Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATATTTT	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0243 a0001c0001t0001g0243	1	27	0.0370	30	c.640 others(47): Show c.640+3083_640+3084insAAAATATATATATATATATATATATATA TA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(23): Show ATATATATATATATATATATATATATTTTTT	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0248 a0001c0001t0001g0248	1	27	0.0370	30	c.640 others(47): Show c.640+3083_640+3084insAAAAAATATATATATATATATATATATA TA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(23): Show ATATATATATATATATATATATATTTTTTTT	intron_variant intron_variant	MODIFIER	HG00733.hp1 NA18983.hp1 HG00733.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0238 a0001c0001t0001g0307 a0001c0001t0001g0238 a0001c0001t0001g0307	2	28	0.0714	30	c.640 others(47): Show c.640+3083_640+3084insAAAAAAAATATATATATATATATATATA TA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(23): Show ATATATATATATATATATATTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0290 a0001c0001t0001g0290	1	27	0.0370	30	c.640 others(47): Show c.640+3083_640+3084insAAAAAAAAAAAATATATATATATATATA TA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSG101_chr11_18475311_18531942	18499402	A A	ATATATAT others(23): Show ATATATATATATATATATTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA19011.hp2 NA20300.hp1 NA19011.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0237 a0001c0001t0001g0269 a0001c0001t0001g0237 a0001c0001t0001g0269	2	28	0.0714	30	c.640 others(47): Show c.640+3083_640+3084insAAAAAAAAAAAAAATATATATATATATA TA	TSG101	ENSG00000074319.13	transcript	ENST00000251968.4	protein_coding	7/9			chr11	TogoVar
TSGA13_chr7_130663643_130691545	130690404	T T	TTCCTTCT others(23): Show TTCCTTCTTTCTTTCTTTCTTTCTTTCTTTC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0160 a0001c0001t0001g0160	1	384	0.0026	30	c.-42 others(41): Show c.-4294_-4293insGAAAGAAAGAAAGAAAGAAAGAAAGAAGGA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3860		chr7	TogoVar
TSGA13_chr7_130663643_130691545	130690438	C C	CTTTCTTT others(23): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	358	0.0028	30	c.-43 others(41): Show c.-4328_-4327insAGGAAAGAAAGAAAGAAAGAAAGAAAGAAA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3894		chr7	TogoVar
TSGA13_chr7_130663643_130691545	130690450	C C	CTTTCTTT others(23): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCCT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp1 NA18945.hp2 NA19068.hp2 HG01168.hp1 NA18945.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0116 a0001c0001t0001g0016 a0001c0001t0001g0116	3	307	0.0098	30	c.-43 others(41): Show c.-4340_-4339insAGGAAAGAAAGAAAGAAAGAAAGAAAGAAA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3906		chr7	TogoVar
TSHR_chr14_80950621_81151306	81067927	C C	CTATATAT others(23): Show CTATATATATATATATATATATATATATATA	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02698.hp2 HG02970.hp1 others(5): Show HG02647.hp2 HG02698.hp2 HG02970.hp1 HG02976.hp2 NA18948.hp1 NA18956.hp2 NA19007.hp1 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 others(2): Show a0001c0001t0005 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0005	a0001c0001t0005g0060 a0001c0001t0005g0108 a0001c0002t0001g0149 others(5): Show a0001c0001t0005g0060 a0001c0001t0005g0108 a0001c0002t0001g0149 a0001c0002t0002g0034 a0001c0002t0002g0142 a0001c0002t0004g0053 a0001c0002t0005g0065 a0001c0002t0005g0245	8	49	0.1633	30	c.243 others(45): Show c.243-300_243-299insATATATATATATATATATATATATATATAT	TSHR	ENSG00000165409.18	transcript	ENST00000298171.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr14	TogoVar
TSHZ1_chr18_75205797_75294944	75246403	G G	GGTGTGTG others(23): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	intron_variant intron_variant	MODIFIER	HG02293.hp1 NA18982.hp2 HG02293.hp1 NA18982.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0008 a0002c0002 a0003c0008	a0002c0002t0002 a0003c0008t0001 a0002c0002t0002 a0003c0008t0001	a0002c0002t0002g0045 a0003c0008t0001g0170 a0002c0002t0002g0045 a0003c0008t0001g0170	2	9	0.2222	30	c.40+ others(47): Show c.40+34500_40+34529dupGTGTGTGTGTGTGTGTGTGTGTGTGTGT GT	TSHZ1	ENSG00000179981.11	transcript	ENST00000580243.3	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr18	TogoVar
TSHZ2_chr20_52967358_53500330	53500248	G G	GTATATAT others(23): Show GTATATATGTATGTGTATATATATATGTGTA	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20805.hp1 NA20805.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0074 a0001c0002t0002g0074	1	174	0.0057	30	c.13 others(43): Show c.13113_*13114insTATATATGTATGTGTATATATATATGTGTA	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding		4919		chr20	TogoVar
TSLP_chr5_111066713_111083026	111078749	T T	TTGGTGTG others(23): Show TTGGTGTGTTAAGTTAAGCTGGGTTTTTAAG	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0029	1	470	0.0021	30	c.26 others(41): Show c.2675_*2676insTGGTGTGTTAAGTTAAGCTGGGTTTTTAAG	TSLP	ENSG00000145777.15	transcript	ENST00000344895.4	protein_coding		724		chr5	TogoVar
TSNARE1_chr8_142207080_142408182	142343779	A A	AGGAGGAG others(23): Show AGGAGGAGGAGGGGGAGGAAGAGGAGGAGGG	intron_variant intron_variant	MODIFIER	HG02155.hp1 NA18967.hp1 HG02155.hp1 NA18967.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0002 a0006c0006t0002	a0006c0006t0002g0018 a0006c0006t0002g0069 a0006c0006t0002g0018 a0006c0006t0002g0069	2	153	0.0131	30	c.745 others(45): Show c.745+186_745+187insCCCTCCTCCTCTTCCTCCCCCTCCTCCTCC	TSNARE1	ENSG00000171045.16	transcript	ENST00000524325.6	protein_coding	4/13			chr8	TogoVar
TSNARE1_chr8_142207080_142408182	142343779	A A	AGGAGGAG others(23): Show AGGAGGAGGAGGGGGAGGAGGAGGAGGAGGG	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00673.hp2 HG02040.hp1 others(4): Show HG00423.hp2 HG00673.hp2 HG02040.hp1 HG02896.hp1 HG03098.hp2 HG03225.hp1 HG03831.hp1	a0005 a0006 a0005 a0006	a0005c0009 a0006c0006 a0005c0009 a0006c0006	a0005c0009t0002 a0006c0006t0001 a0006c0006t0002 a0005c0009t0002 a0006c0006t0001 a0006c0006t0002	a0005c0009t0002g0234 a0005c0009t0002g0235 a0006c0006t0001g0159 others(4): Show a0005c0009t0002g0234 a0005c0009t0002g0235 a0006c0006t0001g0159 a0006c0006t0001g0231 a0006c0006t0001g0236 a0006c0006t0002g0221 a0006c0006t0002g0228	7	158	0.0443	30	c.745 others(45): Show c.745+186_745+187insCCCTCCTCCTCCTCCTCCCCCTCCTCCTCC	TSNARE1	ENSG00000171045.16	transcript	ENST00000524325.6	protein_coding	4/13			chr8	TogoVar
TSNAX_chr1_231523669_231571524	231532131	A A	AACACACA others(23): Show AACACACACACACACACACACACACACACAC	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0328 a0001c0001t0001g0328	1	24	0.0417	30	c.121 others(47): Show c.121+2798_121+2827dupCACACACACACACACACACACACACACA CA	TSNAX	ENSG00000116918.15	transcript	ENST00000366639.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
TSPAN15_chr10_69446465_69512666	69455606	T T	TTCTTTCT others(23): Show TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03710.hp2 HG03927.hp1 HG03239.hp1 HG03710.hp2 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0012 a0001c0001t0006 a0001c0001t0012	a0001c0001t0006g0247 a0001c0001t0006g0248 a0001c0001t0012g0249 a0001c0001t0006g0247 a0001c0001t0006g0248 a0001c0001t0012g0249	3	270	0.0111	30	c.96+ others(45): Show c.96+3919_96+3920insTTCTTTCTTTCTTTCTTTCTTTCTTTCTCT	TSPAN15	ENSG00000099282.10	transcript	ENST00000373290.7	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
TSPAN18_chr11_44721962_44937423	44802609	G G	GCACACAC others(23): Show GCACACACACACACACACACACACACACACA	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0090 a0001c0001t0090	a0001c0001t0090g0128 a0001c0001t0090g0128	1	85	0.0118	30	c.-15 others(51): Show c.-153+38125_-153+38126insCACACACACACACACACACACACA CACACA	TSPAN18	ENSG00000157570.12	transcript	ENST00000520358.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr11	TogoVar
TSPAN5_chr4_98465367_98663611	98533543	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	41	0.0244	30	c.82- others(47): Show c.82-25816_82-25815insAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA	TSPAN5	ENSG00000168785.8	transcript	ENST00000305798.8	protein_coding	1/7			chr4	TogoVar
TSPAN9_chr12_3072379_3291559	3105774	A A	ACACACGC others(23): Show ACACACGCGCACACGCTCATACACACTCACG	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00323.hp1 HG00408.hp1 others(17): Show HG00099.hp1 HG00323.hp1 HG00408.hp1 HG00642.hp1 HG01081.hp2 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01261.hp2 HG02132.hp1 HG02257.hp1 HG02735.hp2 HG03239.hp1 HG03491.hp1 HG03710.hp1 NA18747.hp2 NA18944.hp1 NA18983.hp2 NA19002.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0034 a0001c0001t0081 a0001c0002t0066 a0001c0002t0098 a0001c0002t0100 a0001c0003t0033	a0001c0001t0001g0215 a0001c0001t0001g0235 a0001c0001t0001g0237 others(17): Show a0001c0001t0001g0215 a0001c0001t0001g0235 a0001c0001t0001g0237 a0001c0001t0001g0240 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0002g0236 a0001c0001t0002g0245 a0001c0001t0003g0104 a0001c0001t0005g0021 a0001c0001t0006g0252 a0001c0001t0007g0196 a0001c0001t0009g0027 a0001c0001t0034g0249 a0001c0001t0034g0250 a0001c0001t0081g0197 a0001c0002t0066g0103 a0001c0002t0098g0198 a0001c0002t0100g0243 a0001c0003t0033g0093	20	143	0.1399	30	c.-18 others(49): Show c.-18+22062_-18+22063insGCACACGCTCATACACACTCACGCAC ACGC	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPAN9_chr12_3072379_3291559	3214662	A A	ACACGCCC others(23): Show ACACGCCCTCCCCCCTGCAGGGGAGGGCCTT	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0058 a0001c0004t0058	a0001c0004t0058g0013 a0001c0004t0058g0013	1	286	0.0035	30	c.63+ others(47): Show c.63+13416_63+13445dupCCCCCTGCAGGGGAGGGCCTTCACGCCC TC	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPAN9_chr12_3072379_3291559	3251441	G G	GAAGTTCT others(23): Show GAAGTTCTTTTTTCAAAAGTTCTTTTTTCAA	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG06807.hp2 HG01358.hp2 HG06807.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0039 a0001c0004t0059 a0001c0004t0039 a0001c0004t0059	a0001c0004t0039g0285 a0001c0004t0059g0097 a0001c0004t0039g0285 a0001c0004t0059g0097	2	278	0.0072	30	c.64- others(47): Show c.64-26974_64-26945dupCTTTTTTCAAAAGTTCTTTTTTCAAAAG TT	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPEAR_chr21_44492893_44716572	44504403	C C	CGGGGGGT others(23): Show CGGGGGGTAGCTGGCCTCGGTGAGCCCACAG	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0014 a0001c0003t0014	a0001c0003t0014g0013 a0001c0003t0014g0013	1	292	0.0034	30	c.185 others(47): Show c.1856+376_1856+377insCTGTGGGCTCACCGAGGCCAGCTACCCC CC	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	11/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44599134	T T	TTCTCTCT others(23): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	intron_variant intron_variant	MODIFIER	HG00423.hp2 NA19091.hp2 HG00423.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0281 a0001c0001t0001g0069 a0001c0001t0001g0281	2	11	0.1818	30	c.83- others(47): Show c.83-31159_83-31130dupGAGAGAGAGAGAGAGAGAGAGAGAGAGA GA	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44599171	T T	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC	intron_variant intron_variant	MODIFIER	NA19087.hp1 NA19087.hp1	a0007 a0007	a0007c0012 a0007c0012	a0007c0012t0001 a0007c0012t0001	a0007c0012t0001g0042 a0007c0012t0001g0042	1	292	0.0034	30	c.83- others(47): Show c.83-31167_83-31166insGGAGAGAGAGAGAGAGAGAGAGAGAGAG AG	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44689708	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01517.hp1 HG02886.hp1 HG03492.hp2 others(2): Show HG01517.hp1 HG02886.hp1 HG03492.hp2 NA18906.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0160 a0001c0001t0001g0246 a0001c0001t0001g0276 others(2): Show a0001c0001t0001g0160 a0001c0001t0001g0246 a0001c0001t0001g0276 a0001c0001t0001g0280 a0001c0001t0001g0291	5	166	0.0301	30	c.82+ others(47): Show c.82+21724_82+21725insATATATATATATATATATATATATATAT AT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44689712	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02572.hp2 HG02896.hp2 others(2): Show HG02559.hp2 HG02572.hp2 HG02896.hp2 HG02976.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0001 a0001c0001t0003 a0001c0001t0005	a0001c0001t0001g0012 a0001c0001t0001g0093 a0001c0001t0001g0104 others(2): Show a0001c0001t0001g0012 a0001c0001t0001g0093 a0001c0001t0001g0104 a0001c0001t0003g0222 a0001c0001t0005g0007	5	86	0.0581	30	c.82+ others(47): Show c.82+21720_82+21721insATATATATATATATATATATATATATAT AT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44689712	A A	AATGAATA others(23): Show AATGAATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00639.hp2 HG01123.hp1 others(1): Show HG00438.hp1 HG00639.hp2 HG01123.hp1 HG01346.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0278 others(1): Show a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0278 a0002c0002t0001g0108	4	85	0.0471	30	c.82+ others(47): Show c.82+21720_82+21721insATATATATATATATATATATATATATTC AT	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSR1_chr17_2317396_2341457	2338774	A A	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp2 HG02040.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0001 a0002c0002t0001g0001	1	168	0.0060	30	c.-23 others(41): Show c.-2348_-2347insATATATATATATATATATATATATATATAT	TSR1	ENSG00000167721.11	transcript	ENST00000301364.10	protein_coding		2318		chr17	TogoVar
TSSC4_chr11_2395750_2408876	2407077	C C	CCTCGGCC others(23): Show CCTCGGCCTCACCCAGGTGCTCCCGCTTGTG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0002 a0003c0003t0001g0002	1	335	0.0030	30	c.34 others(41): Show c.3454_*3455insCTCGGCCTCACCCAGGTGCTCCCGCTTGTG	TSSC4	ENSG00000184281.15	transcript	ENST00000333256.11	protein_coding		3202		chr11	TogoVar
TSSK2_chr22_19126308_19137622	19128634	A A	AAGGGGAG others(23): Show AAGGGGAGGGGAGGGGAGGGGAGGGGAGGGG	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0000 a0003c0004t0001g0000	1	103	0.0097	30	c.-27 others(41): Show c.-2766_-2765insAGGGGAGGGGAGGGGAGGGGAGGGGAGGGG	TSSK2	ENSG00000206203.5	transcript	ENST00000399635.4	protein_coding		2673		chr22	TogoVar
TSSK4_chr14_24200696_24213248	24200998	G G	GTTTTTTT others(23): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp2 NA18971.hp1 NA18986.hp1 HG00609.hp2 NA18971.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	3	307	0.0098	30	c.-49 others(41): Show c.-4926_-4925insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TSSK4	ENSG00000139908.15	transcript	ENST00000339917.10	protein_coding		4697		chr14	TogoVar
TSSK4_chr14_24200696_24213248	24209213	A A	AAAGCTAC others(23): Show AAAGCTACTTGCTCCTTCCATTCCAAGTAGC	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0023	30	c.10 others(41): Show c.1067_*1068insAAGCTACTTGCTCCTTCCATTCCAAGTAGC	TSSK4	ENSG00000139908.15	transcript	ENST00000339917.10	protein_coding		966		chr14	TogoVar
TTC17_chr11_43353920_43499931	43462921	C C	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01257.hp1 HG03540.hp2 HG01243.hp2 HG01257.hp1 HG03540.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0001 a0002c0003t0001 a0002c0003t0002 a0001c0002t0001 a0002c0003t0001 a0002c0003t0002	a0001c0002t0001g0195 a0002c0003t0001g0226 a0002c0003t0002g0218 a0001c0002t0001g0195 a0002c0003t0001g0226 a0002c0003t0002g0218	3	169	0.0178	30	c.303 others(51): Show c.3030+11668_3030+11669insTTTTTTTTTTTTTTTTTTTTTTTT TTTTTT	TTC17	ENSG00000052841.16	transcript	ENST00000039989.9	protein_coding	21/23		INFO_REALIGN_3_PRIME	chr11	TogoVar
TTC21B_chr2_165868362_165958776	165914657	C C	CTGTGTGT others(23): Show CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01261.hp2 HG02080.hp1 others(6): Show HG01099.hp1 HG01261.hp2 HG02080.hp1 HG02717.hp1 HG04204.hp1 NA18954.hp2 NA18986.hp1 NA19084.hp2 NA19091.hp1	a0001 a0003 a0018 a0001 a0003 a0018	a0001c0001 a0003c0003 a0018c0022 a0001c0001 a0003c0003 a0018c0022	a0001c0001t0001 a0001c0001t0003 a0003c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0003 a0003c0003t0001 a0018c0022t0001	a0001c0001t0001g0010 a0001c0001t0001g0326 a0001c0001t0001g0332 others(5): Show a0001c0001t0001g0010 a0001c0001t0001g0326 a0001c0001t0001g0332 a0001c0001t0001g0352 a0001c0001t0003g0159 a0001c0001t0003g0169 a0003c0003t0001g0079 a0018c0022t0001g0304	9	132	0.0682	30	c.213 others(47): Show c.2138+514_2138+543dupCACACACACACACACACACACACACACA CA	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	15/28			chr2	TogoVar
TTC21B_chr2_165868362_165958776	165914676	T T	TGTGTGTG others(23): Show TGTGTGTGTGTGTGTGTGTGTGTGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02970.hp1 HG03041.hp1 HG02622.hp1 HG02970.hp1 HG03041.hp1	a0005 a0015 a0016 a0005 a0015 a0016	a0005c0007 a0015c0016 a0016c0030 a0005c0007 a0015c0016 a0016c0030	a0005c0007t0001 a0015c0016t0001 a0016c0030t0001 a0005c0007t0001 a0015c0016t0001 a0016c0030t0001	a0005c0007t0001g0087 a0015c0016t0001g0084 a0016c0030t0001g0274 a0005c0007t0001g0087 a0015c0016t0001g0084 a0016c0030t0001g0274	3	402	0.0075	30	c.213 others(47): Show c.2138+524_2138+525insGCGCGCGCACACACACACACACACACAC AC	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	15/28			chr2	TogoVar
TTC21B_chr2_165868362_165958776	165914678	T T	TGTGTGTG others(23): Show TGTGTGTGTGTGTGTGTGTGTGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0280 a0001c0001t0001g0280	1	403	0.0025	30	c.213 others(47): Show c.2138+522_2138+523insGCGCGCGCGCACACACACACACACACAC AC	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	15/28			chr2	TogoVar
TTC21B_chr2_165868362_165958776	165914680	T T	TGTGTGTG others(23): Show TGTGTGTGTGTGTGTACGTGCGCGCGCGCGC	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02717.hp2 HG02723.hp2 others(7): Show HG02647.hp1 HG02717.hp2 HG02723.hp2 HG02886.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03471.hp1 HG03486.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0005 a0001c0001t0011 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0011 a0001c0004t0001	a0001c0001t0001g0053 a0001c0001t0001g0063 a0001c0001t0005g0038 others(7): Show a0001c0001t0001g0053 a0001c0001t0001g0063 a0001c0001t0005g0038 a0001c0001t0005g0039 a0001c0001t0005g0046 a0001c0001t0005g0047 a0001c0001t0005g0099 a0001c0001t0011g0072 a0001c0001t0011g0073 a0001c0004t0001g0109	10	328	0.0305	30	c.213 others(47): Show c.2138+520_2138+521insGCGCGCGCGCGCACGTACACACACACAC AC	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	15/28			chr2	TogoVar
TTC21B_chr2_165868362_165958776	165914691	G G	GTGTGTGT others(23): Show GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTC	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02965.hp2 HG03579.hp2 HG02630.hp1 HG02965.hp2 HG03579.hp2	a0001 a0004 a0014 a0001 a0004 a0014	a0001c0024 a0004c0005 a0014c0018 a0001c0024 a0004c0005 a0014c0018	a0001c0024t0001 a0004c0005t0001 a0014c0018t0016 a0001c0024t0001 a0004c0005t0001 a0014c0018t0016	a0001c0024t0001g0108 a0004c0005t0001g0385 a0014c0018t0016g0100 a0001c0024t0001g0108 a0004c0005t0001g0385 a0014c0018t0016g0100	3	396	0.0076	30	c.213 others(47): Show c.2138+509_2138+510insGACACACACACACACACACACACACACA CA	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	15/28			chr2	TogoVar
TTC21B_chr2_165868362_165958776	165947169	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02735.hp2 HG02809.hp1 others(10): Show HG01891.hp1 HG02735.hp2 HG02809.hp1 HG02886.hp1 HG03579.hp2 HG04115.hp2 NA18950.hp1 NA18953.hp1 NA18959.hp2 NA18960.hp1 NA19003.hp2 NA19085.hp1 NA20129.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0004 a0001c0024 others(1): Show a0001c0001 a0001c0004 a0001c0024 a0007c0012	a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0004t0001 a0001c0024t0001 a0007c0012t0001	a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 others(10): Show a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0344 a0001c0001t0001g0345 a0001c0001t0001g0346 a0001c0001t0003g0180 a0001c0004t0001g0109 a0001c0024t0001g0108 a0007c0012t0001g0374	13	17	0.7647	30	c.263 others(47): Show c.263-1480_263-1479insATATATATATATATATATATATATATAT AT	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	3/28			chr2	TogoVar
TTC27_chr2_32623050_32826051	32708304	G G	GTTTTTTT others(23): Show GTTTTTTTTTTTTGTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0001 a0001c0015t0001	a0001c0015t0001g0136 a0001c0015t0001g0136	1	145	0.0069	30	c.123 others(49): Show c.1233+5396_1233+5397insGTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	TTC27	ENSG00000018699.13	transcript	ENST00000317907.9	protein_coding	10/19		INFO_REALIGN_3_PRIME	chr2	TogoVar
TTC27_chr2_32623050_32826051	32708304	G G	GTTTTTTT others(23): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	NA18948.hp1 NA19012.hp2 NA18948.hp1 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0308 a0001c0001t0001g0317 a0001c0001t0001g0308 a0001c0001t0001g0317	2	146	0.0137	30	c.123 others(49): Show c.1233+5406_1233+5407insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	TTC27	ENSG00000018699.13	transcript	ENST00000317907.9	protein_coding	10/19		INFO_REALIGN_3_PRIME	chr2	TogoVar
TTC27_chr2_32623050_32826051	32795725	G G	GTATTATT others(23): Show GTATTATTATTATTATTATTATTATTATTAT	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0217 a0002c0003t0002g0217	1	90	0.0111	30	c.199 others(49): Show c.1998+8578_1998+8607dupATTATTATTATTATTATTATTATTAT TATT	TTC27	ENSG00000018699.13	transcript	ENST00000317907.9	protein_coding	16/19		INFO_REALIGN_3_PRIME	chr2	TogoVar
TTC27_chr2_32623050_32826051	32815223	A A	ATTTTTTT others(23): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	75	0.0133	30	c.230 others(49): Show c.2309-2232_2309-2203dupTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	TTC27	ENSG00000018699.13	transcript	ENST00000317907.9	protein_coding	18/19		INFO_REALIGN_3_PRIME	chr2	TogoVar
TTC28_chr22_27973014_28684840	28018298	T T	TGTGTGTG others(23): Show TGTGTGTGTGTGTGTGTGTGCGCGCGCGCAC	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0033 a0001c0008t0033	a0001c0008t0033g0196 a0001c0008t0033g0196	1	195	0.0051	30	c.407 others(49): Show c.4074-3907_4074-3906insGTGCGCGCGCGCACACACACACACAC ACAC	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	13/22			chr22	TogoVar
TTC28_chr22_27973014_28684840	28032175	T T	TATATATA others(23): Show TATATATATATATAAAATATATATATATAAA	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0037 a0001c0001t0004g0037	1	102	0.0098	30	c.393 others(49): Show c.3933-1839_3933-1810dupTTTATATATATATATTTTATATATAT ATAT	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	12/22			chr22	TogoVar
TTC28_chr22_27973014_28684840	28352312	C C	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03471.hp2 HG03098.hp2 HG03471.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0014 a0002c0006t0021 a0002c0006t0014 a0002c0006t0021	a0002c0006t0014g0004 a0002c0006t0021g0006 a0002c0006t0014g0004 a0002c0006t0021g0006	2	40	0.0500	30	c.382 others(49): Show c.382-45670_382-45669insATATATATATATATATATATATATAT ATAT	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	2/22			chr22	TogoVar
TTC28_chr22_27973014_28684840	28371509	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01943.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0150 a0001c0003t0002g0150	1	14	0.0714	30	c.382 others(49): Show c.382-64867_382-64866insTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	2/22			chr22	TogoVar
TTC28_chr22_27973014_28684840	28371590	A A	ATTTTTTT others(23): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01928.hp2 HG02717.hp1 others(1): Show HG01255.hp1 HG01928.hp2 HG02717.hp1 NA18983.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0005c0028 a0001c0001 a0001c0002 a0005c0028	a0001c0001t0013 a0001c0002t0007 a0005c0028t0023 a0001c0001t0013 a0001c0002t0007 a0005c0028t0023	a0001c0001t0013g0127 a0001c0002t0007g0102 a0001c0002t0007g0122 others(1): Show a0001c0001t0013g0127 a0001c0002t0007g0102 a0001c0002t0007g0122 a0005c0028t0023g0133	4	82	0.0488	30	c.382 others(49): Show c.382-64948_382-64947insAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	2/22			chr22	TogoVar
TTC28_chr22_27973014_28684840	28386274	C C	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0069 a0001c0004t0001g0069	1	13	0.0769	30	c.382 others(49): Show c.382-79661_382-79632dupTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	2/22			chr22	TogoVar
TTC28_chr22_27973014_28684840	28537293	A A	AAAAATAA others(23): Show AAAAATAAAATAAAATAAAATAAAATAAAAT	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0041 a0001c0001t0037g0041	1	112	0.0089	30	c.381 others(49): Show c.381+92229_381+92258dupATTTTATTTTATTTTATTTTATTTTA TTTT	TTC28	ENSG00000100154.15	transcript	ENST00000397906.7	protein_coding	2/22			chr22	TogoVar

Search by Variant

Search

Search Results