	protein_coding	2/9			chr8	TogoVar
SLCO6A1_chr5_102366774_102504001	102370276	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0106 a0001c0001t0001g0106	1	304	0.0033	28	c.18 others(39): Show c.1862_*1863insTATATATATATATATATATATATATATA	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding		1497		chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102383094	G G	GTGTGTAT others(21): Show GTGTGTATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG03098.hp2 HG03453.hp1 HG00738.hp2 HG03098.hp2 HG03453.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0001 a0004c0005t0001 a0001c0001t0001 a0004c0005t0001	a0001c0001t0001g0015 a0004c0005t0001g0010 a0004c0005t0001g0012 a0001c0001t0001g0015 a0004c0005t0001g0010 a0004c0005t0001g0012	3	116	0.0259	28	c.201 others(47): Show c.2017+5593_2017+5594insTATATATATATATATATATATATACA CA	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding	12/13			chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102383094	G G	GTGTGTGT others(21): Show GTGTGTGTGTGTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02145.hp1 others(7): Show HG01243.hp2 HG02055.hp2 HG02145.hp1 HG02280.hp1 HG02572.hp2 HG02717.hp1 HG02886.hp2 HG03041.hp2 HG03516.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0268 others(7): Show a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276	10	123	0.0813	28	c.201 others(47): Show c.2017+5593_2017+5594insTATATATATATATATATACACACACA CA	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding	12/13			chr5	TogoVar
SLCO6A1_chr5_102366774_102504001	102455027	T T	TATATATA others(21): Show TATATATATATATATATATATATACATAA	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01884.hp1 HG02896.hp2 others(1): Show HG01099.hp1 HG01884.hp1 HG02896.hp2 NA19043.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0003 a0003c0004 a0001c0001 a0002c0003 a0003c0004	a0001c0001t0001 a0002c0003t0001 a0003c0004t0003 a0001c0001t0001 a0002c0003t0001 a0003c0004t0003	a0001c0001t0001g0019 a0001c0001t0001g0253 a0002c0003t0001g0264 others(1): Show a0001c0001t0001g0019 a0001c0001t0001g0253 a0002c0003t0001g0264 a0003c0004t0003g0320	4	117	0.0342	28	c.113 others(47): Show c.1131+3354_1131+3355insTTATGTATATATATATATATATATAT AT	SLCO6A1	ENSG00000205359.10	transcript	ENST00000506729.6	protein_coding	6/13			chr5	TogoVar
SLF2_chr10_100907963_100970134	100940820	C C	CTCCTTCC others(21): Show CTCCTTCCTTCCTTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG04184.hp2 HG04228.hp1 HG04184.hp2 HG04228.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0232 a0002c0002t0004g0237 a0002c0002t0004g0232 a0002c0002t0004g0237	2	255	0.0078	28	c.265 others(47): Show c.2654+2088_2654+2115dupTTCCTTCCTTCCTTCCTTCCTTCCTT CC	SLF2	ENSG00000119906.13	transcript	ENST00000238961.9	protein_coding	11/19		INFO_REALIGN_3_PRIME	chr10	TogoVar
SLFN12_chr17_35405922_35437500	35434408	G G	GAAGGGAA others(21): Show GAAGGGAAAGAAAGAAAGAAAGAAAGAAA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0082 a0001c0001t0002g0082	1	144	0.0069	28	c.-22 others(39): Show c.-2262_-2261insTTTCTTTCTTTCTTTCTTTCTTTCCCTT	SLFN12	ENSG00000172123.13	transcript	ENST00000304905.10	protein_coding		1909		chr17	TogoVar
SLFN12_chr17_35405922_35437500	35434437	G G	GAAAGAAA others(21): Show GAAAGAAAGAAAGAAAGAAAGAAAGAGGA	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0218 a0001c0001t0001g0218	1	216	0.0046	28	c.-22 others(39): Show c.-2291_-2290insTCCTCTTTCTTTCTTTCTTTCTTTCTTT	SLFN12	ENSG00000172123.13	transcript	ENST00000304905.10	protein_coding		1938		chr17	TogoVar
SLFN12_chr17_35405922_35437500	35434453	A A	AAGGAAGG others(21): Show AAGGAAGGAAAGGAAGGAAGGAAGGAAGG	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0228 a0001c0001t0001g0228	1	167	0.0060	28	c.-23 others(39): Show c.-2307_-2306insCCTTCCTTCCTTCCTTCCTTTCCTTCCT	SLFN12	ENSG00000172123.13	transcript	ENST00000304905.10	protein_coding		1954		chr17	TogoVar
SLFN13_chr17_35430096_35453766	35434408	G G	GAAGGAAG others(21): Show GAAGGAAGGAAGGAAGGAAGGAAGAAAGA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0022 a0004c0004t0022	a0004c0004t0022g0030 a0004c0004t0022g0030	1	153	0.0065	28	c.61 others(39): Show c.6186_*6187insTCTTTCTTCCTTCCTTCCTTCCTTCCTT	SLFN13	ENSG00000154760.14	transcript	ENST00000285013.11	protein_coding		687		chr17	TogoVar
SLFN13_chr17_35430096_35453766	35434408	G G	GAAGGGAA others(21): Show GAAGGGAAAGAAAGAAAGAAAGAAAGAAA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0013 a0013	a0013c0022 a0013c0022	a0013c0022t0035 a0013c0022t0035	a0013c0022t0035g0174 a0013c0022t0035g0174	1	153	0.0065	28	c.61 others(39): Show c.6186_*6187insTTTCTTTCTTTCTTTCTTTCTTTCCCTT	SLFN13	ENSG00000154760.14	transcript	ENST00000285013.11	protein_coding		687		chr17	TogoVar
SLFN13_chr17_35430096_35453766	35434437	G G	GAAAGAAA others(21): Show GAAAGAAAGAAAGAAAGAAAGAAAGAGGA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0004 a0004	a0004c0037 a0004c0037	a0004c0037t0024 a0004c0037t0024	a0004c0037t0024g0058 a0004c0037t0024g0058	1	227	0.0044	28	c.61 others(39): Show c.6157_*6158insTCCTCTTTCTTTCTTTCTTTCTTTCTTT	SLFN13	ENSG00000154760.14	transcript	ENST00000285013.11	protein_coding		658		chr17	TogoVar
SLFN13_chr17_35430096_35453766	35434453	A A	AAGGAAGG others(21): Show AAGGAAGGAAAGGAAGGAAGGAAGGAAGG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0011 a0011	a0011c0012 a0011c0012	a0011c0012t0011 a0011c0012t0011	a0011c0012t0011g0012 a0011c0012t0011g0012	1	180	0.0056	28	c.61 others(39): Show c.6141_*6142insCCTTCCTTCCTTCCTTCCTTTCCTTCCT	SLFN13	ENSG00000154760.14	transcript	ENST00000285013.11	protein_coding		642		chr17	TogoVar
SLFN14_chr17_35538985_35565819	35552659	T T	TACATATA others(21): Show TACATATATATATACACATATATATATAC	intron_variant intron_variant	MODIFIER	NA18948.hp2 NA18950.hp1 NA19002.hp2 others(2): Show NA18948.hp2 NA18950.hp1 NA19002.hp2 NA19063.hp2 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0057 a0001c0001t0001g0016 a0001c0001t0001g0057	5	242	0.0207	28	c.190 others(43): Show c.1904+70_1904+71insGTATATATATATGTGTATATATATATGT	SLFN14	ENSG00000236320.4	transcript	ENST00000674182.1	protein_coding	5/5			chr17	TogoVar
SLFN14_chr17_35538985_35565819	35552663	C C	CATATATA others(21): Show CATATATATATACACATATATATACACAT	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02258.hp2 HG02630.hp2 others(13): Show HG01884.hp2 HG02258.hp2 HG02630.hp2 HG02886.hp2 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03209.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG06807.hp2 NA21309.hp2	a0006 a0008 a0006 a0008	a0006c0007 a0008c0009 a0008c0029 a0006c0007 a0008c0009 a0008c0029	a0006c0007t0006 a0006c0007t0026 a0008c0009t0006 others(1): Show a0006c0007t0006 a0006c0007t0026 a0008c0009t0006 a0008c0029t0006	a0006c0007t0006g0010 a0006c0007t0006g0017 a0006c0007t0026g0095 others(2): Show a0006c0007t0006g0010 a0006c0007t0006g0017 a0006c0007t0026g0095 a0008c0009t0006g0013 a0008c0029t0006g0121	16	199	0.0804	28	c.190 others(43): Show c.1904+66_1904+67insATGTGTATATATATGTGTATATATATAT	SLFN14	ENSG00000236320.4	transcript	ENST00000674182.1	protein_coding	5/5			chr17	TogoVar
SLFN14_chr17_35538985_35565819	35561745	A A	AAAAGAAA others(21): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0019 a0005c0005t0019	a0005c0005t0019g0125 a0005c0005t0019g0125	1	197	0.0051	28	c.-11 others(39): Show c.-1103_-1102insCTTTCTTTCTTTCTTTCTTTCTTTCTTT	SLFN14	ENSG00000236320.4	transcript	ENST00000674182.1	protein_coding		927		chr17	TogoVar
SLIT1_chr10_96993038_97190959	97166557	A A	AGGAAGGA others(21): Show AGGAAGGAAAGAGAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0161	1	118	0.0085	28	c.198 others(45): Show c.198-1668_198-1667insCTCTCTCTCTCTCTCTCTCTTTCCTTCC	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166557	A A	AGGAAGGA others(21): Show AGGAAGGAAGGAAAGAGAGAGAGAGAGAG	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03688.hp2 HG03041.hp2 HG03688.hp2	a0001 a0001	a0001c0004 a0001c0005 a0001c0004 a0001c0005	a0001c0004t0001 a0001c0005t0009 a0001c0004t0001 a0001c0005t0009	a0001c0004t0001g0228 a0001c0005t0009g0090 a0001c0004t0001g0228 a0001c0005t0009g0090	2	119	0.0168	28	c.198 others(45): Show c.198-1668_198-1667insCTCTCTCTCTCTCTCTTTCCTTCCTTCC	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT1_chr10_96993038_97190959	97166569	G G	GAGAAAGA others(21): Show GAGAAAGAAAGAAAGAAAGAAAGAAAGAA	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA18993.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0195 a0001c0004t0001g0195	1	95	0.0105	28	c.198 others(45): Show c.198-1707_198-1680dupTTCTTTCTTTCTTTCTTTCTTTCTTTCT	SLIT1	ENSG00000187122.17	transcript	ENST00000266058.9	protein_coding	1/36			chr10	TogoVar
SLIT2_chr4_20246905_20625561	20307160	C C	CTCCCTCC others(21): Show CTCCCTCCCTCCCTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0041 a0001c0004t0041	a0001c0004t0041g0073 a0001c0004t0041g0073	1	62	0.0161	28	c.395 others(47): Show c.395+38282_395+38283insCTCCCTCCCTCCTTCCTTCCTTCCTT CC	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20307160	C C	CTCCCTCC others(21): Show CTCCCTCCCTCCTTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00558.hp2 HG00642.hp2 others(12): Show HG00423.hp2 HG00558.hp2 HG00642.hp2 HG00738.hp1 HG01106.hp1 HG01109.hp2 HG01261.hp2 HG01978.hp1 HG02015.hp2 HG02083.hp1 HG02155.hp1 HG02165.hp1 HG04228.hp1 NA18952.hp2 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0015 a0001c0001t0039 a0001c0002t0001 a0001c0002t0002 a0001c0003t0001 a0001c0003t0028 a0001c0003t0050	a0001c0001t0001g0039 a0001c0001t0001g0108 a0001c0001t0002g0117 others(12): Show a0001c0001t0001g0039 a0001c0001t0001g0108 a0001c0001t0002g0117 a0001c0001t0005g0137 a0001c0001t0015g0002 a0001c0001t0015g0096 a0001c0001t0039g0142 a0001c0002t0001g0076 a0001c0002t0001g0116 a0001c0002t0002g0075 a0001c0002t0002g0077 a0001c0002t0002g0112 a0001c0003t0001g0098 a0001c0003t0028g0013 a0001c0003t0050g0114	15	76	0.1974	28	c.395 others(47): Show c.395+38282_395+38283insCTCCCTCCTTCCTTCCTTCCTTCCTT CC	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20307160	C C	CTCCCTCC others(21): Show CTCCCTCCTTCCTTCCTTCCTTCCTTCCT	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02886.hp2 HG01255.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0002t0022 a0001c0001t0009 a0001c0002t0022	a0001c0001t0009g0146 a0001c0002t0022g0120 a0001c0001t0009g0146 a0001c0002t0022g0120	2	63	0.0317	28	c.395 others(47): Show c.395+38282_395+38283insCTCCTTCCTTCCTTCCTTCCTTCCTT CC	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20388893	T T	TATATAAT others(21): Show TATATAATATATATAATATATATAATATA	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0002 a0001c0004t0002	a0001c0004t0002g0124 a0001c0004t0002g0124	1	226	0.0044	28	c.396 others(47): Show c.396-78854_396-78853insATATATATAATATATATAATATAATA TA	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20417436	G G	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0066	a0001c0001t0066g0035 a0001c0001t0066g0035	1	140	0.0071	28	c.396 others(47): Show c.396-50294_396-50293insTATATATATATATATATATATATATA TA	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20417436	G G	GTGTATAT others(21): Show GTGTATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0060 a0001c0001t0003g0060	1	140	0.0071	28	c.396 others(47): Show c.396-50315_396-50314insGTATATATATATATATATATATATAT AT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	4/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20472620	C C	CGATATAT others(21): Show CGATATATATAGATATATCGATATATATA	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0066 a0001c0002t0002g0066	1	79	0.0127	28	c.467 others(45): Show c.467+4804_467+4805insATAGATATATCGATATATATAGATATAT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	5/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20472620	C C	CGATATAT others(21): Show CGATATATCTATATATATCGATATATATA	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0188 a0001c0001t0030g0188	1	79	0.0127	28	c.467 others(45): Show c.467+4798_467+4825dupGATATATCTATATATATCGATATATATA	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	5/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20472638	C C	CGATATAT others(21): Show CGATATATATCGATATATCGATATATATA	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp2 others(25): Show HG00099.hp1 HG00099.hp2 HG00323.hp2 HG00639.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01516.hp2 HG01934.hp1 HG02055.hp2 HG02083.hp1 HG03195.hp2 HG03579.hp2 HG03710.hp2 HG03942.hp1 HG04184.hp1 HG06807.hp1 NA18952.hp1 NA18990.hp1 NA19030.hp2 NA19043.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(17): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0008 a0001c0002t0012 a0001c0002t0016 a0001c0002t0031 a0001c0002t0062 a0001c0003t0001 a0001c0003t0006 a0001c0019t0040	a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0071 others(25): Show a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0071 a0001c0001t0001g0105 a0001c0001t0001g0135 a0001c0001t0002g0062 a0001c0001t0002g0117 a0001c0001t0002g0143 a0001c0001t0003g0091 a0001c0001t0003g0103 a0001c0001t0004g0228 a0001c0001t0007g0165 a0001c0001t0007g0178 a0001c0001t0015g0046 a0001c0001t0018g0226 a0001c0001t0019g0164 a0001c0001t0020g0130 a0001c0002t0001g0078 a0001c0002t0002g0121 a0001c0002t0004g0208 a0001c0002t0008g0186 a0001c0002t0012g0209 a0001c0002t0016g0052 a0001c0002t0031g0201 a0001c0002t0062g0020 a0001c0003t0001g0098 a0001c0003t0006g0141 a0001c0019t0040g0045	28	147	0.1905	28	c.467 others(45): Show c.467+4824_467+4825insCGATATATCGATATATATAGATATATAT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	5/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT3_chr5_168656740_169306139	168746798	G G	GTGGTGTG others(21): Show GTGGTGTGTGGTGGTGTGGGTGTGGCGGT	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01192.hp1 HG01192.hp2 others(23): Show HG00735.hp2 HG01192.hp1 HG01192.hp2 HG01433.hp1 HG01496.hp2 HG01993.hp2 HG02071.hp1 HG02135.hp1 HG02451.hp2 HG02486.hp2 HG02615.hp1 HG02717.hp1 HG03017.hp1 HG03139.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG04115.hp2 NA18747.hp2 NA18970.hp2 NA18974.hp2 NA18989.hp2 NA19012.hp1 NA19056.hp1 NA19060.hp2 NA19066.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0001c0003 a0001c0006 others(13): Show a0001c0001 a0001c0003 a0001c0006 a0001c0007 a0001c0009 a0001c0014 a0001c0054 a0001c0058 a0001c0059 a0002c0011 a0002c0043 a0002c0060 a0003c0033 a0003c0056 a0004c0025 a0006c0034	a0001c0001t0001 a0001c0001t0003 a0001c0003t0004 others(16): Show a0001c0001t0001 a0001c0001t0003 a0001c0003t0004 a0001c0003t0007 a0001c0006t0002 a0001c0007t0001 a0001c0009t0001 a0001c0014t0002 a0001c0014t0009 a0001c0054t0002 a0001c0058t0009 a0001c0059t0004 a0002c0011t0007 a0002c0043t0027 a0002c0060t0001 a0003c0033t0007 a0003c0056t0001 a0004c0025t0006 a0006c0034t0012	a0001c0001t0001g0006 a0001c0001t0001g0018 a0001c0001t0001g0019 others(23): Show a0001c0001t0001g0006 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0034 a0001c0001t0001g0092 a0001c0001t0003g0099 a0001c0001t0003g0110 a0001c0003t0004g0045 a0001c0003t0007g0098 a0001c0006t0002g0039 a0001c0007t0001g0095 a0001c0009t0001g0057 a0001c0009t0001g0059 a0001c0014t0002g0028 a0001c0014t0009g0121 a0001c0054t0002g0044 a0001c0058t0009g0097 a0001c0059t0004g0027 a0002c0011t0007g0116 a0002c0043t0027g0052 a0002c0060t0001g0058 a0003c0033t0007g0108 a0003c0056t0001g0078 a0004c0025t0006g0013 a0006c0034t0012g0046	26	125	0.2080	28	c.227 others(47): Show c.2270+1503_2270+1504insACCGCCACACCCACACCACCACACAC CA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168884549	G G	GATATATA others(21): Show GATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0043 a0001c0006t0002g0043	1	5	0.2000	28	c.414 others(45): Show c.414-1241_414-1214dupATATATATATATATATATATATATATAT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168897646	G G	GCGTGCAC others(21): Show GCGTGCACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	HG04115.hp1 NA20805.hp1 HG04115.hp1 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0010 a0002c0008 a0001c0010 a0002c0008	a0001c0010t0008 a0002c0008t0002 a0001c0010t0008 a0002c0008t0002	a0001c0010t0008g0068 a0002c0008t0002g0023 a0001c0010t0008g0068 a0002c0008t0002g0023	2	43	0.0465	28	c.414 others(47): Show c.414-14311_414-14310insTGTGTGTGTGTGTGTGTGTGTGTGCA CG	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168967437	C C	CCTTTTTT others(21): Show CCTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0095 a0001c0007t0001g0095	1	10	0.1000	28	c.414 others(47): Show c.414-84102_414-84101insAAAAAAAAAAAAAAAAAAAAAAAAAA AG	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168967437	C C	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01255.hp2 HG02027.hp2 others(1): Show HG00408.hp2 HG01255.hp2 HG02027.hp2 NA19060.hp1	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0001c0003 a0002c0012 others(1): Show a0001c0001 a0001c0003 a0002c0012 a0008c0035	a0001c0001t0001 a0001c0003t0031 a0002c0012t0004 others(1): Show a0001c0001t0001 a0001c0003t0031 a0002c0012t0004 a0008c0035t0004	a0001c0001t0001g0072 a0001c0003t0031g0026 a0002c0012t0004g0037 others(1): Show a0001c0001t0001g0072 a0001c0003t0031g0026 a0002c0012t0004g0037 a0008c0035t0004g0049	4	13	0.3077	28	c.414 others(47): Show c.414-84102_414-84101insAAAAAAAAAAAAAAAAAAAAAAAAAA AA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168972337	A A	ATGTGTGT others(21): Show ATGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02896.hp1 NA19066.hp2 HG01255.hp2 HG02896.hp1 NA19066.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0010c0023 a0001c0001 a0010c0023	a0001c0001t0001 a0010c0023t0005 a0001c0001t0001 a0010c0023t0005	a0001c0001t0001g0041 a0001c0001t0001g0072 a0010c0023t0005g0085 a0001c0001t0001g0041 a0001c0001t0001g0072 a0010c0023t0005g0085	3	6	0.5000	28	c.414 others(47): Show c.414-89029_414-89002dupCACACACACACACACACACACACACA CA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLITRK3_chr3_165181720_165201384	165196897	G G	GTCTCTCT others(21): Show GTCTCTCTCTCTCTCTCTCTCTCTCTCTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp2 NA18951.hp2 NA19005.hp2 others(2): Show HG00280.hp2 NA18951.hp2 NA19005.hp2 NA19009.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0039 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0039 a0002c0002t0002	a0001c0001t0001g0003 a0001c0001t0002g0001 a0001c0001t0039g0127 others(1): Show a0001c0001t0001g0003 a0001c0001t0002g0001 a0001c0001t0039g0127 a0002c0002t0002g0024	5	57	0.0877	28	c.-13 others(39): Show c.-1367_-1340dupGAGAGAGAGAGAGAGAGAGAGAGAGAGA	SLITRK3	ENSG00000121871.4	transcript	ENST00000475390.2	protein_coding		514		chr3	TogoVar
SLMAP_chr3_57751309_57935003	57869630	T T	TTATATGT others(21): Show TTATATGTATGTATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0305 a0001c0001t0033g0305	1	63	0.0159	28	c.123 others(47): Show c.1238-2001_1238-2000insGTATGTATATATATATATATATATAT AT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57906300	C C	CTTTTTTT others(21): Show CTTTTTTTTCTTTTCCTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0055 a0001c0001t0002g0055	1	241	0.0041	28	c.150 others(47): Show c.1502-1576_1502-1575insCTTTTCCTTTTTTTTTTTTTTTTTTT TT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	17/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57906300	C C	CTTTTTTT others(21): Show CTTTTTTTTCTTTTTCTTTTTCTTTTTTT	intron_variant intron_variant	MODIFIER	HG03704.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0030 a0001c0001t0002g0030	1	241	0.0041	28	c.150 others(47): Show c.1502-1576_1502-1575insCTTTTTCTTTTTCTTTTTTTTTTTTT TT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	17/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57906300	C C	CTTTTTTT others(21): Show CTTTTTTTTCTTTTTCTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00609.hp1 NA18950.hp1 others(6): Show HG00438.hp1 HG00609.hp1 NA18950.hp1 NA18981.hp1 NA18994.hp1 NA18999.hp1 NA19054.hp2 NA19065.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0002 a0001c0006t0002 a0001c0001t0002 a0001c0006t0002	a0001c0001t0002g0012 a0001c0001t0002g0025 a0001c0001t0002g0029 others(6): Show a0001c0001t0002g0012 a0001c0001t0002g0025 a0001c0001t0002g0029 a0001c0001t0002g0036 a0001c0001t0002g0039 a0001c0001t0002g0041 a0001c0001t0002g0045 a0001c0001t0002g0062 a0001c0006t0002g0064	9	249	0.0361	28	c.150 others(47): Show c.1502-1576_1502-1575insCTTTTTCTTTTTTTTTTTTTTTTTTT TT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	17/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLTM_chr15_58874050_58938679	58882181	C C	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01109.hp2 HG01515.hp1 others(9): Show HG01081.hp1 HG01109.hp2 HG01515.hp1 HG02165.hp2 HG02280.hp2 HG02647.hp1 HG02970.hp1 HG03098.hp1 HG03239.hp1 HG03516.hp2 HG04199.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0283 others(7): Show a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0283 a0001c0001t0002g0288 a0001c0001t0002g0326 a0001c0001t0002g0351 a0001c0001t0002g0352 a0001c0002t0001g0089 a0001c0002t0001g0091 a0001c0002t0001g0106	12	42	0.2857	28	c.299 others(47): Show c.2996+1444_2996+1445insTTTTTTTTTTTTTTTTTTTTTTTTTT TT	SLTM	ENSG00000137776.17	transcript	ENST00000380516.7	protein_coding	20/20			chr15	TogoVar

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